MD01G1048000.v1.1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
15067947 .. 15069463
1517 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1048000.v1.1.491

Sequence Viewer

Length: 1077 bp
ATGGCTTTGAGTAATGGTGAAGTGGGTGCCACTTGCCATGAGCTTCTCGGAGCTCAAGCTCATGTTTGGAACCACATCTTCCAGTTCATAAACTCCATGTCACTCAAATGTGCAGTTCAACTTGGCATCCCGGATGTGATTTACAACCATGGCCAACCCATCTCTCTTTTCGAGCTTATCGCCGGGCTCAATGTCCACCCTTCGAAAGCTCATTTCATCTCACGCCTCATGCGGATCCTCGTTCACTCCGATTTCTTTGCACAACATCATCATGTTCATCATAATCATGACAATGTGGAGGAAGAAGAAGCTGTTGTATTGTATAGCCTAACACCGGCTTCCGGGCTTTTTCTCGAAGACGGGCCATTAAACACCACACCATTTTTACTCATGATACTTGATCCGGTAATGACAGACCCATTTCACTCAATGGGCGCTTGGTTACAGATGAATGGTGGCGATGATCTAGTTCCACGTACACCATTTGAGCAATGGAAGCGGACTCCAAACTTATCGCAAAGGGCGGTGGTGGAAGAGTGTGGAGGAGTTTTTGAGGGTTTGAAATCCCTGGTGGATGTTGGAGGGGGTACAGGAACAATGGCCAAAGCCATTGCCAATGCATTCCCCAACATCAACTGCACAGTGTTTGACCAGCCATATGTGGTGGCTGACTTGGAAGGGACGACCCATAATTTGGGTTTTATGGGAGGAGACATGTTTGATAAAATACCTCCAGCCAATGCAATTCTGCTCAAGTGGATTCTGCATGATTGGAATGATGAAGAAAGCGTGAAGATATTGAAGAAGTGTAGAGAAGCAATGCTTCAGAGCAAAAATGAAGGAAGGAAGAAGATTATCATCATAGACATAGTTGTGGGGTATGTCAATAACAAGATGCTTATGGATAAGAAATCAATTGAAACCCAACTCATGCTCGATATGTTGATGATGTCCACCGTCACCAGCAAAGAGCGTAGCGAATCAGAATGGGAGAAGATCTTTCTGGCTGCTGGATTCACTCACTACAACATCACTCATACGCTTGGTTTGAGGTCTCTTATTGAAGTTTACCTCTGA

Protein Analysis

359

Amino Acids

40.05

Weight (kDa)

