Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000937

Physical Location & Seq

Genomic Coordinates Forward (+)

27560646 .. 27569462

Gene Structure 8817 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G268300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2712 bp

ATGTCGACGGTTAGAATAGAGCCCCTTCTCCACTACTATCGCAGAGAAAAACCCAGCTACCGTTCTCCATCGAAGTCATTCAAGCTCAGCTTTTTGAATGCTTTGCCTAAGAAGCTGGTCTACAATGGCCGGAGCTTCTGCAACTTCCAGCCTCCCACTCCCAGGGCTCTCACTCTCAGAGCTGCCTCTACCGACGCAGCTACAGTCGAGACCTTTGAATCCACCGACCTCTTCTTCAAGGAGACCTTTCCTCTCAAGCGGACTGAAGTGGTAGAGGGGAAGATCTTTGTCAGATTAGATCATGGGAAGAATGCCAAGAATTGGATGCTGACCGTTGGTTGTAGTCTTCCTGGAAAATGGGTTCTTCACTGGGGAGTTTCTTATGTTGACGACGTTGGCAGTGAATGGGATCAACCTCCTAGTGAAATGAGGCCACCTGGTTCAATTCCCATCAAGGACTATGCAATAGATACACCCTTGAATAAATCAGCGTTGCCCGTAGGAGGTGATCAATCTCATGAAGTGAAGATTGATGTTAAACCCAACAGTGCAATTGCAGCGATAAATTTTGTTCTCAAGGATGAAGAAACTGGTGCTTGGTATCAGCATAGAGGGAGAGATTTTAGAGTGCCTCTTGTGGACTACCTGCAAGAGGATGACAATGTGGTTGGAGCAAAATGGGGCTTGGGCGCATGGCCAGGAGCTTTGGGAAAGCTATCAAATGTGTTTGTCAAAGCTGAATCATCGCACTCCAAAGATCAAGATAGCAGCAATGAATCCAGAGATCCTCAACAGAAAACTAGGCGTGTAGAAGAGTTCTATGAAGAACTGCCTATTGCAAAAGAAATTTCTGTGAATAATTCAGCAACTGTTTCTGTAAGGAAGTGCCCTGAGACAGCTAAGAATCTTCTATGCTTAGAAACAGATTTGCCTGATCATGTTGTTGTTCACTGGGGAGTTTGTAGAGATGATTCTAAAAGATGGGAAATTCCAGCTGCCCCACATCCACCAGAAACAGTAGTATTCAAGGACAAGGCTTTGCGGACTCGATTACAGCAAAAAGAGGGTGGAAAAGGATGTTGGGCATTGTTTACTTTGGAAGAAGGACTCGCAGGATTTCTTTTTGTTTTCAAACTAAATGAAAGTACGTGGTTGAAATGTGCGGGCAATGACTTCTACATCCCTCTGTCCAGCTCAAATCACTCAATTGCTCTACCAAGAGAGGTTCCATCTGAAGATGCAAAGGTACCTGACAGTAGTACAGAAGCAGTTCAAGAAAAAAAATTTACTGCATATACCAATGGAATAATAAATGAAATAAGGAACTTGGTGAGTGACATTTCCTCTGAGAAGAATCAAAAGACAAAGTCCAAAGAAGCACAAGAAAGCATTCTTCAAGAAATAGAAAAATTGGCTTCCGAAGCCTATAGTATCTTCCGAAGCACTGTTCCAACTTTCACAGAGGAAGCAATTTCAGAGACTGAAGAATTGAAAGCCCCCGCCAAAATATGCTCAGGGACAGGCACAGGTTTTGAAATATTGTGCCAAGGTTTTAACTGGGAATCTCATAAAACTGGAAGATGGTACATGGAACTCCAAAGTAAAGCTGCAGAATTATCTTCACTAGGTTTCACTGTGATTTGGTTACCACCCCCTACAGACTCTGTGTCACCTGAAGGGTACATGCCGAAGGATTTATATAATCTGAACTCCAGATATGGAAATATTGACGAACTAAAGGAGACTGTGAGGACATTCCATAAAGTCGGTATAAAAGTTCTTGGAGATGCTGTGCTGAACCACCGTTGTGCAGAATATCAGAATCAAAATGGTATTTGGAATATCTTTGGTGGTCGTTTAAATTGGGATGATCGTGCAGTTGTTGCCGACGATCCACATTTTCAGGGCAGGGGCAATAAAAGTAGTGGGGAGTGTTTTCATGCTGCTCCAAACATTGATCATTCACAAGATTTTGTGAGGAAGGATATCAAAGAATGGTTACAATGGCTAAGGGAAGAAATTGGGTATGACGGATGGAGGCTTGATTTTGTTAGAGGATTTTGGGGTGGTTATGTCAAGGACTACATAGATTCTACTGAGCCCTACTTTGCTGTAGGCGAGTATTGGGATTCCCTATGTTATACATACGGTGAAATGGATCACAATCAAGATGCACACAGACAGAGAATTGTTGATTGGATCAATGCTACTAATGGAACTGCTGGTGCATTTGATGTCACAACAAAAGGGATTCTCCATGCAGCACTGGAAAAATGCGAGTATTGGCGATTATCAGATCAGAAGGGAAAGCCTCCAGGGGTTCTTGGATGGTGGCCATCTCGTGCTGTCACTTTCATAGAGAATCACGATACTGGTTCTACTCAGGGTCATTGGAGGTTTCCACATGATAAAGAAATGCAAGGATATGCTTACATTCTGACTCATCCAGGAACACCAACAGTTTTCTATGACCACATTTTCTCTCACTACCATTCTGAAATTAAAGCTCTACTCTCTCTGAGAAACCGGAACAAGCTCAACTGTCGGAGTAGAGTTAAAATTACCCAGGCAGAAAGAGACGTGTATGCGGCCATCATTGATGAAAAGGTTGCTGTAAAAATCGGACCAGGTCACTACGAACCCCCAAGTGGACCTCAAAGATGGTCTAAAAGTGCGGAGGGCAGAGACTACAAGGTCTGGGAAGCATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0004556 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0005983 GO:0005984 GO:0005985 GO:0005987 GO:0006073 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009251 GO:0009311 GO:0009313 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016052 GO:0016160 GO:0016787 GO:0016798 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044042 GO:0044237 GO:0044238 GO:0044247 GO:0044248 GO:0044260 GO:0044262 GO:0044264 GO:0044275 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046352 GO:0071704 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Alpha-amyl_C2 Alpha-amylase

Protein Analysis

904

Amino Acids

102.37

Weight (kDa)

6.12

Isoelectric Point (pI)

44.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000937)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G69830
fragaria_vesca	FvH4_4g31910 FvH4_4g31910
malus_domestica	MD13G1078600.v1.1 MD16G1078200.v1.1
prunus_persica	Prupe.1G268300_v2.0.a1 Prupe.1G268300_v2.0.a1
pyrus_communis	pycom13g06820 pycom16g06770
rosa_chinensis	RchiOBHm_Chr1g0315221 RchiOBHm_Chr1g0339091 RchiOBHm_Chr4g0440561 RchiOBHm_Chr5g0021421 RchiOBHm_Chr6g0272311
rosa_laevigata	RLG00000006168 RLG00000015039 RLG00000019642 RLG00000030692
rosa_multiflora	Rmu_co8071990.1_g000001 Rmu_sc0000829.1_g000011 Rmu_sc0002387.1_g000011 Rmu_sc0011312.1_g000002
