Prupe.3G119700_v2.0.a1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000692
Physical Location & Seq
Forward (+)
10450064 .. 10451296
1233 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G119700.1

Sequence Viewer

Length: 933 bp
ATGAGAGCAACTCATGAGCTACTCCAAGCACAAGCCCACATTTGGAACCACATTTTCAGCTTCATAAATTCTATGTCCCTCAAATGTGCAGTTCAATTAGATATACCAGATGTCATCCAAAAACATGGCCAACCCATGACTCTTTCCGAGCTTGTCTCCGCCCTGCCAATTTCCCCAACAAAAGCTCATTTCATCCCACGCCTCATGCGAATCTTAGTCCACTCCGGCTTCTTTGCCAGAGAAAGTCTGAATGGCGGCGAACAAGGTTATGTACTAACAGACGCCTCCGCACTCCTCCTGAAAGACAATCCCATGAGTGCAAGGCCCTTCTTACTTGACATGCTCAATCCCATCTTAACCGATCCATGGCAGTATTTGACCACTTGGTTCCAAAACGACAATCCTACGCCATTTCACGTGGGGGTGTTTCAAGGAGTGGATTCGTTGGTTGACGTGGGCGGTGGGACGGGAACTGTGGCCAAGTCCATTGCTGATGCCTTCCCTCATATGAAATGCACTGCACTTGATCTCCCTCATGTAGTTGCTGACCTAAAAGGGAGTAAGAACTTGGAATATGTTGCAGGGAACATGTTTGAGGCTGTTCCTGCGGCCGATGCAATTTTTTTGAAGTGGATATTGCATGACTGGAGTGATGAAGAATGCGTGAAAATACTCAAGCGTTGTAAAGAGGCAGTTACAAGAGAGGGTAAGAAAGGCAAGGTGATTATCGTAGATATGAAGGTGGAGAACAAGAATACAAATAAGGAATCTGGGGAGACACAACTTTTCTTCGATATGTTGATGATGGTTATGGCTACAGGGAAAGAAAGGAATGAGAAAGAATGGGCTAAGCTCTTTTCTGACGCAGGTTTTAGCCACTATAAGATTACTCCCTGTTTGAGTTTAAGGTCTCTCATTGAGGTTTATCCTTGA

Protein Analysis

311

Amino Acids

34.69

Weight (kDa)

6.26

Isoelectric Point (pI)

