Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0000775

Physical Location & Seq

Genomic Coordinates Forward (+)

21591694 .. 21595664

Gene Structure 3971 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G258800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2337 bp

ATGTCCATGTCCATGGGATCAAAAAATATCACTCCCCTTATCCTCTTCATCATCTTCCTTATTTCATCTCAATTTTATTCTTGTTCCTCCGCACAAACTTGGATCAGAGCTGGTTACTGGTACGCCGGTAGCGAGTCTCCCATACCTGACATCAACTCTGCCTTGTTCACTCATCTTATTTGTGCTTCTGCTGCTCTGAATTCCTCCACCTACCAGCTCTCCATCCCTTTCTCTCAAGAGCCATCCTTCTCCATCTTCACAGGTGTCGTCAAGCGCAAAAACCCATCAGTCATAACACTCCTATCCATCTGGAATGGACAAGCTGCAACAGCTCAATCAATTTTGGGTCAGAAAGTTAACTATTCAGTCTTGTCCTCAATGGTCAACAAACCTTCTAACAGAAAGTCTTTCATTGAGTCTTCAATCAAAACAGCAAGGCTTTATGGCTTCCAAGGTATAGACTTGCTTTGGCTTTGGCCAAACACAGCCTCTGATATGATCAACATGGCAAAATTATTCGATGAGTGGCGAGCTGCTGTGAATTCTGAGTCAAGAAACTCCAGTGATCAGTCACGGTTGATATTGACAATGGCCATTCGTTATTTGCCTGCTTTCGAATCGTTGAGTTACCCGATTGAATCTATGAAGAGGAACTTGGATTGGGCACATGTTATTGCATATGACTATCATCTGCCTTCTAAGGAGAATGTCACTGGTGCTCATGCTGCTTTATATGACCCGTCAAGCCATGTTAACACCGACTATGGTATAAAGCAATGGCTAAACAACTCATTTCCTGCTAGCAAACTGGTTTTGGGTTTGCCTTACCATGGCTATGCGTGGACACTTGTGCACCCCAAAGACAATAATGGAGTTGGGGCACCTGCAGCCGGCACAGCTGAGACGAAAGACGGATCCATGAGCTATACGTACATCAAGCGGTACATTCGAAGCTACAGAGCTCCCATGGTGTACAATGCTACTTATGTTGTGAACTATTGCATCATAGGGTCGAGTTGGATTGGTTTTGATGATGTGGAAGCTATCAGAACTAAGATTGCATATGTCAAGGAGAAGAAGCTACTTGGTACCAATGTGTTTCAAGTCACCAATGATGACGATTGGGCGCTTTCTCGGGCAGTTCAAGAGGAAGAAAATGATCAAGAAAATAAGCGGCGGTTATTGCTTATAGTTTTGCTTCCAATTACTTTGATCATAATCCTCATAGCCTTCGTGGTGTGTTACGTACAAAGAAAATTGTTGAAGACAAAAGGGATGATTATTTTTGGGAATTCAAGGTCTACTAGTACATCCGATCTTAACAGTGATCCTCCAACTCTGCAAGCATTCAGCTTTTCGAATATCAAAGCGGCAACAAATAACTTCTCAAGTGAAAACAAGCTTGGAGAGGGTGGGTTTGGTCCTGTATACATGGGTAAATTGCGAGGAGGACAGGAAATCGCAGTGAAAAGACTTTCGAAAACGTCAACTCAAGGACTTGAGGAATTTAAAAATGAGGTTACACTTACTGCAAGACTACAACATGTAAATCTAGTTCGAGTTCTTGGATTTTGCACTGAGAAGGAAGAAAAAATGCTGATCTACGAGTACATGCCCAACAAAAGCTTGGACTTCTACCTTTTTGATCCTACCAGACGGTATCTTCTAGACTGGACAAAGCATGTGCACATCATTGAAGGGGTTACCCAAGGACTCCTATATCTTCAAGAATACTCCAATTTTACAATTATTCACCGAGATCTGAAAGGTAGCAACATTTTACTTGACCACGAAATGAATGCTAAGATATCAGATTTTGGAATGGCTAAACTTTTCAGAAAAGATGAACTTGAAGCAAACACAAGCCGGATTGTTGGAACATATGGCTATGTTCCTCCTGAATATGTAAGAAAAGGTATATACTCTACGAAGTATGACGTCTACAGCTTTGGGGTTCTACTTTTACAAATGATTAGTGGAAGGAGGAGCACATGTTACTATGGTCCAAACGAAAGCTTACACCTCTTGCAATATGCATATCTATCATGGAAGGAGGACAAAGGAAGAGAATTTATTGATCCATCACTGGATGATTCTTCTTCTTCTTGTAAATTATCGAGATGCTTGCAAGTAGCTCTATTATGTGTCCAGGAAAATCCGGAGGATAGGCCTACAATGTTGGAAGTTTATTCCATGCTCAAAACTGATACTGAACCCATTCCCACTCCTACAAAGATGGCTTTCTCAGGAAATAGAAGTATGGAAAACATATCTACATCGCAGCAAGGAAGTTGTTCAGTTAATAATGCAGAAATTTCCGAGTTGCAACCCCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Glyco_hydro_18 Pkinase Pkinase_Tyr

Protein Analysis

779

Amino Acids

87.75

Weight (kDa)

8.4

Isoelectric Point (pI)

48.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000775)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g01350 FvH4_1g01363 FvH4_1g01365 FvH4_1g01383 FvH4_1g01390 FvH4_1g01420
malus_domestica	MD02G1011200.v1.1 MD02G1011400.v1.1 MD15G1156200.v1.1 MD15G1156300.v1.1 MD15G1156600.v1.1 MD15G1156700.v1.1 MD15G1156900.v1.1 MD15G1157000.v1.1
prunus_persica	Prupe.7G258600_v2.0.a1 Prupe.7G258700_v2.0.a1 Prupe.7G258700_v2.0.a1 Prupe.7G258800_v2.0.a1 Prupe.7G258900_v2.0.a1
pyrus_communis	pycom02g01010 pycom02g01020 pycom14g14440 pycom15g14020 pycom15g14030 pycom15g14050 pycom15g14060 pycom15g14080
rosa_chinensis	RchiOBHm_Chr2g0086191 RchiOBHm_Chr2g0086211 RchiOBHm_Chr2g0086231 RchiOBHm_Chr2g0086261 RchiOBHm_Chr2g0086281 RchiOBHm_Chr2g0086301 RchiOBHm_Chr2g0086311 RchiOBHm_Chr2g0086321 RchiOBHm_Chr2g0160801 RchiOBHm_Chr6g0247981 RchiOBHm_Chr6g0247991
rosa_laevigata	RLG00000015749
rosa_multiflora	Rmu_co8497771.1_g000001 Rmu_sc0004510.1_g000014 Rmu_sc0004510.1_g000018 Rmu_sc0004948.1_g000005 Rmu_sc0004948.1_g000017 Rmu_sc0004948.1_g000018 Rmu_sc0004948.1_g000024
rosa_roxburghii	Rroxscaffold_2G00154700 Rroxscaffold_2G00154710
rosa_rugosa	Rorug01G0466400 Rorug01G0466500 Rorug05G0529900
rosa_samantha	Rh2AG016200 Rh2AG016300 Rh2AG016500 Rh2AG016700 Rh2BG016300 Rh2BG016400 Rh2BG016500 Rh2CG017200 Rh2CG017300 Rh2CG017400 Rh2CG017500 Rh2CG017600 Rh2DG018200 Rh2DG018300 Rh6AG044800 Rh6BG039800
rosa_wichuraiana	Rw0G015400 Rw2G001400 Rw2G001410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	892
AatII	GACGTC	1 cut(s)	1941
Acc36I	ACCTGC	1 cut(s)	892