rosa_roxburghii	Rroxscaffold_4G00298760 Rroxscaffold_5G00381380 Rroxscaffold_6G00426500 Rroxscaffold_7G00169140 Rroxscaffold_7G00214180
rosa_rugosa	Rorug01G0004200 Rorug04G0326700 Rorug05G0356300 Rorug05G0477400 Rorug05G0527600 Rorug07G0284000
rosa_samantha	Rh1AG270700 Rh1AG270800 Rh1AG346400 Rh1BG260100 Rh1CG254500 Rh2AG416800 Rh2CG403000 Rh3DG074600 Rh3DG292400 Rh4AG190200 Rh4AG246600 Rh4AG378400 Rh4BG035500 Rh4BG391100 Rh4CG405800 Rh4DG085900 Rh4DG385000 Rh5AG156300 Rh5AG268600 Rh5AG480700 Rh5BG155700 Rh5CG169500 Rh6AG024000 Rh6BG089200 Rh6DG025600 Rh7CG251800
rosa_wichuraiana	Rw1G024120 Rw1G030800 Rw4G032400 Rw4G032500 Rw7G034860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2693
Acc36I	ACCTGC	1 cut(s)	654
Acc65I	GGTACC	1 cut(s)	1246
AccB1I	GGYRCC	1 cut(s)	1246
AccB7I	CCANNNNNTGG	1 cut(s)	321
AccI	GTMKAC	2 cut(s)	5, 120
AciI	CCGC	6 cut(s)	259, 1042, 1163, 1500, 2588, 2675
AclWI	GGATC	5 cut(s)	417, 779, 1886, 2166, 2207
AcoI	YGGCCR	4 cut(s)	127, 695, 2333, 2589
AcsI	RAATTY	4 cut(s)	565, 846, 987, 1283
AcuI	CTGAAG	4 cut(s)	285, 1254, 1503, 1695
AfaI	GTAC	5 cut(s)	1147, 1248, 1261, 1586, 1682
AfiI	CCNNNNNNNGG	5 cut(s)	162, 321, 503, 652, 2648
AflIII	ACRYGT	1 cut(s)	2580
AhdI	GACNNNNNGTC	1 cut(s)	1666
AjiI	CACGTC	1 cut(s)	2581
AjnI	CCWGG	8 cut(s)	161, 349, 436, 697, 2314, 2446, 2565, 2626
AjuI	GAANNNNNNNTTGG	4 cut(s)	1063, 1095, 2179, 2211
AleI	CACNNNNGTG	1 cut(s)	1806
AloI	GAACNNNNNNTCC	2 cut(s)	345, 377
Alw26I	GTCTC	7 cut(s)	203, 236, 887, 1472, 1736, 2571, 2679
AlwI	GGATC	5 cut(s)	417, 779, 1886, 2166, 2207
AlwNI	CAGNNNCTG	3 cut(s)	869, 1481, 1664
AoxI	GGCC	5 cut(s)	127, 431, 695, 2333, 2589
ApeKI	GCWGC	8 cut(s)	182, 197, 557, 768, 995, 1607, 1943, 2261
ApoI	RAATTY	4 cut(s)	565, 846, 987, 1283
Asp700I	GAANNNNTTC	3 cut(s)	77, 1269, 1389
Asp718I	GGTACC	1 cut(s)	1246
AspLEI	GCGC	1 cut(s)	692
AspS9I	GGNCC	2 cut(s)	2624, 2651
AsuHPI	GGTGA	4 cut(s)	518, 1342, 1662, 2162
AvaII	GGWCC	2 cut(s)	2624, 2651
BaeGI	GKGCMC	1 cut(s)	890
BalI	TGGCCA	2 cut(s)	697, 2335
BanI	GGYRCC	1 cut(s)	1246
BanII	GRGCYC	3 cut(s)	24, 169, 2103
BarI	GAAGNNNNNNTAC	2 cut(s)	104, 136
BauI	CACGAG	1 cut(s)	2340
