Prupe.3G129000_v2.0.a1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
13014227 .. 13016176
1950 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G129000.1

Sequence Viewer

Length: 1179 bp
ATGGGTTTGAGTAATGATAAAGTGAGTGCTACTAGCCATGAGCTTCTTCAAGCTCAAGCTCATGTGTGGAATCATATCTTCCAGTTCATAAACTCCATGTCATTAAAGTGTGCAGTTCAATTAGGCATCCCAGATGTGATTCACAGCCATGGCCAACCCATATCCCTTTCCAATCTCATTTCCGGCCTCAATGTCCACCCTTCGAAAGCTCATTTCATTGAACGCCTCATGCGAATTCTCGTCCACTCCAATTTCTTTGCACAAGACCAGCAAGTTCAGCTACCACTTCTTCCAAACAATAACAACAATGAGAATATTGTTCATCAGGATCTTGATGATGGAGAGGAGGAAAAAGCTGTTGTGGTGTATAGCCTAACACCAGCTTCCAGGCTTCTCCTCAAGGAAGGTCCATTAAGCACCACACAATTTTTACTTATGATTCTTGATCCAGTAGTAACAGATCCATTTCATCTAATGGGCACTTGGTGCCAGATGAACAATCATGGAAATCATGATCATCCAGCTTCCCCATTTGAGATGGCACATGGTAGGCCTTTTTGGGGTTTGGCTGCTCAGCAACCAAAGTTTGGTAGCTTGTTTAATGAAGCAATGGAGGCTGACTCTCAACTGCTCGCAAGGGCAGTGGTTGAAGAGTGTGAAGGAGTTTTTGAGGGTTTGAATTCCTTGGTTGATGTTGGAGGTGGCACAGGAACCATGGCCAAGGCCATTGCCAAGGCCTTCCCGAACATCAATTGCACTGTCTTTGACCAACCACATGTTGTAGCAAACTTGCAAGGGACTCACAATTTGGATTTTGTTGGAGGAGACATGTTTGAGAAGATACCCCCAGCAAATGCAATTTTTCTCAAGTGGATTCTGCATGATTGGAGTGATGAGGAAAGCGTGAAGATATTGAAGAAGAGTAGAGAAGCAATTCTGAGCAAAAATGAAGGAGGAAAGGTTATCATCCTGGACATAAATATGTCTGCAGATAATAAGAAGATGGATAAGAAATCAATTGAAACTCAGCTCATGTTTGATATGTTGATGATGGTCGACCTCAATGGCAAAGAGCGTAGTGAAGCAGAGTGGGAAAAGCTCTTTCTGACTGCTGGATTCTCTCACTATAAGATTACACATACATTCGGCCTAAGGTCTCTTATTGAAGTTTACTTCTGA

Protein Analysis

393

Amino Acids

43.78

Weight (kDa)

5.57

Isoelectric Point (pI)

