Prupe.3G119100_v2.0.a1
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000692
Physical Location & Seq
Forward (+)
10376846 .. 10378212
1367 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G119100.1

Sequence Viewer

Length: 1065 bp
ATGGGAAGTGAAGTGAGAGCAACTCATGAGCTACTCCAAGCACAAGCCCACATTTGGAACCACATTTTTAGCTTCATAAATTCTATGTCCCTCAAATGTGCAGTTCAATTAGATATCCCAGATGTCATCCAAAAACATGGCCAACCCATGACTCTTTCCGAGCTTGTCTCCGCCCTACCAATTTCCCCAACAAAAGCTCATTTCATTCCACGCCTCATGCGAATCTTAGTCCACTCCGGCTTCTTTGCCAGAGAAAGTCTGAATGGCGGCGAACAAGGTTATGTACTAACAGAGGCCTCCGCACTCCTCCTGAAAGACAATCCCATAAGCGCAAGGCCCTTCTTACTTGCCATGCTCAATCCCATCTTAACAGATCCATGGCAGTATTTGACCCCTTGGTTCCAAAATGACAATCCTACGCCATTTCACGTGGTGCATGGGATGACATTTTGGGATTATGGGAGCCAGGACCCGACGCTTTCACATTTTTTCAATGACGCCATGCCTAGCGATGCCCGGTTGATCTCAAGCTTGATGATTGATGACTGCAAAGGGGTTTTTCAAGGAGTGGAGTCGTTGGTTGACGTGGGCGGTGGGACGGGAACTGTGGCCAAGTCCATTGCTGATGCCTTCCCATATATGAAATGCACTGTACTTGATCTCCCTCATGTAGTTGCTGACCAAAAAGGGAGTAAGAACTTGGAATATGTTGCGGGGGACATGTTTGAGGCTGTTCCTGCCGGCGGTGCTATTTTTTTGAAGTGGATATTGCATGACTGGAGTGATGAAGAATGCGTGAAAATACTTGAGCGATGTAAAGAGGCAATTACAAGAGAGGGCAAGAAAGGCAAGGTGATTATCGTAGATATGACGGTGGAGAACAAGAAGACAGATAAAGAATCTGGGGAAACACAACTTTTCTTCGATATGCAGATGATGGTTATGACTACCGGAAAAGAAAGGAATGAGAAAGAATGGGCTAAGCTCTTTTCTGACGCAGGTTTCAGCCACTATAAGATTACTCCCTGTTTGGGTTTAAGGTCTCTCAATGAGGTTTATCCTTGA

Protein Analysis

355

Amino Acids

39.57

Weight (kDa)

5.54

Isoelectric Point (pI)

