MD01G1051900.v1.1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
15667657 .. 15670388
2732 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1051900.v1.1.491

Sequence Viewer

Length: 1152 bp
ATGAGTTTGAGTAATGAAGTGGGTGCTACTAGCCATGAGCTTCTCGGAGCTCAAGCTCAGCTTTGGAACCACATATTCCAGTTCATAAACTCCATGTCACTCAAATGTGCAGTTCAACTAGGCATCGCAGACGTGATTCACAACCACGGCCAACCCATCTCTCTTTCCGAGCTCATGGCCGGGCTCAAGGTCCACCCTTCTAAAGCTCATTTTGTCTCACGCCTCATGCGCATCCTCGTTCACTCTAATTTCTTTGCACAACATCATCATGTTCATCATGATCGTGCCGATGTGGAGGAAGAAGAAACAGTTGTATTGTATAGCCTAACACCAGCTTCCAGGCTTCTTCTCAAAGACGGGTCATTAAACACCACACCATTTTTACTCATGATACTCGATCCGGTAGTGACAACCCCATTTCACTTGATGGGAGCTTGGTTGAAGATAAACGGTGGTGATGATCCAGCTGCTACATGTACACCATTTGAAATGGAAAATGGAATGCCCTTTTGGGAATTGGGAGCTAGGGAACCAAGGTTCGGTAACTTGTTTAATGAAGCAATGGAGGCTGACTCCAAGCTTATCGGAAGGGTTGTGGTGGAAGAGTGTGGAGGAGTTTTTGAGGGTTTGAAGTCCCTAATGGATGTTGGAGGGGGATCAGGAACAATGGCCAAGGCCATTGCCAATGCATTCCCCAACATCAACTGCACTGTGTTTGACCAGCCACATGTGGTGGCTGGCTTGCAGGGGACGACCCACAATTTGGGTTTTATGGGAGGAGACATGTTTGAGGAAATACCTCCAGCCGATGCAATTTTGCTTAAGTGGATTATGCATGATTGGAACGATGAAGAAAGCGTGACAATATTGAAGAAGTGTAGAGAAGCAATATCTCTTAGCAAAAACGAGGGTGGGAATAAGAAGATTATCATCATAGACATAGTTGTGGGATATGTGGATAACAAGAAGAAGATGATGGATAAGAAATCAATTGAAACTCAGCTCATGTTCGATATGTTGATGATGTCCATCCTCCCTGGCAAAGAGCGTAGCAAATCAGAATGGGAGAAGATCTTTTTCGCTGCTGGATTCACTCACTATAACATCACTCATACACTCGGTTTTAGGTCTCTTATTGAAGTTTACCCTTGA

Protein Analysis

384

Amino Acids

42.55

Weight (kDa)

5.74

Isoelectric Point (pI)

