Prupe.3G120400_v2.0.a1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
10625435 .. 10627412
1978 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G120400.1

Sequence Viewer

Length: 1182 bp
ATGAGTTTGAGTAATGATAAAGTGAGTGCTACTAGCCATGAGCTTCTTCAAGCTCAAGCTCATGTGTGGAATCATATCTTCCAGTTCATAAACTCCATGTCATTAAAGTGTGCAGTTCAATTAGGCATCCCAGATGTGATTCACAACCATGGCCAACCCATATCCCTTTCCAATCTCATTTCCGGCCTCAATGTCCACCCTTCGAAAGCTCATTTCATCGCACGCCTCATGCGAATCCTCGTCCACTCCAATTTCTTTGCACAAGACCAGCAAGTTCAGCTACCACTTCGTCCAAACAATAATAACAACAATGAGAATATTGTTCATCAGGATCTTGATGATGAAGCGGAGGAAAAAACTGTTGTGGTGTATAGCCTAACACCAGCTTCCAGGCTTCTCCTCAAGGAAGGTACATTAAGCACCCGACAATTTTTACTTATGATTCTTGATCCAGTAATGACAGATCCATTTCATCTAATGGGCACTTGGTGCCAGATGAACAATCATGGAAATCTTGATCATCCAGCTTCCCCATTTGAGATGGCACATGGAACGCCTTTTTGGGGTTTGGTTGCTCAGCAACCAAAGTTTGGTAGCTTGTTTAATGAAGCAATGGAGGCTGACTCTCAGCTGATAGCAAGGGCAGTAGTTGAAGAGTGTGAAGGAGTTTTTGAGGGTTTGAACTCCTTGGTTGATGTTGGAGGTGGCACAGGAACCATGGCCAAGGCCATTGCCAAGGCCTTCCCCAACATTAATTGCACTGTCTTTGACCAACCACATGTTGTCGCAAACTTGCAAGGGACTCACAATCTGGATTTTGTTGGAGGAGACATGTTTGAGAAGATACCCCCAGCAAATGCAATTTTCCTCAAGTGGATTCTGCATGATTGGAGTGATGAGGAAAGCGTGAAGATATTAAAGAAGAGTAGAGAAGCAATTCTGAGCAAAAATGAAGGAGGAAAGGTTATCATCCTGGATATAAATGTGTCTGCAGATAATACGAAGATGGATAAGAAATCAATTGAAACTCAGCTCATGTGGGATATGTTGATGATGGTCGAGCTCAGTGGCAAAGAGCGTAGTGAAGCAGAGTGGGAAAAGCTCTTTCTCACTGCTGGATTCTCTCACTATAAGATTACACATACATTGGGCCTAAGGTCTCTTATCGAAGTTTACCCCTGA

Protein Analysis

394

Amino Acids

43.9

Weight (kDa)