BbsI	GAAGAC	1 cut(s)	338
BbvI	GCAGC	8 cut(s)	169, 209, 569, 780, 982, 1594, 1930, 2273
BciT130I	CCWGG	8 cut(s)	163, 351, 438, 699, 2316, 2448, 2567, 2628
BclI	TGATCA	3 cut(s)	508, 934, 1957
BcoDI	GTCTC	7 cut(s)	203, 236, 887, 1472, 1736, 2571, 2679
BfaI	CTAG	3 cut(s)	420, 801, 1625
BfmI	CTRYAG	5 cut(s)	201, 1426, 1608, 1656, 2112
BfuAI	ACCTGC	1 cut(s)	654
BglII	AGATCT	1 cut(s)	282
BisI	GCNGC	9 cut(s)	183, 198, 558, 769, 996, 1608, 1944, 2262, 2589
BlpI	GCTNAGC	1 cut(s)	86
BlsI	GCNGC	9 cut(s)	184, 199, 559, 770, 997, 1609, 1945, 2263, 2590
Bme1390I	CCNGG	8 cut(s)	163, 351, 438, 699, 2316, 2448, 2567, 2628
Bme18I	GGWCC	2 cut(s)	2624, 2651
BmeRI	GACNNNNNGTC	1 cut(s)	1666
BmgBI	CACGTC	1 cut(s)	2581
BmgT120I	GGNCC	2 cut(s)	2624, 2651
BmiI	GGNNCC	2 cut(s)	1227, 1248
BmrFI	CCNGG	8 cut(s)	163, 351, 438, 699, 2316, 2448, 2567, 2628
BmrI	ACTGGG	3 cut(s)	379, 961, 1567
BmsI	GCATC	4 cut(s)	315, 1228, 1777, 2161
BmuI	ACTGGG	3 cut(s)	379, 961, 1567
BpiI	GAAGAC	1 cut(s)	338
BpmI	CTGGAG	2 cut(s)	1696, 2298
Bpu10I	CCTNAGC	2 cut(s)	1513, 2009
Bpu1102I	GCTNAGC	1 cut(s)	86
BpuEI	CTTGAG	2 cut(s)	239, 560
BsaAI	YACGTR	1 cut(s)	1149
BsaBI	GATNNNNATC	1 cut(s)	2163
BsaI	GGTCTC	2 cut(s)	203, 236
BsaJI	CCNNGG	5 cut(s)	161, 162, 1546, 2315, 2565
BsaWI	WCCGGW	1 cut(s)	2526
BsaXI	ACNNNNNCTCC	2 cut(s)	1776, 1806
Bsc4I	CCNNNNNNNGG	5 cut(s)	162, 321, 503, 652, 2648
Bse1I	ACTGG	7 cut(s)	374, 595, 956, 1562, 1579, 2271, 2377
Bse3DI	GCAATG	2 cut(s)	778, 1174
Bse8I	GATNNNNATC	1 cut(s)	2163
BseBI	CCWGG	8 cut(s)	163, 351, 438, 699, 2316, 2448, 2567, 2628
BseDI	CCNNGG	5 cut(s)	161, 162, 1546, 2315, 2565
BseJI	GATNNNNATC	1 cut(s)	2163
BseLI	CCNNNNNNNGG	5 cut(s)	162, 321, 503, 652, 2648
BseMI	GCAATG	2 cut(s)	778, 1174
BseMII	CTCAG	8 cut(s)	100, 190, 882, 1338, 1527, 2088, 2396, 2510
BseNI	ACTGG	7 cut(s)	374, 595, 956, 1562, 1579, 2271, 2377
BseSI	GKGCMC	1 cut(s)	890
BseXI	GCAGC	8 cut(s)	169, 209, 569, 780, 982, 1594, 1930, 2273
BseYI	CCCAGC	1 cut(s)	53
BsgI	GTGCAG	2 cut(s)	1830, 1896
BshFI	GGCC	5 cut(s)	129, 433, 697, 2335, 2591
BshNI	GGYRCC	1 cut(s)	1246
BsiSI	CCGG	2 cut(s)	130, 2527
BslFI	GGGAC	1 cut(s)	1531
BslI	CCNNNNNNNGG	5 cut(s)	162, 321, 503, 652, 2648