27.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 857
AciI CCGC 5 cut(s) 159, 255, 288, 459, 608
AclWI GGATC 1 cut(s) 356
AcoI YGGCCR 3 cut(s) 127, 477, 609
AcsI RAATTY 1 cut(s) 67
AcvI CACGTG 1 cut(s) 418
AcyI GRCGYC 1 cut(s) 282
AfaI GTAC 1 cut(s) 273
AfiI CCNNNNNNNGG 2 cut(s) 42, 366
AflIII ACRYGT 1 cut(s) 588
AgsI TTSAA 3 cut(s) 95, 431, 628
AjiI CACGTC 1 cut(s) 454
AluBI AGCT 5 cut(s) 19, 60, 151, 185, 853
AluI AGCT 5 cut(s) 19, 60, 151, 185, 853
Alw26I GTCTC 3 cut(s) 160, 770, 915
AlwI GGATC 1 cut(s) 356
AoxI GGCC 4 cut(s) 127, 323, 477, 609
ApoI RAATTY 1 cut(s) 67
AspS9I GGNCC 1 cut(s) 324
AsuHPI GGTGA 1 cut(s) 733
BalI TGGCCA 2 cut(s) 129, 479
BbrPI CACGTG 1 cut(s) 418
BccI CCATC 2 cut(s) 359, 799
BcoDI GTCTC 3 cut(s) 160, 770, 915
BfmI CTRYAG 1 cut(s) 816
BfuAI ACCTGC 1 cut(s) 857
BisI GCNGC 2 cut(s) 256, 609
BlpI GCTNAGC 1 cut(s) 849
BlsI GCNGC 2 cut(s) 257, 610
BmgBI CACGTC 1 cut(s) 454
BmgT120I GGNCC 1 cut(s) 324
BmiI GGNNCC 2 cut(s) 47, 389
BmsI GCATC 2 cut(s) 484, 604
BplI GAGNNNNNCTC 3 cut(s) 27, 140, 172
BpmI CTGGAG 1 cut(s) 667
Bpu1102I GCTNAGC 1 cut(s) 849
BpuEI CTTGAG 1 cut(s) 659
BsaAI YACGTR 1 cut(s) 418
BsaHI GRCGYC 1 cut(s) 282
BsaI GGTCTC 1 cut(s) 915
BsaJI CCNNGG 1 cut(s) 365
BsaXI ACNNNNNCTCC 2 cut(s) 513, 543
Bsc4I CCNNNNNNNGG 2 cut(s) 42, 366
Bse1I ACTGG 1 cut(s) 650
Bse3DI GCAATG 1 cut(s) 486
BseDI CCNNGG 1 cut(s) 365
BseGI GGATG 2 cut(s) 114, 192
BseLI CCNNNNNNNGG 2 cut(s) 42, 366
BseMI GCAATG 1 cut(s) 486
BseNI ACTGG 1 cut(s) 650
BseRI GAGGAG 1 cut(s) 284
BseX3I CGGCCG 1 cut(s) 609
BsgI GTGCAG 2 cut(s) 108, 504
Bsh1285I CGRYCG 1 cut(s) 612
BshFI GGCC 4 cut(s) 129, 325, 479, 611
BsiEI CGRYCG 1 cut(s) 612
BsiSI CCGG 1 cut(s) 225
BslFI GGGAC 2 cut(s) 61, 478
BslI CCNNNNNNNGG 2 cut(s) 42, 366
BsmAI GTCTC 3 cut(s) 160, 770, 915
BsmFI GGGAC 2 cut(s) 61, 478
BsmI GAATGC 1 cut(s) 665
BsnI GGCC 4 cut(s) 129, 325, 479, 611
Bso31I GGTCTC 1 cut(s) 915
Bsp143I GATC 2 cut(s) 361, 526
Bsp1720I GCTNAGC 1 cut(s) 849
Bsp19I CCATGG 1 cut(s) 365
BspACI CCGC 5 cut(s) 159, 255, 288, 459, 608
BspANI GGCC 4 cut(s) 129, 325, 479, 611
BspHI TCATGA 1 cut(s) 13
BspLI GGNNCC 2 cut(s) 47, 389
BspMI ACCTGC 1 cut(s) 857
BspPI GGATC 1 cut(s) 356
BspTNI GGTCTC 1 cut(s) 915
BsrDI GCAATG 1 cut(s) 486
BsrI ACTGG 1 cut(s) 650
BssECI CCNNGG 1 cut(s) 365
BssMI GATC 2 cut(s) 361, 526
BssNI GRCGYC 1 cut(s) 282
BssT1I CCWWGG 1 cut(s) 365
Bst4CI ACNGT 1 cut(s) 475
BstACI GRCGYC 1 cut(s) 282
BstBAI YACGTR 1 cut(s) 418
BstDEI CTNAG 2 cut(s) 214, 849
BstDSI CCRYGG 1 cut(s) 365
BstF5I GGATG 2 cut(s) 114, 192
BstKTI GATC 2 cut(s) 364, 529
BstMAI GTCTC 3 cut(s) 160, 770, 915
BstMBI GATC 2 cut(s) 361, 526
BstMCI CGRYCG 1 cut(s) 612
BstMWI GCNNNNNNNGC 2 cut(s) 605, 614
BstNSI RCATGY 2 cut(s) 343, 592
BstSFI CTRYAG 1 cut(s) 816
BstXI CCANNNNNNTGG 1 cut(s) 125
BstZI CGGCCG 1 cut(s) 609
BsuRI GGCC 4 cut(s) 129, 325, 479, 611
BtgI CCRYGG 1 cut(s) 365
BtrI CACGTC 1 cut(s) 454
BtsCI GGATG 2 cut(s) 114, 192
BtsI GCAGTG 1 cut(s) 516
BtsIMutI CAGTG 1 cut(s) 516
BveI ACCTGC 1 cut(s) 857
CciI TCATGA 1 cut(s) 13
Cfr13I GGNCC 1 cut(s) 324
CseI GACGC 2 cut(s) 290, 872
Csp6I GTAC 1 cut(s) 272
CviQI GTAC 1 cut(s) 272
DdeI CTNAG 2 cut(s) 214, 849