28.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26800 FvH4_6g26810
malus_domestica MD01G1048000.v1.1 MD01G1048300.v1.1 MD01G1048400.v1.1 MD01G1051800.v1.1 MD01G1051900.v1.1 MD01G1149300.v1.1
prunus_persica Prupe.3G118900_v2.0.a1 Prupe.3G119100_v2.0.a1 Prupe.3G119700_v2.0.a1 Prupe.3G119800_v2.0.a1 Prupe.3G120200_v2.0.a1 Prupe.3G120400_v2.0.a1 Prupe.3G127600_v2.0.a1 Prupe.3G129000_v2.0.a1 Prupe.3G129200_v2.0.a1 Prupe.3G129400_v2.0.a1 Prupe.3G129600_v2.0.a1 Prupe.3G129800_v2.0.a1 Prupe.4G252900_v2.0.a1 Prupe.4G253200_v2.0.a1 Prupe.4G253300_v2.0.a1
pyrus_communis pycom01g07360 pycom01g07640 pycom01g07670 pycom01g07720 pycom01g07740 pycom01g07750
rosa_chinensis RchiOBHm_Chr2g0119291 RchiOBHm_Chr2g0123081 RchiOBHm_Chr2g0123091 RchiOBHm_Chr2g0128091 RchiOBHm_Chr2g0128121 RchiOBHm_Chr2g0128161 RchiOBHm_Chr4g0436611
rosa_laevigata RLG00000006507 RLG00000006508 RLG00000018994 RLG00000018995
rosa_multiflora Rmu_co8289337.1_g000001 Rmu_sc0000837.1_g000001 Rmu_sc0003130.1_g000011 Rmu_sc0027975.1_g000001
rosa_roxburghii Rroxscaffold_2G00115570 Rroxscaffold_2G00115600 Rroxscaffold_2G00116080 Rroxscaffold_2G00116090 Rroxscaffold_5G00377660
rosa_rugosa Rorug02G0278000 Rorug02G0278000 Rorug02G0278100 Rorug02G0558700 Rorug04G0294700
rosa_samantha Rh2AG330000 Rh2AG330300 Rh2AG330500 Rh2AG330600 Rh2AG330900 Rh2AG331100 Rh2BG310500 Rh2BG339200 Rh2BG339300 Rh2CG316800 Rh2DG304600 Rh2DG356000 Rh2DG356200 Rh4AG349100 Rh4BG357800 Rh4CG372300 Rh4DG352000 Rh5BG070000
rosa_wichuraiana Rw2G026730 Rw2G026760 Rw4G030540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 989
AciI CCGC 6 cut(s) 171, 267, 300, 591, 713, 744
AclWI GGATC 1 cut(s) 368
AcoI YGGCCR 2 cut(s) 139, 609
AcsI RAATTY 1 cut(s) 79
AcvI CACGTG 1 cut(s) 430
AcyI GRCGYC 1 cut(s) 498
AdeI CACNNNGTG 1 cut(s) 433
AfaI GTAC 2 cut(s) 285, 654
AfiI CCNNNNNNNGG 3 cut(s) 54, 743, 1031
AflIII ACRYGT 1 cut(s) 720
AgsI TTSAA 4 cut(s) 107, 493, 563, 760
AjiI CACGTC 1 cut(s) 586
AjnI CCWGG 1 cut(s) 465
AluBI AGCT 6 cut(s) 31, 72, 163, 197, 531, 985
AluI AGCT 6 cut(s) 31, 72, 163, 197, 531, 985
Alw26I GTCTC 2 cut(s) 172, 1047
AlwI GGATC 1 cut(s) 368
AoxI GGCC 4 cut(s) 139, 294, 335, 609
ApoI RAATTY 1 cut(s) 79
AspLEI GCGC 1 cut(s) 332
AspS9I GGNCC 2 cut(s) 336, 469
AsuC2I CCSGG 1 cut(s) 517
AsuHPI GGTGA 1 cut(s) 865
AvaII GGWCC 1 cut(s) 469
BalI TGGCCA 2 cut(s) 141, 611
BbrPI CACGTG 1 cut(s) 430
BbsI GAAGAC 1 cut(s) 893
BccI CCATC 2 cut(s) 371, 931
