Prupe.3G118900_v2.0.a1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
10314539 .. 10319446
4908 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G118900.1

Sequence Viewer

Length: 1059 bp
ATGTCATTAAAGTGTGAAGTTCAATTAGGCATCCCAGATGTGATTCACAACCATGGCCAACCCATATCCCTTTCCAATCTCATTTTCGGCCACAATGTCCACCCTTCGAAAGCTCATTTCATCGCATGCCTCATGCGAATCCTCGTCCACTCCAATTTCTTTGCACAAGACCAGCAAGTTCAGCTACCACTTCGTCCAAACAATAATAACAGCAATGAGAATATTGTTCATCAGGATCTTGATGATGAAGCGGAGGAAAAAACTGTTGTGGCGTATAGCCTAACACCAGCTTCCGGGCTTCTCCTCAAGGAAGGTACATTAAGCACCACACAATTTTTACTTATGATTCTTGATCCAGTAGTGACAGATCCATTTCATCTAATGGGCACTTGGTGCCAGATGAACAATCATGGAAATCTTGATCATCCAGCTTCCCCATTTGAGATGGCACATGGAAGGCCTTTTTGGGGTTTGGCTGCTCAGCAACCAAAGTTTGCAAGGGCAGTAGTTGAAGAGTGTGAAGGAGTTTTTGAGGGTTTGAACTCCTTGGTTGATGTTGGAGGTGGCACAGGAACCACGGCCAAGGCCATTGCCAAGGCCTTCCCCAACATTAATTGCACTGTCTTTGACCAACCACATGTTGTCGCAAACTTGCAAGGGACTCACAATCTGGATTTTGTTGGAGGAGACATGTTTGAGAAGATACCCCCAGCAAATGCAATTTTCCTCAAGTGGATTATGCATGATTGGAGTGATGAGGAAAGAGTGAAGATATTAAAGAAGAGTAGAGAAGCAATTCTGAGCAAAAATGAAGTAGGAAAGGTTATCATCCTGGATATAAATGTGTCTGCAGATAATACGAAGATGGATAAGAAATCAATTGAAACTCAGCTCATCAATATTATGATGATGGTCGACCTCAGTGGCAAAAAGCGTAGTGAAGCAGAGTGGGAAAAGCTCTTTCTGACTGCTGGATTCTCTCACTATAAGATAACACATACATTGAGCCTAAGGTCTCTTATCGAAGTTTACCCCAGAAAAAAAGAATCACTCTTTTAA

Protein Analysis

353

Amino Acids

39.33

Weight (kDa)

6.05

Isoelectric Point (pI)

