Prupe.5G219500_v2.0.a1

Protein PLANT CADMIUM RESISTANCE

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000960
Physical Location & Seq
Forward (+)
17127604 .. 17129486
1883 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G219500.1

Sequence Viewer

Length: 1254 bp
ATGGGACGTCCTGAGGCACAAACTTGTGATGCTCAACCGCATCCTCTTGAACATCAACCAAACCAGGCGCCGTTCAAATTCGCAGTACATGCGCAACAACCCCAGCAGCAGCTGCCTGCAGAACAGCTTCCGCCTCCAAATAACCCCTCTACTGTTATAGAACCTAGTCCTGATCACGAGGCAGATGATGATCATCATGAACATCAAGCAATTGCAAACCATCATGATCAAACTCATGAACATCAAGCCATGCAGCCCCACTATAACCCTCTACAGCTTGCACCCCAAAACCCCTCCCACAGCGTTGGAACATCACGTCCTGATCATCATCAACAACCCCGGCCTTTACATCTTGCGGCACAATTGCCACCCACAAACCCCTATAACACCAATCTCATGTTACACCATTATCATTGGCCTCACCATAATTATAATGCGCCTGCACCACCAGCGGCATACCAAGTACACCCCCAACAACAAGCATTGATGCCAACTGGCCCAGCAGCACCACGCCCACATCCAACTCCAACTCCATATTATCCTCCTCTTCCTGTTCCTCTTCCTCTTCCTCATCATCATCACCACGCTTCTTCTGATCCCGCAATTTATTATACTACACCACAAGTGCTTTTCCCTCCTCCGGCTGCTTACCAATTTGTTCCTCGTCACTCTGGACAACTGCAATATTATAGCAATCCTGTTGCTGCAGCTAGAAATCAGCTGCCGCCTCTACATTATAACCCTAATTATATTGCAGAAACAGGAATACCCGTCCAAAATGTTCAATACCTACCAATGCTGCTGCCTCAGCCCGCTGGCATAGACGGTGCTTGGAAAACAGGGCTTTTTCAGTGCTTAGATGACCCCCCAAATGCTATCATGACGTTATTCTGCCCGTGCTGGACATTCGGTCAGGTTGCAGAGATTGTCAACAATGGTCAAACCTCGTGCGCAGTCAATTCACTGATTTACATGCTGATTACGGTGTGCATCTTTGTGCCATGCTTGCTATCATGCACATATCGGAAAAAGCTAAGGAACAAGTTTGACCTACCTGAAAGCCCTGCTCCCGACTGCATCATTCACTTCTTATGTGAGTGGTGTGCTCTCTGCCAAGAACATAGGGAGCTCGAGCTCAGAGGCCTGGACCCTTCTTTAGGATGGGTGGGAAACATGGAGCATATGCAGAGGTTGCAGCAAAAGCGGCAAGCTGCCATGGCTCCCCCAGCGACCCAAAGAATGACTGGATATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PLAC8

Protein Analysis

418

Amino Acids

46.92

Weight (kDa)

6.34

Isoelectric Point (pI)