BciT130I CCWGG 1 cut(s) 467
BcnI CCSGG 1 cut(s) 517
BcoDI GTCTC 2 cut(s) 172, 1047
BfaI CTAG 1 cut(s) 507
BfuAI ACCTGC 1 cut(s) 989
BisI GCNGC 1 cut(s) 268
BlpI GCTNAGC 1 cut(s) 981
BlsI GCNGC 1 cut(s) 269
Bme1390I CCNGG 2 cut(s) 467, 517
Bme18I GGWCC 1 cut(s) 469
BmgBI CACGTC 1 cut(s) 586
BmgT120I GGNCC 2 cut(s) 336, 469
BmiI GGNNCC 4 cut(s) 59, 401, 464, 471
BmrFI CCNGG 2 cut(s) 467, 517
BmsI GCATC 2 cut(s) 502, 616
BpiI GAAGAC 1 cut(s) 893
BplI GAGNNNNNCTC 4 cut(s) 7, 39, 152, 184
BpmI CTGGAG 1 cut(s) 799
Bpu1102I GCTNAGC 1 cut(s) 981
BpuEI CTTGAG 2 cut(s) 511, 827
BpuMI CCSGG 1 cut(s) 517
BsaAI YACGTR 1 cut(s) 430
BsaHI GRCGYC 1 cut(s) 498
BsaI GGTCTC 1 cut(s) 1047
BsaJI CCNNGG 2 cut(s) 377, 395
BsaWI WCCGGW 1 cut(s) 950
BsaXI ACNNNNNCTCC 2 cut(s) 645, 675
Bsc4I CCNNNNNNNGG 3 cut(s) 54, 743, 1031
Bse118I RCCGGY 1 cut(s) 740
Bse1I ACTGG 1 cut(s) 782
Bse3DI GCAATG 1 cut(s) 618
BseBI CCWGG 1 cut(s) 467
BseDI CCNNGG 2 cut(s) 377, 395
BseGI GGATG 2 cut(s) 126, 447
BseLI CCNNNNNNNGG 3 cut(s) 54, 743, 1031
BseMI GCAATG 1 cut(s) 618
BseNI ACTGG 1 cut(s) 782
BseRI GAGGAG 1 cut(s) 296
BsgI GTGCAG 1 cut(s) 120
BshFI GGCC 4 cut(s) 141, 296, 337, 611
BsiSI CCGG 4 cut(s) 237, 517, 741, 951
BslFI GGGAC 3 cut(s) 73, 610, 731
BslI CCNNNNNNNGG 3 cut(s) 54, 743, 1031
BsmAI GTCTC 2 cut(s) 172, 1047
BsmFI GGGAC 3 cut(s) 73, 610, 731
BsmI GAATGC 1 cut(s) 797
BsnI GGCC 4 cut(s) 141, 296, 337, 611
Bso31I GGTCTC 1 cut(s) 1047
Bsp143I GATC 3 cut(s) 373, 522, 658
Bsp1720I GCTNAGC 1 cut(s) 981
Bsp19I CCATGG 1 cut(s) 377
BspACI CCGC 6 cut(s) 171, 267, 300, 591, 713, 744
BspANI GGCC 4 cut(s) 141, 296, 337, 611
BspHI TCATGA 1 cut(s) 25
BspLI GGNNCC 4 cut(s) 59, 401, 464, 471
BspMI ACCTGC 1 cut(s) 989
BspPI GGATC 1 cut(s) 368
BspTNI GGTCTC 1 cut(s) 1047
BsrDI GCAATG 1 cut(s) 618
BsrFI RCCGGY 1 cut(s) 740
BsrI ACTGG 1 cut(s) 782
BssAI RCCGGY 1 cut(s) 740
BssECI CCNNGG 2 cut(s) 377, 395
BssMI GATC 3 cut(s) 373, 522, 658
BssNI GRCGYC 1 cut(s) 498
BssT1I CCWWGG 2 cut(s) 377, 395
Bst2UI CCWGG 1 cut(s) 467
Bst4CI ACNGT 3 cut(s) 607, 652, 874
BstACI GRCGYC 1 cut(s) 498
BstBAI YACGTR 1 cut(s) 430
BstC8I GCNNGC 1 cut(s) 742
BstDEI CTNAG 2 cut(s) 226, 981
BstDSI CCRYGG 1 cut(s) 377
BstF5I GGATG 2 cut(s) 126, 447
BstHHI GCGC 1 cut(s) 332
BstKTI GATC 3 cut(s) 376, 525, 661
BstMAI GTCTC 2 cut(s) 172, 1047
BstMBI GATC 3 cut(s) 373, 522, 658
BstMWI GCNNNNNNNGC 3 cut(s) 737, 746, 846
BstNI CCWGG 1 cut(s) 467
BstNSI RCATGY 1 cut(s) 724
