Rmu_sc0001706.1_g000015
ERF Family

DDE superfamily endonuclease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001706.1
OG0001153
Physical Location & Seq
Reverse (-)
59105 .. 65893
6789 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001706.1_g000015.1.cds

Sequence Viewer

Length: 2787 bp
atggagatctcgtacccgaagttggtggcagagctaggcttcggggactggacagctgtgtccatccacggcggcctcgccgttccctcactcatacaaccgcaacgtcatcaccgcggtcaagtggccgtcgatcaaggaggaaacacaagtccagcccaatcaaataccaccacagacctagcaacgccgccgctgccactacgccttcgcctggccccgatctctgtccaaatcccagccaccgaaataataagctcaaccttcaatctaaaccccagcagccaactcattggcaaagaaaacgaggccctagaaccacagatcgataacgctttaagcacggcgactctatccctccatctcatccctctaatctgcctatccccagccaccccttgctacctatcccacaatccgacacacccaatctcagcttggatcatatccgacctggatcgaaaggatcagtcctaccaccgcccaaaactcggccaccatggtcgccaattgaaagcaccatcagcagatagagcccgtccgattgcacacgccacacgccgacgagggcggaggcccatgccgatgaggatggcccctcaaaaaaaaaaggagatagcctctgccaagaataagaatgttgatgatgataatgaaaaggaaacagctgactggtccaacaaaagagaagaaatatttatagacatattgtatgaacatgtgaagaaaggggaattgcaggcatctactttcaaagcaaaaacttgggcagagataggtgatgaattatttgcacaagtaggcaaaagattttctcttgaccagctcactggtaaatttaataggctacgcattttacatcgtgaattctcagatttactagagcatacaggatttgggtgggatcctgtatccaacacagtaactgcatctccagatgtttgggataattatcttcagaaaaagccaaagatgaagaaatttcggcttaaaggcttaccccactatgaaactctaggtgaaatattcaacaccactactgcaacaggtcaaatgcattatgcatctggccaagttccacaaaactctgatgaggagcgtcaattagagcatagatttctaaacactggtgttcacgtaaagattcatgataaagttgatgatgtagatgtcattaatattgatggagaatgtgatggaggtaaaggaaaaaggaaatctacaactgatgcccctttttcatatgatcgcaagccaaagaaatgggaaaaaatggagagttatttggatgtttgtagtgaagtcatggctgaaaaattgaagcgccaaaaggacaaaaatactgaggcaactagcaatttaaaagagatgtattcaattgaagagtgtatggaagttgtggaggaaatgggagacattgagcatacagctttcataaagatgatggataaaattatgtctatggtcaatgaagataaccattctgattctgatagttcatcagatcttgaagagttggctcaacatgtattcatgtgtatgcaaatttatgagtattacatgacatatgtagacaagattccatgtcacaattcagtattatcaggacatgattatgtgcaagagttgttaaatggacatcctgatagaatatatgactcatttcgcatggacaaacatgtatttagaagattgtgctctacacttcagtctttacatttattggaacatgacagacatgtgggggttgaagaagcagtagcaattttcttatacattgtgggtcatagcgaacgcatgagaatggctgctgagcgttttcaaagatctaaagatacaattcacagggtatttaaacgtgtgttgaaagctctatgccggtatgctccaaatattatacgtcctcatagtgttggggagacacctcctgaaattttgaacaaaagaaagttttatccgtatttcgagaaatgtattggtgcaattgatggcactcatgttgctgcatgggcaccagctcaaaaacaaacatcatatcgtggaaggaaggtcctgattactcaaaacgtcatgtgtgcatgctcttttgatatgctgttcacttttgtctacactggatgggaaggaaccgctaacgatgcaagagtattcttagatgcagtgtcaagggaagaaaatcattttcctcatccagatgaagggatgcgatatcatttacgtgattataggggacctcgcaatgcaccaaaaggttccatggagttgtttaattatagacattcctcattacgtaatgtcatagagcggtgttttggcgtgttgaaaggtcggtttccaattttaaaggtcatgcctaattaccctccacgaaggcaaagactcattcccattgcttgttgtgttttacataactttattcgaaaagaagctcaacgtgataggttatttgaagcatttgatgtagaagacatgatatttgatacagaagacaggccggtaccagatatggatatgactgcaggaaacattgcaataatgaacactaccagggataggatcgcagcagctttgtgcacagcgtatggccaagctgcagttggtgttcaaggggcacagggatcctttcttggatcaggtctggtgttgtttgggttttgttaccctcgcggtggtggcagtgtggtgcgaactatggtccttgaagggacggcatggtgcaggtgtggcagcggtgtgcggcatcctcaacacagcaaggcagaagctcaaccgggctggatcagctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DDE_Tnp_4

Protein Analysis

928

Amino Acids

105.42

Weight (kDa)

7.99

Isoelectric Point (pI)

44.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2709
AasI GACNNNNNNGTC 1 cut(s) 58
Acc36I ACCTGC 1 cut(s) 2709
Acc65I GGTACC 1 cut(s) 2497
AccB1I GGYRCC 2 cut(s) 2011, 2497
AccBSI CCGCTC 1 cut(s) 2305
AccI GTMKAC 2 cut(s) 1572, 2109
AccII CGCG 2 cut(s) 117, 2667
AcoI YGGCCR 4 cut(s) 126, 493, 1069, 2584
AcsI RAATTY 5 cut(s) 836, 866, 980, 1545, 1932
AcuI CTGAAG 2 cut(s) 941, 1691
AfaI GTAC 2 cut(s) 14, 2499
AfiI CCNNNNNNNGG 6 cut(s) 22, 214, 491, 2198, 2553, 2669
AflIII ACRYGT 5 cut(s) 718, 1525, 1678, 1738, 1858
AjnI CCWGG 3 cut(s) 213, 453, 2546
Alw21I GWGCWC 2 cut(s) 1700, 2576
Alw26I GTCTC 2 cut(s) 1407, 1913
Alw44I GTGCAC 1 cut(s) 2572
AlwNI CAGNNNCTG 1 cut(s) 926
ApaLI GTGCAC 1 cut(s) 2572
ApeKI GCWGC 8 cut(s) 196, 282, 1808, 2003, 2561, 2564, 2591, 2727
ApoI RAATTY 5 cut(s) 836, 866, 980, 1545, 1932
ArsI GACNNNNNNTTYG 2 cut(s) 2459, 2491
AseI ATTAAT 1 cut(s) 1176
Asp718I GGTACC 1 cut(s) 2497
AspLEI GCGC 1 cut(s) 1326
AspS9I GGNCC 8 cut(s) 217, 310, 576, 595, 675, 2050, 2231, 2695
AsuC2I CCSGG 1 cut(s) 2772
AsuHPI GGTGA 3 cut(s) 104, 791, 1031
AsuII TTCGAA 1 cut(s) 2419
AvaII GGWCC 4 cut(s) 675, 2050, 2231, 2695
BaeGI GKGCMC 3 cut(s) 2014, 2576, 2614
BalI TGGCCA 2 cut(s) 1071, 2586
BamHI GGATCC 2 cut(s) 904, 2618
