pycom01g07750
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
8751076 .. 8752077
1002 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g07750.1

Sequence Viewer

Length: 726 bp
ATGGGAGCTTGGTTGCAGATGAACGGTGGTGATGATCCAGCTACTATATGTACACCATTTGAAATGGAAAATGGAATGCCCTTTTGGGATCTGGCAGCTCAGGAACCAAGGTTCGGTAACTTGTTTGATGAAGCAATGGAGGCTGACTCCAAGCTTCTCGGAAGGGAGGTGGTGGAAGAGTGTGGAGGAGTTTTTGAGGGCTTGAAATCCCTGGTGGATGTTGGAGGAGGAACAGGAGCCATGGCCAAGGCCATTGCCAATGCATTCCCCAGCATCAACTGCATTGTGTTTGACCAACCACATGTGGTGGCTGACTTGCAAGGAACCACCCATAATTTGGGTTTTGTGGGGGGAGACATGTTTGTGGAAATACCCCCAGCAAATGCAATTTTGCTCAAGTGGATTCTGCATGATTGGAGCGATGAAGAAAGTGTGAAGATATTGAAGAAGTGTAGAGAAGCAATACTTCTGAGCAAAAACGATGAAGGGAATAAGAAGATTATCATCATAGACATAGTTGTGGGACATGTCGATAACAAGGAGAAGATGGTGGATAAGAAATCAATCGAAACCCAACTGATGTTTGATATGCTGATGATGTCTGCCTTCACTGGCAAAGAGCGTAGCGAATCAGAATGGAAAAAGATCTTTTTGGCTGCTAGTTTCACTCATTATAACATCACTCATACGTTCGGTTTCAGATCTCTTATTGAACTTTACCCTTGA

Protein Analysis

242

Amino Acids

26.77

Weight (kDa)

4.82

Isoelectric Point (pI)