5.65

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dimerisation PF08100 23 - 119 3.1e-17 O-methyltransferase dimerisation domain
Methyltransf_2 PF00891 168 - 339 1e-39 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 26
AccB7I CCANNNNNTGG 1 cut(s) 694
AciI CCGC 3 cut(s) 232, 499, 524
AclWI GGATC 3 cut(s) 229, 242, 395
AcoI YGGCCR 2 cut(s) 151, 600
AcuI CTGAAG 1 cut(s) 809
AfaI GTAC 2 cut(s) 478, 589
AfiI CCNNNNNNNGG 3 cut(s) 334, 341, 694
AflIII ACRYGT 1 cut(s) 714
AgsI TTSAA 5 cut(s) 119, 562, 802, 920, 1064
AjnI CCWGG 1 cut(s) 567
AluBI AGCT 6 cut(s) 43, 53, 59, 175, 209, 311
AluI AGCT 6 cut(s) 43, 53, 59, 175, 209, 311
Alw21I GWGCWC 1 cut(s) 55
Alw26I GTCTC 2 cut(s) 705, 1059
AlwI GGATC 3 cut(s) 229, 242, 395
AoxI GGCC 3 cut(s) 151, 362, 600
ApeKI GCWGC 1 cut(s) 1007
ArsI GACNNNNNNTTYG 2 cut(s) 676, 708
AspLEI GCGC 1 cut(s) 437
AspS9I GGNCC 1 cut(s) 362
AsuC2I CCSGG 3 cut(s) 131, 184, 343
AsuHPI GGTGA 2 cut(s) 29, 952
AsuII TTCGAA 1 cut(s) 203
BalI TGGCCA 2 cut(s) 153, 602
BamHI GGATCC 1 cut(s) 234
BanI GGYRCC 1 cut(s) 26
BanII GRGCYC 2 cut(s) 55, 189
BbsI GAAGAC 1 cut(s) 363
Bbv12I GWGCWC 1 cut(s) 55
BbvI GCAGC 1 cut(s) 994
BccI CCATC 1 cut(s) 167
BcgI CGANNNNNNTGC 2 cut(s) 239, 273
BciT130I CCWGG 1 cut(s) 569
BcnI CCSGG 3 cut(s) 131, 184, 343
BcoDI GTCTC 2 cut(s) 705, 1059
BfaI CTAG 1 cut(s) 467
BfoI RGCGCY 1 cut(s) 438
BglII AGATCT 1 cut(s) 996
BisI GCNGC 1 cut(s) 1008
BlsI GCNGC 1 cut(s) 1009
Bme1390I CCNGG 4 cut(s) 131, 184, 343, 569
BmgT120I GGNCC 1 cut(s) 362
BmiI GGNNCC 3 cut(s) 28, 71, 236
BmrFI CCNGG 4 cut(s) 131, 184, 343, 569
BmsI GCATC 2 cut(s) 135, 885
BpiI GAAGAC 1 cut(s) 363
BpmI CTGGAG 1 cut(s) 717
Bpu14I TTCGAA 1 cut(s) 203
BpuEI CTTGAG 2 cut(s) 39, 737
BpuMI CCSGG 3 cut(s) 131, 184, 343
BsaAI YACGTR 1 cut(s) 476
BsaBI GATNNNNATC 1 cut(s) 857
BsaI GGTCTC 1 cut(s) 1059
BsaJI CCNNGG 2 cut(s) 148, 567
BsaWI WCCGGW 1 cut(s) 403
Bsc4I CCNNNNNNNGG 3 cut(s) 334, 341, 694
Bse118I RCCGGY 1 cut(s) 334
Bse1I ACTGG 1 cut(s) 82
Bse3DI GCAATG 3 cut(s) 497, 609, 825
Bse8I GATNNNNATC 1 cut(s) 857
BseBI CCWGG 1 cut(s) 569
BseDI CCNNGG 2 cut(s) 148, 567
BseGI GGATG 3 cut(s) 126, 139, 580
BseJI GATNNNNATC 1 cut(s) 857
BseLI CCNNNNNNNGG 3 cut(s) 334, 341, 694
BseMI GCAATG 3 cut(s) 497, 609, 825
BseNI ACTGG 1 cut(s) 82
BseRI GAGGAG 2 cut(s) 558, 723
BseXI GCAGC 1 cut(s) 994
BsgI GTGCAG 2 cut(s) 132, 622
BshFI GGCC 3 cut(s) 153, 364, 602
BshNI GGYRCC 1 cut(s) 26
BsiHKAI GWGCWC 1 cut(s) 55
BsiSI CCGG 5 cut(s) 131, 183, 335, 342, 404
BslFI GGGAC 1 cut(s) 694
BslI CCNNNNNNNGG 3 cut(s) 334, 341, 694
BsmAI GTCTC 2 cut(s) 705, 1059
BsmFI GGGAC 1 cut(s) 694
BsmI GAATGC 1 cut(s) 620
BsnI GGCC 3 cut(s) 153, 364, 602
Bso31I GGTCTC 1 cut(s) 1059
Bsp119I TTCGAA 1 cut(s) 203
Bsp1286I GDGCHC 2 cut(s) 55, 189
Bsp143I GATC 4 cut(s) 234, 400, 463, 996
Bsp19I CCATGG 1 cut(s) 148
BspACI CCGC 3 cut(s) 232, 499, 524
BspANI GGCC 3 cut(s) 153, 364, 602
