Rh2AG331100
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
47864616 .. 47865851
1236 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG331100.1

Sequence Viewer

Length: 828 bp
ATGGAAAGACTGAACAGCTTTAAGCACCTTAACCATAAGTGGGCTGGTGAAGAGCATTCTACCCAGCTTCTTCAAGCTCAAGCCCACATATGGAACCACATTTTCAGCTTCATAAACTCCATGACCCTCAAATCTGCAATTGAACTAGGTATACCAGATATCATCAAAAAACATGGCCGCCCCATAACTCTTTCTGAGCTCACATCTGCATTACCAATTCACCCAACAAAAATCCCCAGTGTTTACCGCCTCATGCGTATATTGGTCCACTCCGGCATCTTTGCAAAAAAAAAGCTGACTAAACTGGATGAGGAAGAAGGTTATATACTTACTGACGCTTCTCAACTCCTCCTTAAGGATCACCCCTTCAGTATAACTCCATTTCTAATGGCTATGCTCAACCCTATCTTCACAAAACCATGGCATTATATGAACACTTGGTTCCAAAATAATGACCCTGCGGCATTTAACACGGCATATGGGATGACATTTTGGGACTACAGCACCCAGGAGCCAAGTCTTGCCAACTTTTTCAATGATGCCATGGCTAGTGATACTCGTTTGGTGACCAGCGTGTTACTTAAAGAGTGCAAGGGGGTATTCGAGGGATTGAAATCATTAGTTGATGTTGGGGGTGGTACAGGAACAATGGCCAAGGCCATTGTTGATGCATTCCCAGAAATTGACTGCACCGTACTTGATCTCCCACATGTGGTGGCTGATCTGCAAGGAAGTAAGAACCTGAAATATGCTGGAGGGGACATGTTTGAGGCAGTTCCTCCGGCAGATGCAATTATTTTGAAGGTAAATCTCAGCAATACTCTTTGA

Protein Analysis

275

Amino Acids

30.7

Weight (kDa)

6.25

Isoelectric Point (pI)

