pycom01g07740
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
8723422 .. 8725811
2390 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g07740.1

Sequence Viewer

Length: 1155 bp
ATGGGTTTGAGTAATGGTGAAGTGGGTGCTACTAGCCATGAGCTTCTTGGAGCTCAAGCTCAGATTTGGAACCACATGTTCCAGTTCATAAACTCCATGGCACTCAAATGTGCAGCTCAACTAGGCATCCCAGACGTGATTCACAACCACGGCCAACCCATCTCTCTTTCCGATCTCATCACTGCGCTGAATGTCCACCCTTCGAGAGCTCATTTCATCTCACGCCTGATGCGCATCCTCGTCCACTCCGATTTCTTTGCACAACATCATCATGTTCATCATGATTGTGACGATGTGGAGGAAGAAGAAGCTGTTGTATTGTATAGCCTAACTCCAACTTCTAGGCTTCTTCTCAAAGACGGGCCATCAAACACCACACCACTTGTACTCATGATACTCGATGCGGTACTGACAAACCCATTTCACTTGATGGGAGCTTGGTTGCAGATGAACGGTGGTGATGATCCAGCTACTATATGTACACCATTTGAAATGGAAAATGGAATGCCCTTTTGGGATCTGGCAGCTCAGGAACCAAGGTTCGGTAACTTGTTTGATGAAGCAATGGAGGCTGACTCCAAGCTTCTCGGAAGGGAGGTGGTGGAAGAGTGTGGAGGAGTTTTTGAGGGCTTGAAATCCCTGGTGGATGTTGGAGGAGGAACAGGAGCCATGGCCAAGGCCATTGCCAATGCATTCCCCAGCATCAACTGCATTGTGTTTGACCAACCACATGTGGTGGCTGACTTGCAAGGAACCACCCATAATTTGGGTTTTGTGGGGGGAGACATGTTTGTGGAAATACCCCCAGCAAATGCAATTTTGCTCAAGTGGATTCTGCATGATTGGAGCGATGAAGAAAGTGTGAAGATATTGAAGAAGTGTAGAGAAGCAATACTTCTGAGCAAAAACGATGAAGGGAATAAGAAGATTATCATCATAGACATAGTTGTGGGACATGTCGATAACAAGGAGAAGATGGTGGATAAGAAATCAATTGAAACCCAACTGATGTTTGATATGCTGATGATGTCTGCCTTCACTGGCAAAGAGCGTAGCGAATCAGAATGGAAAAAGATCTTTTTGGCTGCTAGTTTCACTCATTATAACATCACTCATACGTTCGGTTTCAGATCTCTTATTGAACTTTACCCTTGA

Protein Analysis

385

Amino Acids

42.59

Weight (kDa)

