Prupe.2G102600_v2.0.a1
MYB Family

Myb/SANT-like DNA-binding domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
15843699 .. 15848238
4540 bp
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UTR
Exon/CDS
Intron
Prupe.2G102600.1

Sequence Viewer

Length: 396 bp
ATGGTTCTCAAAACACCAAATGGAAATTCATGGGAGATATTCAACACCACTATTGCAACTGATCAATTGCGTTATGCCTCTAATCAACTTCCTCTTAACTCAGATGAAGAGCGTAAGTTAGAGAACAACTTCCTTAACATTGGTGTTCACATTGATGTTGACTCGGATGATGATGGTATTAACCTGAAAATTGATCATGAAAAAAGTCTTGAGGCATTTAGCACCTCCAAGGAGATGTATTCTATTGAAGAATGCATCAGACTTGTTGAAGAAATGGTGGACATTGATAATGACACATTCAACAAGATGCTAGAAAAAATTGTGCTTATTGAATGGAGGAAAATATTTGTTACAATGTCGGATGCTATGAGGAAAGCTGGGTTAGCTAGTCTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

132

Amino Acids

15.07

Weight (kDa)

4.52

Isoelectric Point (pI)

36.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 25
AgsI TTSAA 5 cut(s) 43, 248, 269, 301, 332
AjuI GAANNNNNNNTTGG 2 cut(s) 10, 42
AluBI AGCT 2 cut(s) 377, 386
AluI AGCT 2 cut(s) 377, 386
ApoI RAATTY 1 cut(s) 25
Asp700I GAANNNNTTC 1 cut(s) 128
BccI CCATC 1 cut(s) 167
BclI TGATCA 2 cut(s) 61, 193
BfaI CTAG 2 cut(s) 311, 387
BmsI GCATC 3 cut(s) 264, 297, 352
BpuEI CTTGAG 1 cut(s) 230
BsaJI CCNNGG 1 cut(s) 228
BseDI CCNNGG 1 cut(s) 228
BseGI GGATG 2 cut(s) 172, 367
BseMII CTCAG 1 cut(s) 114
BseYI CCCAGC 1 cut(s) 377
BsmI GAATGC 1 cut(s) 257
Bsp143I GATC 2 cut(s) 61, 193
BspCNI CTCAG 1 cut(s) 113
BspHI TCATGA 1 cut(s) 196
BspQI GCTCTTC 1 cut(s) 102
BssECI CCNNGG 1 cut(s) 228
BssMI GATC 2 cut(s) 61, 193
BssT1I CCWWGG 1 cut(s) 228
Bst6I CTCTTC 1 cut(s) 102
BstDEI CTNAG 1 cut(s) 100
BstF5I GGATG 2 cut(s) 172, 367
BstKTI GATC 2 cut(s) 64, 196
BstMBI GATC 2 cut(s) 61, 193
BstMWI GCNNNNNNNGC 1 cut(s) 383
BtsCI GGATG 2 cut(s) 172, 367
CciI TCATGA 1 cut(s) 196
CviAII CATG 2 cut(s) 30, 197
CviJI RGCY 2 cut(s) 377, 386
CviKI_1 RGCY 2 cut(s) 377, 386
DdeI CTNAG 1 cut(s) 100
DpnI GATC 2 cut(s) 63, 195
DpnII GATC 2 cut(s) 61, 193
Eam1104I CTCTTC 1 cut(s) 102
EarI CTCTTC 1 cut(s) 102
Eco130I CCWWGG 1 cut(s) 228
EcoT14I CCWWGG 1 cut(s) 228
EcoT22I ATGCAT 1 cut(s) 257
ErhI CCWWGG 1 cut(s) 228
FaeI CATG 2 cut(s) 33, 200
FaiI YATR 4 cut(s) 31, 75, 198, 368