Acc65I	GGTACC	1 cut(s)	1088
AccB1I	GGYRCC	2 cut(s)	880, 1088
AccI	GTMKAC	3 cut(s)	1301, 1428, 1941
AccIII	TCCGGA	1 cut(s)	2158
AciI	CCGC	5 cut(s)	90, 940, 1174, 1177, 1370
AclWI	GGATC	7 cut(s)	25, 110, 909, 922, 1322, 1640, 2072
AcoI	YGGCCR	2 cut(s)	476, 591
AcsI	RAATTY	6 cut(s)	199, 541, 1291, 1505, 2069, 2313
AcyI	GRCGYC	1 cut(s)	1938
AfaI	GTAC	8 cut(s)	122, 932, 944, 974, 1090, 1248, 1309, 1610
AfiI	CCNNNNNNNGG	2 cut(s)	830, 890
AflIII	ACRYGT	3 cut(s)	667, 1543, 1991
AgsI	TTSAA	9 cut(s)	423, 638, 1103, 1145, 1264, 1296, 1697, 1727, 1853
AhlI	ACTAGT	1 cut(s)	1304
AjnI	CCWGG	1 cut(s)	2148
AjuI	GAANNNNNNNTTGG	4 cut(s)	638, 670, 1386, 1418
Alw21I	GWGCWC	5 cut(s)	721, 855, 964, 1689, 1991
Alw26I	GTCTC	2 cut(s)	141, 896
Alw44I	GTGCAC	2 cut(s)	851, 1685
AlwI	GGATC	7 cut(s)	25, 110, 909, 922, 1322, 1640, 2072
AlwNI	CAGNNNCTG	1 cut(s)	491
Ama87I	CYCGRG	1 cut(s)	1134
Aor13HI	TCCGGA	1 cut(s)	2158
AoxI	GGCC	3 cut(s)	476, 591, 2168
ApaLI	GTGCAC	2 cut(s)	851, 1685
ApeKI	GCWGC	6 cut(s)	191, 323, 533, 725, 887, 2281
ApoI	RAATTY	6 cut(s)	199, 541, 1291, 1505, 2069, 2313
Asp700I	GAANNNNTTC	2 cut(s)	2217, 2293
Asp718I	GGTACC	1 cut(s)	1088
AspLEI	GCGC	2 cut(s)	276, 1129
AspS9I	GGNCC	2 cut(s)	1421, 2003
AsuHPI	GGTGA	2 cut(s)	1099, 1745
AsuII	TTCGAA	4 cut(s)	615, 949, 1358, 1478
AsuNHI	GCTAGC	1 cut(s)	800
AvaI	CYCGRG	1 cut(s)	1134
AvaII	GGWCC	2 cut(s)	1421, 2003
BaeGI	GKGCMC	4 cut(s)	667, 855, 883, 1689
BaeI	ACNNNNGTAYC	4 cut(s)	112, 145, 1080, 1113
BalI	TGGCCA	2 cut(s)	478, 593
BamHI	GGATCC	1 cut(s)	914
BanI	GGYRCC	2 cut(s)	880, 1088
BanII	GRGCYC	1 cut(s)	964
BbsI	GAAGAC	2 cut(s)	411, 1271
Bbv12I	GWGCWC	5 cut(s)	721, 855, 964, 1689, 1991
BbvI	GCAGC	6 cut(s)	178, 310, 520, 712, 899, 2293
BccI	CCATC	7 cut(s)	230, 250, 260, 292, 314, 2089, 2230
BcgI	CGANNNNNNTGC	4 cut(s)	1781, 1815, 2107, 2141
BciT130I	CCWGG	1 cut(s)	2150
BclI	TGATCA	4 cut(s)	498, 565, 1159, 1212
BcoDI	GTCTC	2 cut(s)	141, 896
BcuI	ACTAGT	1 cut(s)	1304
BfaI	CTAG	4 cut(s)	801, 1305, 1553, 1667
BfmI	CTRYAG	3 cut(s)	885, 955, 1942
BfoI	RGCGCY	1 cut(s)	1130
BfuAI	ACCTGC	1 cut(s)	892
BglII	AGATCT	1 cut(s)	1759
BisI	GCNGC	8 cut(s)	192, 324, 534, 726, 888, 1175, 1371, 2282
BlsI	GCNGC	8 cut(s)	193, 325, 535, 727, 889, 1176, 1372, 2283