BstSCI CCNGG 2 cut(s) 465, 515
BstV2I GAAGAC 1 cut(s) 893
BstX2I RGATCY 1 cut(s) 373
BstXI CCANNNNNNTGG 1 cut(s) 137
BstYI RGATCY 1 cut(s) 373
BsuRI GGCC 4 cut(s) 141, 296, 337, 611
BtgI CCRYGG 1 cut(s) 377
BtgZI GCGATG 2 cut(s) 525, 826
BtrI CACGTC 1 cut(s) 586
BtsCI GGATG 2 cut(s) 126, 447
BtsIMutI CAGTG 1 cut(s) 648
BveI ACCTGC 1 cut(s) 989
Cac8I GCNNGC 1 cut(s) 742
CciI TCATGA 1 cut(s) 25
CfoI GCGC 1 cut(s) 332
Cfr10I RCCGGY 1 cut(s) 740
Cfr13I GGNCC 2 cut(s) 336, 469
CseI GACGC 3 cut(s) 484, 506, 1004
Csp6I GTAC 2 cut(s) 284, 653
CviQI GTAC 2 cut(s) 284, 653
DdeI CTNAG 2 cut(s) 226, 981
DpnI GATC 3 cut(s) 375, 524, 660
DpnII GATC 3 cut(s) 373, 522, 658
DraIII CACNNNGTG 1 cut(s) 433
EaeI YGGCCR 2 cut(s) 139, 609
EciI GGCGGA 1 cut(s) 160
Eco130I CCWWGG 2 cut(s) 377, 395
Eco147I AGGCCT 1 cut(s) 296
Eco31I GGTCTC 1 cut(s) 1047
Eco32I GATATC 1 cut(s) 115
Eco47I GGWCC 1 cut(s) 469
Eco72I CACGTG 1 cut(s) 430
EcoO109I RGGNCCY 2 cut(s) 336, 469
EcoRII CCWGG 1 cut(s) 465
EcoRV GATATC 1 cut(s) 115
EcoT14I CCWWGG 2 cut(s) 377, 395
ErhI CCWWGG 2 cut(s) 377, 395
FaqI GGGAC 3 cut(s) 73, 610, 731
FauI CCCGC 1 cut(s) 706
Fnu4HI GCNGC 1 cut(s) 268
FokI GGATG 2 cut(s) 113, 454
Fsp4HI GCNGC 1 cut(s) 268
FspBI CTAG 1 cut(s) 507
GlaI GCGC 1 cut(s) 331
GluI GCNGC 1 cut(s) 268
GsuI CTGGAG 1 cut(s) 799
HaeIII GGCC 4 cut(s) 141, 296, 337, 611
HapII CCGG 4 cut(s) 237, 517, 741, 951
HgaI GACGC 3 cut(s) 484, 506, 1004
HhaI GCGC 1 cut(s) 332
Hin1I GRCGYC 1 cut(s) 498
Hin6I GCGC 1 cut(s) 330
HinP1I GCGC 1 cut(s) 330
HincII GTYRAC 1 cut(s) 583
HindII GTYRAC 1 cut(s) 583
HindIII AAGCTT 1 cut(s) 529
HinfI GANTC 4 cut(s) 151, 222, 572, 899
HpaII CCGG 4 cut(s) 237, 517, 741, 951
HphI GGTGA 1 cut(s) 865
Hpy166II GTNNAC 2 cut(s) 232, 583
Hpy188I TCNGA 3 cut(s) 160, 261, 994
Hpy188III TCNNGA 2 cut(s) 26, 310
Hpy8I GTNNAC 2 cut(s) 232, 583
Hpy99I CGWCG 1 cut(s) 478
HpyAV CCTTC 2 cut(s) 349, 640
HpyCH4III ACNGT 3 cut(s) 607, 652, 874
HpyCH4IV ACGT 2 cut(s) 429, 585
HpyCH4V TGCA 6 cut(s) 101, 436, 549, 648, 772, 931
HpyF10VI GCNNNNNNNGC 3 cut(s) 737, 746, 846
HpyF3I CTNAG 2 cut(s) 226, 981
HpySE526I ACGT 2 cut(s) 429, 585
Hsp92I GRCGYC 1 cut(s) 498
HspAI GCGC 1 cut(s) 330
KroI GCCGGC 1 cut(s) 740
KroNI GCCGGC 1 cut(s) 742
Kzo9I GATC 3 cut(s) 373, 522, 658
LmnI GCTCC 1 cut(s) 462
LweI GCATC 2 cut(s) 502, 616
MaeI CTAG 1 cut(s) 507
MaeII ACGT 2 cut(s) 429, 585
MalI GATC 3 cut(s) 375, 524, 660