40.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 393
AccI GTMKAC 1 cut(s) 915
AciI CCGC 1 cut(s) 251
AclWI GGATC 3 cut(s) 243, 347, 362
AcoI YGGCCR 3 cut(s) 55, 88, 579
AdeI CACNNNGTG 1 cut(s) 393
AfaI GTAC 1 cut(s) 316
AfiI CCNNNNNNNGG 2 cut(s) 293, 467
AflIII ACRYGT 2 cut(s) 637, 690
AgsI TTSAA 4 cut(s) 23, 512, 541, 884
AjnI CCWGG 1 cut(s) 831
AjuI GAANNNNNNNTTGG 4 cut(s) 68, 100, 448, 480
AluBI AGCT 6 cut(s) 113, 184, 290, 431, 892, 958
AluI AGCT 6 cut(s) 113, 184, 290, 431, 892, 958
Alw26I GTCTC 2 cut(s) 681, 1020
AlwI GGATC 3 cut(s) 243, 347, 362
AoxI GGCC 6 cut(s) 55, 88, 458, 579, 585, 597
ApeKI GCWGC 1 cut(s) 476
AseI ATTAAT 1 cut(s) 612
Asp700I GAANNNNTTC 1 cut(s) 795
AsuC2I CCSGG 1 cut(s) 295
AsuII TTCGAA 1 cut(s) 107
AxyI CCTNAGG 1 cut(s) 1010
BaeGI GKGCMC 1 cut(s) 389
BalI TGGCCA 1 cut(s) 57
BanI GGYRCC 1 cut(s) 393
BbvI GCAGC 1 cut(s) 463
BccI CCATC 3 cut(s) 439, 859, 904
BceAI ACGGC 1 cut(s) 594
BciT130I CCWGG 1 cut(s) 833
BclI TGATCA 1 cut(s) 421
BcnI CCSGG 1 cut(s) 295
BcoDI GTCTC 2 cut(s) 681, 1020
BfmI CTRYAG 1 cut(s) 849
BisI GCNGC 1 cut(s) 477
BlpI GCTNAGC 1 cut(s) 480
BlsI GCNGC 1 cut(s) 478
Bme1390I CCNGG 2 cut(s) 295, 833
BmiI GGNNCC 2 cut(s) 395, 574
BmrFI CCNGG 2 cut(s) 295, 833
BmsI GCATC 1 cut(s) 39
Bpu1102I GCTNAGC 1 cut(s) 480
Bpu14I TTCGAA 1 cut(s) 107
BpuEI CTTGAG 2 cut(s) 290, 713
BpuMI CCSGG 1 cut(s) 295
BsaI GGTCTC 1 cut(s) 1020
BsaJI CCNNGG 5 cut(s) 52, 546, 576, 582, 594
Bsc4I CCNNNNNNNGG 2 cut(s) 293, 467
Bse1I ACTGG 1 cut(s) 356
Bse21I CCTNAGG 1 cut(s) 1010
Bse3DI GCAATG 2 cut(s) 220, 588
BseBI CCWGG 1 cut(s) 833
BseDI CCNNGG 5 cut(s) 52, 546, 576, 582, 594
BseGI GGATG 3 cut(s) 30, 424, 828
BseLI CCNNNNNNNGG 2 cut(s) 293, 467
BseMI GCAATG 2 cut(s) 220, 588
BseMII CTCAG 4 cut(s) 494, 791, 902, 934
BseNI ACTGG 1 cut(s) 356
BseRI GAGGAG 2 cut(s) 293, 699
BseSI GKGCMC 1 cut(s) 389
BseXI GCAGC 1 cut(s) 463
BseYI CCCAGC 1 cut(s) 709
BshFI GGCC 6 cut(s) 57, 90, 460, 581, 587, 599
BshNI GGYRCC 1 cut(s) 393
BsiSI CCGG 1 cut(s) 294
BslFI GGGAC 1 cut(s) 673
BslI CCNNNNNNNGG 2 cut(s) 293, 467
BsmAI GTCTC 2 cut(s) 681, 1020
BsmFI GGGAC 1 cut(s) 673
BsnI GGCC 6 cut(s) 57, 90, 460, 581, 587, 599
Bso31I GGTCTC 1 cut(s) 1020
Bsp119I TTCGAA 1 cut(s) 107
Bsp1286I GDGCHC 1 cut(s) 389
Bsp143I GATC 4 cut(s) 235, 352, 367, 421
Bsp1720I GCTNAGC 1 cut(s) 480
Bsp19I CCATGG 1 cut(s) 52
BspACI CCGC 1 cut(s) 251
BspANI GGCC 6 cut(s) 57, 90, 460, 581, 587, 599
BspCNI CTCAG 4 cut(s) 493, 792, 901, 933
BspLI GGNNCC 2 cut(s) 395, 574
BspMAI CTGCAG 1 cut(s) 853
BspPI GGATC 3 cut(s) 243, 347, 362
BspT104I TTCGAA 1 cut(s) 107
BspT107I GGYRCC 1 cut(s) 393
BspTNI GGTCTC 1 cut(s) 1020
BsrDI GCAATG 2 cut(s) 220, 588
BsrI ACTGG 1 cut(s) 356
BssECI CCNNGG 5 cut(s) 52, 546, 576, 582, 594
BssMI GATC 4 cut(s) 235, 352, 367, 421