44.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dimerisation PF08100 22 - 119 1.6e-20 O-methyltransferase dimerisation domain
Methyltransf_2 PF00891 160 - 364 1.9e-49 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 230
AccB7I CCANNNNNTGG 1 cut(s) 763
AclWI GGATC 3 cut(s) 392, 455, 664
AcoI YGGCCR 3 cut(s) 148, 177, 669
AfaI GTAC 1 cut(s) 478
AfiI CCNNNNNNNGG 2 cut(s) 539, 763
AflII CTTAAG 1 cut(s) 821
AflIII ACRYGT 3 cut(s) 473, 727, 783
AgsI TTSAA 7 cut(s) 116, 442, 488, 631, 871, 995, 1139
AjiI CACGTC 1 cut(s) 133
AjnI CCWGG 2 cut(s) 338, 1036
AjuI GAANNNNNNNTTGG 2 cut(s) 493, 525
AloI GAACNNNNNNTCC 2 cut(s) 521, 553
Alw21I GWGCWC 2 cut(s) 52, 174
Alw26I GTCTC 3 cut(s) 220, 774, 1134
AlwI GGATC 3 cut(s) 392, 455, 664
AoxI GGCC 4 cut(s) 148, 177, 669, 675
ApeKI GCWGC 2 cut(s) 467, 1082
ArsI GACNNNNNNTTYG 2 cut(s) 745, 777
AspLEI GCGC 1 cut(s) 231
AspS9I GGNCC 1 cut(s) 190
AsuC2I CCSGG 1 cut(s) 181
AsuHPI GGTGA 1 cut(s) 467
AvaII GGWCC 1 cut(s) 190
BalI TGGCCA 1 cut(s) 671
BanII GRGCYC 3 cut(s) 52, 174, 186
Bbv12I GWGCWC 2 cut(s) 52, 174
BbvI GCAGC 2 cut(s) 454, 1069
BccI CCATC 4 cut(s) 164, 421, 970, 1037
BceAI ACGGC 1 cut(s) 163
BciT130I CCWGG 2 cut(s) 340, 1038
BcnI CCSGG 1 cut(s) 181
BcoDI GTCTC 3 cut(s) 220, 774, 1134
BfaI CTAG 3 cut(s) 30, 119, 525
BfrI CTTAAG 1 cut(s) 821
BglII AGATCT 1 cut(s) 1071
BisI GCNGC 2 cut(s) 468, 1083
BlpI GCTNAGC 1 cut(s) 57
BlsI GCNGC 2 cut(s) 469, 1084
Bme1390I CCNGG 3 cut(s) 181, 340, 1038
Bme18I GGWCC 1 cut(s) 190
BmgBI CACGTC 1 cut(s) 133
BmgT120I GGNCC 1 cut(s) 190
BmiI GGNNCC 2 cut(s) 68, 531
BmrFI CCNGG 3 cut(s) 181, 340, 1038
BmsI GCATC 3 cut(s) 132, 240, 799
BplI GAGNNNNNCTC 2 cut(s) 557, 589
BpmI CTGGAG 1 cut(s) 786
Bpu1102I GCTNAGC 1 cut(s) 57
BpuEI CTTGAG 2 cut(s) 36, 170
BpuMI CCSGG 1 cut(s) 181
BsaBI GATNNNNATC 2 cut(s) 929, 1028
BsaI GGTCTC 1 cut(s) 1134
BsaJI CCNNGG 4 cut(s) 145, 533, 672, 1036
BsaWI WCCGGW 1 cut(s) 400
Bsc4I CCNNNNNNNGG 2 cut(s) 539, 763
Bse1I ACTGG 1 cut(s) 79
Bse3DI GCAATG 2 cut(s) 567, 678
Bse8I GATNNNNATC 2 cut(s) 929, 1028
BseBI CCWGG 2 cut(s) 340, 1038
BseDI CCNNGG 4 cut(s) 145, 533, 672, 1036
BseGI GGATG 3 cut(s) 231, 649, 1029
BseJI GATNNNNATC 2 cut(s) 929, 1028
BseLI CCNNNNNNNGG 2 cut(s) 539, 763
BseMI GCAATG 2 cut(s) 567, 678
BseMII CTCAG 2 cut(s) 71, 1013
BseNI ACTGG 1 cut(s) 79
BseRI GAGGAG 2 cut(s) 627, 792
BseXI GCAGC 2 cut(s) 454, 1069
BsgI GTGCAG 2 cut(s) 129, 691
BshFI GGCC 4 cut(s) 150, 179, 671, 677
BsiHKAI GWGCWC 2 cut(s) 52, 174
BsiSI CCGG 2 cut(s) 180, 401
BslFI GGGAC 2 cut(s) 619, 763
BslI CCNNNNNNNGG 2 cut(s) 539, 763
BsmAI GTCTC 3 cut(s) 220, 774, 1134
BsmFI GGGAC 2 cut(s) 619, 763
BsmI GAATGC 2 cut(s) 507, 689
BsnI GGCC 4 cut(s) 150, 179, 671, 677
Bso31I GGTCTC 1 cut(s) 1134
Bsp1286I GDGCHC 3 cut(s) 52, 174, 186
Bsp1407I TGTACA 1 cut(s) 476
Bsp143I GATC 5 cut(s) 280, 397, 460, 656, 1071
Bsp1720I GCTNAGC 1 cut(s) 57
BspANI GGCC 4 cut(s) 150, 179, 671, 677
BspCNI CTCAG 2 cut(s) 70, 1012
BspHI TCATGA 2 cut(s) 277, 387
BspLI GGNNCC 2 cut(s) 68, 531
BspPI GGATC 3 cut(s) 392, 455, 664
BspTI CTTAAG 1 cut(s) 821
BspTNI GGTCTC 1 cut(s) 1134
BsrDI GCAATG 2 cut(s) 567, 678
BsrGI TGTACA 1 cut(s) 476
BsrI ACTGG 1 cut(s) 79
BssECI CCNNGG 4 cut(s) 145, 533, 672, 1036
BssMI GATC 5 cut(s) 280, 397, 460, 656, 1071
BssT1I CCWWGG 2 cut(s) 533, 672
Bst2UI CCWGG 2 cut(s) 340, 1038
Bst4CI ACNGT 3 cut(s) 310, 452, 712
Bst6I CTCTTC 1 cut(s) 597
BstAFI CTTAAG 1 cut(s) 821
BstAUI TGTACA 1 cut(s) 476
BstC8I GCNNGC 2 cut(s) 739, 743
BstDEI CTNAG 3 cut(s) 57, 896, 999
BstDSI CCRYGG 1 cut(s) 145
BstF5I GGATG 3 cut(s) 231, 649, 1029
BstHHI GCGC 1 cut(s) 231
BstKTI GATC 5 cut(s) 283, 400, 463, 659, 1074
BstMAI GTCTC 3 cut(s) 220, 774, 1134
BstMBI GATC 5 cut(s) 280, 397, 460, 656, 1071
BstMWI GCNNNNNNNGC 2 cut(s) 228, 566
BstNI CCWGG 2 cut(s) 340, 1038
BstNSI RCATGY 3 cut(s) 477, 731, 787
BstSCI CCNGG 3 cut(s) 179, 338, 1036
BstV1I GCAGC 2 cut(s) 454, 1069
BstX2I RGATCY 1 cut(s) 1071
BstYI RGATCY 1 cut(s) 1071
BsuRI GGCC 4 cut(s) 150, 179, 671, 677
BtgI CCRYGG 1 cut(s) 145
BtgZI GCGATG 1 cut(s) 109
BtrI CACGTC 1 cut(s) 133
BtsCI GGATG 3 cut(s) 231, 649, 1029
BtsIMutI CAGTG 1 cut(s) 708
Cac8I GCNNGC 2 cut(s) 739, 743
CciI TCATGA 2 cut(s) 277, 387
CfoI GCGC 1 cut(s) 231
Cfr13I GGNCC 1 cut(s) 190
Csp6I GTAC 1 cut(s) 477
CviQI GTAC 1 cut(s) 477
DdeI CTNAG 3 cut(s) 57, 896, 999
DpnI GATC 5 cut(s) 282, 399, 462, 658, 1073
DpnII GATC 5 cut(s) 280, 397, 460, 656, 1071
EaeI YGGCCR 3 cut(s) 148, 177, 669
Eam1104I CTCTTC 1 cut(s) 597
EarI CTCTTC 1 cut(s) 597
Ecl136II GAGCTC 2 cut(s) 50, 172
