pycom01g07720
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
8696186 .. 8698677
2492 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g07720.4

Sequence Viewer

Length: 1299 bp
ATGAGTTCGAGTAATGCAGTGGGTGCTACTAGCCATGAGCTTCTCGGAGCTCAAGCTCAGCTTTGGAACCACATATTCCAGTTCATAAACTCCATGTCACTCAAATGTGCAGTTCAACTAGGCATCGCAGACGTGATTCACAACCACGGCCAACCCATCTCTCTTTCTGAGCTCATCGCCGGGCTCAATGTCCACCCTTCTAAAGCTCATTTTGTCTCACGCCTCATGCTCATCCTCGTTCACTCTAATTTCTTTGCACAACATCATCATATTCATCATGATCGTGCCGATGTGGAGGAAGAAGAAGCAGTTGTATTGTATAGCCTAACACCATCTTCCAGGCTTCTTCTCAAAGACGGGCCATTAAGCACCACACCATTTTTACTCGCGACACTCGATCCGGTAGTGACAACCCCATTTCACTTGATGGGAGCTTGGTTGAAGATGAACGGTGGTGATGATCCAGCTGCTACATGTACACCATTTGAAATGGAAAATGGAATGCCCTTTTGGGAATTGGGAGCTCAGGAACCAAGGTTCGGTAACTTGTTTAATGAAGCAATGGAGGCTGACTCCAAGCTTATCGGAAGGGTGGTGGTGGAAGAGTGTGGAGGAGTTTTTGAGGGTTTGAAGTCCCTAATGGATGTTGGAGGGGGATCGATAGGAACAATGGCCAAGGCCATTGCCAATGCATTCCCCAACATCAACTGCACTGTGTTTGACCAGCCACATGTGGTGGCTGGCTTGCAGGGGACGACCCACAATTTGGGTTTTATGGGAGGAGACATGTTTGAGGAAATACCTCCTGCCAATGCAATTTTGCTCAAGTGGATTATGCATGATTGGAATGATGAAGAAAGCGTGACAATATTGAAGAAGTGCAGAGAAGCAATATCTCTAAGCAAAAACGAGGGAGGAAATAAGAAGATTATCATCATAGACATAGTTGTGGGATATGTCGATAACAAGAAGAAGATGATGGATAAGAAATCAATTGAAACTCAGCTCATGTTCGATATGTTGATGATGTCCGTCCTCCCTGGCAAAGAGCGTAGCAAATTAGAATGGGAGAAGATCTTTTTCGCTGCTGGATTCACTCACTATAACATCACTCATACACTTGGTTTGAGGATCAGAGTAAGGCTGATCCGAATACTGTTATCTCAAAAGTCAAGTCATGGACTCACTAGCTCTGGACGGAGCTGTATCAGACGGAGCAAGGTGCCACCATCACTCTACTCTGGGGCACTAGACGAAGTGCTAGCGACTCTGCTTGATGACCATGCTTGTTCTGCATGA

Protein Analysis

433

Amino Acids

47.51

Weight (kDa)

6.12

Isoelectric Point (pI)