Bme1390I	CCNGG	1 cut(s)	2150
Bme18I	GGWCC	2 cut(s)	1421, 2003
BmeT110I	CYCGRG	1 cut(s)	1134
BmgT120I	GGNCC	2 cut(s)	1421, 2003
BmiI	GGNNCC	3 cut(s)	882, 916, 1090
BmrFI	CCNGG	1 cut(s)	2150
BmsI	GCATC	2 cut(s)	1011, 2111
BmtI	GCTAGC	1 cut(s)	804
BpiI	GAAGAC	2 cut(s)	411, 1271
BpmI	CTGGAG	1 cut(s)	544
Bpu14I	TTCGAA	4 cut(s)	615, 949, 1358, 1478
BpuEI	CTTGAG	4 cut(s)	219, 1372, 1476, 1520
BsaAI	YACGTR	2 cut(s)	930, 1246
BsaBI	GATNNNNATC	1 cut(s)	1217
BsaHI	GRCGYC	1 cut(s)	1938
BsaJI	CCNNGG	5 cut(s)	12, 451, 829, 966, 1708
BsaWI	WCCGGW	1 cut(s)	2158
BsaXI	ACNNNNNCTCC	4 cut(s)	203, 233, 1978, 2008
Bsc4I	CCNNNNNNNGG	2 cut(s)	830, 890
Bse118I	RCCGGY	2 cut(s)	125, 890
Bse1I	ACTGG	6 cut(s)	122, 561, 718, 813, 1676, 2091
Bse3DI	GCAATG	1 cut(s)	782
Bse8I	GATNNNNATC	1 cut(s)	1217
BseAI	TCCGGA	1 cut(s)	2158
BseBI	CCWGG	1 cut(s)	2150
BseDI	CCNNGG	5 cut(s)	12, 451, 829, 966, 1708
BseGI	GGATG	5 cut(s)	222, 242, 1281, 1310, 2095
BseJI	GATNNNNATC	1 cut(s)	1217
BseLI	CCNNNNNNNGG	2 cut(s)	830, 890
BseMI	GCAATG	1 cut(s)	782
BseMII	CTCAG	4 cut(s)	537, 891, 1569, 2259
BseNI	ACTGG	6 cut(s)	122, 561, 718, 813, 1676, 2091
BseRI	GAGGAG	2 cut(s)	1461, 1999
BseSI	GKGCMC	4 cut(s)	667, 855, 883, 1689
BseXI	GCAGC	6 cut(s)	178, 310, 520, 712, 899, 2293
BshFI	GGCC	3 cut(s)	478, 593, 2170
BshNI	GGYRCC	2 cut(s)	880, 1088
BsiHKAI	GWGCWC	5 cut(s)	721, 855, 964, 1689, 1991
BsiHKCI	CYCGRG	1 cut(s)	1134
BsiSI	CCGG	4 cut(s)	126, 891, 1867, 2159
BslI	CCNNNNNNNGG	2 cut(s)	830, 890
BsmAI	GTCTC	2 cut(s)	141, 896
BsmBI	CGTCTC	1 cut(s)	896
BsmI	GAATGC	2 cut(s)	1346, 1804
BsnI	GGCC	3 cut(s)	478, 593, 2170
BsoBI	CYCGRG	1 cut(s)	1134
Bsp119I	TTCGAA	4 cut(s)	615, 949, 1358, 1478
Bsp1286I	GDGCHC	7 cut(s)	667, 721, 855, 883, 964, 1689, 1991
Bsp13I	TCCGGA	1 cut(s)	2158
Bsp1407I	TGTACA	1 cut(s)	972
Bsp19I	CCATGG	3 cut(s)	12, 829, 966
BspACI	CCGC	5 cut(s)	90, 940, 1174, 1177, 1370
BspANI	GGCC	3 cut(s)	478, 593, 2170
BspCNI	CTCAG	4 cut(s)	538, 892, 1570, 2258
BspEI	TCCGGA	1 cut(s)	2158
BspLI	GGNNCC	3 cut(s)	882, 916, 1090
BspMAI	CTGCAG	1 cut(s)	889
BspMI	ACCTGC	1 cut(s)	892
BspOI	GCTAGC	1 cut(s)	804
BspPI	GGATC	7 cut(s)	25, 110, 909, 922, 1322, 1640, 2072