BspHI TCATGA 2 cut(s) 286, 390
BspLI GGNNCC 3 cut(s) 28, 71, 236
BspPI GGATC 3 cut(s) 229, 242, 395
BspT104I TTCGAA 1 cut(s) 203
BspT107I GGYRCC 1 cut(s) 26
BspTNI GGTCTC 1 cut(s) 1059
BsrDI GCAATG 3 cut(s) 497, 609, 825
BsrFI RCCGGY 1 cut(s) 334
BsrI ACTGG 1 cut(s) 82
BssAI RCCGGY 1 cut(s) 334
BssECI CCNNGG 2 cut(s) 148, 567
BssMI GATC 4 cut(s) 234, 400, 463, 996
BssT1I CCWWGG 1 cut(s) 148
Bst2UI CCWGG 1 cut(s) 569
Bst4CI ACNGT 2 cut(s) 643, 958
Bst6I CTCTTC 1 cut(s) 528
BstBAI YACGTR 1 cut(s) 476
BstBI TTCGAA 1 cut(s) 203
BstDSI CCRYGG 1 cut(s) 148
BstF5I GGATG 3 cut(s) 126, 139, 580
BstH2I RGCGCY 1 cut(s) 438
BstHHI GCGC 1 cut(s) 437
BstKTI GATC 4 cut(s) 237, 403, 466, 999
BstMAI GTCTC 2 cut(s) 705, 1059
BstMBI GATC 4 cut(s) 234, 400, 463, 996
BstMWI GCNNNNNNNGC 1 cut(s) 496
BstNI CCWGG 1 cut(s) 569
BstNSI RCATGY 1 cut(s) 718
BstSCI CCNGG 4 cut(s) 129, 182, 341, 567
BstV1I GCAGC 1 cut(s) 994
BstV2I GAAGAC 1 cut(s) 363
BstX2I RGATCY 2 cut(s) 234, 996
BstYI RGATCY 2 cut(s) 234, 996
BsuRI GGCC 3 cut(s) 153, 364, 602
BtgI CCRYGG 1 cut(s) 148
BtgZI GCGATG 1 cut(s) 474
BtsCI GGATG 3 cut(s) 126, 139, 580
BtsIMutI CAGTG 1 cut(s) 648
CciI TCATGA 2 cut(s) 286, 390
CfoI GCGC 1 cut(s) 437
Cfr10I RCCGGY 1 cut(s) 334
Cfr13I GGNCC 1 cut(s) 362
Csp6I GTAC 2 cut(s) 477, 588
CviQI GTAC 2 cut(s) 477, 588
DpnI GATC 4 cut(s) 236, 402, 465, 998
DpnII GATC 4 cut(s) 234, 400, 463, 996
EaeI YGGCCR 2 cut(s) 151, 600
Eam1104I CTCTTC 1 cut(s) 528
EarI CTCTTC 1 cut(s) 528
Ecl136II GAGCTC 1 cut(s) 53
Eco130I CCWWGG 1 cut(s) 148
Eco24I GRGCYC 2 cut(s) 55, 189
Eco31I GGTCTC 1 cut(s) 1059
Eco53kI GAGCTC 1 cut(s) 53
Eco57I CTGAAG 1 cut(s) 809
EcoICRI GAGCTC 1 cut(s) 53
EcoRII CCWGG 1 cut(s) 567
EcoT14I CCWWGG 1 cut(s) 148
EcoT22I ATGCAT 1 cut(s) 622
EcoT38I GRGCYC 2 cut(s) 55, 189
ErhI CCWWGG 1 cut(s) 148
FalI AAGNNNNNCTT 2 cut(s) 807, 839
FaqI GGGAC 1 cut(s) 694
FauNDI CATATG 1 cut(s) 658
Fnu4HI GCNGC 1 cut(s) 1008
FokI GGATG 3 cut(s) 113, 146, 587
FriOI GRGCYC 2 cut(s) 55, 189
Fsp4HI GCNGC 1 cut(s) 1008
FspBI CTAG 1 cut(s) 467
GlaI GCGC 1 cut(s) 436
GluI GCNGC 1 cut(s) 1008
GsuI CTGGAG 1 cut(s) 717
HaeII RGCGCY 1 cut(s) 438
HaeIII GGCC 3 cut(s) 153, 364, 602
HapII CCGG 5 cut(s) 131, 183, 335, 342, 404
HhaI GCGC 1 cut(s) 437
Hin6I GCGC 1 cut(s) 435
HinP1I GCGC 1 cut(s) 435
HinfI GANTC 4 cut(s) 502, 760, 980, 1014
HpaII CCGG 5 cut(s) 131, 183, 335, 342, 404
HphI GGTGA 2 cut(s) 29, 952
Hpy166II GTNNAC 5 cut(s) 196, 244, 479, 954, 1069
Hpy188I TCNGA 5 cut(s) 50, 250, 828, 985, 1076
Hpy188III TCNNGA 3 cut(s) 287, 353, 391
Hpy8I GTNNAC 5 cut(s) 196, 244, 479, 954, 1069
HpyAV CCTTC 4 cut(s) 210, 671, 833, 837
HpyCH4III ACNGT 2 cut(s) 643, 958
HpyCH4IV ACGT 1 cut(s) 475
HpyCH4V TGCA 6 cut(s) 113, 260, 620, 639, 743, 766
HpyF10VI GCNNNNNNNGC 1 cut(s) 496
HpySE526I ACGT 1 cut(s) 475
HspAI GCGC 1 cut(s) 435
Kzo9I GATC 4 cut(s) 234, 400, 463, 996
LmnI GCTCC 1 cut(s) 50
Lsp1109I GCAGC 1 cut(s) 994