5.19

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dimerisation PF08100 23 - 120 8.2e-20 O-methyltransferase dimerisation domain
Methyltransf_2 PF00891 146 - 365 2.7e-48 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1104
Acc16I TGCGCA 1 cut(s) 233
AccB7I CCANNNNNTGG 1 cut(s) 766
AciI CCGC 1 cut(s) 404
AclWI GGATC 2 cut(s) 458, 525
AcoI YGGCCR 2 cut(s) 151, 672
AfaI GTAC 3 cut(s) 387, 408, 481
AfiI CCNNNNNNNGG 2 cut(s) 542, 766
AflIII ACRYGT 4 cut(s) 75, 730, 786, 955
AgsI TTSAA 5 cut(s) 491, 634, 874, 998, 1142
AjiI CACGTC 1 cut(s) 136
AjnI CCWGG 1 cut(s) 639
AjuI GAANNNNNNNTTGG 2 cut(s) 496, 528
AloI GAACNNNNNNTCC 2 cut(s) 524, 556
Alw21I GWGCWC 2 cut(s) 55, 211
Alw26I GTCTC 1 cut(s) 777
AlwI GGATC 2 cut(s) 458, 525
AoxI GGCC 4 cut(s) 151, 362, 672, 678
ApeKI GCWGC 3 cut(s) 113, 524, 1085
AspLEI GCGC 2 cut(s) 187, 234
AspS9I GGNCC 1 cut(s) 362
AsuHPI GGTGA 2 cut(s) 29, 470
BalI TGGCCA 1 cut(s) 674
BanII GRGCYC 2 cut(s) 55, 211
Bbv12I GWGCWC 2 cut(s) 55, 211
BbvI GCAGC 3 cut(s) 125, 536, 1072
BccI CCATC 4 cut(s) 167, 373, 424, 970
BceAI ACGGC 1 cut(s) 166
BcgI CGANNNNNNTGC 2 cut(s) 239, 273
BciT130I CCWGG 1 cut(s) 641
BcoDI GTCTC 1 cut(s) 777
BfaI CTAG 4 cut(s) 33, 122, 342, 1089
BglII AGATCT 2 cut(s) 1074, 1130
BisI GCNGC 3 cut(s) 114, 525, 1086
BlsI GCNGC 3 cut(s) 115, 526, 1087
Bme1390I CCNGG 1 cut(s) 641
BmgBI CACGTC 1 cut(s) 136
BmgT120I GGNCC 1 cut(s) 362
BmiI GGNNCC 4 cut(s) 71, 534, 667, 754
BmrFI CCNGG 1 cut(s) 641
BmsI GCATC 5 cut(s) 135, 219, 243, 391, 711
BplI GAGNNNNNCTC 2 cut(s) 560, 592
Bpu10I CCTNAGC 1 cut(s) 528
BpuEI CTTGAG 2 cut(s) 39, 809
BsaBI GATNNNNATC 2 cut(s) 233, 932
BsaJI CCNNGG 6 cut(s) 96, 148, 536, 639, 669, 675
Bsc4I CCNNNNNNNGG 2 cut(s) 542, 766
Bse1I ACTGG 2 cut(s) 82, 1045
Bse3DI GCAATG 2 cut(s) 570, 681
Bse8I GATNNNNATC 2 cut(s) 233, 932
BseBI CCWGG 1 cut(s) 641
BseDI CCNNGG 6 cut(s) 96, 148, 536, 639, 669, 675
BseGI GGATG 3 cut(s) 126, 234, 652
BseJI GATNNNNATC 2 cut(s) 233, 932
BseLI CCNNNNNNNGG 2 cut(s) 542, 766
BseMI GCAATG 2 cut(s) 570, 681
BseMII CTCAG 3 cut(s) 74, 542, 890
BseNI ACTGG 2 cut(s) 82, 1045
BseRI GAGGAG 2 cut(s) 630, 669
BseXI GCAGC 3 cut(s) 125, 536, 1072
BseYI CCCAGC 2 cut(s) 698, 805
BsgI GTGCAG 1 cut(s) 132