BspT104I	TTCGAA	4 cut(s)	615, 949, 1358, 1478
BspT107I	GGYRCC	2 cut(s)	880, 1088
BsrDI	GCAATG	1 cut(s)	782
BsrFI	RCCGGY	2 cut(s)	125, 890
BsrGI	TGTACA	1 cut(s)	972
BsrI	ACTGG	6 cut(s)	122, 561, 718, 813, 1676, 2091
BssAI	RCCGGY	2 cut(s)	125, 890
BssECI	CCNNGG	5 cut(s)	12, 451, 829, 966, 1708
BssNAI	GTATAC	1 cut(s)	1429
BssNI	GRCGYC	1 cut(s)	1938
BssT1I	CCWWGG	5 cut(s)	12, 451, 829, 966, 1708
Bst1107I	GTATAC	1 cut(s)	1429
Bst2UI	CCWGG	1 cut(s)	2150
Bst4CI	ACNGT	3 cut(s)	576, 1325, 1659
Bst6I	CTCTTC	3 cut(s)	50, 641, 2059
BstACI	GRCGYC	1 cut(s)	1938
BstAUI	TGTACA	1 cut(s)	972
BstBAI	YACGTR	2 cut(s)	930, 1246
BstBI	TTCGAA	4 cut(s)	615, 949, 1358, 1478
BstC8I	GCNNGC	6 cut(s)	531, 609, 802, 892, 1344, 2126
BstDEI	CTNAG	7 cut(s)	546, 699, 900, 1053, 1578, 1803, 2245
BstDSI	CCRYGG	3 cut(s)	12, 829, 966
BstEII	GGTNACC	1 cut(s)	1702
BstF5I	GGATG	5 cut(s)	222, 242, 1281, 1310, 2095
BstH2I	RGCGCY	1 cut(s)	1130
BstHHI	GCGC	2 cut(s)	276, 1129
BstMAI	GTCTC	2 cut(s)	141, 896
BstMWI	GCNNNNNNNGC	6 cut(s)	191, 329, 725, 887, 896, 1183
BstNI	CCWGG	1 cut(s)	2150
BstNSI	RCATGY	5 cut(s)	671, 1547, 1615, 1685, 1995
BstPI	GGTNACC	1 cut(s)	1702
BstSCI	CCNGG	1 cut(s)	2148
BstSFI	CTRYAG	3 cut(s)	885, 955, 1942
BstSLI	GKGCMC	4 cut(s)	667, 855, 883, 1689
BstSNI	TACGTA	2 cut(s)	930, 1246
BstV1I	GCAGC	6 cut(s)	178, 310, 520, 712, 899, 2293
BstV2I	GAAGAC	2 cut(s)	411, 1271
BstX2I	RGATCY	2 cut(s)	914, 1759
BstXI	CCANNNNNNTGG	1 cut(s)	13
BstYI	RGATCY	2 cut(s)	914, 1759
BstZ17I	GTATAC	1 cut(s)	1429
BsuRI	GGCC	3 cut(s)	478, 593, 2170
BtgI	CCRYGG	3 cut(s)	12, 829, 966
BtgZI	GCGATG	1 cut(s)	2262
BtsCI	GGATG	5 cut(s)	222, 242, 1281, 1310, 2095
BtsI	GCAGTG	1 cut(s)	1470
BtsIMutI	CAGTG	6 cut(s)	568, 711, 1330, 1470, 1575, 2084
BveI	ACCTGC	1 cut(s)	892
Cac8I	GCNNGC	6 cut(s)	531, 609, 802, 892, 1344, 2126
CaiI	CAGNNNCTG	1 cut(s)	491
CfoI	GCGC	2 cut(s)	276, 1129
Cfr10I	RCCGGY	2 cut(s)	125, 890
Cfr13I	GGNCC	2 cut(s)	1421, 2003
Csp6I	GTAC	8 cut(s)	121, 931, 943, 973, 1089, 1247, 1308, 1609
CviQI	GTAC	8 cut(s)	121, 931, 943, 973, 1089, 1247, 1308, 1609
DdeI	CTNAG	7 cut(s)	546, 699, 900, 1053, 1578, 1803, 2245
DraI	TTTAAA	1 cut(s)	1510
EaeI	YGGCCR	2 cut(s)	476, 591
Eam1104I	CTCTTC	3 cut(s)	50, 641, 2059