45.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_2 PF00891 18 - 222 9.8e-49 O-methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 675
AccB7I CCANNNNNTGG 1 cut(s) 337
AclWI GGATC 2 cut(s) 29, 96
AcoI YGGCCR 1 cut(s) 243
AfaI GTAC 1 cut(s) 52
AfiI CCNNNNNNNGG 2 cut(s) 113, 337
AflIII ACRYGT 3 cut(s) 301, 357, 526
AgsI TTSAA 4 cut(s) 62, 205, 445, 713
AjnI CCWGG 1 cut(s) 210
AjuI GAANNNNNNNTTGG 2 cut(s) 67, 99
AloI GAACNNNNNNTCC 2 cut(s) 95, 127
AluBI AGCT 4 cut(s) 8, 41, 98, 154
AluI AGCT 4 cut(s) 8, 41, 98, 154
Alw26I GTCTC 1 cut(s) 348
AlwI GGATC 2 cut(s) 29, 96
AoxI GGCC 2 cut(s) 243, 249
ApeKI GCWGC 2 cut(s) 95, 656
AsuHPI GGTGA 1 cut(s) 41
BalI TGGCCA 1 cut(s) 245
BbvI GCAGC 2 cut(s) 107, 643
BccI CCATC 1 cut(s) 541
BciT130I CCWGG 1 cut(s) 212
BcoDI GTCTC 1 cut(s) 348
BfaI CTAG 1 cut(s) 660
BglII AGATCT 2 cut(s) 645, 701
BisI GCNGC 2 cut(s) 96, 657
BlsI GCNGC 2 cut(s) 97, 658
Bme1390I CCNGG 1 cut(s) 212
BmiI GGNNCC 3 cut(s) 105, 238, 325
BmrFI CCNGG 1 cut(s) 212
BmsI GCATC 1 cut(s) 282
BplI GAGNNNNNCTC 2 cut(s) 131, 163
Bpu10I CCTNAGC 1 cut(s) 99
BpuEI CTTGAG 1 cut(s) 380
BsaBI GATNNNNATC 1 cut(s) 503
BsaJI CCNNGG 4 cut(s) 107, 210, 240, 246
Bsc4I CCNNNNNNNGG 2 cut(s) 113, 337
Bse1I ACTGG 1 cut(s) 616
Bse3DI GCAATG 2 cut(s) 141, 252
Bse8I GATNNNNATC 1 cut(s) 503
BseBI CCWGG 1 cut(s) 212
BseDI CCNNGG 4 cut(s) 107, 210, 240, 246
BseGI GGATG 1 cut(s) 223
BseJI GATNNNNATC 1 cut(s) 503
BseLI CCNNNNNNNGG 2 cut(s) 113, 337
BseMI GCAATG 2 cut(s) 141, 252
BseMII CTCAG 2 cut(s) 113, 461
BseNI ACTGG 1 cut(s) 616
BseRI GAGGAG 2 cut(s) 201, 240
BseXI GCAGC 2 cut(s) 107, 643
BseYI CCCAGC 2 cut(s) 269, 376
BshFI GGCC 2 cut(s) 245, 251
BslFI GGGAC 1 cut(s) 537
BslI CCNNNNNNNGG 2 cut(s) 113, 337
BsmAI GTCTC 1 cut(s) 348
BsmFI GGGAC 1 cut(s) 537
BsmI GAATGC 2 cut(s) 81, 263
BsnI GGCC 2 cut(s) 245, 251
Bsp1407I TGTACA 1 cut(s) 50
Bsp143I GATC 4 cut(s) 34, 88, 645, 701
Bsp19I CCATGG 1 cut(s) 240
BspANI GGCC 2 cut(s) 245, 251
BspCNI CTCAG 2 cut(s) 112, 462
BspLI GGNNCC 3 cut(s) 105, 238, 325
BspPI GGATC 2 cut(s) 29, 96
BsrDI GCAATG 2 cut(s) 141, 252
BsrGI TGTACA 1 cut(s) 50
BsrI ACTGG 1 cut(s) 616
BssECI CCNNGG 4 cut(s) 107, 210, 240, 246
BssMI GATC 4 cut(s) 34, 88, 645, 701
BssT1I CCWWGG 3 cut(s) 107, 240, 246
Bst2UI CCWGG 1 cut(s) 212
Bst4CI ACNGT 1 cut(s) 26
Bst6I CTCTTC 1 cut(s) 171
BstAPI GCANNNNNTGC 1 cut(s) 279
BstAUI TGTACA 1 cut(s) 50
BstDEI CTNAG 2 cut(s) 99, 470
BstDSI CCRYGG 1 cut(s) 240
BstF5I GGATG 1 cut(s) 223
BstKTI GATC 4 cut(s) 37, 91, 648, 704
BstMAI GTCTC 1 cut(s) 348
BstMBI GATC 4 cut(s) 34, 88, 645, 701
BstMWI GCNNNNNNNGC 2 cut(s) 140, 279
BstNI CCWGG 1 cut(s) 212
BstNSI RCATGY 3 cut(s) 305, 361, 530
BstSCI CCNGG 1 cut(s) 210
BstV1I GCAGC 2 cut(s) 107, 643
BstX2I RGATCY 3 cut(s) 88, 645, 701
BstYI RGATCY 3 cut(s) 88, 645, 701
BsuRI GGCC 2 cut(s) 245, 251
BtgI CCRYGG 1 cut(s) 240
BtgZI GCGATG 1 cut(s) 435
BtsCI GGATG 1 cut(s) 223
BtsIMutI CAGTG 1 cut(s) 609
Csp6I GTAC 1 cut(s) 51
CviAII CATG 5 cut(s) 241, 302, 358, 410, 527
CviQI GTAC 1 cut(s) 51
DdeI CTNAG 2 cut(s) 99, 470
DpnI GATC 4 cut(s) 36, 90, 647, 703
DpnII GATC 4 cut(s) 34, 88, 645, 701
EaeI YGGCCR 1 cut(s) 243
Eam1104I CTCTTC 1 cut(s) 171
EarI CTCTTC 1 cut(s) 171
Eco130I CCWWGG 3 cut(s) 107, 240, 246
EcoRII CCWGG 1 cut(s) 210
EcoT14I CCWWGG 3 cut(s) 107, 240, 246
EcoT22I ATGCAT 1 cut(s) 265