49.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1222
AccB7I CCANNNNNTGG 1 cut(s) 766
AccII CGCG 1 cut(s) 389
AclWI GGATC 5 cut(s) 392, 455, 664, 1139, 1141
AcoI YGGCCR 2 cut(s) 148, 672
AfaI GTAC 1 cut(s) 478
AfiI CCNNNNNNNGG 2 cut(s) 539, 766
AflIII ACRYGT 3 cut(s) 473, 730, 786
AgsI TTSAA 6 cut(s) 116, 442, 488, 631, 874, 998
AjiI CACGTC 1 cut(s) 133
AjnI CCWGG 2 cut(s) 338, 1039
AjuI GAANNNNNNNTTGG 2 cut(s) 493, 525
AloI GAACNNNNNNTCC 2 cut(s) 521, 553
Alw21I GWGCWC 3 cut(s) 52, 174, 526
Alw26I GTCTC 2 cut(s) 220, 777
AlwI GGATC 5 cut(s) 392, 455, 664, 1139, 1141
AoxI GGCC 4 cut(s) 148, 359, 672, 678
ApeKI GCWGC 2 cut(s) 467, 1085
ArsI GACNNNNNNTTYG 4 cut(s) 748, 780, 1159, 1191
AspS9I GGNCC 1 cut(s) 359
AsuC2I CCSGG 1 cut(s) 181
AsuHPI GGTGA 1 cut(s) 467
AsuNHI GCTAGC 1 cut(s) 1261
BaeGI GKGCMC 1 cut(s) 1249
BalI TGGCCA 1 cut(s) 674
BanI GGYRCC 1 cut(s) 1222
BanII GRGCYC 4 cut(s) 52, 174, 186, 526
Bbv12I GWGCWC 3 cut(s) 52, 174, 526
BbvI GCAGC 2 cut(s) 454, 1072
BccI CCATC 5 cut(s) 164, 340, 421, 973, 1237
BceAI ACGGC 1 cut(s) 163
BciT130I CCWGG 2 cut(s) 340, 1041
BcnI CCSGG 1 cut(s) 181
BcoDI GTCTC 2 cut(s) 220, 777
BfaI CTAG 5 cut(s) 30, 119, 1188, 1250, 1262
BglII AGATCT 1 cut(s) 1074
BisI GCNGC 2 cut(s) 468, 1086
BlpI GCTNAGC 1 cut(s) 57
BlsI GCNGC 2 cut(s) 469, 1087
Bme1390I CCNGG 3 cut(s) 181, 340, 1041
BmgBI CACGTC 1 cut(s) 133
BmgT120I GGNCC 1 cut(s) 359
BmiI GGNNCC 3 cut(s) 68, 531, 1224
BmrFI CCNGG 3 cut(s) 181, 340, 1041
BmsI GCATC 1 cut(s) 132
BmtI GCTAGC 1 cut(s) 1265
BplI GAGNNNNNCTC 2 cut(s) 557, 589
Bpu10I CCTNAGC 1 cut(s) 525
Bpu1102I GCTNAGC 1 cut(s) 57
BpuEI CTTGAG 2 cut(s) 36, 809
BpuMI CCSGG 1 cut(s) 181
Bsa29I ATCGAT 1 cut(s) 659
BsaBI GATNNNNATC 1 cut(s) 932
BsaJI CCNNGG 4 cut(s) 145, 533, 675, 1039
BsaWI WCCGGW 1 cut(s) 400
Bsc4I CCNNNNNNNGG 2 cut(s) 539, 766
Bse1I ACTGG 1 cut(s) 79
Bse3DI GCAATG 2 cut(s) 567, 681
Bse8I GATNNNNATC 1 cut(s) 932
BseBI CCWGG 2 cut(s) 340, 1041
BseCI ATCGAT 1 cut(s) 659
BseDI CCNNGG 4 cut(s) 145, 533, 675, 1039
BseGI GGATG 2 cut(s) 231, 649
BseJI GATNNNNATC 1 cut(s) 932
BseLI CCNNNNNNNGG 2 cut(s) 539, 766
BseMI GCAATG 2 cut(s) 567, 681
BseMII CTCAG 4 cut(s) 71, 159, 539, 1016
BseNI ACTGG 1 cut(s) 79
BseRI GAGGAG 2 cut(s) 627, 795
BseSI GKGCMC 1 cut(s) 1249
BseXI GCAGC 2 cut(s) 454, 1072
BsgI GTGCAG 3 cut(s) 129, 694, 901
Bsh1236I CGCG 1 cut(s) 389