BanI GGYRCC 2 cut(s) 2011, 2497
BanII GRGCYC 1 cut(s) 538
BbsI GAAGAC 2 cut(s) 2472, 2493
Bbv12I GWGCWC 2 cut(s) 1700, 2576
BbvI GCAGC 8 cut(s) 183, 294, 1795, 1990, 2573, 2576, 2578, 2739
BccI CCATC 9 cut(s) 71, 369, 529, 586, 1178, 1190, 1438, 1982, 2112
BceAI ACGGC 5 cut(s) 65, 85, 113, 360, 2724
BciT130I CCWGG 3 cut(s) 215, 455, 2548
BciVI GTATCC 1 cut(s) 922
BcnI CCSGG 1 cut(s) 2772
BcoDI GTCTC 2 cut(s) 1407, 1913
BfaI CTAG 7 cut(s) 35, 182, 314, 881, 1016, 1353, 2785
BfmI CTRYAG 2 cut(s) 2517, 2592
BfoI RGCGCY 1 cut(s) 1327
BfuAI ACCTGC 1 cut(s) 2709
BfuI GTATCC 1 cut(s) 922
BglII AGATCT 3 cut(s) 6, 1504, 1826
BlpI GCTNAGC 1 cut(s) 1812
Bme1390I CCNGG 4 cut(s) 215, 455, 2548, 2772
Bme18I GGWCC 4 cut(s) 675, 2050, 2231, 2695
BmgT120I GGNCC 8 cut(s) 217, 310, 576, 595, 675, 2050, 2231, 2695
BmiI GGNNCC 9 cut(s) 219, 597, 906, 2013, 2128, 2232, 2254, 2499, 2620
BmrFI CCNGG 4 cut(s) 215, 455, 2548, 2772
BmsI GCATC 8 cut(s) 752, 938, 1073, 1219, 2128, 2146, 2193, 2749
BpiI GAAGAC 2 cut(s) 2472, 2493
BplI GAGNNNNNCTC 2 cut(s) 605, 637
BpmI CTGGAG 1 cut(s) 918
Bpu1102I GCTNAGC 1 cut(s) 1812
Bpu14I TTCGAA 1 cut(s) 2419
BpuMI CCSGG 1 cut(s) 2772
Bsa29I ATCGAT 1 cut(s) 327
BsaAI YACGTR 3 cut(s) 1138, 2219, 2291
BsaBI GATNNNNATC 1 cut(s) 951
BsaJI CCNNGG 5 cut(s) 67, 115, 499, 2256, 2547
BsaXI ACNNNNNCTCC 3 cut(s) 26, 916, 946
Bsc4I CCNNNNNNNGG 6 cut(s) 22, 214, 491, 2198, 2553, 2669
Bse118I RCCGGY 2 cut(s) 1878, 2494
Bse1I ACTGG 5 cut(s) 53, 677, 835, 1132, 2119
Bse3DI GCAATG 3 cut(s) 2245, 2388, 2526
Bse8I GATNNNNATC 1 cut(s) 951
BseBI CCWGG 3 cut(s) 215, 455, 2548
BseCI ATCGAT 1 cut(s) 327
BseDI CCNNGG 5 cut(s) 67, 115, 499, 2256, 2547
BseGI GGATG 9 cut(s) 63, 366, 597, 1294, 1639, 2123, 2188, 2208, 2740
BseJI GATNNNNATC 1 cut(s) 951
BseLI CCNNNNNNNGG 6 cut(s) 22, 214, 491, 2198, 2553, 2669
BseMI GCAATG 3 cut(s) 2245, 2388, 2526
BseMII CTCAG 4 cut(s) 447, 885, 1335, 1803
BseNI ACTGG 5 cut(s) 53, 677, 835, 1132, 2119
BseRI GAGGAG 1 cut(s) 1109
BseSI GKGCMC 3 cut(s) 2014, 2576, 2614
BseXI GCAGC 8 cut(s) 183, 294, 1795, 1990, 2573, 2576, 2578, 2739
BseYI CCCAGC 3 cut(s) 238, 278, 388
BsgI GTGCAG 1 cut(s) 2737
Bsh1236I CGCG 2 cut(s) 117, 2667
BshNI GGYRCC 2 cut(s) 2011, 2497
BshVI ATCGAT 1 cut(s) 327