38.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 486
AccB7I CCANNNNNTGG 1 cut(s) 587
AccI GTMKAC 1 cut(s) 1056
AclWI GGATC 3 cut(s) 336, 440, 455
AcoI YGGCCR 2 cut(s) 151, 717
AcsI RAATTY 2 cut(s) 234, 679
AdeI CACNNNGTG 1 cut(s) 486
AfiI CCNNNNNNNGG 2 cut(s) 560, 587
AflIII ACRYGT 2 cut(s) 775, 828
AgsI TTSAA 8 cut(s) 50, 119, 221, 650, 679, 916, 1022, 1166
AjnI CCWGG 2 cut(s) 386, 969
Alw26I GTCTC 2 cut(s) 819, 1161
AlwI GGATC 3 cut(s) 336, 440, 455
AoxI GGCC 7 cut(s) 151, 184, 551, 717, 723, 735, 1147
ApeKI GCWGC 1 cut(s) 569
ApoI RAATTY 2 cut(s) 234, 679
ArsI GACNNNNNNTTYG 2 cut(s) 790, 822
Asp700I GAANNNNTTC 1 cut(s) 933
AspS9I GGNCC 1 cut(s) 407
AsuII TTCGAA 1 cut(s) 203
AvaII GGWCC 1 cut(s) 407
AxyI CCTNAGG 1 cut(s) 1151
BaeGI GKGCMC 1 cut(s) 482
BalI TGGCCA 2 cut(s) 153, 719
BanI GGYRCC 1 cut(s) 486
BbvI GCAGC 1 cut(s) 556
BccI CCATC 4 cut(s) 332, 532, 997, 1045
BciT130I CCWGG 2 cut(s) 388, 971
BclI TGATCA 1 cut(s) 514
BcoDI GTCTC 2 cut(s) 819, 1161
BfaI CTAG 1 cut(s) 33
BfmI CTRYAG 1 cut(s) 987
BisI GCNGC 1 cut(s) 570
BlpI GCTNAGC 1 cut(s) 573
BlsI GCNGC 1 cut(s) 571
Bme1390I CCNGG 2 cut(s) 388, 971
Bme18I GGWCC 1 cut(s) 407
BmgT120I GGNCC 1 cut(s) 407
BmiI GGNNCC 2 cut(s) 488, 712
BmrFI CCNGG 2 cut(s) 388, 971
BmsI GCATC 1 cut(s) 135
BplI GAGNNNNNCTC 2 cut(s) 605, 637
Bpu1102I GCTNAGC 1 cut(s) 573
Bpu14I TTCGAA 1 cut(s) 203
BpuEI CTTGAG 3 cut(s) 39, 383, 851
BsaI GGTCTC 1 cut(s) 1161
BsaJI CCNNGG 5 cut(s) 148, 684, 714, 720, 732
BsaXI ACNNNNNCTCC 2 cut(s) 945, 975
Bsc4I CCNNNNNNNGG 2 cut(s) 560, 587
Bse1I ACTGG 2 cut(s) 82, 449
Bse21I CCTNAGG 1 cut(s) 1151
Bse3DI GCAATG 2 cut(s) 615, 726
BseBI CCWGG 2 cut(s) 388, 971
BseDI CCNNGG 5 cut(s) 148, 684, 714, 720, 732
BseGI GGATG 3 cut(s) 126, 517, 966
BseLI CCNNNNNNNGG 2 cut(s) 560, 587
BseMI GCAATG 2 cut(s) 615, 726
BseMII CTCAG 3 cut(s) 587, 929, 1040
BseNI ACTGG 2 cut(s) 82, 449
BseRI GAGGAG 3 cut(s) 359, 386, 837
BseSI GKGCMC 1 cut(s) 482
BseXI GCAGC 1 cut(s) 556
BseYI CCCAGC 1 cut(s) 847
BsgI GTGCAG 1 cut(s) 132
BshFI GGCC 7 cut(s) 153, 186, 553, 719, 725, 737, 1149
BshNI GGYRCC 1 cut(s) 486
BsiSI CCGG 1 cut(s) 183
BslFI GGGAC 1 cut(s) 811
BslI CCNNNNNNNGG 2 cut(s) 560, 587
BsmAI GTCTC 2 cut(s) 819, 1161
BsmFI GGGAC 1 cut(s) 811
BsnI GGCC 7 cut(s) 153, 186, 553, 719, 725, 737, 1149
Bso31I GGTCTC 1 cut(s) 1161
Bsp119I TTCGAA 1 cut(s) 203
Bsp1286I GDGCHC 1 cut(s) 482
Bsp143I GATC 4 cut(s) 328, 445, 460, 514
Bsp1720I GCTNAGC 1 cut(s) 573
Bsp19I CCATGG 2 cut(s) 148, 714
BspANI GGCC 7 cut(s) 153, 186, 553, 719, 725, 737, 1149
BspCNI CTCAG 3 cut(s) 586, 930, 1039
BspHI TCATGA 1 cut(s) 511
BspLI GGNNCC 2 cut(s) 488, 712
BspMAI CTGCAG 1 cut(s) 991
BspPI GGATC 3 cut(s) 336, 440, 455
BspT104I TTCGAA 1 cut(s) 203
