Prupe.3G129400_v2.0.a1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
13128579 .. 13130009
1431 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G129400.1

Sequence Viewer

Length: 1068 bp
ATGGGTAGTGAAGTGAGAGCAAGTCATGAGCTACTCCAAGCACAAGCCCACATTTGGAACCACATTTTCAGCTTCATAAATTCCATGTCCCTCAAATGTGCAGTTCAATTAGATATCCCAGATGTCATCCAAAAACATGGCCAACCCATGATTCTTTCCGAGCTTGTCTCCGCCCTACCAATTTCCCCAACAAAAGCTCATTTCATCCCACGCCTCATGCGAATCTTAGTCCACTCCGGCTTCTTTGCCAAAGAAAGTCTGAGTGGTGGCAGCGAACAAGGTTATGTACTAACAGACGCCTCCGCACTCCTCCTGAAAGACAATCCCATGAGCACAAGGCCCTTCTTACTTGCCATGCTCAATCCCATCTTAACCGATCCATGGCAGTATTTGACCACTTGGTTCCAAAATGACAATCCTACGCCGTTTCACGTAGTGCATGGGATGACATTTTGGGATTATGGCAACCAGGACCCGACTCTTGCACATTTTTTCAATGACGCCATGGCTAGCGATGCCCGGTTGATCTCGAGCTTGATGATAGATGACTTCAAGGGGGTGTTTCAAGGAGTGGATTCGTTGGTTGACGTGGGCGGTGGGACGGGAACCGTGGCCAAGTCCATTGCTAATGCCTTTCCTCATATGAAATGCACTGTATTTGATCTCCCTCATGTAGTTGCTGACCTAAAAGGAAGTAAGAACATGGAATATGTTGCAGGGGACATGTTTGAGGCTGTTCCTGCGGCGGATGCTATTTTTTTGAAGTGGATATTGCATGACTGGAGTGATGAAGAATGCGTGAAAATACTTGAGCGATGTAAAAAGGCAATTACAAGAGAGGGTAAGAAAGGCAAGGTGATTATCGTAGATATGACGGTGGAGAACAAGAATAAAGATAAGGAATCTGGGGAAACACAACTTTTCTTCGATATGCTGATGATGGTCTTGGTTAAAGGAAAAGAAAGGAATGACAAAGAATGGGCTAAGCTCTTTTCTGACGCAGGTTTCAGCCACTATAAGATTACTCCCTATTTGGGTTTAAGGTCTCTCATTGAGGTTTATCCTTGA

Protein Analysis

356

Amino Acids

39.79

Weight (kDa)

5.9

Isoelectric Point (pI)