BsiHKAI GWGCWC 2 cut(s) 1700, 2576
BsiSI CCGG 3 cut(s) 1879, 2495, 2771
BslFI GGGAC 3 cut(s) 59, 2244, 2719
BslI CCNNNNNNNGG 6 cut(s) 22, 214, 491, 2198, 2553, 2669
BsmAI GTCTC 2 cut(s) 1407, 1913
BsmFI GGGAC 3 cut(s) 59, 2244, 2719
Bsp119I TTCGAA 1 cut(s) 2419
Bsp1286I GDGCHC 5 cut(s) 538, 1700, 2014, 2576, 2614
Bsp1720I GCTNAGC 1 cut(s) 1812
Bsp19I CCATGG 2 cut(s) 499, 2256
BspCNI CTCAG 4 cut(s) 446, 884, 1336, 1804
BspDI ATCGAT 1 cut(s) 327
BspFNI CGCG 2 cut(s) 117, 2667
BspHI TCATGA 1 cut(s) 1147
BspLI GGNNCC 9 cut(s) 219, 597, 906, 2013, 2128, 2232, 2254, 2499, 2620
BspMAI CTGCAG 2 cut(s) 2521, 2596
BspMI ACCTGC 1 cut(s) 2709
BspT104I TTCGAA 1 cut(s) 2419
BspT107I GGYRCC 2 cut(s) 2011, 2497
BsrBI CCGCTC 1 cut(s) 2305
BsrDI GCAATG 3 cut(s) 2245, 2388, 2526
BsrFI RCCGGY 2 cut(s) 1878, 2494
BsrI ACTGG 5 cut(s) 53, 677, 835, 1132, 2119
BssAI RCCGGY 2 cut(s) 1878, 2494
BssECI CCNNGG 5 cut(s) 67, 115, 499, 2256, 2547
BssT1I CCWWGG 2 cut(s) 499, 2256
Bst2UI CCWGG 3 cut(s) 215, 455, 2548
Bst4CI ACNGT 1 cut(s) 922
Bst6I CTCTTC 2 cut(s) 1377, 1506
BstBAI YACGTR 3 cut(s) 1138, 2219, 2291
BstBI TTCGAA 1 cut(s) 2419
BstC8I GCNNGC 3 cut(s) 741, 1253, 2080
BstDEI CTNAG 5 cut(s) 433, 871, 1344, 1812, 2152
BstDSI CCRYGG 4 cut(s) 67, 115, 499, 2256
BstF5I GGATG 9 cut(s) 63, 366, 597, 1294, 1639, 2123, 2188, 2208, 2740
BstFNI CGCG 2 cut(s) 117, 2667
BstH2I RGCGCY 1 cut(s) 1327
BstHHI GCGC 1 cut(s) 1326
BstMAI GTCTC 2 cut(s) 1407, 1913
BstMWI GCNNNNNNNGC 8 cut(s) 196, 524, 533, 2009, 2138, 2673, 2724, 2781
BstNI CCWGG 3 cut(s) 215, 455, 2548
BstNSI RCATGY 5 cut(s) 722, 1529, 1682, 1742, 2082
BstSCI CCNGG 4 cut(s) 213, 453, 2546, 2770
BstSFI CTRYAG 2 cut(s) 2517, 2592
BstSLI GKGCMC 3 cut(s) 2014, 2576, 2614
BstSNI TACGTA 1 cut(s) 2291
BstUI CGCG 2 cut(s) 117, 2667
BstV1I GCAGC 8 cut(s) 183, 294, 1795, 1990, 2573, 2576, 2578, 2739
BstV2I GAAGAC 2 cut(s) 2472, 2493
BstX2I RGATCY 5 cut(s) 6, 904, 1504, 1826, 2618
BstXI CCANNNNNNTGG 4 cut(s) 293, 830, 942, 1263
BstYI RGATCY 5 cut(s) 6, 904, 1504, 1826, 2618
Bsu15I ATCGAT 1 cut(s) 327
BsuI GTATCC 1 cut(s) 922
BsuTUI ATCGAT 1 cut(s) 327
BtgI CCRYGG 4 cut(s) 67, 115, 499, 2256
BtsCI GGATG 9 cut(s) 63, 366, 597, 1294, 1639, 2123, 2188, 2208, 2740