BsmAI	GTCTC	7 cut(s)	203, 236, 887, 1472, 1736, 2571, 2679
BsmBI	CGTCTC	1 cut(s)	2571
BsmFI	GGGAC	1 cut(s)	1531
BsmI	GAATGC	3 cut(s)	103, 316, 1389
BsnI	GGCC	5 cut(s)	129, 433, 697, 2335, 2591
Bso31I	GGTCTC	2 cut(s)	203, 236
Bsp1286I	GDGCHC	4 cut(s)	24, 169, 890, 2103
Bsp1720I	GCTNAGC	1 cut(s)	86
BspACI	CCGC	6 cut(s)	259, 1042, 1163, 1500, 2588, 2675
BspANI	GGCC	5 cut(s)	129, 433, 697, 2335, 2591
BspCNI	CTCAG	8 cut(s)	99, 189, 883, 1339, 1526, 2089, 2395, 2511
BspHI	TCATGA	1 cut(s)	517
BspLI	GGNNCC	2 cut(s)	1227, 1248
BspMAI	CTGCAG	1 cut(s)	1612
BspMI	ACCTGC	1 cut(s)	654
BspPI	GGATC	5 cut(s)	417, 779, 1886, 2166, 2207
BspT107I	GGYRCC	1 cut(s)	1246
BspTNI	GGTCTC	2 cut(s)	203, 236
BsrDI	GCAATG	2 cut(s)	778, 1174
BsrI	ACTGG	7 cut(s)	374, 595, 956, 1562, 1579, 2271, 2377
BssECI	CCNNGG	5 cut(s)	161, 162, 1546, 2315, 2565
BssSI	CACGAG	1 cut(s)	2340
BssT1I	CCWWGG	1 cut(s)	1546
Bst2BI	CACGAG	1 cut(s)	2340
Bst2UI	CCWGG	8 cut(s)	163, 351, 438, 699, 2316, 2448, 2567, 2628
Bst6I	CTCTTC	2 cut(s)	236, 807
BstAPI	GCANNNNNTGC	1 cut(s)	1883
BstBAI	YACGTR	1 cut(s)	1149
BstC8I	GCNNGC	1 cut(s)	1165
BstEII	GGTNACC	1 cut(s)	1644
BstENI	CCTNNNNNAGG	1 cut(s)	650
BstHHI	GCGC	1 cut(s)	692
BstMAI	GTCTC	7 cut(s)	203, 236, 887, 1472, 1736, 2571, 2679
BstMWI	GCNNNNNNNGC	4 cut(s)	112, 557, 1421, 1883
BstNI	CCWGG	8 cut(s)	163, 351, 438, 699, 2316, 2448, 2567, 2628
BstNSI	RCATGY	1 cut(s)	1687
BstPI	GGTNACC	1 cut(s)	1644
BstSCI	CCNGG	8 cut(s)	161, 349, 436, 697, 2314, 2446, 2565, 2626
BstSFI	CTRYAG	5 cut(s)	201, 1426, 1608, 1656, 2112
BstSLI	GKGCMC	1 cut(s)	890
BstV1I	GCAGC	8 cut(s)	169, 209, 569, 780, 982, 1594, 1930, 2273
BstV2I	GAAGAC	1 cut(s)	338
BstX2I	RGATCY	2 cut(s)	282, 784
BstYI	RGATCY	2 cut(s)	282, 784
BsuRI	GGCC	5 cut(s)	129, 433, 697, 2335, 2591
BtgZI	GCGATG	1 cut(s)	729
BtrI	CACGTC	1 cut(s)	2581
BtsI	GCAGTG	1 cut(s)	406
BtsIMutI	CAGTG	7 cut(s)	367, 406, 553, 949, 1443, 1632, 2264
BveI	ACCTGC	1 cut(s)	654
Cac8I	GCNNGC	1 cut(s)	1165
CaiI	CAGNNNCTG	3 cut(s)	869, 1481, 1664
CciI	TCATGA	1 cut(s)	517
CfoI	GCGC	1 cut(s)	692
Cfr13I	GGNCC	2 cut(s)	2624, 2651
CseI	GACGC	1 cut(s)	203
CsiI	ACCWGGT	2 cut(s)	436, 2626
Csp6I	GTAC	5 cut(s)	1146, 1247, 1260, 1585, 1681