26.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 992
AciI CCGC 5 cut(s) 171, 303, 594, 743, 746
AclWI GGATC 1 cut(s) 371
AcoI YGGCCR 2 cut(s) 139, 612
AcsI RAATTY 1 cut(s) 79
AcyI GRCGYC 2 cut(s) 297, 501
AdeI CACNNNGTG 1 cut(s) 436
AfaI GTAC 1 cut(s) 288
AfiI CCNNNNNNNGG 3 cut(s) 54, 381, 1034
AflIII ACRYGT 1 cut(s) 723
AgsI TTSAA 5 cut(s) 107, 496, 553, 566, 763
AjiI CACGTC 1 cut(s) 589
AjnI CCWGG 1 cut(s) 468
AjuI GAANNNNNNNTTGG 2 cut(s) 135, 167
AluBI AGCT 6 cut(s) 31, 72, 163, 197, 534, 988
AluI AGCT 6 cut(s) 31, 72, 163, 197, 534, 988
Alw21I GWGCWC 1 cut(s) 335
Alw26I GTCTC 2 cut(s) 172, 1050
AlwI GGATC 1 cut(s) 371
Ama87I CYCGRG 1 cut(s) 529
AoxI GGCC 3 cut(s) 139, 338, 612
ApeKI GCWGC 1 cut(s) 270
ApoI RAATTY 1 cut(s) 79
AspS9I GGNCC 2 cut(s) 339, 472
AsuC2I CCSGG 1 cut(s) 520
AsuHPI GGTGA 1 cut(s) 868
AsuNHI GCTAGC 1 cut(s) 509
AvaI CYCGRG 1 cut(s) 529
AvaII GGWCC 1 cut(s) 472
BalI TGGCCA 2 cut(s) 141, 614
Bbv12I GWGCWC 1 cut(s) 335
BbvI GCAGC 1 cut(s) 282
BccI CCATC 2 cut(s) 374, 934
BceAI ACGGC 1 cut(s) 409
BciT130I CCWGG 1 cut(s) 470
BcnI CCSGG 1 cut(s) 520
BcoDI GTCTC 2 cut(s) 172, 1050
BfaI CTAG 1 cut(s) 510
BfuAI ACCTGC 1 cut(s) 992
BisI GCNGC 2 cut(s) 271, 744
BlpI GCTNAGC 1 cut(s) 984
BlsI GCNGC 2 cut(s) 272, 745
Bme1390I CCNGG 2 cut(s) 470, 520
Bme18I GGWCC 1 cut(s) 472
BmeT110I CYCGRG 1 cut(s) 529
BmgBI CACGTC 1 cut(s) 589
BmgT120I GGNCC 2 cut(s) 339, 472
BmiI GGNNCC 4 cut(s) 59, 404, 474, 607
BmrFI CCNGG 2 cut(s) 470, 520
BmsI GCATC 2 cut(s) 505, 739
BmtI GCTAGC 1 cut(s) 513
BplI GAGNNNNNCTC 2 cut(s) 152, 184
BpmI CTGGAG 1 cut(s) 802
Bpu1102I GCTNAGC 1 cut(s) 984
BpuEI CTTGAG 1 cut(s) 830
BpuMI CCSGG 1 cut(s) 520
BsaAI YACGTR 1 cut(s) 433
BsaHI GRCGYC 2 cut(s) 297, 501
BsaI GGTCTC 1 cut(s) 1050
BsaJI CCNNGG 3 cut(s) 380, 504, 609
Bsc4I CCNNNNNNNGG 3 cut(s) 54, 381, 1034
Bse1I ACTGG 1 cut(s) 785
Bse3DI GCAATG 1 cut(s) 621
BseBI CCWGG 1 cut(s) 470
BseDI CCNNGG 3 cut(s) 380, 504, 609
BseGI GGATG 4 cut(s) 126, 204, 450, 754
BseLI CCNNNNNNNGG 3 cut(s) 54, 381, 1034
BseMI GCAATG 1 cut(s) 621
BseMII CTCAG 1 cut(s) 251
BseNI ACTGG 1 cut(s) 785
BseRI GAGGAG 1 cut(s) 299
BseXI GCAGC 1 cut(s) 282
BsgI GTGCAG 1 cut(s) 120
BshFI GGCC 3 cut(s) 141, 340, 614
BsiHKAI GWGCWC 1 cut(s) 335
BsiHKCI CYCGRG 1 cut(s) 529
BsiSI CCGG 2 cut(s) 237, 520
BslFI GGGAC 3 cut(s) 73, 613, 734
BslI CCNNNNNNNGG 3 cut(s) 54, 381, 1034
BsmAI GTCTC 2 cut(s) 172, 1050
BsmFI GGGAC 3 cut(s) 73, 613, 734
BsmI GAATGC 1 cut(s) 800
BsnI GGCC 3 cut(s) 141, 340, 614
Bso31I GGTCTC 1 cut(s) 1050
BsoBI CYCGRG 1 cut(s) 529
Bsp1286I GDGCHC 1 cut(s) 335
Bsp143I GATC 3 cut(s) 376, 525, 661
Bsp1720I GCTNAGC 1 cut(s) 984
Bsp19I CCATGG 2 cut(s) 380, 504
BspACI CCGC 5 cut(s) 171, 303, 594, 743, 746