MboI GATC 3 cut(s) 373, 522, 658
MboII GAAGA 3 cut(s) 800, 898, 913
MflI RGATCY 1 cut(s) 373
MlsI TGGCCA 2 cut(s) 141, 611
MluCI AATT 4 cut(s) 79, 107, 180, 825
MluNI TGGCCA 2 cut(s) 141, 611
MlyI GAGTC 2 cut(s) 145, 581
Mox20I TGGCCA 2 cut(s) 141, 611
MroNI GCCGGC 1 cut(s) 740
MscI TGGCCA 2 cut(s) 141, 611
MseI TTAA 2 cut(s) 368, 1037
Msp20I TGGCCA 2 cut(s) 141, 611
MspI CCGG 4 cut(s) 237, 517, 741, 951
MspR9I CCNGG 2 cut(s) 467, 517
Mva1269I GAATGC 1 cut(s) 797
MvaI CCWGG 1 cut(s) 467
MwoI GCNNNNNNNGC 3 cut(s) 737, 746, 846
NaeI GCCGGC 1 cut(s) 742
NciI CCSGG 1 cut(s) 517
NcoI CCATGG 1 cut(s) 377
NdeII GATC 3 cut(s) 373, 522, 658
NgoMIV GCCGGC 1 cut(s) 740
NlaIV GGNNCC 4 cut(s) 59, 401, 464, 471
NspI RCATGY 1 cut(s) 724
PagI TCATGA 1 cut(s) 25
PceI AGGCCT 1 cut(s) 296
PciI ACATGT 1 cut(s) 720
PcsI WCGNNNNNNNCGW 1 cut(s) 217
PctI GAATGC 1 cut(s) 797
PdiI GCCGGC 1 cut(s) 742
PfeI GAWTC 2 cut(s) 222, 899
PkrI GCNGC 1 cut(s) 269
PleI GAGTC 2 cut(s) 145, 580
PmaCI CACGTG 1 cut(s) 430
PmlI CACGTG 1 cut(s) 430
PpsI GAGTC 2 cut(s) 145, 580
Ppu21I YACGTR 1 cut(s) 430
PpuMI RGGWCCY 1 cut(s) 469
PscI ACATGT 1 cut(s) 720
Psp5II RGGWCCY 1 cut(s) 469
Psp6I CCWGG 1 cut(s) 465
PspCI CACGTG 1 cut(s) 430
PspGI CCWGG 1 cut(s) 465
PspN4I GGNNCC 4 cut(s) 59, 401, 464, 471
PspPI GGNCC 2 cut(s) 336, 469
PspPPI RGGWCCY 1 cut(s) 469
PsuI RGATCY 1 cut(s) 373
RsaI GTAC 2 cut(s) 285, 654
RsaNI GTAC 2 cut(s) 284, 653
SaqAI TTAA 2 cut(s) 368, 1037
SatI GCNGC 1 cut(s) 268
Sau3AI GATC 3 cut(s) 373, 522, 658
Sau96I GGNCC 2 cut(s) 336, 469
SchI GAGTC 2 cut(s) 145, 581
ScrFI CCNGG 2 cut(s) 467, 517
SfaNI GCATC 2 cut(s) 502, 616
SinI GGWCC 1 cut(s) 469
SmlI CTYRAG 2 cut(s) 526, 806
SmoI CTYRAG 2 cut(s) 526, 806
Sse9I AATT 4 cut(s) 79, 107, 180, 825
SseBI AGGCCT 1 cut(s) 296
SsiI CCGC 6 cut(s) 171, 267, 300, 591, 713, 744
SspMI CTAG 1 cut(s) 507
StuI AGGCCT 1 cut(s) 296
StyD4I CCNGG 2 cut(s) 465, 515
StyI CCWWGG 2 cut(s) 377, 395
TaaI ACNGT 3 cut(s) 607, 652, 874
TaiI ACGT 2 cut(s) 432, 588
TaqI TCGA 1 cut(s) 924
TasI AATT 4 cut(s) 79, 107, 180, 825
TatI WGTACW 2 cut(s) 283, 652
TauI GCSGC 1 cut(s) 270
TfiI GAWTC 2 cut(s) 222, 899
Tru1I TTAA 2 cut(s) 368, 1037
Tru9I TTAA 2 cut(s) 368, 1037
TscAI CASTG 1 cut(s) 655
TspDTI ATGAA 4 cut(s) 64, 193, 656, 801
TspRI CASTG 1 cut(s) 655
VpaK11BI GGWCC 1 cut(s) 469
XapI RAATTY 1 cut(s) 79
XceI RCATGY 1 cut(s) 724
XspI CTAG 1 cut(s) 507
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.