Prupe.2G094900_v2.0.a1
MYB Family

Myb/SANT-like DNA-binding domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
14949166 .. 14950101
936 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G094900.1

Sequence Viewer

Length: 336 bp
ATGCAGAAGTTTGGGCATCATATGTCAAGGTATGCATCTTGTTGTATAACTTGTATTGTTTTGGTATCCTTCAATGTATGTGCATTTTCTAATGCCAAGACTGAAGTTTCATTGGCAAGGCTTAAACGTAAGAGTGAGAAGGAAGTGTCCTCTCCATTTAGAGAGTTGAGCACCATTGGGGATTGTATGGAAATATTGGAGGCCATGGAGGGAGTGAATGATGATGCTCATGTGAAAGCTTTCGATAAGTTTACTAATTTGGATTGGAGGAAGATGTTCTTGAAGATGTTGGATCCACAGGACCACAGAGAAGAATGTGGCTCAATAGCCTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

112

Amino Acids

12.72

Weight (kDa)

6.41

Isoelectric Point (pI)

51.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 287, 300
AcuI CTGAAG 1 cut(s) 123
AgsI TTSAA 2 cut(s) 73, 283
AluBI AGCT 1 cut(s) 239
AluI AGCT 1 cut(s) 239
Alw21I GWGCWC 1 cut(s) 173
AlwI GGATC 2 cut(s) 287, 300
AoxI GGCC 1 cut(s) 201
Asp700I GAANNNNTTC 2 cut(s) 239, 275
AspS9I GGNCC 1 cut(s) 301
AvaII GGWCC 1 cut(s) 301
BamHI GGATCC 1 cut(s) 292
Bbv12I GWGCWC 1 cut(s) 173
BciVI GTATCC 1 cut(s) 76
BfuI GTATCC 1 cut(s) 76
Bme18I GGWCC 1 cut(s) 301
BmgT120I GGNCC 1 cut(s) 301
BmiI GGNNCC 1 cut(s) 294
BmsI GCATC 3 cut(s) 25, 44, 214
BsaJI CCNNGG 1 cut(s) 204
BseDI CCNNGG 1 cut(s) 204
BshFI GGCC 1 cut(s) 203
BsiHKAI GWGCWC 1 cut(s) 173
BsnI GGCC 1 cut(s) 203
Bsp1286I GDGCHC 1 cut(s) 173
Bsp143I GATC 1 cut(s) 292
Bsp19I CCATGG 1 cut(s) 204
BspANI GGCC 1 cut(s) 203
BspLI GGNNCC 1 cut(s) 294
BspPI GGATC 2 cut(s) 287, 300
BssECI CCNNGG 1 cut(s) 204
BssMI GATC 1 cut(s) 292
BssT1I CCWWGG 1 cut(s) 204
BstDSI CCRYGG 1 cut(s) 204
BstKTI GATC 1 cut(s) 295
BstMBI GATC 1 cut(s) 292
BstX2I RGATCY 1 cut(s) 292
BstYI RGATCY 1 cut(s) 292
BsuI GTATCC 1 cut(s) 76
BsuRI GGCC 1 cut(s) 203
BtgI CCRYGG 1 cut(s) 204
Cfr13I GGNCC 1 cut(s) 301
CviAII CATG 2 cut(s) 205, 230
CviJI RGCY 5 cut(s) 121, 203, 239, 321, 329
CviKI_1 RGCY 5 cut(s) 121, 203, 239, 321, 329
DpnI GATC 1 cut(s) 294
DpnII GATC 1 cut(s) 292
Eco130I CCWWGG 1 cut(s) 204
Eco47I GGWCC 1 cut(s) 301
Eco57I CTGAAG 1 cut(s) 123
EcoT14I CCWWGG 1 cut(s) 204
EcoT22I ATGCAT 1 cut(s) 37
ErhI CCWWGG 1 cut(s) 204
FaeI CATG 2 cut(s) 208, 233
FaiI YATR 8 cut(s) 21, 23, 33, 47, 79, 188, 206, 231
FalI AAGNNNNNCTT 2 cut(s) 263, 295
FatI CATG 2 cut(s) 204, 229
FauNDI CATATG 1 cut(s) 21
HaeIII GGCC 1 cut(s) 203
Hin1II CATG 2 cut(s) 208, 233
HindIII AAGCTT 1 cut(s) 237
Hpy166II GTNNAC 1 cut(s) 252
Hpy188III TCNNGA 1 cut(s) 280
Hpy8I GTNNAC 1 cut(s) 252
HpyAV CCTTC 2 cut(s) 79, 133
HpyCH4IV ACGT 1 cut(s) 127
HpyCH4V TGCA 3 cut(s) 4, 35, 83
HpySE526I ACGT 1 cut(s) 127
Hsp92II CATG 2 cut(s) 208, 233
Kzo9I GATC 1 cut(s) 292
LpnPI CCDG 1 cut(s) 284
LweI GCATC 3 cut(s) 25, 44, 214
MaeII ACGT 1 cut(s) 127
MalI GATC 1 cut(s) 294
MboI GATC 1 cut(s) 292
MboII GAAGA 3 cut(s) 283, 295, 323
MflI RGATCY 1 cut(s) 292
MhlI GDGCHC 1 cut(s) 173
MluCI AATT 1 cut(s) 256
MmeI TCCRAC 1 cut(s) 270
MnlI CCTC 4 cut(s) 160, 193, 202, 261
Mph1103I ATGCAT 1 cut(s) 37
MroXI GAANNNNTTC 2 cut(s) 239, 275
MseI TTAA 1 cut(s) 123
NcoI CCATGG 1 cut(s) 204
NdeI CATATG 1 cut(s) 21
NdeII GATC 1 cut(s) 292
NlaIII CATG 2 cut(s) 208, 233
NlaIV GGNNCC 1 cut(s) 294
NsiI ATGCAT 1 cut(s) 37
PdmI GAANNNNTTC 2 cut(s) 239, 275
PspN4I GGNNCC 1 cut(s) 294
PspPI GGNCC 1 cut(s) 301
PsuI RGATCY 1 cut(s) 292
SaqAI TTAA 1 cut(s) 123
Sau3AI GATC 1 cut(s) 292
Sau96I GGNCC 1 cut(s) 301
SduI GDGCHC 1 cut(s) 173
SetI ASST 3 cut(s) 32, 130, 241
SfaNI GCATC 3 cut(s) 25, 44, 214
SgeI CNNG 9 cut(s) 39, 51, 63, 109, 129, 217, 242, 292, 311
SinI GGWCC 1 cut(s) 301
Sse9I AATT 1 cut(s) 256
SspI AATATT 1 cut(s) 195
StyI CCWWGG 1 cut(s) 204
TaiI ACGT 1 cut(s) 130
TaqI TCGA 1 cut(s) 243
TasI AATT 1 cut(s) 256
Tru1I TTAA 1 cut(s) 123
Tru9I TTAA 1 cut(s) 123
TspDTI ATGAA 1 cut(s) 99
VpaK11BI GGWCC 1 cut(s) 301
XmnI GAANNNNTTC 2 cut(s) 239, 275
Zsp2I ATGCAT 1 cut(s) 37
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.