56.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 432, 738
AatII GACGTC 1 cut(s) 10
Acc16I TGCGCA 2 cut(s) 93, 952
AccB1I GGYRCC 1 cut(s) 67
AciI CCGC 8 cut(s) 38, 131, 356, 452, 600, 725, 813, 1204
AclWI GGATC 1 cut(s) 590
AcsI RAATTY 1 cut(s) 77
AcyI GRCGYC 2 cut(s) 7, 68
AfaI GTAC 2 cut(s) 87, 465
AfiI CCNNNNNNNGG 2 cut(s) 640, 1157
AgsI TTSAA 3 cut(s) 50, 76, 785
AhdI GACNNNNNGTC 1 cut(s) 909
AjiI CACGTC 1 cut(s) 317
AjnI CCWGG 2 cut(s) 63, 1143
AloI GAACNNNNNNTCC 2 cut(s) 301, 333
AluBI AGCT 9 cut(s) 112, 127, 277, 710, 721, 1033, 1129, 1135, 1211
AluI AGCT 9 cut(s) 112, 127, 277, 710, 721, 1033, 1129, 1135, 1211
Alw21I GWGCWC 3 cut(s) 1108, 1131, 1137
AlwI GGATC 1 cut(s) 590
AlwNI CAGNNNCTG 1 cut(s) 112
Ama87I CYCGRG 1 cut(s) 1130
AoxI GGCC 4 cut(s) 341, 416, 496, 1141
ApoI RAATTY 1 cut(s) 77
Asp700I GAANNNNTTC 1 cut(s) 126
AspLEI GCGC 4 cut(s) 70, 94, 439, 953
AspS9I GGNCC 2 cut(s) 497, 1147
AsuC2I CCSGG 1 cut(s) 340
AsuHPI GGTGA 2 cut(s) 413, 572
AvaI CYCGRG 1 cut(s) 1130
AvaII GGWCC 1 cut(s) 1147
AxyI CCTNAGG 1 cut(s) 12
BanI GGYRCC 1 cut(s) 67
BanII GRGCYC 2 cut(s) 1131, 1137
BauI CACGAG 2 cut(s) 176, 946
Bbv12I GWGCWC 3 cut(s) 1108, 1131, 1137
BbvCI CCTCAGC 1 cut(s) 807
BccI CCATC 2 cut(s) 228, 1155
BceAI ACGGC 1 cut(s) 55
BciT130I CCWGG 2 cut(s) 65, 1145
BclI TGATCA 4 cut(s) 172, 190, 226, 322
BcnI CCSGG 1 cut(s) 340
BfaI CTAG 2 cut(s) 165, 711
BfmI CTRYAG 3 cut(s) 117, 272, 705
BfoI RGCGCY 1 cut(s) 71
Bme1390I CCNGG 3 cut(s) 65, 340, 1145
Bme18I GGWCC 1 cut(s) 1147
BmeRI GACNNNNNGTC 1 cut(s) 909
BmeT110I CYCGRG 1 cut(s) 1130
BmgBI CACGTC 1 cut(s) 317
BmgT120I GGNCC 2 cut(s) 497, 1147
BmiI GGNNCC 3 cut(s) 69, 1149, 1221
BmrFI CCNGG 3 cut(s) 65, 340, 1145
BmsI GCATC 5 cut(s) 19, 49, 477, 999, 1086
Bpu10I CCTNAGC 2 cut(s) 807, 1034
BpuMI CCSGG 1 cut(s) 340
BsaBI GATNNNNATC 3 cut(s) 189, 192, 327
BsaHI GRCGYC 2 cut(s) 7, 68
BsaJI CCNNGG 2 cut(s) 338, 1215
BsaXI ACNNNNNCTCC 2 cut(s) 514, 544
Bsc4I CCNNNNNNNGG 2 cut(s) 640, 1157
Bse1I ACTGG 2 cut(s) 499, 1249
Bse21I CCTNAGG 1 cut(s) 12
Bse8I GATNNNNATC 3 cut(s) 189, 192, 327
BseBI CCWGG 2 cut(s) 65, 1145
BseDI CCNNGG 2 cut(s) 338, 1215
BseGI GGATG 3 cut(s) 40, 517, 1166
BseJI GATNNNNATC 3 cut(s) 189, 192, 327
BseLI CCNNNNNNNGG 2 cut(s) 640, 1157
BseMII CTCAG 2 cut(s) 821, 1150
BseNI ACTGG 2 cut(s) 499, 1249
BseRI GAGGAG 2 cut(s) 534, 627
BseYI CCCAGC 3 cut(s) 102, 499, 1225