BssT1I CCWWGG 4 cut(s) 52, 546, 582, 594
Bst2UI CCWGG 1 cut(s) 833
Bst4CI ACNGT 2 cut(s) 265, 622
Bst6I CTCTTC 2 cut(s) 507, 776
BstAPI GCANNNNNTGC 1 cut(s) 393
BstBI TTCGAA 1 cut(s) 107
BstC8I GCNNGC 1 cut(s) 127
BstDEI CTNAG 5 cut(s) 480, 800, 888, 920, 1010
BstDSI CCRYGG 2 cut(s) 52, 576
BstF5I GGATG 3 cut(s) 30, 424, 828
BstKTI GATC 4 cut(s) 238, 355, 370, 424
BstMAI GTCTC 2 cut(s) 681, 1020
BstMBI GATC 4 cut(s) 235, 352, 367, 421
BstMWI GCNNNNNNNGC 2 cut(s) 181, 393
BstNI CCWGG 1 cut(s) 833
BstNSI RCATGY 3 cut(s) 129, 641, 694
BstSCI CCNGG 2 cut(s) 293, 831
BstSFI CTRYAG 1 cut(s) 849
BstSLI GKGCMC 1 cut(s) 389
BstV1I GCAGC 1 cut(s) 463
BstX2I RGATCY 2 cut(s) 235, 367
BstYI RGATCY 2 cut(s) 235, 367
Bsu36I CCTNAGG 1 cut(s) 1010
BsuRI GGCC 6 cut(s) 57, 90, 460, 581, 587, 599
BtgI CCRYGG 2 cut(s) 52, 576
BtgZI GCGATG 1 cut(s) 106
BtsCI GGATG 3 cut(s) 30, 424, 828
BtsIMutI CAGTG 2 cut(s) 618, 928
Cac8I GCNNGC 1 cut(s) 127
Csp6I GTAC 1 cut(s) 315
CviAII CATG 8 cut(s) 53, 126, 133, 410, 452, 638, 691, 743
CviQI GTAC 1 cut(s) 315
DdeI CTNAG 5 cut(s) 480, 800, 888, 920, 1010
DpnI GATC 4 cut(s) 237, 354, 369, 423
DpnII GATC 4 cut(s) 235, 352, 367, 421
DraIII CACNNNGTG 1 cut(s) 393
EaeI YGGCCR 3 cut(s) 55, 88, 579
Eam1104I CTCTTC 2 cut(s) 507, 776
EarI CTCTTC 2 cut(s) 507, 776
Eco130I CCWWGG 4 cut(s) 52, 546, 582, 594
Eco147I AGGCCT 2 cut(s) 460, 599
Eco31I GGTCTC 1 cut(s) 1020
Eco81I CCTNAGG 1 cut(s) 1010
EcoRII CCWGG 1 cut(s) 831
EcoT14I CCWWGG 4 cut(s) 52, 546, 582, 594
EcoT22I ATGCAT 1 cut(s) 744
ErhI CCWWGG 4 cut(s) 52, 546, 582, 594
FaeI CATG 8 cut(s) 56, 129, 136, 413, 455, 641, 694, 746
FaqI GGGAC 1 cut(s) 673
FatI CATG 8 cut(s) 52, 125, 132, 409, 451, 637, 690, 742
FbaI TGATCA 1 cut(s) 421
FblI GTMKAC 1 cut(s) 915
Fnu4HI GCNGC 1 cut(s) 477
FokI GGATG 3 cut(s) 17, 411, 815
Fsp4HI GCNGC 1 cut(s) 477
GluI GCNGC 1 cut(s) 477
GsaI CCCAGC 1 cut(s) 713
HaeIII GGCC 6 cut(s) 57, 90, 460, 581, 587, 599
HapII CCGG 1 cut(s) 294
Hin1II CATG 8 cut(s) 56, 129, 136, 413, 455, 641, 694, 746
HincII GTYRAC 1 cut(s) 916
HindII GTYRAC 1 cut(s) 916
HinfI GANTC 6 cut(s) 43, 138, 346, 661, 975, 1046
HpaII CCGG 1 cut(s) 294
Hpy166II GTNNAC 4 cut(s) 100, 148, 916, 1030
Hpy188I TCNGA 2 cut(s) 801, 966
Hpy188III TCNNGA 5 cut(s) 233, 239, 350, 419, 671
Hpy8I GTNNAC 4 cut(s) 100, 148, 916, 1030
HpyAV CCTTC 5 cut(s) 114, 305, 450, 515, 610
HpyCH4III ACNGT 2 cut(s) 265, 622
HpyCH4V TGCA 7 cut(s) 164, 497, 618, 655, 719, 742, 851
HpyF10VI GCNNNNNNNGC 2 cut(s) 181, 393
HpyF3I CTNAG 5 cut(s) 480, 800, 888, 920, 1010
Hsp92II CATG 8 cut(s) 56, 129, 136, 413, 455, 641, 694, 746
Ksp22I TGATCA 1 cut(s) 421
Kzo9I GATC 4 cut(s) 235, 352, 367, 421
Lsp1109I GCAGC 1 cut(s) 463
LweI GCATC 1 cut(s) 39
MaeIII GTNAC 1 cut(s) 361
MalI GATC 4 cut(s) 237, 354, 369, 423