Eco130I CCWWGG 2 cut(s) 533, 672
Eco24I GRGCYC 3 cut(s) 52, 174, 186
Eco31I GGTCTC 1 cut(s) 1134
Eco47I GGWCC 1 cut(s) 190
Eco53kI GAGCTC 2 cut(s) 50, 172
EcoICRI GAGCTC 2 cut(s) 50, 172
EcoRII CCWGG 2 cut(s) 338, 1036
EcoT14I CCWWGG 2 cut(s) 533, 672
EcoT22I ATGCAT 2 cut(s) 691, 837
EcoT38I GRGCYC 3 cut(s) 52, 174, 186
ErhI CCWWGG 2 cut(s) 533, 672
FalI AAGNNNNNCTT 2 cut(s) 45, 77
FaqI GGGAC 2 cut(s) 619, 763
Fnu4HI GCNGC 2 cut(s) 468, 1083
FokI GGATG 3 cut(s) 218, 656, 1016
FriOI GRGCYC 3 cut(s) 52, 174, 186
Fsp4HI GCNGC 2 cut(s) 468, 1083
FspAI RTGCGCAY 1 cut(s) 230
FspBI CTAG 3 cut(s) 30, 119, 525
FspI TGCGCA 1 cut(s) 230
GlaI GCGC 1 cut(s) 230
GluI GCNGC 2 cut(s) 468, 1083
GsuI CTGGAG 1 cut(s) 786
HaeIII GGCC 4 cut(s) 150, 179, 671, 677
HapII CCGG 2 cut(s) 180, 401
HhaI GCGC 1 cut(s) 231
Hin6I GCGC 1 cut(s) 229
HinP1I GCGC 1 cut(s) 229
HindIII AAGCTT 1 cut(s) 578
HinfI GANTC 3 cut(s) 136, 572, 1089
HpaII CCGG 2 cut(s) 180, 401
HphI GGTGA 1 cut(s) 467
Hpy166II GTNNAC 4 cut(s) 193, 241, 479, 1144
Hpy188I TCNGA 4 cut(s) 47, 169, 587, 1060
Hpy188III TCNNGA 3 cut(s) 278, 388, 660
Hpy8I GTNNAC 4 cut(s) 193, 241, 479, 1144
HpyAV CCTTC 2 cut(s) 207, 582
HpyCH4III ACNGT 3 cut(s) 310, 452, 712
HpyCH4IV ACGT 1 cut(s) 132
HpyCH4V TGCA 7 cut(s) 110, 257, 689, 708, 745, 812, 835
HpyF10VI GCNNNNNNNGC 2 cut(s) 228, 566
HpyF3I CTNAG 3 cut(s) 57, 896, 999
HpySE526I ACGT 1 cut(s) 132
HspAI GCGC 1 cut(s) 229
Kzo9I GATC 5 cut(s) 280, 397, 460, 656, 1071
LmnI GCTCC 3 cut(s) 47, 431, 521
Lsp1109I GCAGC 2 cut(s) 454, 1069
LweI GCATC 3 cut(s) 132, 240, 799
MaeI CTAG 3 cut(s) 30, 119, 525
MaeII ACGT 1 cut(s) 132
MaeIII GTNAC 4 cut(s) 96, 406, 542, 859
MalI GATC 5 cut(s) 282, 399, 462, 658, 1073
MboI GATC 5 cut(s) 280, 397, 460, 656, 1071
MfeI CAATTG 1 cut(s) 990
MflI RGATCY 1 cut(s) 1071
MhlI GDGCHC 3 cut(s) 52, 174, 186
MlsI TGGCCA 1 cut(s) 671
MluCI AATT 5 cut(s) 247, 515, 760, 813, 990
MluNI TGGCCA 1 cut(s) 671
MlyI GAGTC 1 cut(s) 566
MmeI TCCRAC 1 cut(s) 628
Mox20I TGGCCA 1 cut(s) 671
Mph1103I ATGCAT 2 cut(s) 691, 837
MscI TGGCCA 1 cut(s) 671
MseI TTAA 3 cut(s) 365, 552, 822
MslI CAYNNNNRTG 4 cut(s) 103, 267, 282, 944
Msp20I TGGCCA 1 cut(s) 671
MspA1I CMGCKG 1 cut(s) 467
MspCI CTTAAG 1 cut(s) 821
MspI CCGG 2 cut(s) 180, 401