BspT107I GGYRCC 1 cut(s) 486
BspTNI GGTCTC 1 cut(s) 1161
BsrDI GCAATG 2 cut(s) 615, 726
BsrI ACTGG 2 cut(s) 82, 449
BssECI CCNNGG 5 cut(s) 148, 684, 714, 720, 732
BssMI GATC 4 cut(s) 328, 445, 460, 514
BssT1I CCWWGG 5 cut(s) 148, 684, 714, 720, 732
Bst2UI CCWGG 2 cut(s) 388, 971
Bst4CI ACNGT 1 cut(s) 760
Bst6I CTCTTC 2 cut(s) 645, 914
BstAPI GCANNNNNTGC 1 cut(s) 486
BstBI TTCGAA 1 cut(s) 203
BstC8I GCNNGC 1 cut(s) 633
BstDEI CTNAG 4 cut(s) 573, 938, 1026, 1151
BstDSI CCRYGG 2 cut(s) 148, 714
BstF5I GGATG 3 cut(s) 126, 517, 966
BstKTI GATC 4 cut(s) 331, 448, 463, 517
BstMAI GTCTC 2 cut(s) 819, 1161
BstMBI GATC 4 cut(s) 328, 445, 460, 514
BstMWI GCNNNNNNNGC 3 cut(s) 277, 486, 614
BstNI CCWGG 2 cut(s) 388, 971
BstNSI RCATGY 2 cut(s) 779, 832
BstSCI CCNGG 2 cut(s) 386, 969
BstSFI CTRYAG 1 cut(s) 987
BstSLI GKGCMC 1 cut(s) 482
BstV1I GCAGC 1 cut(s) 556
BstX2I RGATCY 2 cut(s) 328, 460
BstYI RGATCY 2 cut(s) 328, 460
Bsu36I CCTNAGG 1 cut(s) 1151
BsuRI GGCC 7 cut(s) 153, 186, 553, 719, 725, 737, 1149
BtgI CCRYGG 2 cut(s) 148, 714
BtsCI GGATG 3 cut(s) 126, 517, 966
BtsI GCAGTG 1 cut(s) 648
BtsIMutI CAGTG 2 cut(s) 648, 756
Cac8I GCNNGC 1 cut(s) 633
CciI TCATGA 1 cut(s) 511
Cfr13I GGNCC 1 cut(s) 407
CspCI CAANNNNNGTGG 2 cut(s) 624, 659
DdeI CTNAG 4 cut(s) 573, 938, 1026, 1151
DpnI GATC 4 cut(s) 330, 447, 462, 516
DpnII GATC 4 cut(s) 328, 445, 460, 514
DraIII CACNNNGTG 1 cut(s) 486
EaeI YGGCCR 2 cut(s) 151, 717
Eam1104I CTCTTC 2 cut(s) 645, 914
EarI CTCTTC 2 cut(s) 645, 914
Eco130I CCWWGG 5 cut(s) 148, 684, 714, 720, 732
Eco147I AGGCCT 2 cut(s) 553, 737
Eco31I GGTCTC 1 cut(s) 1161
Eco47I GGWCC 1 cut(s) 407
Eco81I CCTNAGG 1 cut(s) 1151
EcoRI GAATTC 2 cut(s) 234, 679
EcoRII CCWGG 2 cut(s) 386, 969
EcoT14I CCWWGG 5 cut(s) 148, 684, 714, 720, 732
ErhI CCWWGG 5 cut(s) 148, 684, 714, 720, 732
FaqI GGGAC 1 cut(s) 811
FbaI TGATCA 1 cut(s) 514
FblI GTMKAC 1 cut(s) 1056
Fnu4HI GCNGC 1 cut(s) 570
FokI GGATG 3 cut(s) 113, 504, 953
Fsp4HI GCNGC 1 cut(s) 570
FspBI CTAG 1 cut(s) 33
GluI GCNGC 1 cut(s) 570
GsaI CCCAGC 1 cut(s) 851
HaeIII GGCC 7 cut(s) 153, 186, 553, 719, 725, 737, 1149
HapII CCGG 1 cut(s) 183
HincII GTYRAC 1 cut(s) 1057
HindII GTYRAC 1 cut(s) 1057
HinfI GANTC 7 cut(s) 70, 139, 439, 620, 799, 874, 1116
HpaII CCGG 1 cut(s) 183
Hpy166II GTNNAC 4 cut(s) 196, 244, 1057, 1171
Hpy188I TCNGA 3 cut(s) 939, 1107, 1178
Hpy188III TCNNGA 5 cut(s) 326, 332, 443, 512, 742
Hpy8I GTNNAC 4 cut(s) 196, 244, 1057, 1171
HpyAV CCTTC 5 cut(s) 210, 398, 653, 748, 944
HpyCH4III ACNGT 1 cut(s) 760
HpyCH4V TGCA 7 cut(s) 113, 260, 756, 793, 857, 880, 989
HpyF10VI GCNNNNNNNGC 3 cut(s) 277, 486, 614
HpyF3I CTNAG 4 cut(s) 573, 938, 1026, 1151
Ksp22I TGATCA 1 cut(s) 514
Kzo9I GATC 4 cut(s) 328, 445, 460, 514