5.59

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 489
AccB7I CCANNNNNTGG 1 cut(s) 590
AciI CCGC 1 cut(s) 347
AclWI GGATC 3 cut(s) 339, 443, 458
AcoI YGGCCR 2 cut(s) 151, 720
AdeI CACNNNGTG 1 cut(s) 489
AfaI GTAC 1 cut(s) 412
AfiI CCNNNNNNNGG 2 cut(s) 563, 590
AflIII ACRYGT 2 cut(s) 778, 831
AgsI TTSAA 5 cut(s) 50, 119, 653, 682, 1025
AjnI CCWGG 2 cut(s) 389, 972
AjuI GAANNNNNNNTTGG 2 cut(s) 544, 576
Alw21I GWGCWC 1 cut(s) 1065
Alw26I GTCTC 2 cut(s) 822, 1164
AlwI GGATC 3 cut(s) 339, 443, 458
AoxI GGCC 6 cut(s) 151, 184, 720, 726, 738, 1150
AseI ATTAAT 1 cut(s) 753
Asp700I GAANNNNTTC 1 cut(s) 936
AspS9I GGNCC 1 cut(s) 1150
AsuII TTCGAA 1 cut(s) 203
AxyI CCTNAGG 1 cut(s) 1154
BaeGI GKGCMC 1 cut(s) 485
BalI TGGCCA 2 cut(s) 153, 722
BanI GGYRCC 1 cut(s) 489
BanII GRGCYC 1 cut(s) 1065
Bbv12I GWGCWC 1 cut(s) 1065
BccI CCATC 3 cut(s) 535, 1000, 1048
BciT130I CCWGG 2 cut(s) 391, 974
BclI TGATCA 1 cut(s) 517
BcoDI GTCTC 2 cut(s) 822, 1164
BfaI CTAG 1 cut(s) 33
BfmI CTRYAG 1 cut(s) 990
BlpI GCTNAGC 1 cut(s) 576
Bme1390I CCNGG 2 cut(s) 391, 974
BmgT120I GGNCC 1 cut(s) 1150
BmiI GGNNCC 2 cut(s) 491, 715
BmrFI CCNGG 2 cut(s) 391, 974
BmsI GCATC 1 cut(s) 135
BplI GAGNNNNNCTC 2 cut(s) 608, 640
Bpu1102I GCTNAGC 1 cut(s) 576
Bpu14I TTCGAA 1 cut(s) 203
BpuEI CTTGAG 3 cut(s) 39, 386, 854
BsaI GGTCTC 1 cut(s) 1164
BsaJI CCNNGG 5 cut(s) 148, 687, 717, 723, 735
BsaXI ACNNNNNCTCC 2 cut(s) 948, 978
Bsc4I CCNNNNNNNGG 2 cut(s) 563, 590
Bse1I ACTGG 2 cut(s) 82, 452
Bse21I CCTNAGG 1 cut(s) 1154
Bse3DI GCAATG 2 cut(s) 618, 729
BseBI CCWGG 2 cut(s) 391, 974
BseDI CCNNGG 5 cut(s) 148, 687, 717, 723, 735
BseGI GGATG 3 cut(s) 126, 520, 969
BseLI CCNNNNNNNGG 2 cut(s) 563, 590
BseMI GCAATG 2 cut(s) 618, 729
BseMII CTCAG 5 cut(s) 590, 641, 932, 1043, 1078
BseNI ACTGG 2 cut(s) 82, 452
BseRI GAGGAG 2 cut(s) 389, 840
BseSI GKGCMC 1 cut(s) 485
BseYI CCCAGC 1 cut(s) 850
BsgI GTGCAG 1 cut(s) 132
BshFI GGCC 6 cut(s) 153, 186, 722, 728, 740, 1152
BshNI GGYRCC 1 cut(s) 489
BsiHKAI GWGCWC 1 cut(s) 1065
BsiSI CCGG 1 cut(s) 183
BslFI GGGAC 1 cut(s) 814
BslI CCNNNNNNNGG 2 cut(s) 563, 590
BsmAI GTCTC 2 cut(s) 822, 1164
BsmFI GGGAC 1 cut(s) 814
BsnI GGCC 6 cut(s) 153, 186, 722, 728, 740, 1152
Bso31I GGTCTC 1 cut(s) 1164
Bsp119I TTCGAA 1 cut(s) 203
Bsp1286I GDGCHC 2 cut(s) 485, 1065
Bsp143I GATC 4 cut(s) 331, 448, 463, 517
Bsp1720I GCTNAGC 1 cut(s) 576
Bsp19I CCATGG 2 cut(s) 148, 717
BspACI CCGC 1 cut(s) 347
BspANI GGCC 6 cut(s) 153, 186, 722, 728, 740, 1152
BspCNI CTCAG 5 cut(s) 589, 640, 933, 1042, 1077
BspLI GGNNCC 2 cut(s) 491, 715
BspMAI CTGCAG 1 cut(s) 994
BspPI GGATC 3 cut(s) 339, 443, 458
BspT104I TTCGAA 1 cut(s) 203
BspT107I GGYRCC 1 cut(s) 489
BspTNI GGTCTC 1 cut(s) 1164
BsrDI GCAATG 2 cut(s) 618, 729
BsrI ACTGG 2 cut(s) 82, 452
