pycom01g07360
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
8269564 .. 8270620
1057 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g07360.1

Sequence Viewer

Length: 696 bp
ATGGTGGCGATCGATCTAGTTCCACGTACACCATTTGAGGTTGCAAATGGAATGCCTTTTTGGGAATTGAGTGCTAAGAAACCGAGGTTTGGTGACTCGTTCAATGAAGCAATGGAGGCGGACTCCAAACTTATCACAAGAGCGGTGGTGGAAGAGTGTGGAGGAGTTTTTGAGGGTTTGAAATCCCTGGTGGATGTTGGAGGGGGTACAGGAACAATGGCCAAAGCCATTGCCAATGCATTCCCCAACATCAACTGCACAGTGTTTGACCAGCCACATGTGGTGGCTGACTTGGAAGGGACGACCCATAATTTGGGTTTTGTGGGAGGAGACATGTTTGATAAAATACCTCCAGCCAATGCAATTCTGCTCAAGTGGATACTGCATGATTGGAATGATGAAGAAAGCGTGAAGATATTGAAGAAGTGTAGAGAAGCAATGCTTCTGAGCAAAAATGAAGGAAGGAAGAAGATTATCATCATAGACATAGTTGTGGGGTATGTCAATAACAAGATGCAGTTGGATAAGAAATCAATTGAAACCCAACTCATGTTCGATATGTTGATGATGTCCACCGTCACTAGCAAAGAGCGTAGCGAATTAGAATGGGAGAAGATCTTTTTGGCCGCTGGATTCACTCACTACAACATCACTCATACACTTGGGTTGAGGTCTCTTATTGAAGTTTACCTCTGA

Protein Analysis

232

Amino Acids

25.78

Weight (kDa)

5.45

Isoelectric Point (pI)