BtsI GCAGTG 2 cut(s) 2166, 2683
BtsIMutI CAGTG 5 cut(s) 828, 1125, 2112, 2166, 2683
BveI ACCTGC 1 cut(s) 2709
Cac8I GCNNGC 3 cut(s) 741, 1253, 2080
CaiI CAGNNNCTG 1 cut(s) 926
CciI TCATGA 1 cut(s) 1147
CfoI GCGC 1 cut(s) 1326
Cfr10I RCCGGY 2 cut(s) 1878, 2494
Cfr13I GGNCC 8 cut(s) 217, 310, 576, 595, 675, 2050, 2231, 2695
Cfr42I CCGCGG 1 cut(s) 118
ClaI ATCGAT 1 cut(s) 327
CseI GACGC 1 cut(s) 1088
Csp6I GTAC 2 cut(s) 13, 2498
CviQI GTAC 2 cut(s) 13, 2498
DdeI CTNAG 5 cut(s) 433, 871, 1344, 1812, 2152
DraI TTTAAA 3 cut(s) 1362, 1855, 2343
DrdI GACNNNNNNGTC 1 cut(s) 58
DseDI GACNNNNNNGTC 1 cut(s) 58
EaeI YGGCCR 4 cut(s) 126, 493, 1069, 2584
Eam1104I CTCTTC 2 cut(s) 1377, 1506
EarI CTCTTC 2 cut(s) 1377, 1506
EciI GGCGGA 1 cut(s) 586
Eco105I TACGTA 1 cut(s) 2291
Eco130I CCWWGG 2 cut(s) 499, 2256
Eco24I GRGCYC 1 cut(s) 538
Eco32I GATATC 1 cut(s) 2210
Eco47I GGWCC 4 cut(s) 675, 2050, 2231, 2695
Eco57I CTGAAG 2 cut(s) 941, 1691
EcoO109I RGGNCCY 3 cut(s) 310, 2050, 2231
EcoRI GAATTC 1 cut(s) 866
EcoRII CCWGG 3 cut(s) 213, 453, 2546
EcoRV GATATC 1 cut(s) 2210
EcoT14I CCWWGG 2 cut(s) 499, 2256
EcoT22I ATGCAT 2 cut(s) 1059, 1066
EcoT38I GRGCYC 1 cut(s) 538
ErhI CCWWGG 2 cut(s) 499, 2256
FaqI GGGAC 3 cut(s) 59, 2244, 2719
FauNDI CATATG 2 cut(s) 1243, 1567
FblI GTMKAC 2 cut(s) 1572, 2109
FokI GGATG 9 cut(s) 50, 353, 604, 1301, 1626, 2130, 2175, 2215, 2727
FriOI GRGCYC 1 cut(s) 538
FspBI CTAG 7 cut(s) 35, 182, 314, 881, 1016, 1353, 2785
GlaI GCGC 1 cut(s) 1325
GsaI CCCAGC 3 cut(s) 242, 282, 392
GsuI CTGGAG 1 cut(s) 918
HaeII RGCGCY 1 cut(s) 1327
HapII CCGG 3 cut(s) 1879, 2495, 2771
HgaI GACGC 1 cut(s) 1088
HhaI GCGC 1 cut(s) 1326
Hin6I GCGC 1 cut(s) 1324
HinP1I GCGC 1 cut(s) 1324
HinfI GANTC 6 cut(s) 349, 1144, 1487, 1579, 1658, 2379
HpaII CCGG 3 cut(s) 1879, 2495, 2771
HphI GGTGA 3 cut(s) 104, 791, 1031
Hpy166II GTNNAC 5 cut(s) 1135, 1573, 2100, 2110, 2574
Hpy188I TCNGA 9 cut(s) 420, 451, 543, 874, 960, 1090, 1486, 1492, 1504
Hpy8I GTNNAC 5 cut(s) 1135, 1573, 2100, 2110, 2574
Hpy99I CGWCG 2 cut(s) 134, 567
HpyAV CCTTC 8 cut(s) 218, 274, 2037, 2041, 2117, 2192, 2364, 2696
HpyCH4III ACNGT 1 cut(s) 922
HpyCH4IV ACGT 8 cut(s) 106, 1137, 1858, 1900, 2067, 2218, 2290, 2434
HpyF10VI GCNNNNNNNGC 8 cut(s) 196, 524, 533, 2009, 2138, 2673, 2724, 2781