MspR9I CCNGG 3 cut(s) 181, 340, 1038
MunI CAATTG 1 cut(s) 990
Mva1269I GAATGC 2 cut(s) 507, 689
MvaI CCWGG 2 cut(s) 340, 1038
MwoI GCNNNNNNNGC 2 cut(s) 228, 566
NciI CCSGG 1 cut(s) 181
NdeII GATC 5 cut(s) 280, 397, 460, 656, 1071
NlaIV GGNNCC 2 cut(s) 68, 531
NmuCI GTSAC 3 cut(s) 96, 406, 859
NsbI TGCGCA 1 cut(s) 230
NsiI ATGCAT 2 cut(s) 691, 837
NspI RCATGY 3 cut(s) 477, 731, 787
PagI TCATGA 2 cut(s) 277, 387
PciI ACATGT 3 cut(s) 473, 727, 783
PctI GAATGC 2 cut(s) 507, 689
PfeI GAWTC 2 cut(s) 136, 1089
PflMI CCANNNNNTGG 1 cut(s) 763
PkrI GCNGC 2 cut(s) 469, 1084
PleI GAGTC 1 cut(s) 566
PpsI GAGTC 1 cut(s) 566
PscI ACATGT 3 cut(s) 473, 727, 783
Psp124BI GAGCTC 2 cut(s) 52, 174
Psp6I CCWGG 2 cut(s) 338, 1036
PspGI CCWGG 2 cut(s) 338, 1036
PspN4I GGNNCC 2 cut(s) 68, 531
PspPI GGNCC 1 cut(s) 190
PsuI RGATCY 1 cut(s) 1071
PvuII CAGCTG 1 cut(s) 467
RsaI GTAC 1 cut(s) 478
RsaNI GTAC 1 cut(s) 477
RseI CAYNNNNRTG 4 cut(s) 103, 267, 282, 944
SacI GAGCTC 2 cut(s) 52, 174
SaqAI TTAA 3 cut(s) 365, 552, 822
SatI GCNGC 2 cut(s) 468, 1083
Sau3AI GATC 5 cut(s) 280, 397, 460, 656, 1071
Sau96I GGNCC 1 cut(s) 190
SchI GAGTC 1 cut(s) 566
ScrFI CCNGG 3 cut(s) 181, 340, 1038
SduI GDGCHC 3 cut(s) 52, 174, 186
SfaNI GCATC 3 cut(s) 132, 240, 799
SinI GGWCC 1 cut(s) 190
SmiMI CAYNNNNRTG 4 cut(s) 103, 267, 282, 944
SmlI CTYRAG 3 cut(s) 51, 185, 821
SmoI CTYRAG 3 cut(s) 51, 185, 821
Sse9I AATT 5 cut(s) 247, 515, 760, 813, 990
SspI AATATT 1 cut(s) 867
SspMI CTAG 3 cut(s) 30, 119, 525
SstI GAGCTC 2 cut(s) 52, 174
StyD4I CCNGG 3 cut(s) 179, 338, 1036
StyI CCWWGG 2 cut(s) 533, 672
TaaI ACNGT 3 cut(s) 310, 452, 712
TaiI ACGT 1 cut(s) 135
TaqI TCGA 2 cut(s) 396, 1011
TasI AATT 5 cut(s) 247, 515, 760, 813, 990
TatI WGTACW 1 cut(s) 476
TfiI GAWTC 2 cut(s) 136, 1089
Tru1I TTAA 3 cut(s) 365, 552, 822
Tru9I TTAA 3 cut(s) 365, 552, 822
TscAI CASTG 1 cut(s) 715
TseFI GTSAC 3 cut(s) 96, 406, 859
TseI GCWGC 2 cut(s) 467, 1082
Tsp45I GTSAC 3 cut(s) 96, 406, 859
TspDTI ATGAA 5 cut(s) 30, 73, 263, 570, 864
TspRI CASTG 1 cut(s) 715
Van91I CCANNNNNTGG 1 cut(s) 763
Vha464I CTTAAG 1 cut(s) 821
VpaK11BI GGWCC 1 cut(s) 190
XceI RCATGY 3 cut(s) 477, 731, 787
XspI CTAG 3 cut(s) 30, 119, 525
Zsp2I ATGCAT 2 cut(s) 691, 837
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.