BshFI GGCC 4 cut(s) 153, 364, 674, 680
BsiHKAI GWGCWC 2 cut(s) 55, 211
BslFI GGGAC 1 cut(s) 966
BslI CCNNNNNNNGG 2 cut(s) 542, 766
BsmAI GTCTC 1 cut(s) 777
BsmFI GGGAC 1 cut(s) 966
BsmI GAATGC 2 cut(s) 510, 692
BsnI GGCC 4 cut(s) 153, 364, 674, 680
Bsp1286I GDGCHC 2 cut(s) 55, 211
Bsp1407I TGTACA 1 cut(s) 479
Bsp143I GATC 5 cut(s) 172, 463, 517, 1074, 1130
Bsp19I CCATGG 2 cut(s) 96, 669
BspACI CCGC 1 cut(s) 404
BspANI GGCC 4 cut(s) 153, 364, 674, 680
BspCNI CTCAG 3 cut(s) 73, 541, 891
BspHI TCATGA 2 cut(s) 280, 390
BspLI GGNNCC 4 cut(s) 71, 534, 667, 754
BspPI GGATC 2 cut(s) 458, 525
BsrDI GCAATG 2 cut(s) 570, 681
BsrGI TGTACA 1 cut(s) 479
BsrI ACTGG 2 cut(s) 82, 1045
BssECI CCNNGG 6 cut(s) 96, 148, 536, 639, 669, 675
BssMI GATC 5 cut(s) 172, 463, 517, 1074, 1130
BssT1I CCWWGG 4 cut(s) 96, 536, 669, 675
Bst2UI CCWGG 1 cut(s) 641
Bst4CI ACNGT 1 cut(s) 455
Bst6I CTCTTC 1 cut(s) 600
BstAPI GCANNNNNTGC 1 cut(s) 708
BstAUI TGTACA 1 cut(s) 479
BstDEI CTNAG 3 cut(s) 60, 528, 899
BstDSI CCRYGG 3 cut(s) 96, 148, 669
BstF5I GGATG 3 cut(s) 126, 234, 652
BstHHI GCGC 2 cut(s) 187, 234
BstKTI GATC 5 cut(s) 175, 466, 520, 1077, 1133
BstMAI GTCTC 1 cut(s) 777
BstMBI GATC 5 cut(s) 172, 463, 517, 1074, 1130
BstMWI GCNNNNNNNGC 3 cut(s) 231, 569, 708
BstNI CCWGG 1 cut(s) 641
BstNSI RCATGY 4 cut(s) 79, 734, 790, 959
BstSCI CCNGG 1 cut(s) 639
BstV1I GCAGC 3 cut(s) 125, 536, 1072
BstX2I RGATCY 3 cut(s) 517, 1074, 1130
BstYI RGATCY 3 cut(s) 517, 1074, 1130
BsuRI GGCC 4 cut(s) 153, 364, 674, 680
BtgI CCRYGG 3 cut(s) 96, 148, 669
BtgZI GCGATG 1 cut(s) 864
BtrI CACGTC 1 cut(s) 136
BtsCI GGATG 3 cut(s) 126, 234, 652
BtsI GCAGTG 1 cut(s) 180
BtsIMutI CAGTG 2 cut(s) 180, 1038
CciI TCATGA 2 cut(s) 280, 390
CfoI GCGC 2 cut(s) 187, 234
Cfr13I GGNCC 1 cut(s) 362
Csp6I GTAC 3 cut(s) 386, 407, 480
CspCI CAANNNNNGTGG 2 cut(s) 364, 399
CviQI GTAC 3 cut(s) 386, 407, 480
DdeI CTNAG 3 cut(s) 60, 528, 899
DpnI GATC 5 cut(s) 174, 465, 519, 1076, 1132
DpnII GATC 5 cut(s) 172, 463, 517, 1074, 1130
EaeI YGGCCR 2 cut(s) 151, 672
Eam1104I CTCTTC 1 cut(s) 600
EarI CTCTTC 1 cut(s) 600
Ecl136II GAGCTC 2 cut(s) 53, 209
Eco130I CCWWGG 4 cut(s) 96, 536, 669, 675
Eco24I GRGCYC 2 cut(s) 55, 211
Eco53kI GAGCTC 2 cut(s) 53, 209