CviAII	CATG	9 cut(s)	302, 518, 693, 938, 1588, 1684, 1940, 2258, 2405
CviQI	GTAC	5 cut(s)	1146, 1247, 1260, 1585, 1681
DraI	TTTAAA	1 cut(s)	1860
DrdI	GACNNNNNNGTC	1 cut(s)	2693
DriI	GACNNNNNGTC	1 cut(s)	1666
DseDI	GACNNNNNNGTC	1 cut(s)	2693
EaeI	YGGCCR	4 cut(s)	127, 695, 2333, 2589
Eam1104I	CTCTTC	2 cut(s)	236, 807
Eam1105I	GACNNNNNGTC	1 cut(s)	1666
EarI	CTCTTC	2 cut(s)	236, 807
Eco130I	CCWWGG	1 cut(s)	1546
Eco24I	GRGCYC	3 cut(s)	24, 169, 2103
Eco31I	GGTCTC	2 cut(s)	203, 236
Eco32I	GATATC	1 cut(s)	1987
Eco47I	GGWCC	2 cut(s)	2624, 2651
Eco57I	CTGAAG	4 cut(s)	285, 1254, 1503, 1695
Eco91I	GGTNACC	1 cut(s)	1644
EcoNI	CCTNNNNNAGG	1 cut(s)	650
EcoO65I	GGTNACC	1 cut(s)	1644
EcoRII	CCWGG	8 cut(s)	161, 349, 436, 697, 2314, 2446, 2565, 2626
EcoRV	GATATC	1 cut(s)	1987
EcoT14I	CCWWGG	1 cut(s)	1546
EcoT38I	GRGCYC	3 cut(s)	24, 169, 2103
ErhI	CCWWGG	1 cut(s)	1546
Esp3I	CGTCTC	1 cut(s)	2571
FaeI	CATG	9 cut(s)	305, 521, 696, 941, 1591, 1687, 1943, 2261, 2408
FalI	AAGNNNNNCTT	4 cut(s)	74, 106, 230, 262
FaqI	GGGAC	1 cut(s)	1531
FatI	CATG	9 cut(s)	301, 517, 692, 937, 1587, 1683, 1939, 2257, 2404
FauI	CCCGC	2 cut(s)	1156, 1507
FbaI	TGATCA	3 cut(s)	508, 934, 1957
FblI	GTMKAC	2 cut(s)	5, 120
Fnu4HI	GCNGC	9 cut(s)	183, 198, 558, 769, 996, 1608, 1944, 2262, 2589
FriOI	GRGCYC	3 cut(s)	24, 169, 2103
Fsp4HI	GCNGC	9 cut(s)	183, 198, 558, 769, 996, 1608, 1944, 2262, 2589
FspBI	CTAG	3 cut(s)	420, 801, 1625
GlaI	GCGC	1 cut(s)	691
GluI	GCNGC	9 cut(s)	183, 198, 558, 769, 996, 1608, 1944, 2262, 2589
GsaI	CCCAGC	1 cut(s)	57
GsuI	CTGGAG	2 cut(s)	1696, 2298
HaeIII	GGCC	5 cut(s)	129, 433, 697, 2335, 2591
HapII	CCGG	2 cut(s)	130, 2527
HgaI	GACGC	1 cut(s)	203
HhaI	GCGC	1 cut(s)	692
Hin1II	CATG	9 cut(s)	305, 521, 696, 941, 1591, 1687, 1943, 2261, 2408
Hin6I	GCGC	1 cut(s)	690
HinP1I	GCGC	1 cut(s)	690
HincII	GTYRAC	2 cut(s)	6, 388
HindII	GTYRAC	2 cut(s)	6, 388
HpaII	CCGG	2 cut(s)	130, 2527
HphI	GGTGA	4 cut(s)	518, 1342, 1662, 2162
Hpy166II	GTNNAC	7 cut(s)	6, 121, 388, 640, 949, 1092, 2651
Hpy188III	TCNNGA	9 cut(s)	208, 518, 761, 780, 1274, 1397, 1713, 2168, 2366
Hpy8I	GTNNAC	7 cut(s)	6, 121, 388, 640, 949, 1092, 2651
Hpy99I	CGWCG	4 cut(s)	10, 197, 395, 1892