HpyF3I CTNAG 5 cut(s) 433, 871, 1344, 1812, 2152
HpySE526I ACGT 8 cut(s) 106, 1137, 1858, 1900, 2067, 2218, 2290, 2434
HspAI GCGC 1 cut(s) 1324
KpnI GGTACC 1 cut(s) 2501
KspI CCGCGG 1 cut(s) 118
LmnI GCTCC 2 cut(s) 1096, 1891
Lsp1109I GCAGC 8 cut(s) 183, 294, 1795, 1990, 2573, 2576, 2578, 2739
LweI GCATC 8 cut(s) 752, 938, 1073, 1219, 2128, 2146, 2193, 2749
MaeI CTAG 7 cut(s) 35, 182, 314, 881, 1016, 1353, 2785
MaeII ACGT 8 cut(s) 106, 1137, 1858, 1900, 2067, 2218, 2290, 2434
MaeIII GTNAC 3 cut(s) 922, 1586, 2657
MbiI CCGCTC 1 cut(s) 2305
MfeI CAATTG 3 cut(s) 509, 1377, 1983
MflI RGATCY 5 cut(s) 6, 904, 1504, 1826, 2618
MhlI GDGCHC 5 cut(s) 538, 1700, 2014, 2576, 2614
MlsI TGGCCA 2 cut(s) 1071, 2586
MluNI TGGCCA 2 cut(s) 1071, 2586
MlyI GAGTC 3 cut(s) 343, 1652, 2373
MmeI TCCRAC 4 cut(s) 443, 474, 702, 939
Mox20I TGGCCA 2 cut(s) 1071, 2586
Mph1103I ATGCAT 2 cut(s) 1059, 1066
MscI TGGCCA 2 cut(s) 1071, 2586
MseI TTAA 9 cut(s) 338, 840, 990, 1176, 1361, 1631, 1854, 2268, 2342
MslI CAYNNNNRTG 7 cut(s) 584, 1439, 1538, 1614, 1802, 2193, 2217
Msp20I TGGCCA 2 cut(s) 1071, 2586
MspA1I CMGCKG 5 cut(s) 56, 117, 196, 668, 2730
MspI CCGG 3 cut(s) 1879, 2495, 2771
MspR9I CCNGG 4 cut(s) 215, 455, 2548, 2772
MunI CAATTG 3 cut(s) 509, 1377, 1983
MvaI CCWGG 3 cut(s) 215, 455, 2548
MvnI CGCG 2 cut(s) 117, 2667
MwoI GCNNNNNNNGC 8 cut(s) 196, 524, 533, 2009, 2138, 2673, 2724, 2781
NciI CCSGG 1 cut(s) 2772
NcoI CCATGG 2 cut(s) 499, 2256
NdeI CATATG 2 cut(s) 1243, 1567
NlaIV GGNNCC 9 cut(s) 219, 597, 906, 2013, 2128, 2232, 2254, 2499, 2620
NmeAIII GCCGAG 1 cut(s) 471
NmuCI GTSAC 1 cut(s) 1586
NsiI ATGCAT 2 cut(s) 1059, 1066
NspI RCATGY 5 cut(s) 722, 1529, 1682, 1742, 2082
NspV TTCGAA 1 cut(s) 2419
PaeI GCATGC 1 cut(s) 2082
PagI TCATGA 1 cut(s) 1147
PaqCI CACCTGC 1 cut(s) 2709
PciI ACATGT 4 cut(s) 718, 1525, 1678, 1738
PfeI GAWTC 3 cut(s) 1144, 1487, 1579
PleI GAGTC 3 cut(s) 343, 1652, 2373
PpsI GAGTC 3 cut(s) 343, 1652, 2373
Ppu21I YACGTR 3 cut(s) 1138, 2219, 2291
PpuMI RGGWCCY 2 cut(s) 2050, 2231
PscI ACATGT 4 cut(s) 718, 1525, 1678, 1738
PshBI ATTAAT 1 cut(s) 1176
Psp5II RGGWCCY 2 cut(s) 2050, 2231
Psp6I CCWGG 3 cut(s) 213, 453, 2546
PspFI CCCAGC 3 cut(s) 238, 278, 388
PspGI CCWGG 3 cut(s) 213, 453, 2546