BspANI GGCC 3 cut(s) 141, 340, 614
BspCNI CTCAG 1 cut(s) 252
BspHI TCATGA 1 cut(s) 25
BspLI GGNNCC 4 cut(s) 59, 404, 474, 607
BspMI ACCTGC 1 cut(s) 992
BspOI GCTAGC 1 cut(s) 513
BspPI GGATC 1 cut(s) 371
BspTNI GGTCTC 1 cut(s) 1050
BsrDI GCAATG 1 cut(s) 621
BsrI ACTGG 1 cut(s) 785
BssECI CCNNGG 3 cut(s) 380, 504, 609
BssMI GATC 3 cut(s) 376, 525, 661
BssNI GRCGYC 2 cut(s) 297, 501
BssT1I CCWWGG 2 cut(s) 380, 504
Bst2UI CCWGG 1 cut(s) 470
Bst4CI ACNGT 3 cut(s) 610, 655, 877
BstACI GRCGYC 2 cut(s) 297, 501
BstBAI YACGTR 1 cut(s) 433
BstC8I GCNNGC 1 cut(s) 511
BstDEI CTNAG 3 cut(s) 226, 260, 984
BstDSI CCRYGG 3 cut(s) 380, 504, 609
BstF5I GGATG 4 cut(s) 126, 204, 450, 754
BstKTI GATC 3 cut(s) 379, 528, 664
BstMAI GTCTC 2 cut(s) 172, 1050
BstMBI GATC 3 cut(s) 376, 525, 661
BstMWI GCNNNNNNNGC 3 cut(s) 515, 740, 749
BstNI CCWGG 1 cut(s) 470
BstNSI RCATGY 1 cut(s) 727
BstSCI CCNGG 2 cut(s) 468, 518
BstV1I GCAGC 1 cut(s) 282
BstXI CCANNNNNNTGG 1 cut(s) 137
BsuRI GGCC 3 cut(s) 141, 340, 614
BtgI CCRYGG 3 cut(s) 380, 504, 609
BtgZI GCGATG 2 cut(s) 528, 829
BtrI CACGTC 1 cut(s) 589
BtsCI GGATG 4 cut(s) 126, 204, 450, 754
BtsIMutI CAGTG 1 cut(s) 651
BveI ACCTGC 1 cut(s) 992
Cac8I GCNNGC 1 cut(s) 511
CciI TCATGA 1 cut(s) 25
Cfr13I GGNCC 2 cut(s) 339, 472
CseI GACGC 3 cut(s) 305, 509, 1007
Csp6I GTAC 1 cut(s) 287
CviQI GTAC 1 cut(s) 287
DdeI CTNAG 3 cut(s) 226, 260, 984
DpnI GATC 3 cut(s) 378, 527, 663
DpnII GATC 3 cut(s) 376, 525, 661
DraIII CACNNNGTG 1 cut(s) 436
EaeI YGGCCR 2 cut(s) 139, 612
EciI GGCGGA 2 cut(s) 160, 761
Eco130I CCWWGG 2 cut(s) 380, 504
Eco31I GGTCTC 1 cut(s) 1050
Eco32I GATATC 1 cut(s) 115
Eco47I GGWCC 1 cut(s) 472
Eco88I CYCGRG 1 cut(s) 529
EcoO109I RGGNCCY 2 cut(s) 339, 472
EcoRII CCWGG 1 cut(s) 468
EcoRV GATATC 1 cut(s) 115
EcoT14I CCWWGG 2 cut(s) 380, 504
ErhI CCWWGG 2 cut(s) 380, 504
FaqI GGGAC 3 cut(s) 73, 613, 734
FauNDI CATATG 1 cut(s) 642
Fnu4HI GCNGC 2 cut(s) 271, 744
FokI GGATG 4 cut(s) 113, 191, 457, 761
Fsp4HI GCNGC 2 cut(s) 271, 744
FspBI CTAG 1 cut(s) 510
GluI GCNGC 2 cut(s) 271, 744
GsuI CTGGAG 1 cut(s) 802
HaeIII GGCC 3 cut(s) 141, 340, 614
HapII CCGG 2 cut(s) 237, 520
HgaI GACGC 3 cut(s) 305, 509, 1007
Hin1I GRCGYC 2 cut(s) 297, 501
HincII GTYRAC 1 cut(s) 586
HindII GTYRAC 1 cut(s) 586
HinfI GANTC 5 cut(s) 151, 222, 478, 575, 902
HpaII CCGG 2 cut(s) 237, 520
HphI GGTGA 1 cut(s) 868
Hpy166II GTNNAC 2 cut(s) 232, 586
Hpy188I TCNGA 3 cut(s) 160, 261, 997
Hpy188III TCNNGA 3 cut(s) 26, 313, 529
Hpy8I GTNNAC 2 cut(s) 232, 586
HpyAV CCTTC 1 cut(s) 352
HpyCH4III ACNGT 3 cut(s) 610, 655, 877
HpyCH4IV ACGT 2 cut(s) 432, 588
HpyCH4V TGCA 6 cut(s) 101, 439, 485, 651, 716, 775
HpyF10VI GCNNNNNNNGC 3 cut(s) 515, 740, 749