41.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_2 PF00891 10 - 212 5e-49 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 313
AccBSI CCGCTC 1 cut(s) 143
AciI CCGC 3 cut(s) 119, 143, 627
AcoI YGGCCR 2 cut(s) 219, 624
AfaI GTAC 2 cut(s) 28, 208
AfiI CCNNNNNNNGG 2 cut(s) 89, 313
AflIII ACRYGT 2 cut(s) 277, 333
AgsI TTSAA 5 cut(s) 103, 181, 421, 539, 683
AjnI CCWGG 1 cut(s) 186
AjuI GAANNNNNNNTTGG 4 cut(s) 43, 75, 605, 637
Alw26I GTCTC 2 cut(s) 324, 678
AoxI GGCC 2 cut(s) 219, 624
ArsI GACNNNNNNTTYG 2 cut(s) 295, 327
AsuHPI GGTGA 1 cut(s) 104
BalI TGGCCA 1 cut(s) 221
BciT130I CCWGG 1 cut(s) 188
BciVI GTATCC 1 cut(s) 372
BcoDI GTCTC 2 cut(s) 324, 678
BfaI CTAG 2 cut(s) 17, 582
BfuI GTATCC 1 cut(s) 372
BglII AGATCT 1 cut(s) 615
BisI GCNGC 1 cut(s) 627
BlsI GCNGC 1 cut(s) 628
Bme1390I CCNGG 1 cut(s) 188
BmrFI CCNGG 1 cut(s) 188
BmsI GCATC 1 cut(s) 504
BplI GAGNNNNNCTC 2 cut(s) 107, 139
BpmI CTGGAG 1 cut(s) 336
BpuEI CTTGAG 1 cut(s) 356
Bsa29I ATCGAT 1 cut(s) 12
BsaAI YACGTR 1 cut(s) 26
BsaBI GATNNNNATC 1 cut(s) 476
BsaI GGTCTC 1 cut(s) 678
BsaJI CCNNGG 2 cut(s) 83, 186
Bsc4I CCNNNNNNNGG 2 cut(s) 89, 313
Bse3DI GCAATG 3 cut(s) 117, 228, 444
Bse8I GATNNNNATC 1 cut(s) 476
BseBI CCWGG 1 cut(s) 188
BseCI ATCGAT 1 cut(s) 12
BseDI CCNNGG 2 cut(s) 83, 186
BseGI GGATG 1 cut(s) 199
BseJI GATNNNNATC 1 cut(s) 476
BseLI CCNNNNNNNGG 2 cut(s) 89, 313
BseMI GCAATG 3 cut(s) 117, 228, 444
BseMII CTCAG 1 cut(s) 437
BseRI GAGGAG 2 cut(s) 177, 342
BsgI GTGCAG 1 cut(s) 241
Bsh1285I CGRYCG 1 cut(s) 12
BshFI GGCC 2 cut(s) 221, 626
BshVI ATCGAT 1 cut(s) 12
BsiEI CGRYCG 1 cut(s) 12
BslFI GGGAC 1 cut(s) 313
BslI CCNNNNNNNGG 2 cut(s) 89, 313
BsmAI GTCTC 2 cut(s) 324, 678
BsmFI GGGAC 1 cut(s) 313
BsmI GAATGC 2 cut(s) 57, 239
BsnI GGCC 2 cut(s) 221, 626
Bso31I GGTCTC 1 cut(s) 678
Bsp143I GATC 3 cut(s) 9, 13, 615
BspACI CCGC 3 cut(s) 119, 143, 627
BspANI GGCC 2 cut(s) 221, 626
BspCNI CTCAG 1 cut(s) 438
BspDI ATCGAT 1 cut(s) 12
BspTNI GGTCTC 1 cut(s) 678
BsrBI CCGCTC 1 cut(s) 143
BsrDI GCAATG 3 cut(s) 117, 228, 444
BssECI CCNNGG 2 cut(s) 83, 186
BssMI GATC 3 cut(s) 9, 13, 615
Bst2UI CCWGG 1 cut(s) 188
Bst4CI ACNGT 2 cut(s) 262, 577
Bst6I CTCTTC 1 cut(s) 147
BstBAI YACGTR 1 cut(s) 26
BstDEI CTNAG 2 cut(s) 75, 446
BstF5I GGATG 1 cut(s) 199
BstKTI GATC 3 cut(s) 12, 16, 618
BstMAI GTCTC 2 cut(s) 324, 678
BstMBI GATC 3 cut(s) 9, 13, 615
BstMCI CGRYCG 1 cut(s) 12
BstMWI GCNNNNNNNGC 1 cut(s) 116
BstNI CCWGG 1 cut(s) 188
BstNSI RCATGY 2 cut(s) 281, 337
BstSCI CCNGG 1 cut(s) 186
BstX2I RGATCY 1 cut(s) 615
BstYI RGATCY 1 cut(s) 615
Bsu15I ATCGAT 1 cut(s) 12
BsuI GTATCC 1 cut(s) 372
BsuRI GGCC 2 cut(s) 221, 626
BsuTUI ATCGAT 1 cut(s) 12
BtsCI GGATG 1 cut(s) 199
BtsIMutI CAGTG 1 cut(s) 267
ClaI ATCGAT 1 cut(s) 12
Csp6I GTAC 2 cut(s) 27, 207
CspCI CAANNNNNGTGG 2 cut(s) 126, 161
CviAII CATG 4 cut(s) 278, 334, 386, 550
CviJI RGCY 6 cut(s) 221, 227, 274, 287, 356, 626
CviKI_1 RGCY 6 cut(s) 221, 227, 274, 287, 356, 626
CviQI GTAC 2 cut(s) 27, 207
DdeI CTNAG 2 cut(s) 75, 446
DpnI GATC 3 cut(s) 11, 15, 617
DpnII GATC 3 cut(s) 9, 13, 615
EaeI YGGCCR 2 cut(s) 219, 624
Eam1104I CTCTTC 1 cut(s) 147
EarI CTCTTC 1 cut(s) 147
EciI GGCGGA 1 cut(s) 134
Eco31I GGTCTC 1 cut(s) 678
EcoRII CCWGG 1 cut(s) 186