FatI CATG 2 cut(s) 29, 196
FbaI TGATCA 2 cut(s) 61, 193
FokI GGATG 2 cut(s) 179, 374
FspBI CTAG 2 cut(s) 311, 387
GsaI CCCAGC 1 cut(s) 381
Hin1II CATG 2 cut(s) 33, 200
HincII GTYRAC 1 cut(s) 160
HindII GTYRAC 1 cut(s) 160
HinfI GANTC 1 cut(s) 161
Hpy166II GTNNAC 3 cut(s) 148, 160, 280
Hpy188I TCNGA 4 cut(s) 103, 166, 260, 361
Hpy188III TCNNGA 2 cut(s) 197, 209
Hpy8I GTNNAC 3 cut(s) 148, 160, 280
HpyCH4V TGCA 2 cut(s) 56, 255
HpyF10VI GCNNNNNNNGC 1 cut(s) 383
HpyF3I CTNAG 1 cut(s) 100
Hsp92II CATG 2 cut(s) 33, 200
Ksp22I TGATCA 2 cut(s) 61, 193
Kzo9I GATC 2 cut(s) 61, 193
LguI GCTCTTC 1 cut(s) 102
LpnPI CCDG 2 cut(s) 197, 363
LweI GCATC 3 cut(s) 264, 297, 352
MaeI CTAG 2 cut(s) 311, 387
MaeIII GTNAC 1 cut(s) 349
MalI GATC 2 cut(s) 63, 195
MboI GATC 2 cut(s) 61, 193
MboII GAAGA 3 cut(s) 119, 260, 281
MfeI CAATTG 1 cut(s) 65
MluCI AATT 4 cut(s) 25, 65, 189, 318
MlyI GAGTC 1 cut(s) 155
MmeI TCCRAC 1 cut(s) 339
MnlI CCTC 6 cut(s) 88, 102, 205, 235, 330, 363
Mph1103I ATGCAT 1 cut(s) 257
MroXI GAANNNNTTC 1 cut(s) 128
MseI TTAA 3 cut(s) 96, 135, 180
MslI CAYNNNNRTG 1 cut(s) 153
MunI CAATTG 1 cut(s) 65
Mva1269I GAATGC 1 cut(s) 257
MwoI GCNNNNNNNGC 1 cut(s) 383
NdeII GATC 2 cut(s) 61, 193
NlaIII CATG 2 cut(s) 33, 200
NsiI ATGCAT 1 cut(s) 257
PagI TCATGA 1 cut(s) 196
PciSI GCTCTTC 1 cut(s) 102
PctI GAATGC 1 cut(s) 257
PdmI GAANNNNTTC 1 cut(s) 128
PleI GAGTC 1 cut(s) 155
PpsI GAGTC 1 cut(s) 155
PspFI CCCAGC 1 cut(s) 377
RseI CAYNNNNRTG 1 cut(s) 153
SapI GCTCTTC 1 cut(s) 102
SaqAI TTAA 3 cut(s) 96, 135, 180
Sau3AI GATC 2 cut(s) 61, 193
SchI GAGTC 1 cut(s) 155
SetI ASST 4 cut(s) 186, 227, 379, 388
SfaNI GCATC 3 cut(s) 264, 297, 352
SmiMI CAYNNNNRTG 1 cut(s) 153
SmlI CTYRAG 1 cut(s) 209
SmoI CTYRAG 1 cut(s) 209
Sse9I AATT 4 cut(s) 25, 65, 189, 318
SspI AATATT 1 cut(s) 345
SspMI CTAG 2 cut(s) 311, 387
StyI CCWWGG 1 cut(s) 228
TasI AATT 4 cut(s) 25, 65, 189, 318
Tru1I TTAA 3 cut(s) 96, 135, 180
Tru9I TTAA 3 cut(s) 96, 135, 180
TspDTI ATGAA 3 cut(s) 18, 120, 213
XapI RAATTY 1 cut(s) 25
XmnI GAANNNNTTC 1 cut(s) 128
XspI CTAG 2 cut(s) 311, 387
Zsp2I ATGCAT 1 cut(s) 257
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.