ErhI CCWWGG 3 cut(s) 107, 240, 246
FaeI CATG 5 cut(s) 244, 305, 361, 413, 530
FalI AAGNNNNNCTT 2 cut(s) 450, 482
FaqI GGGAC 1 cut(s) 537
FatI CATG 5 cut(s) 240, 301, 357, 409, 526
Fnu4HI GCNGC 2 cut(s) 96, 657
FokI GGATG 1 cut(s) 230
Fsp4HI GCNGC 2 cut(s) 96, 657
FspBI CTAG 1 cut(s) 660
GluI GCNGC 2 cut(s) 96, 657
GsaI CCCAGC 2 cut(s) 273, 380
HaeIII GGCC 2 cut(s) 245, 251
Hin1II CATG 5 cut(s) 244, 305, 361, 413, 530
HindIII AAGCTT 1 cut(s) 152
HinfI GANTC 3 cut(s) 146, 403, 629
HphI GGTGA 1 cut(s) 41
Hpy166II GTNNAC 1 cut(s) 53
Hpy188I TCNGA 4 cut(s) 161, 471, 634, 701
Hpy188III TCNNGA 1 cut(s) 101
Hpy8I GTNNAC 1 cut(s) 53
HpyAV CCTTC 3 cut(s) 156, 479, 616
HpyCH4III ACNGT 1 cut(s) 26
HpyCH4IV ACGT 1 cut(s) 689
HpyCH4V TGCA 6 cut(s) 16, 263, 282, 319, 386, 409
HpyF10VI GCNNNNNNNGC 2 cut(s) 140, 279
HpyF3I CTNAG 2 cut(s) 99, 470
HpySE526I ACGT 1 cut(s) 689
Hsp92II CATG 5 cut(s) 244, 305, 361, 413, 530
Kzo9I GATC 4 cut(s) 34, 88, 645, 701
LmnI GCTCC 3 cut(s) 5, 236, 417
LpnPI CCDG 9 cut(s) 51, 77, 86, 197, 219, 224, 283, 390, 597
Lsp1109I GCAGC 2 cut(s) 107, 643
LweI GCATC 1 cut(s) 282
MaeI CTAG 1 cut(s) 660
MaeII ACGT 1 cut(s) 689
MaeIII GTNAC 1 cut(s) 116
MalI GATC 4 cut(s) 36, 90, 647, 703
MboI GATC 4 cut(s) 34, 88, 645, 701
MboII GAAGA 6 cut(s) 188, 437, 448, 457, 508, 556
MflI RGATCY 3 cut(s) 88, 645, 701
MlsI TGGCCA 1 cut(s) 245
MluCI AATT 2 cut(s) 334, 387
MluNI TGGCCA 1 cut(s) 245
MlyI GAGTC 1 cut(s) 140
MmeI TCCRAC 1 cut(s) 202
MnlI CCTC 6 cut(s) 133, 160, 179, 190, 218, 221
Mox20I TGGCCA 1 cut(s) 245
Mph1103I ATGCAT 1 cut(s) 265
MscI TGGCCA 1 cut(s) 245
MslI CAYNNNNRTG 2 cut(s) 362, 518
Msp20I TGGCCA 1 cut(s) 245
MspR9I CCNGG 1 cut(s) 212
Mva1269I GAATGC 2 cut(s) 81, 263
MvaI CCWGG 1 cut(s) 212
MwoI GCNNNNNNNGC 2 cut(s) 140, 279
NcoI CCATGG 1 cut(s) 240
NdeII GATC 4 cut(s) 34, 88, 645, 701
NlaIII CATG 5 cut(s) 244, 305, 361, 413, 530
NlaIV GGNNCC 3 cut(s) 105, 238, 325
NsiI ATGCAT 1 cut(s) 265
NspI RCATGY 3 cut(s) 305, 361, 530
PciI ACATGT 3 cut(s) 301, 357, 526
PctI GAATGC 2 cut(s) 81, 263
PfeI GAWTC 2 cut(s) 403, 629
PflMI CCANNNNNTGG 1 cut(s) 337
PkrI GCNGC 2 cut(s) 97, 658
PleI GAGTC 1 cut(s) 140
PpsI GAGTC 1 cut(s) 140
PscI ACATGT 3 cut(s) 301, 357, 526
PsiI TTATAA 1 cut(s) 675
Psp6I CCWGG 1 cut(s) 210
PspFI CCCAGC 2 cut(s) 269, 376
PspGI CCWGG 1 cut(s) 210
PspN4I GGNNCC 3 cut(s) 105, 238, 325
PsuI RGATCY 3 cut(s) 88, 645, 701
RsaI GTAC 1 cut(s) 52
RsaNI GTAC 1 cut(s) 51
RseI CAYNNNNRTG 2 cut(s) 362, 518
SatI GCNGC 2 cut(s) 96, 657
Sau3AI GATC 4 cut(s) 34, 88, 645, 701
SchI GAGTC 1 cut(s) 140
ScrFI CCNGG 1 cut(s) 212
SetI ASST 7 cut(s) 10, 43, 100, 113, 156, 171, 692
SfaNI GCATC 1 cut(s) 282
SmiMI CAYNNNNRTG 2 cut(s) 362, 518
SmlI CTYRAG 1 cut(s) 395
SmoI CTYRAG 1 cut(s) 395
Sse9I AATT 2 cut(s) 334, 387
SspMI CTAG 1 cut(s) 660
StyD4I CCNGG 1 cut(s) 210
StyI CCWWGG 3 cut(s) 107, 240, 246
TaaI ACNGT 1 cut(s) 26
TaiI ACGT 1 cut(s) 692
TaqI TCGA 2 cut(s) 531, 567
TasI AATT 2 cut(s) 334, 387
TatI WGTACW 1 cut(s) 50
TfiI GAWTC 2 cut(s) 403, 629
TscAI CASTG 1 cut(s) 616
TseI GCWGC 2 cut(s) 95, 656
TspDTI ATGAA 4 cut(s) 35, 144, 438, 498
TspRI CASTG 1 cut(s) 616
Van91I CCANNNNNTGG 1 cut(s) 337
XceI RCATGY 3 cut(s) 305, 361, 530
XcmI CCANNNNNNNNNTGG 1 cut(s) 334
XspI CTAG 1 cut(s) 660
Zsp2I ATGCAT 1 cut(s) 265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.