HpyAV	CCTTC	6 cut(s)	35, 1097, 1670, 1684, 1975, 2296
HpyCH4IV	ACGT	3 cut(s)	393, 1148, 2580
HpyF10VI	GCNNNNNNNGC	4 cut(s)	112, 557, 1421, 1883
HpySE526I	ACGT	3 cut(s)	393, 1148, 2580
Hsp92II	CATG	9 cut(s)	305, 521, 696, 941, 1591, 1687, 1943, 2261, 2408
HspAI	GCGC	1 cut(s)	690
KpnI	GGTACC	1 cut(s)	1250
Ksp22I	TGATCA	3 cut(s)	508, 934, 1957
LmnI	GCTCC	4 cut(s)	132, 671, 701, 1951
Lsp1109I	GCAGC	8 cut(s)	169, 209, 569, 780, 982, 1594, 1930, 2273
LweI	GCATC	4 cut(s)	315, 1228, 1777, 2161
MabI	ACCWGGT	2 cut(s)	436, 2626
MaeI	CTAG	3 cut(s)	420, 801, 1625
MaeII	ACGT	3 cut(s)	393, 1148, 2580
MaeIII	GTNAC	7 cut(s)	1334, 1644, 1668, 1998, 2236, 2347, 2630
MfeI	CAATTG	2 cut(s)	552, 1206
MflI	RGATCY	2 cut(s)	282, 784
MhlI	GDGCHC	4 cut(s)	24, 169, 890, 2103
MlsI	TGGCCA	2 cut(s)	697, 2335
MluNI	TGGCCA	2 cut(s)	697, 2335
MlyI	GAGTC	4 cut(s)	1039, 1101, 1655, 2434
MmeI	TCCRAC	3 cut(s)	649, 1475, 2525
Mox20I	TGGCCA	2 cut(s)	697, 2335
MroXI	GAANNNNTTC	3 cut(s)	77, 1269, 1389
MscI	TGGCCA	2 cut(s)	697, 2335
MseI	TTAA	5 cut(s)	537, 1554, 1859, 2502, 2556
MslI	CAYNNNNRTG	1 cut(s)	1806
Msp20I	TGGCCA	2 cut(s)	697, 2335
MspA1I	CMGCKG	1 cut(s)	995
MspI	CCGG	2 cut(s)	130, 2527
MspR9I	CCNGG	8 cut(s)	163, 351, 438, 699, 2316, 2448, 2567, 2628
MunI	CAATTG	2 cut(s)	552, 1206
Mva1269I	GAATGC	3 cut(s)	103, 316, 1389
MvaI	CCWGG	8 cut(s)	163, 351, 438, 699, 2316, 2448, 2567, 2628
MwoI	GCNNNNNNNGC	4 cut(s)	112, 557, 1421, 1883
NlaIII	CATG	9 cut(s)	305, 521, 696, 941, 1591, 1687, 1943, 2261, 2408
NlaIV	GGNNCC	2 cut(s)	1227, 1248
NmuCI	GTSAC	5 cut(s)	1334, 1668, 2236, 2347, 2630
NspI	RCATGY	1 cut(s)	1687
OliI	CACNNNNGTG	1 cut(s)	1806
PagI	TCATGA	1 cut(s)	517
PasI	CCCWGGG	1 cut(s)	162
PctI	GAATGC	3 cut(s)	103, 316, 1389
PdmI	GAANNNNTTC	3 cut(s)	77, 1269, 1389
PflFI	GACNNNGTC	2 cut(s)	1366, 2628
PflMI	CCANNNNNTGG	1 cut(s)	321
PfoI	TCCNGGA	2 cut(s)	349, 2446
PkrI	GCNGC	9 cut(s)	184, 199, 559, 770, 997, 1609, 1945, 2263, 2590
PleI	GAGTC	4 cut(s)	1039, 1101, 1655, 2434
PpsI	GAGTC	4 cut(s)	1039, 1101, 1655, 2434
Ppu21I	YACGTR	1 cut(s)	1149
Psp6I	CCWGG	8 cut(s)	161, 349, 436, 697, 2314, 2446, 2565, 2626
PspEI	GGTNACC	1 cut(s)	1644
PspFI	CCCAGC	1 cut(s)	53