EarI	CTCTTC	3 cut(s)	50, 641, 2059
Ecl136II	GAGCTC	1 cut(s)	962
Eco105I	TACGTA	2 cut(s)	930, 1246
Eco130I	CCWWGG	5 cut(s)	12, 451, 829, 966, 1708
Eco147I	AGGCCT	1 cut(s)	2170
Eco24I	GRGCYC	1 cut(s)	964
Eco32I	GATATC	1 cut(s)	1809
Eco47I	GGWCC	2 cut(s)	1421, 2003
Eco53kI	GAGCTC	1 cut(s)	962
Eco88I	CYCGRG	1 cut(s)	1134
Eco91I	GGTNACC	1 cut(s)	1702
EcoICRI	GAGCTC	1 cut(s)	962
EcoO65I	GGTNACC	1 cut(s)	1702
EcoRI	GAATTC	3 cut(s)	199, 541, 1291
EcoRII	CCWGG	1 cut(s)	2148
EcoRV	GATATC	1 cut(s)	1809
EcoT14I	CCWWGG	5 cut(s)	12, 451, 829, 966, 1708
EcoT22I	ATGCAT	1 cut(s)	2038
EcoT38I	GRGCYC	1 cut(s)	964
ErhI	CCWWGG	5 cut(s)	12, 451, 829, 966, 1708
Esp3I	CGTCTC	1 cut(s)	896
FalI	AAGNNNNNCTT	4 cut(s)	638, 670, 1833, 1865
FauNDI	CATATG	3 cut(s)	679, 1063, 1882
FbaI	TGATCA	4 cut(s)	498, 565, 1159, 1212
FblI	GTMKAC	3 cut(s)	1301, 1428, 1941
Fnu4HI	GCNGC	8 cut(s)	192, 324, 534, 726, 888, 1175, 1371, 2282
FokI	GGATG	5 cut(s)	209, 229, 1288, 1297, 2102
FriOI	GRGCYC	1 cut(s)	964
Fsp4HI	GCNGC	8 cut(s)	192, 324, 534, 726, 888, 1175, 1371, 2282
FspBI	CTAG	4 cut(s)	801, 1305, 1553, 1667
GlaI	GCGC	2 cut(s)	275, 1128
GluI	GCNGC	8 cut(s)	192, 324, 534, 726, 888, 1175, 1371, 2282
GsuI	CTGGAG	1 cut(s)	544
HaeII	RGCGCY	1 cut(s)	1130
HaeIII	GGCC	3 cut(s)	478, 593, 2170
HapII	CCGG	4 cut(s)	126, 891, 1867, 2159
HhaI	GCGC	2 cut(s)	276, 1129
Hin1I	GRCGYC	1 cut(s)	1938
Hin6I	GCGC	2 cut(s)	274, 1127
HinP1I	GCGC	2 cut(s)	274, 1127
HincII	GTYRAC	4 cut(s)	358, 385, 754, 1488
HindII	GTYRAC	4 cut(s)	358, 385, 754, 1488
HindIII	AAGCTT	3 cut(s)	1400, 1624, 2014
HinfI	GANTC	7 cut(s)	134, 416, 548, 617, 638, 1713, 2093
HpaI	GTTAAC	2 cut(s)	358, 754
HpaII	CCGG	4 cut(s)	126, 891, 1867, 2159
HphI	GGTGA	2 cut(s)	1099, 1745
HpyAV	CCTTC	8 cut(s)	256, 402, 705, 1240, 1576, 1691, 1974, 2044
HpyCH4III	ACNGT	3 cut(s)	576, 1325, 1659
HpyCH4IV	ACGT	4 cut(s)	929, 1245, 1484, 1938
HpyF10VI	GCNNNNNNNGC	6 cut(s)	191, 329, 725, 887, 896, 1183
HpyF3I	CTNAG	7 cut(s)	546, 699, 900, 1053, 1578, 1803, 2245
HpySE526I	ACGT	4 cut(s)	929, 1245, 1484, 1938
Hsp92I	GRCGYC	1 cut(s)	1938
HspAI	GCGC	2 cut(s)	274, 1127
Kpn2I	TCCGGA	1 cut(s)	2158
KpnI	GGTACC	1 cut(s)	1092
KroI	GCCGGC	1 cut(s)	890
KroNI	GCCGGC	1 cut(s)	892