31.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dimerisation PF08100 31 - 120 1e-21 O-methyltransferase dimerisation domain
Methyltransf_2 PF00891 141 - 269 5e-32 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 151
AciI CCGC 3 cut(s) 178, 247, 461
AclWI GGATC 1 cut(s) 366
AcoI YGGCCR 2 cut(s) 175, 651
AcuI CTGAAG 1 cut(s) 352
AfaI GTAC 2 cut(s) 640, 696
AfiI CCNNNNNNNGG 4 cut(s) 40, 90, 355, 712
AflII CTTAAG 1 cut(s) 353
AflIII ACRYGT 2 cut(s) 709, 762
AgsI TTSAA 5 cut(s) 74, 143, 535, 613, 802
AjnI CCWGG 1 cut(s) 507
AluBI AGCT 6 cut(s) 18, 67, 77, 108, 199, 295
AluI AGCT 6 cut(s) 18, 67, 77, 108, 199, 295
Alw21I GWGCWC 1 cut(s) 201
AlwI GGATC 1 cut(s) 366
AoxI GGCC 3 cut(s) 175, 651, 657
AspS9I GGNCC 1 cut(s) 265
AsuHPI GGTGA 4 cut(s) 59, 212, 353, 577
AvaII GGWCC 1 cut(s) 265
BalI TGGCCA 1 cut(s) 653
BanII GRGCYC 1 cut(s) 201
BarI GAAGNNNNNNTAC 2 cut(s) 309, 341
Bbv12I GWGCWC 1 cut(s) 201
BceAI ACGGC 1 cut(s) 489
BciT130I CCWGG 1 cut(s) 509
BfaI CTAG 2 cut(s) 146, 549
BfmI CTRYAG 1 cut(s) 499
BfrI CTTAAG 1 cut(s) 353
BisI GCNGC 2 cut(s) 178, 462
BlsI GCNGC 2 cut(s) 179, 463
Bme1390I CCNGG 1 cut(s) 509
Bme18I GGWCC 1 cut(s) 265
BmgT120I GGNCC 1 cut(s) 265
BmiI GGNNCC 3 cut(s) 95, 443, 513
BmrFI CCNGG 1 cut(s) 509
BmrI ACTGGG 1 cut(s) 231
BmsI GCATC 4 cut(s) 285, 529, 658, 778
BmuI ACTGGG 1 cut(s) 231
BpmI CTGGAG 1 cut(s) 774
BpuEI CTTGAG 1 cut(s) 63
BsaBI GATNNNNATC 1 cut(s) 613
BsaJI CCNNGG 4 cut(s) 419, 507, 543, 654
BsaXI ACNNNNNCTCC 2 cut(s) 687, 717
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 90, 355, 712
Bse1I ACTGG 2 cut(s) 237, 309
Bse8I GATNNNNATC 1 cut(s) 613
BseBI CCWGG 1 cut(s) 509
BseDI CCNNGG 4 cut(s) 419, 507, 543, 654
BseGI GGATG 2 cut(s) 313, 489
BseJI GATNNNNATC 1 cut(s) 613
BseLI CCNNNNNNNGG 4 cut(s) 40, 90, 355, 712
BseMII CTCAG 2 cut(s) 186, 826
BseNI ACTGG 2 cut(s) 237, 309
BseRI GAGGAG 1 cut(s) 338
BseYI CCCAGC 1 cut(s) 63
BsgI GTGCAG 1 cut(s) 673
BshFI GGCC 3 cut(s) 177, 653, 659
BsiHKAI GWGCWC 1 cut(s) 201
BsiSI CCGG 2 cut(s) 273, 782
BslFI GGGAC 2 cut(s) 509, 773
BslI CCNNNNNNNGG 4 cut(s) 40, 90, 355, 712
BsmFI GGGAC 2 cut(s) 509, 773
BsmI GAATGC 2 cut(s) 55, 671
BsnI GGCC 3 cut(s) 177, 653, 659
Bsp1286I GDGCHC 1 cut(s) 201
Bsp143I GATC 3 cut(s) 358, 700, 721
Bsp19I CCATGG 2 cut(s) 419, 543
BspACI CCGC 3 cut(s) 178, 247, 461
BspANI GGCC 3 cut(s) 177, 653, 659
BspCNI CTCAG 2 cut(s) 187, 825
BspLI GGNNCC 3 cut(s) 95, 443, 513
BspPI GGATC 1 cut(s) 366
BspQI GCTCTTC 1 cut(s) 45
BspTI CTTAAG 1 cut(s) 353
BsrI ACTGG 2 cut(s) 237, 309
BssECI CCNNGG 4 cut(s) 419, 507, 543, 654
BssMI GATC 3 cut(s) 358, 700, 721