DpnI GATC 2 cut(s) 363, 528
DpnII GATC 2 cut(s) 361, 526
EaeI YGGCCR 3 cut(s) 127, 477, 609
EagI CGGCCG 1 cut(s) 609
EciI GGCGGA 1 cut(s) 148
EclXI CGGCCG 1 cut(s) 609
Eco130I CCWWGG 1 cut(s) 365
Eco31I GGTCTC 1 cut(s) 915
Eco52I CGGCCG 1 cut(s) 609
Eco72I CACGTG 1 cut(s) 418
EcoO109I RGGNCCY 1 cut(s) 324
EcoT14I CCWWGG 1 cut(s) 365
ErhI CCWWGG 1 cut(s) 365
FaqI GGGAC 2 cut(s) 61, 478
FauNDI CATATG 1 cut(s) 507
Fnu4HI GCNGC 2 cut(s) 256, 609
FokI GGATG 2 cut(s) 101, 179
Fsp4HI GCNGC 2 cut(s) 256, 609
GluI GCNGC 2 cut(s) 256, 609
GsuI CTGGAG 1 cut(s) 667
HaeIII GGCC 4 cut(s) 129, 325, 479, 611
HapII CCGG 1 cut(s) 225
HgaI GACGC 2 cut(s) 290, 872
Hin1I GRCGYC 1 cut(s) 282
HincII GTYRAC 1 cut(s) 451
HindII GTYRAC 1 cut(s) 451
HinfI GANTC 4 cut(s) 139, 210, 440, 767
HpaII CCGG 1 cut(s) 225
HphI GGTGA 1 cut(s) 733
Hpy166II GTNNAC 2 cut(s) 220, 451
Hpy188I TCNGA 3 cut(s) 148, 249, 862
Hpy188III TCNNGA 2 cut(s) 14, 298
Hpy8I GTNNAC 2 cut(s) 220, 451
HpyAV CCTTC 3 cut(s) 337, 508, 733
HpyCH4III ACNGT 1 cut(s) 475
HpyCH4IV ACGT 2 cut(s) 417, 453
HpyCH4V TGCA 7 cut(s) 89, 320, 516, 521, 581, 617, 640
HpyF10VI GCNNNNNNNGC 2 cut(s) 605, 614
HpyF3I CTNAG 2 cut(s) 214, 849
HpySE526I ACGT 2 cut(s) 417, 453
Hsp92I GRCGYC 1 cut(s) 282
Kzo9I GATC 2 cut(s) 361, 526
LweI GCATC 2 cut(s) 484, 604
MaeII ACGT 2 cut(s) 417, 453
MaeIII GTNAC 1 cut(s) 694
MalI GATC 2 cut(s) 363, 528
MboI GATC 2 cut(s) 361, 526
MboII GAAGA 2 cut(s) 668, 781
MlsI TGGCCA 2 cut(s) 129, 479
MluCI AATT 4 cut(s) 67, 95, 168, 618
MluNI TGGCCA 2 cut(s) 129, 479
MlyI GAGTC 1 cut(s) 133
Mox20I TGGCCA 2 cut(s) 129, 479
MscI TGGCCA 2 cut(s) 129, 479
MseI TTAA 2 cut(s) 356, 905
Msp20I TGGCCA 2 cut(s) 129, 479
MspI CCGG 1 cut(s) 225
Mva1269I GAATGC 1 cut(s) 665
MwoI GCNNNNNNNGC 2 cut(s) 605, 614
NcoI CCATGG 1 cut(s) 365
NdeI CATATG 1 cut(s) 507
NdeII GATC 2 cut(s) 361, 526
NlaIV GGNNCC 2 cut(s) 47, 389
NspI RCATGY 2 cut(s) 343, 592
PagI TCATGA 1 cut(s) 13
PciI ACATGT 1 cut(s) 588
PcsI WCGNNNNNNNCGW 1 cut(s) 205
PctI GAATGC 1 cut(s) 665
PfeI GAWTC 3 cut(s) 210, 440, 767
PkrI GCNGC 2 cut(s) 257, 610
PleI GAGTC 1 cut(s) 133
PmaCI CACGTG 1 cut(s) 418
PmlI CACGTG 1 cut(s) 418
PpsI GAGTC 1 cut(s) 133
Ppu21I YACGTR 1 cut(s) 418
PscI ACATGT 1 cut(s) 588
PspCI CACGTG 1 cut(s) 418
PspN4I GGNNCC 2 cut(s) 47, 389
PspPI GGNCC 1 cut(s) 324
RsaI GTAC 1 cut(s) 273
RsaNI GTAC 1 cut(s) 272
SaqAI TTAA 2 cut(s) 356, 905
SatI GCNGC 2 cut(s) 256, 609
Sau3AI GATC 2 cut(s) 361, 526
Sau96I GGNCC 1 cut(s) 324
SchI GAGTC 1 cut(s) 133
SfaNI GCATC 2 cut(s) 484, 604
SfcI CTRYAG 1 cut(s) 816
SmlI CTYRAG 1 cut(s) 674
SmoI CTYRAG 1 cut(s) 674
Sse9I AATT 4 cut(s) 67, 95, 168, 618
SsiI CCGC 5 cut(s) 159, 255, 288, 459, 608
StyI CCWWGG 1 cut(s) 365
TaaI ACNGT 1 cut(s) 475
TaiI ACGT 2 cut(s) 420, 456
TaqI TCGA 1 cut(s) 792
TasI AATT 4 cut(s) 67, 95, 168, 618
TatI WGTACW 1 cut(s) 271
TauI GCSGC 2 cut(s) 258, 611
TfiI GAWTC 3 cut(s) 210, 440, 767
Tru1I TTAA 2 cut(s) 356, 905
Tru9I TTAA 2 cut(s) 356, 905
TscAI CASTG 1 cut(s) 523
TspDTI ATGAA 5 cut(s) 52, 181, 524, 669, 752
TspRI CASTG 1 cut(s) 523
XapI RAATTY 1 cut(s) 67
XceI RCATGY 2 cut(s) 343, 592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.