EcoT22I ATGCAT 1 cut(s) 241
FaeI CATG 4 cut(s) 281, 337, 389, 553
FalI AAGNNNNNCTT 2 cut(s) 426, 458
FaqI GGGAC 1 cut(s) 313
FatI CATG 4 cut(s) 277, 333, 385, 549
Fnu4HI GCNGC 1 cut(s) 627
FokI GGATG 1 cut(s) 206
Fsp4HI GCNGC 1 cut(s) 627
FspBI CTAG 2 cut(s) 17, 582
GluI GCNGC 1 cut(s) 627
GsuI CTGGAG 1 cut(s) 336
HaeIII GGCC 2 cut(s) 221, 626
Hin1II CATG 4 cut(s) 281, 337, 389, 553
HinfI GANTC 3 cut(s) 95, 122, 633
HphI GGTGA 1 cut(s) 104
Hpy166II GTNNAC 3 cut(s) 29, 573, 688
Hpy188I TCNGA 2 cut(s) 447, 695
Hpy8I GTNNAC 3 cut(s) 29, 573, 688
HpyAV CCTTC 3 cut(s) 290, 452, 456
HpyCH4III ACNGT 2 cut(s) 262, 577
HpyCH4IV ACGT 1 cut(s) 25
HpyCH4V TGCA 6 cut(s) 44, 239, 258, 362, 385, 517
HpyF10VI GCNNNNNNNGC 1 cut(s) 116
HpyF3I CTNAG 2 cut(s) 75, 446
HpySE526I ACGT 1 cut(s) 25
Hsp92II CATG 4 cut(s) 281, 337, 389, 553
Kzo9I GATC 3 cut(s) 9, 13, 615
LpnPI CCDG 6 cut(s) 173, 195, 200, 284, 366, 615
LweI GCATC 1 cut(s) 504
MaeI CTAG 2 cut(s) 17, 582
MaeII ACGT 1 cut(s) 25
MaeIII GTNAC 2 cut(s) 92, 577
MalI GATC 3 cut(s) 11, 15, 617
MbiI CCGCTC 1 cut(s) 143
MboI GATC 3 cut(s) 9, 13, 615
MboII GAAGA 7 cut(s) 164, 413, 424, 433, 478, 481, 625
MfeI CAATTG 1 cut(s) 534
MflI RGATCY 1 cut(s) 615
MlsI TGGCCA 1 cut(s) 221
MluCI AATT 5 cut(s) 65, 310, 363, 534, 599
MluNI TGGCCA 1 cut(s) 221
MlyI GAGTC 2 cut(s) 89, 116
MmeI TCCRAC 2 cut(s) 178, 501
MnlI CCTC 9 cut(s) 31, 78, 109, 155, 166, 194, 320, 360, 663
Mox20I TGGCCA 1 cut(s) 221
Mph1103I ATGCAT 1 cut(s) 241
MscI TGGCCA 1 cut(s) 221
MslI CAYNNNNRTG 1 cut(s) 491
Msp20I TGGCCA 1 cut(s) 221
MspA1I CMGCKG 1 cut(s) 629
MspR9I CCNGG 1 cut(s) 188
MunI CAATTG 1 cut(s) 534
Mva1269I GAATGC 2 cut(s) 57, 239
MvaI CCWGG 1 cut(s) 188
MwoI GCNNNNNNNGC 1 cut(s) 116
NdeII GATC 3 cut(s) 9, 13, 615
NlaIII CATG 4 cut(s) 281, 337, 389, 553
NmuCI GTSAC 2 cut(s) 92, 577
NsiI ATGCAT 1 cut(s) 241
NspI RCATGY 2 cut(s) 281, 337
PciI ACATGT 2 cut(s) 277, 333
PctI GAATGC 2 cut(s) 57, 239
PfeI GAWTC 1 cut(s) 633
PflMI CCANNNNNTGG 1 cut(s) 313
PkrI GCNGC 1 cut(s) 628
Ple19I CGATCG 1 cut(s) 12
PleI GAGTC 2 cut(s) 89, 116
PpsI GAGTC 2 cut(s) 89, 116
Ppu21I YACGTR 1 cut(s) 26
PscI ACATGT 2 cut(s) 277, 333
Psp6I CCWGG 1 cut(s) 186
PspGI CCWGG 1 cut(s) 186
PsuI RGATCY 1 cut(s) 615
PvuI CGATCG 1 cut(s) 12
RsaI GTAC 2 cut(s) 28, 208
RsaNI GTAC 2 cut(s) 27, 207
RseI CAYNNNNRTG 1 cut(s) 491
SatI GCNGC 1 cut(s) 627
Sau3AI GATC 3 cut(s) 9, 13, 615
SchI GAGTC 2 cut(s) 89, 116
ScrFI CCNGG 1 cut(s) 188
SetI ASST 6 cut(s) 28, 42, 89, 352, 674, 693
SfaNI GCATC 1 cut(s) 504
SmiMI CAYNNNNRTG 1 cut(s) 491
SmlI CTYRAG 1 cut(s) 371
SmoI CTYRAG 1 cut(s) 371
Sse9I AATT 5 cut(s) 65, 310, 363, 534, 599
SsiI CCGC 3 cut(s) 119, 143, 627
SspMI CTAG 2 cut(s) 17, 582
StyD4I CCNGG 1 cut(s) 186
TaaI ACNGT 2 cut(s) 262, 577
TaiI ACGT 1 cut(s) 28
TaqI TCGA 2 cut(s) 12, 555
TasI AATT 5 cut(s) 65, 310, 363, 534, 599
TauI GCSGC 1 cut(s) 629
TfiI GAWTC 1 cut(s) 633
TscAI CASTG 1 cut(s) 267
TseFI GTSAC 2 cut(s) 92, 577
Tsp45I GTSAC 2 cut(s) 92, 577
TspDTI ATGAA 3 cut(s) 120, 414, 471
TspRI CASTG 1 cut(s) 267
Van91I CCANNNNNTGG 1 cut(s) 313
XceI RCATGY 2 cut(s) 281, 337
XspI CTAG 2 cut(s) 17, 582
Zsp2I ATGCAT 1 cut(s) 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.