BssNAI GTATAC 1 cut(s) 152
BssT1I CCWWGG 3 cut(s) 419, 543, 654
Bst1107I GTATAC 1 cut(s) 152
Bst2UI CCWGG 1 cut(s) 509
Bst4CI ACNGT 1 cut(s) 694
Bst6I CTCTTC 1 cut(s) 45
BstAFI CTTAAG 1 cut(s) 353
BstDEI CTNAG 2 cut(s) 195, 812
BstDSI CCRYGG 2 cut(s) 419, 543
BstEII GGTNACC 1 cut(s) 565
BstENI CCTNNNNNAGG 1 cut(s) 353
BstF5I GGATG 2 cut(s) 313, 489
BstKTI GATC 3 cut(s) 361, 703, 724
BstMBI GATC 3 cut(s) 358, 700, 721
BstNI CCWGG 1 cut(s) 509
BstNSI RCATGY 2 cut(s) 713, 766
BstPI GGTNACC 1 cut(s) 565
BstSCI CCNGG 1 cut(s) 507
BstSFI CTRYAG 1 cut(s) 499
BstZ17I GTATAC 1 cut(s) 152
BsuRI GGCC 3 cut(s) 177, 653, 659
BtgI CCRYGG 2 cut(s) 419, 543
BtsCI GGATG 2 cut(s) 313, 489
BtsIMutI CAGTG 1 cut(s) 244
Cfr13I GGNCC 1 cut(s) 265
CseI GACGC 1 cut(s) 344
Csp6I GTAC 2 cut(s) 639, 695
CviAII CATG 7 cut(s) 121, 173, 253, 420, 544, 710, 763
CviQI GTAC 2 cut(s) 639, 695
DdeI CTNAG 2 cut(s) 195, 812
DpnI GATC 3 cut(s) 360, 702, 723
DpnII GATC 3 cut(s) 358, 700, 721
EaeI YGGCCR 2 cut(s) 175, 651
Eam1104I CTCTTC 1 cut(s) 45
EarI CTCTTC 1 cut(s) 45
Ecl136II GAGCTC 1 cut(s) 199
Eco130I CCWWGG 3 cut(s) 419, 543, 654
Eco24I GRGCYC 1 cut(s) 201
Eco32I GATATC 1 cut(s) 160
Eco47I GGWCC 1 cut(s) 265
Eco53kI GAGCTC 1 cut(s) 199
Eco57I CTGAAG 1 cut(s) 352
Eco91I GGTNACC 1 cut(s) 565
EcoICRI GAGCTC 1 cut(s) 199
EcoNI CCTNNNNNAGG 1 cut(s) 353
EcoO65I GGTNACC 1 cut(s) 565
EcoRII CCWGG 1 cut(s) 507
EcoRV GATATC 1 cut(s) 160
EcoT14I CCWWGG 3 cut(s) 419, 543, 654
EcoT22I ATGCAT 1 cut(s) 673
EcoT38I GRGCYC 1 cut(s) 201
ErhI CCWWGG 3 cut(s) 419, 543, 654
FaeI CATG 7 cut(s) 124, 176, 256, 423, 547, 713, 766
FaqI GGGAC 2 cut(s) 509, 773
FatI CATG 7 cut(s) 120, 172, 252, 419, 543, 709, 762
FauNDI CATATG 2 cut(s) 89, 478
FblI GTMKAC 1 cut(s) 151
Fnu4HI GCNGC 2 cut(s) 178, 462
FokI GGATG 2 cut(s) 320, 496
FriOI GRGCYC 1 cut(s) 201
Fsp4HI GCNGC 2 cut(s) 178, 462
FspBI CTAG 2 cut(s) 146, 549
GluI GCNGC 2 cut(s) 178, 462
GsaI CCCAGC 1 cut(s) 67
GsuI CTGGAG 1 cut(s) 774
HaeIII GGCC 3 cut(s) 177, 653, 659
HapII CCGG 2 cut(s) 273, 782
HgaI GACGC 1 cut(s) 344
Hin1II CATG 7 cut(s) 124, 176, 256, 423, 547, 713, 766
HpaII CCGG 2 cut(s) 273, 782
HphI GGTGA 4 cut(s) 59, 212, 353, 577
Hpy166II GTNNAC 3 cut(s) 152, 244, 268
Hpy188I TCNGA 1 cut(s) 196
Hpy8I GTNNAC 3 cut(s) 152, 244, 268
HpyAV CCTTC 3 cut(s) 311, 376, 796
HpyCH4III ACNGT 1 cut(s) 694
HpyCH4V TGCA 8 cut(s) 137, 209, 284, 591, 671, 690, 727, 791
HpyF3I CTNAG 2 cut(s) 195, 812
Hsp92II CATG 7 cut(s) 124, 176, 256, 423, 547, 713, 766
Kzo9I GATC 3 cut(s) 358, 700, 721
LguI GCTCTTC 1 cut(s) 45
LmnI GCTCC 1 cut(s) 511