BssECI CCNNGG 5 cut(s) 148, 687, 717, 723, 735
BssMI GATC 4 cut(s) 331, 448, 463, 517
BssT1I CCWWGG 5 cut(s) 148, 687, 717, 723, 735
Bst2UI CCWGG 2 cut(s) 391, 974
Bst4CI ACNGT 2 cut(s) 361, 763
Bst6I CTCTTC 2 cut(s) 648, 917
BstAPI GCANNNNNTGC 1 cut(s) 489
BstBI TTCGAA 1 cut(s) 203
BstC8I GCNNGC 1 cut(s) 223
BstDEI CTNAG 6 cut(s) 576, 627, 941, 1029, 1064, 1154
BstDSI CCRYGG 2 cut(s) 148, 717
BstF5I GGATG 3 cut(s) 126, 520, 969
BstKTI GATC 4 cut(s) 334, 451, 466, 520
BstMAI GTCTC 2 cut(s) 822, 1164
BstMBI GATC 4 cut(s) 331, 448, 463, 517
BstMWI GCNNNNNNNGC 3 cut(s) 277, 489, 617
BstNI CCWGG 2 cut(s) 391, 974
BstNSI RCATGY 2 cut(s) 782, 835
BstSCI CCNGG 2 cut(s) 389, 972
BstSFI CTRYAG 1 cut(s) 990
BstSLI GKGCMC 1 cut(s) 485
BstX2I RGATCY 2 cut(s) 331, 463
BstYI RGATCY 2 cut(s) 331, 463
Bsu36I CCTNAGG 1 cut(s) 1154
BsuRI GGCC 6 cut(s) 153, 186, 722, 728, 740, 1152
BtgI CCRYGG 2 cut(s) 148, 717
BtgZI GCGATG 1 cut(s) 202
BtsCI GGATG 3 cut(s) 126, 520, 969
BtsI GCAGTG 1 cut(s) 1110
BtsIMutI CAGTG 3 cut(s) 759, 1072, 1110
Cac8I GCNNGC 1 cut(s) 223
Cfr13I GGNCC 1 cut(s) 1150
Csp6I GTAC 1 cut(s) 411
CviQI GTAC 1 cut(s) 411
DdeI CTNAG 6 cut(s) 576, 627, 941, 1029, 1064, 1154
DpnI GATC 4 cut(s) 333, 450, 465, 519
DpnII GATC 4 cut(s) 331, 448, 463, 517
DraIII CACNNNGTG 1 cut(s) 489
EaeI YGGCCR 2 cut(s) 151, 720
Eam1104I CTCTTC 2 cut(s) 648, 917
EarI CTCTTC 2 cut(s) 648, 917
Ecl136II GAGCTC 1 cut(s) 1063
Eco130I CCWWGG 5 cut(s) 148, 687, 717, 723, 735
Eco147I AGGCCT 1 cut(s) 740
Eco24I GRGCYC 1 cut(s) 1065
Eco31I GGTCTC 1 cut(s) 1164
Eco53kI GAGCTC 1 cut(s) 1063
Eco81I CCTNAGG 1 cut(s) 1154
EcoICRI GAGCTC 1 cut(s) 1063
EcoRII CCWGG 2 cut(s) 389, 972
EcoT14I CCWWGG 5 cut(s) 148, 687, 717, 723, 735
EcoT38I GRGCYC 1 cut(s) 1065
ErhI CCWWGG 5 cut(s) 148, 687, 717, 723, 735
FaqI GGGAC 1 cut(s) 814
FbaI TGATCA 1 cut(s) 517
FokI GGATG 3 cut(s) 113, 507, 956
FriOI GRGCYC 1 cut(s) 1065
FspBI CTAG 1 cut(s) 33
GsaI CCCAGC 1 cut(s) 854
HaeIII GGCC 6 cut(s) 153, 186, 722, 728, 740, 1152
HapII CCGG 1 cut(s) 183
HinfI GANTC 8 cut(s) 70, 139, 234, 442, 623, 802, 877, 1119
HpaII CCGG 1 cut(s) 183
Hpy166II GTNNAC 3 cut(s) 196, 244, 1174
Hpy188I TCNGA 1 cut(s) 942
Hpy188III TCNNGA 5 cut(s) 329, 335, 446, 515, 812
Hpy8I GTNNAC 3 cut(s) 196, 244, 1174
HpyAV CCTTC 5 cut(s) 210, 401, 656, 751, 947
HpyCH4III ACNGT 2 cut(s) 361, 763
HpyCH4V TGCA 7 cut(s) 113, 260, 759, 796, 860, 883, 992
HpyF10VI GCNNNNNNNGC 3 cut(s) 277, 489, 617
HpyF3I CTNAG 6 cut(s) 576, 627, 941, 1029, 1064, 1154
Ksp22I TGATCA 1 cut(s) 517
Kzo9I GATC 4 cut(s) 331, 448, 463, 517
LweI GCATC 1 cut(s) 135
MaeI CTAG 1 cut(s) 33
MalI GATC 4 cut(s) 333, 450, 465, 519
MboI GATC 4 cut(s) 331, 448, 463, 517
MboII GAAGA 7 cut(s) 38, 70, 665, 853, 922, 934, 1015