LweI GCATC 2 cut(s) 135, 885
MaeI CTAG 1 cut(s) 467
MaeII ACGT 1 cut(s) 475
MaeIII GTNAC 3 cut(s) 99, 441, 958
MalI GATC 4 cut(s) 236, 402, 465, 998
MboI GATC 4 cut(s) 234, 400, 463, 996
MfeI CAATTG 1 cut(s) 915
MflI RGATCY 2 cut(s) 234, 996
MhlI GDGCHC 2 cut(s) 55, 189
MlsI TGGCCA 2 cut(s) 153, 602
MluCI AATT 3 cut(s) 691, 744, 915
MluNI TGGCCA 2 cut(s) 153, 602
MlyI GAGTC 1 cut(s) 496
MmeI TCCRAC 1 cut(s) 559
MnlI CCTC 9 cut(s) 236, 248, 292, 536, 547, 575, 701, 741, 1044
Mox20I TGGCCA 2 cut(s) 153, 602
Mph1103I ATGCAT 1 cut(s) 622
MscI TGGCCA 2 cut(s) 153, 602
MseI TTAA 1 cut(s) 368
MslI CAYNNNNRTG 5 cut(s) 106, 270, 285, 291, 872
Msp20I TGGCCA 2 cut(s) 153, 602
MspI CCGG 5 cut(s) 131, 183, 335, 342, 404
MspR9I CCNGG 4 cut(s) 131, 184, 343, 569
MunI CAATTG 1 cut(s) 915
Mva1269I GAATGC 1 cut(s) 620
MvaI CCWGG 1 cut(s) 569
MwoI GCNNNNNNNGC 1 cut(s) 496
NciI CCSGG 3 cut(s) 131, 184, 343
NcoI CCATGG 1 cut(s) 148
NdeI CATATG 1 cut(s) 658
NdeII GATC 4 cut(s) 234, 400, 463, 996
NlaIV GGNNCC 3 cut(s) 28, 71, 236
NmuCI GTSAC 2 cut(s) 99, 958
NsiI ATGCAT 1 cut(s) 622
NspI RCATGY 1 cut(s) 718
NspV TTCGAA 1 cut(s) 203
PagI TCATGA 2 cut(s) 286, 390
PciI ACATGT 1 cut(s) 714
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PctI GAATGC 1 cut(s) 620
PfeI GAWTC 3 cut(s) 760, 980, 1014
PflMI CCANNNNNTGG 1 cut(s) 694
PfoI TCCNGGA 1 cut(s) 129
PkrI GCNGC 1 cut(s) 1009
PleI GAGTC 1 cut(s) 496
PpsI GAGTC 1 cut(s) 496
Ppu21I YACGTR 1 cut(s) 476
PscI ACATGT 1 cut(s) 714
Psp124BI GAGCTC 1 cut(s) 55
Psp6I CCWGG 1 cut(s) 567
PspGI CCWGG 1 cut(s) 567
PspN4I GGNNCC 3 cut(s) 28, 71, 236
PspPI GGNCC 1 cut(s) 362
PsuI RGATCY 2 cut(s) 234, 996
RsaI GTAC 2 cut(s) 478, 589
RsaNI GTAC 2 cut(s) 477, 588
RseI CAYNNNNRTG 5 cut(s) 106, 270, 285, 291, 872
SacI GAGCTC 1 cut(s) 55
SaqAI TTAA 1 cut(s) 368
SatI GCNGC 1 cut(s) 1008
Sau3AI GATC 4 cut(s) 234, 400, 463, 996
Sau96I GGNCC 1 cut(s) 362
SchI GAGTC 1 cut(s) 496
ScrFI CCNGG 4 cut(s) 131, 184, 343, 569
SduI GDGCHC 2 cut(s) 55, 189
SfaNI GCATC 2 cut(s) 135, 885
SfuI TTCGAA 1 cut(s) 203
SmiMI CAYNNNNRTG 5 cut(s) 106, 270, 285, 291, 872
SmlI CTYRAG 2 cut(s) 54, 752
SmoI CTYRAG 2 cut(s) 54, 752
Sse9I AATT 3 cut(s) 691, 744, 915
SsiI CCGC 3 cut(s) 232, 499, 524
SspMI CTAG 1 cut(s) 467
SstI GAGCTC 1 cut(s) 55
StyD4I CCNGG 4 cut(s) 129, 182, 341, 567
StyI CCWWGG 1 cut(s) 148
TaaI ACNGT 2 cut(s) 643, 958
TaiI ACGT 1 cut(s) 478
TaqI TCGA 4 cut(s) 171, 203, 354, 936
TasI AATT 3 cut(s) 691, 744, 915
TfiI GAWTC 3 cut(s) 760, 980, 1014
Tru1I TTAA 1 cut(s) 368
Tru9I TTAA 1 cut(s) 368
TscAI CASTG 1 cut(s) 648
TseFI GTSAC 2 cut(s) 99, 958
TseI GCWGC 1 cut(s) 1007
Tsp45I GTSAC 2 cut(s) 99, 958
TspDTI ATGAA 6 cut(s) 76, 205, 266, 464, 795, 852
TspRI CASTG 1 cut(s) 648
Van91I CCANNNNNTGG 1 cut(s) 694
XceI RCATGY 1 cut(s) 718
XcmI CCANNNNNNNNNTGG 1 cut(s) 489
XspI CTAG 1 cut(s) 467
Zsp2I ATGCAT 1 cut(s) 622
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.