PspN4I GGNNCC 9 cut(s) 219, 597, 906, 2013, 2128, 2232, 2254, 2499, 2620
PspPI GGNCC 8 cut(s) 217, 310, 576, 595, 675, 2050, 2231, 2695
PspPPI RGGWCCY 2 cut(s) 2050, 2231
PstI CTGCAG 2 cut(s) 2521, 2596
PstNI CAGNNNCTG 1 cut(s) 926
PsuI RGATCY 5 cut(s) 6, 904, 1504, 1826, 2618
PvuII CAGCTG 2 cut(s) 56, 668
RsaI GTAC 2 cut(s) 14, 2499
RsaNI GTAC 2 cut(s) 13, 2498
RseI CAYNNNNRTG 7 cut(s) 584, 1439, 1538, 1614, 1802, 2193, 2217
SacII CCGCGG 1 cut(s) 118
SaqAI TTAA 9 cut(s) 338, 840, 990, 1176, 1361, 1631, 1854, 2268, 2342
Sau96I GGNCC 8 cut(s) 217, 310, 576, 595, 675, 2050, 2231, 2695
SchI GAGTC 3 cut(s) 343, 1652, 2373
ScrFI CCNGG 4 cut(s) 215, 455, 2548, 2772
SduI GDGCHC 5 cut(s) 538, 1700, 2014, 2576, 2614
SfaNI GCATC 8 cut(s) 752, 938, 1073, 1219, 2128, 2146, 2193, 2749
SfcI CTRYAG 2 cut(s) 2517, 2592
Sfr303I CCGCGG 1 cut(s) 118
SfuI TTCGAA 1 cut(s) 2419
SgrBI CCGCGG 1 cut(s) 118
SinI GGWCC 4 cut(s) 675, 2050, 2231, 2695
SmiMI CAYNNNNRTG 7 cut(s) 584, 1439, 1538, 1614, 1802, 2193, 2217
SnaBI TACGTA 1 cut(s) 2291
SphI GCATGC 1 cut(s) 2082
SspI AATATT 4 cut(s) 696, 1026, 1180, 1894
SspMI CTAG 7 cut(s) 35, 182, 314, 881, 1016, 1353, 2785
StyD4I CCNGG 4 cut(s) 213, 453, 2546, 2770
StyI CCWWGG 2 cut(s) 499, 2256
TaaI ACNGT 1 cut(s) 922
TaiI ACGT 8 cut(s) 109, 1140, 1861, 1903, 2070, 2221, 2293, 2437
TaqI TCGA 5 cut(s) 132, 327, 460, 1965, 2419
TauI GCSGC 4 cut(s) 75, 193, 196, 2740
TfiI GAWTC 3 cut(s) 1144, 1487, 1579
Tru1I TTAA 9 cut(s) 338, 840, 990, 1176, 1361, 1631, 1854, 2268, 2342
Tru9I TTAA 9 cut(s) 338, 840, 990, 1176, 1361, 1631, 1854, 2268, 2342
TscAI CASTG 5 cut(s) 835, 1132, 2119, 2166, 2683
TseFI GTSAC 1 cut(s) 1586
TseI GCWGC 8 cut(s) 196, 282, 1808, 2003, 2561, 2564, 2591, 2727
Tsp45I GTSAC 1 cut(s) 1586
TspGWI ACGGA 1 cut(s) 1947
TspRI CASTG 5 cut(s) 835, 1132, 2119, 2166, 2683
VneI GTGCAC 1 cut(s) 2572
VpaK11BI GGWCC 4 cut(s) 675, 2050, 2231, 2695
VspI ATTAAT 1 cut(s) 1176
XapI RAATTY 5 cut(s) 836, 866, 980, 1545, 1932
XceI RCATGY 5 cut(s) 722, 1529, 1682, 1742, 2082
XcmI CCANNNNNNNNNTGG 2 cut(s) 435, 2594
XmiI GTMKAC 2 cut(s) 1572, 2109
XspI CTAG 7 cut(s) 35, 182, 314, 881, 1016, 1353, 2785
Zsp2I ATGCAT 2 cut(s) 1059, 1066
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.