MfeI CAATTG 1 cut(s) 1020
MflI RGATCY 2 cut(s) 331, 463
MhlI GDGCHC 2 cut(s) 485, 1065
MlsI TGGCCA 2 cut(s) 153, 722
MluCI AATT 7 cut(s) 119, 250, 428, 754, 861, 936, 1020
MluNI TGGCCA 2 cut(s) 153, 722
MlyI GAGTC 2 cut(s) 617, 796
MmeI TCCRAC 2 cut(s) 679, 802
Mox20I TGGCCA 2 cut(s) 153, 722
MroXI GAANNNNTTC 1 cut(s) 936
MscI TGGCCA 2 cut(s) 153, 722
MseI TTAA 5 cut(s) 104, 416, 603, 753, 917
MslI CAYNNNNRTG 2 cut(s) 106, 147
Msp20I TGGCCA 2 cut(s) 153, 722
MspA1I CMGCKG 1 cut(s) 631
MspI CCGG 1 cut(s) 183
MspR9I CCNGG 2 cut(s) 391, 974
MunI CAATTG 1 cut(s) 1020
MvaI CCWGG 2 cut(s) 391, 974
MwoI GCNNNNNNNGC 3 cut(s) 277, 489, 617
NcoI CCATGG 2 cut(s) 148, 717
NdeII GATC 4 cut(s) 331, 448, 463, 517
NlaIV GGNNCC 2 cut(s) 491, 715
NspI RCATGY 2 cut(s) 782, 835
NspV TTCGAA 1 cut(s) 203
PceI AGGCCT 1 cut(s) 740
PciI ACATGT 2 cut(s) 778, 831
PcsI WCGNNNNNNNCGW 1 cut(s) 229
PdmI GAANNNNTTC 1 cut(s) 936
PfeI GAWTC 6 cut(s) 70, 139, 234, 442, 877, 1119
PflMI CCANNNNNTGG 1 cut(s) 590
PfoI TCCNGGA 1 cut(s) 972
PleI GAGTC 2 cut(s) 617, 796
PpsI GAGTC 2 cut(s) 617, 796
PscI ACATGT 2 cut(s) 778, 831
PshBI ATTAAT 1 cut(s) 753
Psp124BI GAGCTC 1 cut(s) 1065
Psp6I CCWGG 2 cut(s) 389, 972
PspFI CCCAGC 1 cut(s) 850
PspGI CCWGG 2 cut(s) 389, 972
PspN4I GGNNCC 2 cut(s) 491, 715
PspPI GGNCC 1 cut(s) 1150
PstI CTGCAG 1 cut(s) 994
PsuI RGATCY 2 cut(s) 331, 463
PvuII CAGCTG 1 cut(s) 631
RsaI GTAC 1 cut(s) 412
RsaNI GTAC 1 cut(s) 411
RseI CAYNNNNRTG 2 cut(s) 106, 147
SacI GAGCTC 1 cut(s) 1065
SaqAI TTAA 5 cut(s) 104, 416, 603, 753, 917
Sau3AI GATC 4 cut(s) 331, 448, 463, 517
Sau96I GGNCC 1 cut(s) 1150
SchI GAGTC 2 cut(s) 617, 796
ScrFI CCNGG 2 cut(s) 391, 974
SduI GDGCHC 2 cut(s) 485, 1065
SfaNI GCATC 1 cut(s) 135
SfcI CTRYAG 1 cut(s) 990
SfuI TTCGAA 1 cut(s) 203
SmiMI CAYNNNNRTG 2 cut(s) 106, 147
SmlI CTYRAG 3 cut(s) 54, 401, 869
SmoI CTYRAG 3 cut(s) 54, 401, 869
Sse9I AATT 7 cut(s) 119, 250, 428, 754, 861, 936, 1020
SseBI AGGCCT 1 cut(s) 740
SsiI CCGC 1 cut(s) 347
SspI AATATT 1 cut(s) 319
SspMI CTAG 1 cut(s) 33
SstI GAGCTC 1 cut(s) 1065
StuI AGGCCT 1 cut(s) 740
StyD4I CCNGG 2 cut(s) 389, 972
StyI CCWWGG 5 cut(s) 148, 687, 717, 723, 735
TaaI ACNGT 2 cut(s) 361, 763
TaqI TCGA 3 cut(s) 203, 1059, 1167
TasI AATT 7 cut(s) 119, 250, 428, 754, 861, 936, 1020
TfiI GAWTC 6 cut(s) 70, 139, 234, 442, 877, 1119
Tru1I TTAA 5 cut(s) 104, 416, 603, 753, 917
Tru9I TTAA 5 cut(s) 104, 416, 603, 753, 917
TscAI CASTG 3 cut(s) 766, 1072, 1117
TspDTI ATGAA 8 cut(s) 76, 205, 314, 357, 461, 512, 621, 966
TspRI CASTG 3 cut(s) 766, 1072, 1117
Van91I CCANNNNNTGG 1 cut(s) 590
VspI ATTAAT 1 cut(s) 753
XceI RCATGY 2 cut(s) 782, 835
XmnI GAANNNNTTC 1 cut(s) 936
XspI CTAG 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.