Ksp22I	TGATCA	4 cut(s)	498, 565, 1159, 1212
KspAI	GTTAAC	2 cut(s)	358, 754
LmnI	GCTCC	2 cut(s)	967, 1986
Lsp1109I	GCAGC	6 cut(s)	178, 310, 520, 712, 899, 2293
LweI	GCATC	2 cut(s)	1011, 2111
MaeI	CTAG	4 cut(s)	801, 1305, 1553, 1667
MaeII	ACGT	4 cut(s)	929, 1245, 1484, 1938
MaeIII	GTNAC	9 cut(s)	113, 570, 626, 709, 1105, 1241, 1519, 1702, 1994
MflI	RGATCY	2 cut(s)	914, 1759
MhlI	GDGCHC	7 cut(s)	667, 721, 855, 883, 964, 1689, 1991
MlsI	TGGCCA	2 cut(s)	478, 593
MluNI	TGGCCA	2 cut(s)	478, 593
MlyI	GAGTC	4 cut(s)	143, 425, 557, 1707
MmeI	TCCRAC	4 cut(s)	998, 1358, 1855, 2160
Mox20I	TGGCCA	2 cut(s)	478, 593
Mph1103I	ATGCAT	1 cut(s)	2038
MroI	TCCGGA	1 cut(s)	2158
MroNI	GCCGGC	1 cut(s)	890
MroXI	GAANNNNTTC	2 cut(s)	2217, 2293
MscI	TGGCCA	2 cut(s)	478, 593
MseI	TTAA	5 cut(s)	357, 753, 1320, 1509, 2301
MslI	CAYNNNNRTG	2 cut(s)	11, 834
Msp20I	TGGCCA	2 cut(s)	478, 593
MspA1I	CMGCKG	1 cut(s)	899
MspI	CCGG	4 cut(s)	126, 891, 1867, 2159
MspR9I	CCNGG	1 cut(s)	2150
Mva1269I	GAATGC	2 cut(s)	1346, 1804
MvaI	CCWGG	1 cut(s)	2150
MwoI	GCNNNNNNNGC	6 cut(s)	191, 329, 725, 887, 896, 1183
NaeI	GCCGGC	1 cut(s)	892
NcoI	CCATGG	3 cut(s)	12, 829, 966
NdeI	CATATG	3 cut(s)	679, 1063, 1882
NgoMIV	GCCGGC	1 cut(s)	890
NheI	GCTAGC	1 cut(s)	800
NlaIV	GGNNCC	3 cut(s)	882, 916, 1090
NmuCI	GTSAC	3 cut(s)	570, 709, 1105
NsiI	ATGCAT	1 cut(s)	2038
NspI	RCATGY	5 cut(s)	671, 1547, 1615, 1685, 1995
NspV	TTCGAA	4 cut(s)	615, 949, 1358, 1478
PaqCI	CACCTGC	1 cut(s)	892
PceI	AGGCCT	1 cut(s)	2170
PciI	ACATGT	3 cut(s)	667, 1543, 1991
PcsI	WCGNNNNNNNCGW	1 cut(s)	129
PctI	GAATGC	2 cut(s)	1346, 1804
PdiI	GCCGGC	1 cut(s)	892
PdmI	GAANNNNTTC	2 cut(s)	2217, 2293
PfeI	GAWTC	3 cut(s)	617, 638, 2093
PfoI	TCCNGGA	1 cut(s)	2148
PkrI	GCNGC	8 cut(s)	193, 325, 535, 727, 889, 1176, 1372, 2283
PleI	GAGTC	4 cut(s)	142, 424, 556, 1707
PpsI	GAGTC	4 cut(s)	142, 424, 556, 1707
Ppu21I	YACGTR	2 cut(s)	930, 1246
PscI	ACATGT	3 cut(s)	667, 1543, 1991
Psp124BI	GAGCTC	1 cut(s)	964
Psp6I	CCWGG	1 cut(s)	2148
PspEI	GGTNACC	1 cut(s)	1702
PspGI	CCWGG	1 cut(s)	2148
PspN4I	GGNNCC	3 cut(s)	882, 916, 1090
PspPI	GGNCC	2 cut(s)	1421, 2003
PsrI	GAACNNNNNNTAC	2 cut(s)	1539, 1571
PstI	CTGCAG	1 cut(s)	889
PstNI	CAGNNNCTG	1 cut(s)	491