EcoICRI GAGCTC 2 cut(s) 53, 209
EcoRII CCWGG 1 cut(s) 639
EcoT14I CCWWGG 4 cut(s) 96, 536, 669, 675
EcoT22I ATGCAT 1 cut(s) 694
EcoT38I GRGCYC 2 cut(s) 55, 211
ErhI CCWWGG 4 cut(s) 96, 536, 669, 675
FalI AAGNNNNNCTT 2 cut(s) 879, 911
FaqI GGGAC 1 cut(s) 966
Fnu4HI GCNGC 3 cut(s) 114, 525, 1086
FokI GGATG 3 cut(s) 113, 221, 659
FriOI GRGCYC 2 cut(s) 55, 211
Fsp4HI GCNGC 3 cut(s) 114, 525, 1086
FspAI RTGCGCAY 1 cut(s) 233
FspBI CTAG 4 cut(s) 33, 122, 342, 1089
FspI TGCGCA 1 cut(s) 233
GlaI GCGC 2 cut(s) 186, 233
GluI GCNGC 3 cut(s) 114, 525, 1086
GsaI CCCAGC 2 cut(s) 702, 809
HaeIII GGCC 4 cut(s) 153, 364, 674, 680
HhaI GCGC 2 cut(s) 187, 234
Hin6I GCGC 2 cut(s) 185, 232
HinP1I GCGC 2 cut(s) 185, 232
HindIII AAGCTT 1 cut(s) 581
HinfI GANTC 4 cut(s) 139, 575, 832, 1058
HphI GGTGA 2 cut(s) 29, 470
Hpy166II GTNNAC 3 cut(s) 196, 244, 482
Hpy188I TCNGA 7 cut(s) 63, 172, 250, 590, 900, 1063, 1130
Hpy188III TCNNGA 4 cut(s) 204, 281, 391, 530
Hpy8I GTNNAC 3 cut(s) 196, 244, 482
HpyAV CCTTC 4 cut(s) 210, 585, 908, 1045
HpyCH4III ACNGT 1 cut(s) 455
HpyCH4IV ACGT 2 cut(s) 135, 1118
HpyCH4V TGCA 8 cut(s) 113, 260, 445, 692, 711, 748, 815, 838
HpyF10VI GCNNNNNNNGC 3 cut(s) 231, 569, 708
HpyF3I CTNAG 3 cut(s) 60, 528, 899
HpySE526I ACGT 2 cut(s) 135, 1118
HspAI GCGC 2 cut(s) 185, 232
Kzo9I GATC 5 cut(s) 172, 463, 517, 1074, 1130
LmnI GCTCC 4 cut(s) 50, 434, 665, 846
Lsp1109I GCAGC 3 cut(s) 125, 536, 1072
LweI GCATC 5 cut(s) 135, 219, 243, 391, 711
MaeI CTAG 4 cut(s) 33, 122, 342, 1089
MaeII ACGT 2 cut(s) 135, 1118
MaeIII GTNAC 2 cut(s) 287, 545
MalI GATC 5 cut(s) 174, 465, 519, 1076, 1132
MboI GATC 5 cut(s) 172, 463, 517, 1074, 1130
MboII GAAGA 9 cut(s) 314, 317, 341, 617, 866, 877, 886, 937, 985
MfeI CAATTG 1 cut(s) 993
MflI RGATCY 3 cut(s) 517, 1074, 1130
MhlI GDGCHC 2 cut(s) 55, 211
MlsI TGGCCA 1 cut(s) 674
MluCI AATT 3 cut(s) 763, 816, 993
MluNI TGGCCA 1 cut(s) 674
MlyI GAGTC 1 cut(s) 569
MmeI TCCRAC 2 cut(s) 359, 631
MnlI CCTC 8 cut(s) 248, 292, 562, 589, 608, 619, 647, 650
Mox20I TGGCCA 1 cut(s) 674
Mph1103I ATGCAT 1 cut(s) 694
MscI TGGCCA 1 cut(s) 674
MslI CAYNNNNRTG 5 cut(s) 106, 270, 285, 791, 947
Msp20I TGGCCA 1 cut(s) 674
MspR9I CCNGG 1 cut(s) 641