BshFI GGCC 4 cut(s) 150, 361, 674, 680
BshNI GGYRCC 1 cut(s) 1222
BshVI ATCGAT 1 cut(s) 659
BsiHKAI GWGCWC 3 cut(s) 52, 174, 526
BsiSI CCGG 2 cut(s) 180, 401
BslFI GGGAC 2 cut(s) 619, 766
BslI CCNNNNNNNGG 2 cut(s) 539, 766
BsmAI GTCTC 2 cut(s) 220, 777
BsmFI GGGAC 2 cut(s) 619, 766
BsmI GAATGC 2 cut(s) 507, 692
BsnI GGCC 4 cut(s) 150, 361, 674, 680
Bsp1286I GDGCHC 5 cut(s) 52, 174, 186, 526, 1249
Bsp1407I TGTACA 1 cut(s) 476
Bsp143I GATC 7 cut(s) 280, 397, 460, 656, 1074, 1131, 1146
Bsp1720I GCTNAGC 1 cut(s) 57
Bsp68I TCGCGA 1 cut(s) 389
BspANI GGCC 4 cut(s) 150, 361, 674, 680
BspCNI CTCAG 4 cut(s) 70, 160, 538, 1015
BspDI ATCGAT 1 cut(s) 659
BspFNI CGCG 1 cut(s) 389
BspHI TCATGA 1 cut(s) 277
BspLI GGNNCC 3 cut(s) 68, 531, 1224
BspOI GCTAGC 1 cut(s) 1265
BspPI GGATC 5 cut(s) 392, 455, 664, 1139, 1141
BspT107I GGYRCC 1 cut(s) 1222
BsrDI GCAATG 2 cut(s) 567, 681
BsrGI TGTACA 1 cut(s) 476
BsrI ACTGG 1 cut(s) 79
BssECI CCNNGG 4 cut(s) 145, 533, 675, 1039
BssMI GATC 7 cut(s) 280, 397, 460, 656, 1074, 1131, 1146
BssT1I CCWWGG 2 cut(s) 533, 675
Bst2UI CCWGG 2 cut(s) 340, 1041
Bst4CI ACNGT 3 cut(s) 452, 715, 1158
Bst6I CTCTTC 1 cut(s) 597
BstAPI GCANNNNNTGC 1 cut(s) 23
BstAUI TGTACA 1 cut(s) 476
BstC8I GCNNGC 3 cut(s) 742, 746, 1263
BstDEI CTNAG 5 cut(s) 57, 168, 525, 899, 1002
BstDSI CCRYGG 1 cut(s) 145
BstF5I GGATG 2 cut(s) 231, 649
BstFNI CGCG 1 cut(s) 389
BstKTI GATC 7 cut(s) 283, 400, 463, 659, 1077, 1134, 1149
BstMAI GTCTC 2 cut(s) 220, 777
BstMBI GATC 7 cut(s) 280, 397, 460, 656, 1074, 1131, 1146
BstMWI GCNNNNNNNGC 3 cut(s) 23, 566, 1292
BstNI CCWGG 2 cut(s) 340, 1041
BstNSI RCATGY 3 cut(s) 477, 734, 790
BstSCI CCNGG 3 cut(s) 179, 338, 1039
BstSLI GKGCMC 1 cut(s) 1249
BstUI CGCG 1 cut(s) 389
BstV1I GCAGC 2 cut(s) 454, 1072
BstX2I RGATCY 1 cut(s) 1074
BstYI RGATCY 1 cut(s) 1074
Bsu15I ATCGAT 1 cut(s) 659
BsuRI GGCC 4 cut(s) 150, 361, 674, 680
BsuTUI ATCGAT 1 cut(s) 659
BtgI CCRYGG 1 cut(s) 145
BtgZI GCGATG 2 cut(s) 109, 160
BtrI CACGTC 1 cut(s) 133
BtsCI GGATG 2 cut(s) 231, 649
BtsI GCAGTG 1 cut(s) 24
BtsIMutI CAGTG 2 cut(s) 24, 711
BtuMI TCGCGA 1 cut(s) 389
Cac8I GCNNGC 3 cut(s) 742, 746, 1263
CciI TCATGA 1 cut(s) 277
Cfr13I GGNCC 1 cut(s) 359
ClaI ATCGAT 1 cut(s) 659
Csp6I GTAC 1 cut(s) 477
CviQI GTAC 1 cut(s) 477
DdeI CTNAG 5 cut(s) 57, 168, 525, 899, 1002
DpnI GATC 7 cut(s) 282, 399, 462, 658, 1076, 1133, 1148