PsuI	RGATCY	2 cut(s)	914, 1759
PvuII	CAGCTG	1 cut(s)	899
RsaI	GTAC	8 cut(s)	122, 932, 944, 974, 1090, 1248, 1309, 1610
RsaNI	GTAC	8 cut(s)	121, 931, 943, 973, 1089, 1247, 1308, 1609
RseI	CAYNNNNRTG	2 cut(s)	11, 834
SacI	GAGCTC	1 cut(s)	964
SaqAI	TTAA	5 cut(s)	357, 753, 1320, 1509, 2301
SatI	GCNGC	8 cut(s)	192, 324, 534, 726, 888, 1175, 1371, 2282
Sau96I	GGNCC	2 cut(s)	1421, 2003
SchI	GAGTC	4 cut(s)	143, 425, 557, 1707
ScrFI	CCNGG	1 cut(s)	2150
SduI	GDGCHC	7 cut(s)	667, 721, 855, 883, 964, 1689, 1991
SfaNI	GCATC	2 cut(s)	1011, 2111
SfcI	CTRYAG	3 cut(s)	885, 955, 1942
SfuI	TTCGAA	4 cut(s)	615, 949, 1358, 1478
SinI	GGWCC	2 cut(s)	1421, 2003
SmiMI	CAYNNNNRTG	2 cut(s)	11, 834
SmlI	CTYRAG	4 cut(s)	234, 1387, 1491, 1499
SmoI	CTYRAG	4 cut(s)	234, 1387, 1491, 1499
SnaBI	TACGTA	2 cut(s)	930, 1246
SpeI	ACTAGT	1 cut(s)	1304
SseBI	AGGCCT	1 cut(s)	2170
SsiI	CCGC	5 cut(s)	90, 940, 1174, 1177, 1370
SspMI	CTAG	4 cut(s)	801, 1305, 1553, 1667
SstI	GAGCTC	1 cut(s)	964
StuI	AGGCCT	1 cut(s)	2170
StyD4I	CCNGG	1 cut(s)	2148
StyI	CCWWGG	5 cut(s)	12, 451, 829, 966, 1708
TaaI	ACNGT	3 cut(s)	576, 1325, 1659
TaiI	ACGT	4 cut(s)	932, 1248, 1487, 1941
TaqI	TCGA	8 cut(s)	519, 615, 949, 1013, 1358, 1478, 1558, 2117
TatI	WGTACW	3 cut(s)	972, 1307, 1608
TauI	GCSGC	2 cut(s)	1177, 1373
TfiI	GAWTC	3 cut(s)	617, 638, 2093
Tru1I	TTAA	5 cut(s)	357, 753, 1320, 1509, 2301
Tru9I	TTAA	5 cut(s)	357, 753, 1320, 1509, 2301
TscAI	CASTG	6 cut(s)	568, 718, 1330, 1470, 1582, 2091
TseFI	GTSAC	3 cut(s)	570, 709, 1105
TseI	GCWGC	6 cut(s)	191, 323, 533, 725, 887, 2281
Tsp45I	GTSAC	3 cut(s)	570, 709, 1105
TspDTI	ATGAA	6 cut(s)	37, 54, 400, 659, 1811, 1860
TspGWI	ACGGA	1 cut(s)	927
TspRI	CASTG	6 cut(s)	568, 718, 1330, 1470, 1582, 2091
VneI	GTGCAC	2 cut(s)	851, 1685
VpaK11BI	GGWCC	2 cut(s)	1421, 2003
XapI	RAATTY	6 cut(s)	199, 541, 1291, 1505, 2069, 2313
XbaI	TCTAGA	1 cut(s)	1666
XceI	RCATGY	5 cut(s)	671, 1547, 1615, 1685, 1995
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1624
XmiI	GTMKAC	3 cut(s)	1301, 1428, 1941
XmnI	GAANNNNTTC	2 cut(s)	2217, 2293
XspI	CTAG	4 cut(s)	801, 1305, 1553, 1667
ZraI	GACGTC	1 cut(s)	1939
Zsp2I	ATGCAT	1 cut(s)	2038

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.