PspGI	CCWGG	8 cut(s)	161, 349, 436, 697, 2314, 2446, 2565, 2626
PspN4I	GGNNCC	2 cut(s)	1227, 1248
PspPI	GGNCC	2 cut(s)	2624, 2651
PstI	CTGCAG	1 cut(s)	1612
PstNI	CAGNNNCTG	3 cut(s)	869, 1481, 1664
PsuI	RGATCY	2 cut(s)	282, 784
PsyI	GACNNNGTC	2 cut(s)	1366, 2628
PvuII	CAGCTG	1 cut(s)	995
RsaI	GTAC	5 cut(s)	1147, 1248, 1261, 1586, 1682
RsaNI	GTAC	5 cut(s)	1146, 1247, 1260, 1585, 1681
RseI	CAYNNNNRTG	1 cut(s)	1806
SalI	GTCGAC	1 cut(s)	4
SaqAI	TTAA	5 cut(s)	537, 1554, 1859, 2502, 2556
SatI	GCNGC	9 cut(s)	183, 198, 558, 769, 996, 1608, 1944, 2262, 2589
Sau96I	GGNCC	2 cut(s)	2624, 2651
SchI	GAGTC	4 cut(s)	1039, 1101, 1655, 2434
ScrFI	CCNGG	8 cut(s)	163, 351, 438, 699, 2316, 2448, 2567, 2628
SduI	GDGCHC	4 cut(s)	24, 169, 890, 2103
SexAI	ACCWGGT	2 cut(s)	436, 2626
SfaNI	GCATC	4 cut(s)	315, 1228, 1777, 2161
SfcI	CTRYAG	5 cut(s)	201, 1426, 1608, 1656, 2112
SinI	GGWCC	2 cut(s)	2624, 2651
SmiMI	CAYNNNNRTG	1 cut(s)	1806
SmlI	CTYRAG	2 cut(s)	254, 575
SmoI	CTYRAG	2 cut(s)	254, 575
SsiI	CCGC	6 cut(s)	259, 1042, 1163, 1500, 2588, 2675
SspI	AATATT	2 cut(s)	1539, 1726
SspMI	CTAG	3 cut(s)	420, 801, 1625
StyD4I	CCNGG	8 cut(s)	161, 349, 436, 697, 2314, 2446, 2565, 2626
StyI	CCWWGG	1 cut(s)	1546
TaiI	ACGT	3 cut(s)	396, 1151, 2583
TaqI	TCGA	4 cut(s)	5, 71, 207, 1048
TatI	WGTACW	1 cut(s)	1259
TauI	GCSGC	1 cut(s)	2591
Tru1I	TTAA	5 cut(s)	537, 1554, 1859, 2502, 2556
Tru9I	TTAA	5 cut(s)	537, 1554, 1859, 2502, 2556
TscAI	CASTG	7 cut(s)	374, 406, 553, 956, 1450, 1639, 2271
TseFI	GTSAC	5 cut(s)	1334, 1668, 2236, 2347, 2630
TseI	GCWGC	8 cut(s)	182, 197, 557, 768, 995, 1607, 1943, 2261
Tsp45I	GTSAC	5 cut(s)	1334, 1668, 2236, 2347, 2630
TspDTI	ATGAA	9 cut(s)	534, 597, 789, 837, 1155, 1329, 1928, 2344, 2616
TspGWI	ACGGA	1 cut(s)	2046
TspRI	CASTG	7 cut(s)	374, 406, 553, 956, 1450, 1639, 2271
Tth111I	GACNNNGTC	2 cut(s)	1366, 2628
Van91I	CCANNNNNTGG	1 cut(s)	321
VpaK11BI	GGWCC	2 cut(s)	2624, 2651
XagI	CCTNNNNNAGG	1 cut(s)	650
XapI	RAATTY	4 cut(s)	565, 846, 987, 1283
XceI	RCATGY	1 cut(s)	1687
XmiI	GTMKAC	2 cut(s)	5, 120
XmnI	GAANNNNTTC	3 cut(s)	77, 1269, 1389
XspI	CTAG	3 cut(s)	420, 801, 1625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.