MunI CAATTG 1 cut(s) 993
Mva1269I GAATGC 2 cut(s) 510, 692
MvaI CCWGG 1 cut(s) 641
MwoI GCNNNNNNNGC 3 cut(s) 231, 569, 708
NcoI CCATGG 2 cut(s) 96, 669
NdeII GATC 5 cut(s) 172, 463, 517, 1074, 1130
NlaIV GGNNCC 4 cut(s) 71, 534, 667, 754
NmuCI GTSAC 1 cut(s) 287
NsbI TGCGCA 1 cut(s) 233
NsiI ATGCAT 1 cut(s) 694
NspI RCATGY 4 cut(s) 79, 734, 790, 959
PagI TCATGA 2 cut(s) 280, 390
PciI ACATGT 4 cut(s) 75, 730, 786, 955
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PctI GAATGC 2 cut(s) 510, 692
PfeI GAWTC 3 cut(s) 139, 832, 1058
PflMI CCANNNNNTGG 1 cut(s) 766
PkrI GCNGC 3 cut(s) 115, 526, 1087
PleI GAGTC 1 cut(s) 569
PpsI GAGTC 1 cut(s) 569
PscI ACATGT 4 cut(s) 75, 730, 786, 955
PsiI TTATAA 1 cut(s) 1104
Psp124BI GAGCTC 2 cut(s) 55, 211
Psp6I CCWGG 1 cut(s) 639
PspFI CCCAGC 2 cut(s) 698, 805
PspGI CCWGG 1 cut(s) 639
PspN4I GGNNCC 4 cut(s) 71, 534, 667, 754
PspPI GGNCC 1 cut(s) 362
PsuI RGATCY 3 cut(s) 517, 1074, 1130
RsaI GTAC 3 cut(s) 387, 408, 481
RsaNI GTAC 3 cut(s) 386, 407, 480
RseI CAYNNNNRTG 5 cut(s) 106, 270, 285, 791, 947
SacI GAGCTC 2 cut(s) 55, 211
SatI GCNGC 3 cut(s) 114, 525, 1086
Sau3AI GATC 5 cut(s) 172, 463, 517, 1074, 1130
Sau96I GGNCC 1 cut(s) 362
SchI GAGTC 1 cut(s) 569
ScrFI CCNGG 1 cut(s) 641
SduI GDGCHC 2 cut(s) 55, 211
SfaNI GCATC 5 cut(s) 135, 219, 243, 391, 711
SmiMI CAYNNNNRTG 5 cut(s) 106, 270, 285, 791, 947
SmlI CTYRAG 2 cut(s) 54, 824
SmoI CTYRAG 2 cut(s) 54, 824
Sse9I AATT 3 cut(s) 763, 816, 993
SsiI CCGC 1 cut(s) 404
SspMI CTAG 4 cut(s) 33, 122, 342, 1089
SstI GAGCTC 2 cut(s) 55, 211
StyD4I CCNGG 1 cut(s) 639
StyI CCWWGG 4 cut(s) 96, 536, 669, 675
TaaI ACNGT 1 cut(s) 455
TaiI ACGT 2 cut(s) 138, 1121
TaqI TCGA 3 cut(s) 203, 399, 960
TasI AATT 3 cut(s) 763, 816, 993
TatI WGTACW 2 cut(s) 385, 479
TfiI GAWTC 3 cut(s) 139, 832, 1058
TscAI CASTG 2 cut(s) 187, 1045
TseFI GTSAC 1 cut(s) 287
TseI GCWGC 3 cut(s) 113, 524, 1085
Tsp45I GTSAC 1 cut(s) 287
TspDTI ATGAA 7 cut(s) 76, 205, 266, 464, 573, 867, 927
TspRI CASTG 2 cut(s) 187, 1045
Van91I CCANNNNNTGG 1 cut(s) 766
XceI RCATGY 4 cut(s) 79, 734, 790, 959
XcmI CCANNNNNNNNNTGG 2 cut(s) 44, 763
XspI CTAG 4 cut(s) 33, 122, 342, 1089
Zsp2I ATGCAT 1 cut(s) 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.