Lsp1109I GCAGC 1 cut(s) 556
LweI GCATC 1 cut(s) 135
MaeI CTAG 1 cut(s) 33
MaeIII GTNAC 1 cut(s) 454
MalI GATC 4 cut(s) 330, 447, 462, 516
MboI GATC 4 cut(s) 328, 445, 460, 514
MboII GAAGA 9 cut(s) 38, 70, 281, 662, 850, 919, 928, 931, 1012
MfeI CAATTG 2 cut(s) 751, 1017
MflI RGATCY 2 cut(s) 328, 460
MhlI GDGCHC 1 cut(s) 482
MlsI TGGCCA 2 cut(s) 153, 719
MluNI TGGCCA 2 cut(s) 153, 719
MlyI GAGTC 2 cut(s) 614, 793
MmeI TCCRAC 2 cut(s) 676, 799
Mox20I TGGCCA 2 cut(s) 153, 719
MroXI GAANNNNTTC 1 cut(s) 933
MscI TGGCCA 2 cut(s) 153, 719
MseI TTAA 3 cut(s) 104, 413, 600
MslI CAYNNNNRTG 3 cut(s) 106, 147, 980
Msp20I TGGCCA 2 cut(s) 153, 719
MspI CCGG 1 cut(s) 183
MspR9I CCNGG 2 cut(s) 388, 971
MunI CAATTG 2 cut(s) 751, 1017
MvaI CCWGG 2 cut(s) 388, 971
MwoI GCNNNNNNNGC 3 cut(s) 277, 486, 614
NcoI CCATGG 2 cut(s) 148, 714
NdeII GATC 4 cut(s) 328, 445, 460, 514
NlaIV GGNNCC 2 cut(s) 488, 712
NspI RCATGY 2 cut(s) 779, 832
NspV TTCGAA 1 cut(s) 203
PagI TCATGA 1 cut(s) 511
PceI AGGCCT 2 cut(s) 553, 737
PciI ACATGT 2 cut(s) 775, 828
PcsI WCGNNNNNNNCGW 1 cut(s) 229
PdmI GAANNNNTTC 1 cut(s) 933
PfeI GAWTC 5 cut(s) 70, 139, 439, 874, 1116
PflMI CCANNNNNTGG 1 cut(s) 587
PfoI TCCNGGA 1 cut(s) 969
PkrI GCNGC 1 cut(s) 571
PleI GAGTC 2 cut(s) 614, 793
PpsI GAGTC 2 cut(s) 614, 793
PscI ACATGT 2 cut(s) 775, 828
Psp6I CCWGG 2 cut(s) 386, 969
PspFI CCCAGC 1 cut(s) 847
PspGI CCWGG 2 cut(s) 386, 969
PspN4I GGNNCC 2 cut(s) 488, 712
PspPI GGNCC 1 cut(s) 407
PstI CTGCAG 1 cut(s) 991
PsuI RGATCY 2 cut(s) 328, 460
RseI CAYNNNNRTG 3 cut(s) 106, 147, 980
SalI GTCGAC 1 cut(s) 1055
SaqAI TTAA 3 cut(s) 104, 413, 600
SatI GCNGC 1 cut(s) 570
Sau3AI GATC 4 cut(s) 328, 445, 460, 514
Sau96I GGNCC 1 cut(s) 407
SchI GAGTC 2 cut(s) 614, 793
ScrFI CCNGG 2 cut(s) 388, 971
SduI GDGCHC 1 cut(s) 482
SfaNI GCATC 1 cut(s) 135
SfcI CTRYAG 1 cut(s) 987
SfuI TTCGAA 1 cut(s) 203
SinI GGWCC 1 cut(s) 407
SmiMI CAYNNNNRTG 3 cut(s) 106, 147, 980
SmlI CTYRAG 3 cut(s) 54, 398, 866
SmoI CTYRAG 3 cut(s) 54, 398, 866
SseBI AGGCCT 2 cut(s) 553, 737
SspI AATATT 1 cut(s) 316
SspMI CTAG 1 cut(s) 33
StuI AGGCCT 2 cut(s) 553, 737
StyD4I CCNGG 2 cut(s) 386, 969
StyI CCWWGG 5 cut(s) 148, 684, 714, 720, 732
TaaI ACNGT 1 cut(s) 760
TaqI TCGA 2 cut(s) 203, 1056
TfiI GAWTC 5 cut(s) 70, 139, 439, 874, 1116
Tru1I TTAA 3 cut(s) 104, 413, 600
Tru9I TTAA 3 cut(s) 104, 413, 600
TscAI CASTG 2 cut(s) 648, 763
TseI GCWGC 1 cut(s) 569
TspDTI ATGAA 7 cut(s) 76, 205, 311, 458, 509, 618, 963
TspRI CASTG 2 cut(s) 648, 763
Van91I CCANNNNNTGG 1 cut(s) 587
VpaK11BI GGWCC 1 cut(s) 407
XapI RAATTY 2 cut(s) 234, 679
XceI RCATGY 2 cut(s) 779, 832
XmiI GTMKAC 1 cut(s) 1056
XmnI GAANNNNTTC 1 cut(s) 933
XspI CTAG 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.