DpnII GATC 7 cut(s) 280, 397, 460, 656, 1074, 1131, 1146
EaeI YGGCCR 2 cut(s) 148, 672
Eam1104I CTCTTC 1 cut(s) 597
EarI CTCTTC 1 cut(s) 597
Ecl136II GAGCTC 3 cut(s) 50, 172, 524
Eco130I CCWWGG 2 cut(s) 533, 675
Eco24I GRGCYC 4 cut(s) 52, 174, 186, 526
Eco53kI GAGCTC 3 cut(s) 50, 172, 524
EcoICRI GAGCTC 3 cut(s) 50, 172, 524
EcoRII CCWGG 2 cut(s) 338, 1039
EcoT14I CCWWGG 2 cut(s) 533, 675
EcoT22I ATGCAT 2 cut(s) 694, 840
EcoT38I GRGCYC 4 cut(s) 52, 174, 186, 526
ErhI CCWWGG 2 cut(s) 533, 675
FalI AAGNNNNNCTT 2 cut(s) 45, 77
FaqI GGGAC 2 cut(s) 619, 766
Fnu4HI GCNGC 2 cut(s) 468, 1086
FokI GGATG 2 cut(s) 218, 656
FriOI GRGCYC 4 cut(s) 52, 174, 186, 526
Fsp4HI GCNGC 2 cut(s) 468, 1086
FspBI CTAG 5 cut(s) 30, 119, 1188, 1250, 1262
GluI GCNGC 2 cut(s) 468, 1086
HaeIII GGCC 4 cut(s) 150, 361, 674, 680
HapII CCGG 2 cut(s) 180, 401
HindIII AAGCTT 1 cut(s) 578
HinfI GANTC 5 cut(s) 136, 572, 1092, 1182, 1267
HpaII CCGG 2 cut(s) 180, 401
HphI GGTGA 1 cut(s) 467
Hpy166II GTNNAC 3 cut(s) 193, 241, 479
Hpy188I TCNGA 6 cut(s) 47, 169, 587, 1136, 1151, 1211
Hpy188III TCNNGA 4 cut(s) 278, 388, 527, 1194
Hpy8I GTNNAC 3 cut(s) 193, 241, 479
HpyAV CCTTC 2 cut(s) 207, 582
HpyCH4III ACNGT 3 cut(s) 452, 715, 1158
HpyCH4IV ACGT 1 cut(s) 132
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 566, 1292
HpyF3I CTNAG 5 cut(s) 57, 168, 525, 899, 1002
HpySE526I ACGT 1 cut(s) 132
Kzo9I GATC 7 cut(s) 280, 397, 460, 656, 1074, 1131, 1146
LmnI GCTCC 5 cut(s) 47, 431, 521, 1200, 1215
Lsp1109I GCAGC 2 cut(s) 454, 1072
LweI GCATC 1 cut(s) 132
MaeI CTAG 5 cut(s) 30, 119, 1188, 1250, 1262
MaeII ACGT 1 cut(s) 132
MaeIII GTNAC 4 cut(s) 96, 406, 542, 862
MalI GATC 7 cut(s) 282, 399, 462, 658, 1076, 1133, 1148
MboI GATC 7 cut(s) 280, 397, 460, 656, 1074, 1131, 1146
MfeI CAATTG 1 cut(s) 993
MflI RGATCY 1 cut(s) 1074
MhlI GDGCHC 5 cut(s) 52, 174, 186, 526, 1249
MlsI TGGCCA 1 cut(s) 674
MluCI AATT 6 cut(s) 247, 515, 763, 816, 993, 1058
MluNI TGGCCA 1 cut(s) 674
MlyI GAGTC 3 cut(s) 566, 1176, 1261
MmeI TCCRAC 1 cut(s) 628
Mox20I TGGCCA 1 cut(s) 674
Mph1103I ATGCAT 2 cut(s) 694, 840
MscI TGGCCA 1 cut(s) 674
MseI TTAA 2 cut(s) 365, 552
MslI CAYNNNNRTG 3 cut(s) 103, 282, 947
Msp20I TGGCCA 1 cut(s) 674
MspA1I CMGCKG 1 cut(s) 467
MspI CCGG 2 cut(s) 180, 401
MspR9I CCNGG 3 cut(s) 181, 340, 1041
MunI CAATTG 1 cut(s) 993
Mva1269I GAATGC 2 cut(s) 507, 692