BsgI GTGCAG 1 cut(s) 426
BshFI GGCC 4 cut(s) 343, 418, 498, 1143
BshNI GGYRCC 1 cut(s) 67
BsiHKAI GWGCWC 3 cut(s) 1108, 1131, 1137
BsiHKCI CYCGRG 1 cut(s) 1130
BsiSI CCGG 2 cut(s) 340, 641
BslFI GGGAC 1 cut(s) 18
BslI CCNNNNNNNGG 2 cut(s) 640, 1157
BsmFI GGGAC 1 cut(s) 18
BsnI GGCC 4 cut(s) 343, 418, 498, 1143
BsoBI CYCGRG 1 cut(s) 1130
Bsp1286I GDGCHC 3 cut(s) 1108, 1131, 1137
Bsp143I GATC 5 cut(s) 172, 190, 226, 322, 595
Bsp19I CCATGG 1 cut(s) 1215
BspACI CCGC 8 cut(s) 38, 131, 356, 452, 600, 725, 813, 1204
BspANI GGCC 4 cut(s) 343, 418, 498, 1143
BspCNI CTCAG 3 cut(s) 4, 820, 1149
BspHI TCATGA 4 cut(s) 196, 223, 235, 879
BspLI GGNNCC 3 cut(s) 69, 1149, 1221
BspMAI CTGCAG 2 cut(s) 121, 709
BspPI GGATC 1 cut(s) 590
BspT107I GGYRCC 1 cut(s) 67
BsrI ACTGG 2 cut(s) 499, 1249
BssECI CCNNGG 2 cut(s) 338, 1215
BssMI GATC 5 cut(s) 172, 190, 226, 322, 595
BssNI GRCGYC 2 cut(s) 7, 68
BssSI CACGAG 2 cut(s) 176, 946
BssT1I CCWWGG 1 cut(s) 1215
Bst2BI CACGAG 2 cut(s) 176, 946
Bst2UI CCWGG 2 cut(s) 65, 1145
Bst4CI ACNGT 3 cut(s) 154, 827, 985
Bst6I CTCTTC 3 cut(s) 552, 564, 570
BstACI GRCGYC 2 cut(s) 7, 68
BstAPI GCANNNNNTGC 3 cut(s) 89, 112, 1192
BstC8I GCNNGC 7 cut(s) 117, 279, 441, 813, 817, 1007, 1209
BstDEI CTNAG 5 cut(s) 12, 807, 856, 1034, 1136
BstDSI CCRYGG 1 cut(s) 1215
BstENI CCTNNNNNAGG 1 cut(s) 1155
BstF5I GGATG 3 cut(s) 40, 517, 1166
BstH2I RGCGCY 1 cut(s) 71
BstHHI GCGC 4 cut(s) 70, 94, 439, 953
BstKTI GATC 5 cut(s) 175, 193, 229, 325, 598
BstMBI GATC 5 cut(s) 172, 190, 226, 322, 595
BstNI CCWGG 2 cut(s) 65, 1145
BstNSI RCATGY 2 cut(s) 92, 976
BstSCI CCNGG 3 cut(s) 63, 338, 1143
BstSFI CTRYAG 3 cut(s) 117, 272, 705
BstXI CCANNNNNNTGG 1 cut(s) 305
Bsu36I CCTNAGG 1 cut(s) 12
BsuRI GGCC 4 cut(s) 343, 418, 498, 1143
BtgI CCRYGG 1 cut(s) 1215
BtrI CACGTC 1 cut(s) 317
BtsCI GGATG 3 cut(s) 40, 517, 1166
BtsIMutI CAGTG 2 cut(s) 857, 962
Cac8I GCNNGC 7 cut(s) 117, 279, 441, 813, 817, 1007, 1209
CaiI CAGNNNCTG 1 cut(s) 112
CciI TCATGA 4 cut(s) 196, 223, 235, 879
CfoI GCGC 4 cut(s) 70, 94, 439, 953
Cfr13I GGNCC 2 cut(s) 497, 1147
Csp6I GTAC 2 cut(s) 86, 464
CviQI GTAC 2 cut(s) 86, 464
DdeI CTNAG 5 cut(s) 12, 807, 856, 1034, 1136
DinI GGCGCC 1 cut(s) 69
DpnI GATC 5 cut(s) 174, 192, 228, 324, 597
DpnII GATC 5 cut(s) 172, 190, 226, 322, 595
DriI GACNNNNNGTC 1 cut(s) 909
Eam1104I CTCTTC 3 cut(s) 552, 564, 570
Eam1105I GACNNNNNGTC 1 cut(s) 909
EarI CTCTTC 3 cut(s) 552, 564, 570