HpyF3I CTNAG 3 cut(s) 226, 260, 984
HpySE526I ACGT 2 cut(s) 432, 588
Hsp92I GRCGYC 2 cut(s) 297, 501
Kzo9I GATC 3 cut(s) 376, 525, 661
Lsp1109I GCAGC 1 cut(s) 282
LweI GCATC 2 cut(s) 505, 739
MaeI CTAG 1 cut(s) 510
MaeII ACGT 2 cut(s) 432, 588
MalI GATC 3 cut(s) 378, 527, 663
MboI GATC 3 cut(s) 376, 525, 661
MboII GAAGA 2 cut(s) 803, 916
MhlI GDGCHC 1 cut(s) 335
MlsI TGGCCA 2 cut(s) 141, 614
MluCI AATT 4 cut(s) 79, 107, 180, 828
MluNI TGGCCA 2 cut(s) 141, 614
MlyI GAGTC 1 cut(s) 472
MnlI CCTC 9 cut(s) 101, 224, 310, 320, 648, 678, 724, 832, 1048
Mox20I TGGCCA 2 cut(s) 141, 614
MscI TGGCCA 2 cut(s) 141, 614
MseI TTAA 3 cut(s) 371, 951, 1040
Msp20I TGGCCA 2 cut(s) 141, 614
MspI CCGG 2 cut(s) 237, 520
MspR9I CCNGG 2 cut(s) 470, 520
Mva1269I GAATGC 1 cut(s) 800
MvaI CCWGG 1 cut(s) 470
MwoI GCNNNNNNNGC 3 cut(s) 515, 740, 749
NciI CCSGG 1 cut(s) 520
NcoI CCATGG 2 cut(s) 380, 504
NdeI CATATG 1 cut(s) 642
NdeII GATC 3 cut(s) 376, 525, 661
NheI GCTAGC 1 cut(s) 509
NlaIV GGNNCC 4 cut(s) 59, 404, 474, 607
NspI RCATGY 1 cut(s) 727
PaeR7I CTCGAG 1 cut(s) 529
PagI TCATGA 1 cut(s) 25
PciI ACATGT 1 cut(s) 723
PcsI WCGNNNNNNNCGW 1 cut(s) 217
PctI GAATGC 1 cut(s) 800
PfeI GAWTC 4 cut(s) 151, 222, 575, 902
PkrI GCNGC 2 cut(s) 272, 745
PleI GAGTC 1 cut(s) 472
PpsI GAGTC 1 cut(s) 472
Ppu21I YACGTR 1 cut(s) 433
PpuMI RGGWCCY 1 cut(s) 472
PscI ACATGT 1 cut(s) 723
Psp5II RGGWCCY 1 cut(s) 472
Psp6I CCWGG 1 cut(s) 468
PspGI CCWGG 1 cut(s) 468
PspN4I GGNNCC 4 cut(s) 59, 404, 474, 607
PspPI GGNCC 2 cut(s) 339, 472
PspPPI RGGWCCY 1 cut(s) 472
RsaI GTAC 1 cut(s) 288
RsaNI GTAC 1 cut(s) 287
SaqAI TTAA 3 cut(s) 371, 951, 1040
SatI GCNGC 2 cut(s) 271, 744
Sau3AI GATC 3 cut(s) 376, 525, 661
Sau96I GGNCC 2 cut(s) 339, 472
SchI GAGTC 1 cut(s) 472
ScrFI CCNGG 2 cut(s) 470, 520
SduI GDGCHC 1 cut(s) 335
SfaNI GCATC 2 cut(s) 505, 739
Sfr274I CTCGAG 1 cut(s) 529
SinI GGWCC 1 cut(s) 472
SlaI CTCGAG 1 cut(s) 529
SmlI CTYRAG 2 cut(s) 529, 809
SmoI CTYRAG 2 cut(s) 529, 809
Sse9I AATT 4 cut(s) 79, 107, 180, 828
SsiI CCGC 5 cut(s) 171, 303, 594, 743, 746
SspMI CTAG 1 cut(s) 510
StyD4I CCNGG 2 cut(s) 468, 518
StyI CCWWGG 2 cut(s) 380, 504
TaaI ACNGT 3 cut(s) 610, 655, 877
TaiI ACGT 2 cut(s) 435, 591
TaqI TCGA 2 cut(s) 530, 927
TasI AATT 4 cut(s) 79, 107, 180, 828
TatI WGTACW 1 cut(s) 286
TauI GCSGC 1 cut(s) 746
TfiI GAWTC 4 cut(s) 151, 222, 575, 902
Tru1I TTAA 3 cut(s) 371, 951, 1040
Tru9I TTAA 3 cut(s) 371, 951, 1040
TscAI CASTG 1 cut(s) 658
TseI GCWGC 1 cut(s) 270
TspDTI ATGAA 4 cut(s) 64, 193, 659, 804
TspRI CASTG 1 cut(s) 658
VpaK11BI GGWCC 1 cut(s) 472
XapI RAATTY 1 cut(s) 79
XceI RCATGY 1 cut(s) 727
XhoI CTCGAG 1 cut(s) 529
XspI CTAG 1 cut(s) 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.