MvaI CCWGG 2 cut(s) 340, 1041
MvnI CGCG 1 cut(s) 389
MwoI GCNNNNNNNGC 3 cut(s) 23, 566, 1292
NciI CCSGG 1 cut(s) 181
NdeII GATC 7 cut(s) 280, 397, 460, 656, 1074, 1131, 1146
NheI GCTAGC 1 cut(s) 1261
NlaIV GGNNCC 3 cut(s) 68, 531, 1224
NmuCI GTSAC 3 cut(s) 96, 406, 862
NruI TCGCGA 1 cut(s) 389
NsiI ATGCAT 2 cut(s) 694, 840
NspI RCATGY 3 cut(s) 477, 734, 790
PagI TCATGA 1 cut(s) 277
PciI ACATGT 3 cut(s) 473, 730, 786
PcsI WCGNNNNNNNCGW 1 cut(s) 393
PctI GAATGC 2 cut(s) 507, 692
PfeI GAWTC 2 cut(s) 136, 1092
PflMI CCANNNNNTGG 1 cut(s) 766
PkrI GCNGC 2 cut(s) 469, 1087
PleI GAGTC 3 cut(s) 566, 1176, 1261
PpsI GAGTC 3 cut(s) 566, 1176, 1261
PscI ACATGT 3 cut(s) 473, 730, 786
Psp124BI GAGCTC 3 cut(s) 52, 174, 526
Psp6I CCWGG 2 cut(s) 338, 1039
PspGI CCWGG 2 cut(s) 338, 1039
PspN4I GGNNCC 3 cut(s) 68, 531, 1224
PspPI GGNCC 1 cut(s) 359
PsuI RGATCY 1 cut(s) 1074
PvuII CAGCTG 1 cut(s) 467
RruI TCGCGA 1 cut(s) 389
RsaI GTAC 1 cut(s) 478
RsaNI GTAC 1 cut(s) 477
RseI CAYNNNNRTG 3 cut(s) 103, 282, 947
SacI GAGCTC 3 cut(s) 52, 174, 526
SaqAI TTAA 2 cut(s) 365, 552
SatI GCNGC 2 cut(s) 468, 1086
Sau3AI GATC 7 cut(s) 280, 397, 460, 656, 1074, 1131, 1146
Sau96I GGNCC 1 cut(s) 359
SchI GAGTC 3 cut(s) 566, 1176, 1261
ScrFI CCNGG 3 cut(s) 181, 340, 1041
SduI GDGCHC 5 cut(s) 52, 174, 186, 526, 1249
SfaNI GCATC 1 cut(s) 132
SmiMI CAYNNNNRTG 3 cut(s) 103, 282, 947
SmlI CTYRAG 2 cut(s) 51, 824
SmoI CTYRAG 2 cut(s) 51, 824
Sse9I AATT 6 cut(s) 247, 515, 763, 816, 993, 1058
SspI AATATT 1 cut(s) 870
SspMI CTAG 5 cut(s) 30, 119, 1188, 1250, 1262
SstI GAGCTC 3 cut(s) 52, 174, 526
StyD4I CCNGG 3 cut(s) 179, 338, 1039
StyI CCWWGG 2 cut(s) 533, 675
TaaI ACNGT 3 cut(s) 452, 715, 1158
TaiI ACGT 1 cut(s) 135
TaqI TCGA 5 cut(s) 8, 396, 659, 960, 1014
TasI AATT 6 cut(s) 247, 515, 763, 816, 993, 1058
TatI WGTACW 1 cut(s) 476
TfiI GAWTC 2 cut(s) 136, 1092
Tru1I TTAA 2 cut(s) 365, 552
Tru9I TTAA 2 cut(s) 365, 552
TscAI CASTG 2 cut(s) 24, 718
TseFI GTSAC 3 cut(s) 96, 406, 862
TseI GCWGC 2 cut(s) 467, 1085
Tsp45I GTSAC 3 cut(s) 96, 406, 862
TspDTI ATGAA 5 cut(s) 73, 263, 461, 570, 867
TspGWI ACGGA 3 cut(s) 1021, 1213, 1228
TspRI CASTG 2 cut(s) 24, 718
Van91I CCANNNNNTGG 1 cut(s) 766
XceI RCATGY 3 cut(s) 477, 734, 790
XspI CTAG 5 cut(s) 30, 119, 1188, 1250, 1262
Zsp2I ATGCAT 2 cut(s) 694, 840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.