EciI GGCGGA 1 cut(s) 120
Ecl136II GAGCTC 2 cut(s) 1129, 1135
Eco130I CCWWGG 1 cut(s) 1215
Eco147I AGGCCT 1 cut(s) 1143
Eco24I GRGCYC 2 cut(s) 1131, 1137
Eco47I GGWCC 1 cut(s) 1147
Eco53kI GAGCTC 2 cut(s) 1129, 1135
Eco81I CCTNAGG 1 cut(s) 12
Eco88I CYCGRG 1 cut(s) 1130
EcoICRI GAGCTC 2 cut(s) 1129, 1135
EcoNI CCTNNNNNAGG 1 cut(s) 1155
EcoRII CCWGG 2 cut(s) 63, 1143
EcoT14I CCWWGG 1 cut(s) 1215
EcoT38I GRGCYC 2 cut(s) 1131, 1137
EgeI GGCGCC 1 cut(s) 69
EheI GGCGCC 1 cut(s) 69
ErhI CCWWGG 1 cut(s) 1215
FaqI GGGAC 1 cut(s) 18
FauI CCCGC 2 cut(s) 607, 820
FauNDI CATATG 1 cut(s) 1182
FbaI TGATCA 4 cut(s) 172, 190, 226, 322
FokI GGATG 3 cut(s) 27, 504, 1173
FriOI GRGCYC 2 cut(s) 1131, 1137
FspBI CTAG 2 cut(s) 165, 711
FspI TGCGCA 2 cut(s) 93, 952
GlaI GCGC 4 cut(s) 69, 93, 438, 952
GsaI CCCAGC 3 cut(s) 106, 503, 1229
HaeII RGCGCY 1 cut(s) 71
HaeIII GGCC 4 cut(s) 343, 418, 498, 1143
HapII CCGG 2 cut(s) 340, 641
HhaI GCGC 4 cut(s) 70, 94, 439, 953
Hin1I GRCGYC 2 cut(s) 7, 68
Hin6I GCGC 4 cut(s) 68, 92, 437, 951
HinP1I GCGC 4 cut(s) 68, 92, 437, 951
HincII GTYRAC 1 cut(s) 931
HindII GTYRAC 1 cut(s) 931
HpaII CCGG 2 cut(s) 340, 641
HphI GGTGA 2 cut(s) 413, 572
Hpy166II GTNNAC 2 cut(s) 466, 931
Hpy188I TCNGA 3 cut(s) 595, 1026, 1139
Hpy8I GTNNAC 2 cut(s) 466, 931
HpyAV CCTTC 1 cut(s) 1161
HpyCH4III ACNGT 3 cut(s) 154, 827, 985
HpyCH4IV ACGT 3 cut(s) 7, 316, 884
HpyF3I CTNAG 5 cut(s) 12, 807, 856, 1034, 1136
HpySE526I ACGT 3 cut(s) 7, 316, 884
Hsp92I GRCGYC 2 cut(s) 7, 68
HspAI GCGC 4 cut(s) 68, 92, 437, 951
KasI GGCGCC 1 cut(s) 67
Ksp22I TGATCA 4 cut(s) 172, 190, 226, 322
Kzo9I GATC 5 cut(s) 172, 190, 226, 322, 595
LmnI GCTCC 4 cut(s) 1072, 1126, 1177, 1225
LweI GCATC 5 cut(s) 19, 49, 477, 999, 1086
MaeI CTAG 2 cut(s) 165, 711
MaeII ACGT 3 cut(s) 7, 316, 884
MaeIII GTNAC 2 cut(s) 399, 665
MalI GATC 5 cut(s) 174, 192, 228, 324, 597
MboI GATC 5 cut(s) 172, 190, 226, 322, 595
MboII GAAGA 4 cut(s) 539, 551, 557, 582
MfeI CAATTG 2 cut(s) 210, 362
MhlI GDGCHC 3 cut(s) 1108, 1131, 1137
MluCI AATT 8 cut(s) 77, 210, 362, 427, 603, 653, 745, 958
Mly113I GGCGCC 1 cut(s) 68
MmeI TCCRAC 3 cut(s) 286, 545, 551
MroXI GAANNNNTTC 1 cut(s) 126
MseI TTAA 1 cut(s) 1252
MslI CAYNNNNRTG 1 cut(s) 995
MspA1I CMGCKG 4 cut(s) 112, 452, 721, 815
MspI CCGG 2 cut(s) 340, 641
MspR9I CCNGG 3 cut(s) 65, 340, 1145
MunI CAATTG 2 cut(s) 210, 362
MvaI CCWGG 2 cut(s) 65, 1145