MboI GATC 4 cut(s) 235, 352, 367, 421
MboII GAAGA 5 cut(s) 524, 712, 781, 793, 874
MfeI CAATTG 1 cut(s) 879
MflI RGATCY 2 cut(s) 235, 367
MhlI GDGCHC 1 cut(s) 389
MlsI TGGCCA 1 cut(s) 57
MluCI AATT 7 cut(s) 23, 154, 332, 613, 720, 795, 879
MluNI TGGCCA 1 cut(s) 57
MlyI GAGTC 1 cut(s) 655
MmeI TCCRAC 2 cut(s) 538, 661
Mox20I TGGCCA 1 cut(s) 57
Mph1103I ATGCAT 1 cut(s) 744
MroXI GAANNNNTTC 1 cut(s) 795
MscI TGGCCA 1 cut(s) 57
MseI TTAA 5 cut(s) 8, 320, 612, 776, 1057
MslI CAYNNNNRTG 2 cut(s) 10, 51
Msp20I TGGCCA 1 cut(s) 57
MspI CCGG 1 cut(s) 294
MspR9I CCNGG 2 cut(s) 295, 833
MunI CAATTG 1 cut(s) 879
MvaI CCWGG 1 cut(s) 833
MwoI GCNNNNNNNGC 2 cut(s) 181, 393
NciI CCSGG 1 cut(s) 295
NcoI CCATGG 1 cut(s) 52
NdeII GATC 4 cut(s) 235, 352, 367, 421
NlaIII CATG 8 cut(s) 56, 129, 136, 413, 455, 641, 694, 746
NlaIV GGNNCC 2 cut(s) 395, 574
NmuCI GTSAC 1 cut(s) 361
NsiI ATGCAT 1 cut(s) 744
NspI RCATGY 3 cut(s) 129, 641, 694
NspV TTCGAA 1 cut(s) 107
PaeI GCATGC 1 cut(s) 129
PceI AGGCCT 2 cut(s) 460, 599
PciI ACATGT 2 cut(s) 637, 690
PdmI GAANNNNTTC 1 cut(s) 795
PfeI GAWTC 5 cut(s) 43, 138, 346, 975, 1046
PfoI TCCNGGA 1 cut(s) 831
PkrI GCNGC 1 cut(s) 478
PleI GAGTC 1 cut(s) 655
PpsI GAGTC 1 cut(s) 655
PscI ACATGT 2 cut(s) 637, 690
PshBI ATTAAT 1 cut(s) 612
Psp6I CCWGG 1 cut(s) 831
PspFI CCCAGC 1 cut(s) 709
PspGI CCWGG 1 cut(s) 831
PspN4I GGNNCC 2 cut(s) 395, 574
PstI CTGCAG 1 cut(s) 853
PsuI RGATCY 2 cut(s) 235, 367
RsaI GTAC 1 cut(s) 316
RsaNI GTAC 1 cut(s) 315
RseI CAYNNNNRTG 2 cut(s) 10, 51
SalI GTCGAC 1 cut(s) 914
SaqAI TTAA 5 cut(s) 8, 320, 612, 776, 1057
SatI GCNGC 1 cut(s) 477
Sau3AI GATC 4 cut(s) 235, 352, 367, 421
SchI GAGTC 1 cut(s) 655
ScrFI CCNGG 2 cut(s) 295, 833
SduI GDGCHC 1 cut(s) 389
SfaNI GCATC 1 cut(s) 39
SfcI CTRYAG 1 cut(s) 849
SfuI TTCGAA 1 cut(s) 107
SmiMI CAYNNNNRTG 2 cut(s) 10, 51
SmlI CTYRAG 2 cut(s) 305, 728
SmoI CTYRAG 2 cut(s) 305, 728
SphI GCATGC 1 cut(s) 129
Sse9I AATT 7 cut(s) 23, 154, 332, 613, 720, 795, 879
SseBI AGGCCT 2 cut(s) 460, 599
SsiI CCGC 1 cut(s) 251
SspI AATATT 2 cut(s) 223, 901
StuI AGGCCT 2 cut(s) 460, 599
StyD4I CCNGG 2 cut(s) 293, 831
StyI CCWWGG 4 cut(s) 52, 546, 582, 594
TaaI ACNGT 2 cut(s) 265, 622
TaqI TCGA 3 cut(s) 107, 915, 1023
TasI AATT 7 cut(s) 23, 154, 332, 613, 720, 795, 879
TfiI GAWTC 5 cut(s) 43, 138, 346, 975, 1046
Tru1I TTAA 5 cut(s) 8, 320, 612, 776, 1057
Tru9I TTAA 5 cut(s) 8, 320, 612, 776, 1057
TscAI CASTG 2 cut(s) 625, 928
TseFI GTSAC 1 cut(s) 361
TseI GCWGC 1 cut(s) 476
Tsp45I GTSAC 1 cut(s) 361
TspDTI ATGAA 6 cut(s) 109, 218, 261, 365, 416, 825
TspRI CASTG 2 cut(s) 625, 928
VspI ATTAAT 1 cut(s) 612
XceI RCATGY 3 cut(s) 129, 641, 694
XmiI GTMKAC 1 cut(s) 915
XmnI GAANNNNTTC 1 cut(s) 795
Zsp2I ATGCAT 1 cut(s) 744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.