LweI GCATC 4 cut(s) 285, 529, 658, 778
MaeI CTAG 2 cut(s) 146, 549
MaeIII GTNAC 2 cut(s) 565, 576
MalI GATC 3 cut(s) 360, 702, 723
MboI GATC 3 cut(s) 358, 700, 721
MboII GAAGA 4 cut(s) 62, 62, 326, 400
MfeI CAATTG 1 cut(s) 138
MhlI GDGCHC 1 cut(s) 201
MlsI TGGCCA 1 cut(s) 653
MluCI AATT 4 cut(s) 138, 216, 681, 792
MluNI TGGCCA 1 cut(s) 653
MnlI CCTC 8 cut(s) 137, 260, 304, 359, 598, 749, 763, 789
Mox20I TGGCCA 1 cut(s) 653
Mph1103I ATGCAT 1 cut(s) 673
MscI TGGCCA 1 cut(s) 653
MseI TTAA 5 cut(s) 21, 30, 354, 468, 582
Msp20I TGGCCA 1 cut(s) 653
MspCI CTTAAG 1 cut(s) 353
MspI CCGG 2 cut(s) 273, 782
MspR9I CCNGG 1 cut(s) 509
MunI CAATTG 1 cut(s) 138
Mva1269I GAATGC 2 cut(s) 55, 671
MvaI CCWGG 1 cut(s) 509
NcoI CCATGG 2 cut(s) 419, 543
NdeI CATATG 2 cut(s) 89, 478
NdeII GATC 3 cut(s) 358, 700, 721
NlaIII CATG 7 cut(s) 124, 176, 256, 423, 547, 713, 766
NlaIV GGNNCC 3 cut(s) 95, 443, 513
NmuCI GTSAC 1 cut(s) 565
NsiI ATGCAT 1 cut(s) 673
NspI RCATGY 2 cut(s) 713, 766
PciI ACATGT 2 cut(s) 709, 762
PciSI GCTCTTC 1 cut(s) 45
PctI GAATGC 2 cut(s) 55, 671
PkrI GCNGC 2 cut(s) 179, 463
PscI ACATGT 2 cut(s) 709, 762
Psp124BI GAGCTC 1 cut(s) 201
Psp6I CCWGG 1 cut(s) 507
PspEI GGTNACC 1 cut(s) 565
PspFI CCCAGC 1 cut(s) 63
PspGI CCWGG 1 cut(s) 507
PspN4I GGNNCC 3 cut(s) 95, 443, 513
PspPI GGNCC 1 cut(s) 265
PsrI GAACNNNNNNTAC 2 cut(s) 135, 167
RsaI GTAC 2 cut(s) 640, 696
RsaNI GTAC 2 cut(s) 639, 695
SacI GAGCTC 1 cut(s) 201
SapI GCTCTTC 1 cut(s) 45
SaqAI TTAA 5 cut(s) 21, 30, 354, 468, 582
SatI GCNGC 2 cut(s) 178, 462
Sau3AI GATC 3 cut(s) 358, 700, 721
Sau96I GGNCC 1 cut(s) 265
ScrFI CCNGG 1 cut(s) 509
SduI GDGCHC 1 cut(s) 201
SfaNI GCATC 4 cut(s) 285, 529, 658, 778
SfcI CTRYAG 1 cut(s) 499
SinI GGWCC 1 cut(s) 265
SmlI CTYRAG 2 cut(s) 78, 353
SmoI CTYRAG 2 cut(s) 78, 353
Sse9I AATT 4 cut(s) 138, 216, 681, 792
SsiI CCGC 3 cut(s) 178, 247, 461
SspMI CTAG 2 cut(s) 146, 549
SstI GAGCTC 1 cut(s) 201
StyD4I CCNGG 1 cut(s) 507
StyI CCWWGG 3 cut(s) 419, 543, 654
TaaI ACNGT 1 cut(s) 694
TaqI TCGA 1 cut(s) 603
TasI AATT 4 cut(s) 138, 216, 681, 792
TauI GCSGC 2 cut(s) 180, 464
Tru1I TTAA 5 cut(s) 21, 30, 354, 468, 582
Tru9I TTAA 5 cut(s) 21, 30, 354, 468, 582
TscAI CASTG 1 cut(s) 244
TseFI GTSAC 1 cut(s) 565
Tsp45I GTSAC 1 cut(s) 565
TspDTI ATGAA 2 cut(s) 100, 446
TspRI CASTG 1 cut(s) 244
Vha464I CTTAAG 1 cut(s) 353
VpaK11BI GGWCC 1 cut(s) 265
XagI CCTNNNNNAGG 1 cut(s) 353
XceI RCATGY 2 cut(s) 713, 766
XcmI CCANNNNNNNNNTGG 1 cut(s) 41
XmiI GTMKAC 1 cut(s) 151
XspI CTAG 2 cut(s) 146, 549
Zsp2I ATGCAT 1 cut(s) 673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.