NarI GGCGCC 1 cut(s) 68
NciI CCSGG 1 cut(s) 340
NcoI CCATGG 1 cut(s) 1215
NdeI CATATG 1 cut(s) 1182
NdeII GATC 5 cut(s) 172, 190, 226, 322, 595
NlaIV GGNNCC 3 cut(s) 69, 1149, 1221
NmuCI GTSAC 1 cut(s) 665
NsbI TGCGCA 2 cut(s) 93, 952
NspI RCATGY 2 cut(s) 92, 976
PaeR7I CTCGAG 1 cut(s) 1130
PagI TCATGA 4 cut(s) 196, 223, 235, 879
PceI AGGCCT 1 cut(s) 1143
PdmI GAANNNNTTC 1 cut(s) 126
PluTI GGCGCC 1 cut(s) 71
PsiI TTATAA 2 cut(s) 432, 738
Psp124BI GAGCTC 2 cut(s) 1131, 1137
Psp6I CCWGG 2 cut(s) 63, 1143
PspFI CCCAGC 3 cut(s) 102, 499, 1225
PspGI CCWGG 2 cut(s) 63, 1143
PspN4I GGNNCC 3 cut(s) 69, 1149, 1221
PspPI GGNCC 2 cut(s) 497, 1147
PspXI VCTCGAGB 1 cut(s) 1130
PstI CTGCAG 2 cut(s) 121, 709
PstNI CAGNNNCTG 1 cut(s) 112
PvuII CAGCTG 2 cut(s) 112, 721
RsaI GTAC 2 cut(s) 87, 465
RsaNI GTAC 2 cut(s) 86, 464
RseI CAYNNNNRTG 1 cut(s) 995
SacI GAGCTC 2 cut(s) 1131, 1137
SaqAI TTAA 1 cut(s) 1252
Sau3AI GATC 5 cut(s) 172, 190, 226, 322, 595
Sau96I GGNCC 2 cut(s) 497, 1147
ScrFI CCNGG 3 cut(s) 65, 340, 1145
SduI GDGCHC 3 cut(s) 1108, 1131, 1137
SfaNI GCATC 5 cut(s) 19, 49, 477, 999, 1086
SfcI CTRYAG 3 cut(s) 117, 272, 705
SfoI GGCGCC 1 cut(s) 69
Sfr274I CTCGAG 1 cut(s) 1130
SinI GGWCC 1 cut(s) 1147
SlaI CTCGAG 1 cut(s) 1130
SmiMI CAYNNNNRTG 1 cut(s) 995
SmlI CTYRAG 1 cut(s) 1130
SmoI CTYRAG 1 cut(s) 1130
Sse9I AATT 8 cut(s) 77, 210, 362, 427, 603, 653, 745, 958
SseBI AGGCCT 1 cut(s) 1143
SsiI CCGC 8 cut(s) 38, 131, 356, 452, 600, 725, 813, 1204
SspDI GGCGCC 1 cut(s) 67
SspI AATATT 1 cut(s) 686
SspMI CTAG 2 cut(s) 165, 711
SstI GAGCTC 2 cut(s) 1131, 1137
StuI AGGCCT 1 cut(s) 1143
StyD4I CCNGG 3 cut(s) 63, 338, 1143
StyI CCWWGG 1 cut(s) 1215
TaaI ACNGT 3 cut(s) 154, 827, 985
TaiI ACGT 3 cut(s) 10, 319, 887
TaqI TCGA 1 cut(s) 1131
TaqII GACCGA 1 cut(s) 899
TasI AATT 8 cut(s) 77, 210, 362, 427, 603, 653, 745, 958
TatI WGTACW 2 cut(s) 85, 463
TauI GCSGC 4 cut(s) 359, 455, 727, 1207
Tru1I TTAA 1 cut(s) 1252
Tru9I TTAA 1 cut(s) 1252
TscAI CASTG 2 cut(s) 857, 969
TseFI GTSAC 1 cut(s) 665
Tsp45I GTSAC 1 cut(s) 665
TspDTI ATGAA 2 cut(s) 213, 252
TspRI CASTG 2 cut(s) 857, 969
VpaK11BI GGWCC 1 cut(s) 1147
XagI CCTNNNNNAGG 1 cut(s) 1155
XapI RAATTY 1 cut(s) 77
XceI RCATGY 2 cut(s) 92, 976
XcmI CCANNNNNNNNNTGG 1 cut(s) 1241
XhoI CTCGAG 1 cut(s) 1130
XmnI GAANNNNTTC 1 cut(s) 126
XspI CTAG 2 cut(s) 165, 711
ZraI GACGTC 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.