Rh2CG017300

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
1357356 .. 1360421
3066 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG017300.1

Sequence Viewer

Length: 1641 bp
ATGTTGTTGAAAATGCAATACCATTTATCAATAGCTACCAAATTTCTCCTCCTCTTTCTCTTTTCTACGAACTTGAATTGTTCAAACACGCAGTCATGGATCGAAGCCGGTTACCATTACACAGGTATTGAATTCCCCGTCTCTGACATAGATTCCACATTGTTCACTCACCTTATATGTGGTTTTGCCCATATAAACTCTTCCACTTACCAGCTCTCATTCAACTCCTCCACCCAACAAGAATTCTCCACTTTCACAAATGTTGTCAAGCGCAAAAACCCAAAAGTCACAACCTTGCTATCCATCCGGGGTGGACGAAAAGACTATTCAGTGTTGTTTTCATTGCTGAACCAGTCTTCTCACCGGAGATCTTTCATTGAATCTTCAATAACGACAGCTAGACTTTATGAGTTTGATGGGCTAGACCTTACAGGGGCTGTACCAAGAACAAGCATGCATACCACATCTTTGGGAACATTTCTATATGAGTGGCGTGCTGCGGTGGATTCTGAAGCAAAAAAATCAGGAAAGTCAGGTTTGCTCTTGACAATGGCGCTTTATGATCATATGCAGGTTATGGACACCATGACTTATCCGATTGACTCAATTAAGAAGAACTTGAATTGGGTTCATCTTGTGGCATATGATTACTATCTTCCGAAAGAGGAAAACTTCACACACCCTCATGCTGCTTTATATGACCCAATATCAAATGGGACTAACACGAATAGCCGTGTTAAGGACTTGATAAGCAGAGGACTACCGGCTAGCAAGCTGGTTTTAGGCCTGCCTTACCATGGTTATGGTTGGGCTCTTGTGAATCCCAACGACTATAATGTTGGTGCAGCGGCATCAGGTCCTGCGGTTACCATAGACGGGTCCATGGCCTATAAGTACATCAAATGGTTCATTAAGACATATGGATATGGTGCAGTTCCTATGTACAATGACACTTATGTGGTGAATTACTGCACAATTGGGTCAAGGTGGATTGATTTTGATGATGTAGAGGCTATCAGCGCGAAAGTTTCTTATGCTAAGAAGATGGGGCTTCTTGGCTACAGTGTGTTTCAAGTTGGCAATGATGACAATTGGGTTCTCTCTAGGGCAGCAGCTCAAAAGGAAGGAGGTCAACAGAACAAGAAACGGTTAGTGGGGATTGTTCTGGTCACAATTGCTATGATTATCCTACTGGGAACAATGATGTGTTACCTACAGAGGAGAGTACTCAAGTCAATTGGGATTATAGACTACATAAAAAGATCAGTTTATAGGCTATTAAATATAGTTCCAGGTACAGACAGTCTTGACGGCAATGCTCCTAATCTACAAGCATATGAGTTGTGGAGAGAAGGCCAAGGCATGGATTTCATAGATCCAACCCTTGATGATTCGACTTCGTCTTGCAAGCTCTTAAGATGCATGGTGGTAGCCTTATTATGTGTCCAAGAAAATCCAGAAGATAGACCATCCATGCTGGAGGTTTGTTCAATGCTCAAGAGTGAAATTGCAGCCATCATTAGTCCTAAAAAGCCTGCTTTCTCGGTTAAGAAGGATGAAGATGAGGATCATATATACAAATTCAGGGAAGAAATCTATTCAGTCAATGATGCAACAATGTCTGAAATTGTGCCCCGATGA

Protein Analysis

546

Amino Acids

61.41

Weight (kDa)

7.17

Isoelectric Point (pI)

39.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_18 PF00704 47 - 362 2.3e-54 Glycosyl hydrolases family 18
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 562
AccB7I CCANNNNNTGG 1 cut(s) 1363
AccII CGCG 1 cut(s) 1022
AciI CCGC 3 cut(s) 500, 848, 863
AclWI GGATC 3 cut(s) 107, 1370, 1575
AcsI RAATTY 4 cut(s) 41, 131, 242, 1580
AcuI CTGAAG 1 cut(s) 531
AfaI GTAC 5 cut(s) 441, 896, 944, 1227, 1297
AfiI CCNNNNNNNGG 5 cut(s) 433, 739, 797, 876, 1363
AflII CTTAAG 1 cut(s) 1414
AjnI CCWGG 1 cut(s) 1291
AleI CACNNNNGTG 1 cut(s) 956
AluBI AGCT 6 cut(s) 35, 214, 398, 775, 1115, 1411
AluI AGCT 6 cut(s) 35, 214, 398, 775, 1115, 1411
Alw26I GTCTC 1 cut(s) 145
AlwI GGATC 3 cut(s) 107, 1370, 1575
AlwNI CAGNNNCTG 2 cut(s) 437, 860
AoxI GGCC 3 cut(s) 784, 885, 1354
ApeKI GCWGC 6 cut(s) 497, 689, 845, 1109, 1112, 1511
ApoI RAATTY 4 cut(s) 41, 131, 242, 1580
ArsI GACNNNNNNTTYG 2 cut(s) 77, 109
AspLEI GCGC 3 cut(s) 273, 556, 1022
AspS9I GGNCC 2 cut(s) 857, 879
AsuC2I CCSGG 1 cut(s) 308
AsuHPI GGTGA 3 cut(s) 161, 353, 973
AsuNHI GCTAGC 1 cut(s) 767
AvaII GGWCC 2 cut(s) 857, 879
BaeGI GKGCMC 1 cut(s) 1635
BanII GRGCYC 1 cut(s) 814
BbsI GAAGAC 1 cut(s) 348
BbvI GCAGC 6 cut(s) 484, 676, 857, 1121, 1124, 1523
BccI CCATC 5 cut(s) 311, 410, 1039, 1477, 1523
BceAI ACGGC 2 cut(s) 717, 1327
BciT130I CCWGG 1 cut(s) 1293
BclI TGATCA 1 cut(s) 562
BcnI CCSGG 1 cut(s) 308
BcoDI GTCTC 1 cut(s) 145
BfaI CTAG 4 cut(s) 399, 422, 768, 1104
BfmI CTRYAG 2 cut(s) 1060, 1214
BfoI RGCGCY 1 cut(s) 557
BfrI CTTAAG 1 cut(s) 1414
BfuAI ACCTGC 1 cut(s) 562
BglII AGATCT 1 cut(s) 368
BisI GCNGC 7 cut(s) 498, 690, 846, 849, 1110, 1113, 1512
BlsI GCNGC 7 cut(s) 499, 691, 847, 850, 1111, 1114, 1513
BmcAI AGTACT 1 cut(s) 1227
Bme1390I CCNGG 2 cut(s) 308, 1293
Bme18I GGWCC 2 cut(s) 857, 879
BmgT120I GGNCC 2 cut(s) 857, 879
BmiI GGNNCC 1 cut(s) 880
BmrFI CCNGG 2 cut(s) 308, 1293
BmrI ACTGGG 1 cut(s) 1202
BmsI GCATC 3 cut(s) 860, 1409, 1600
BmtI GCTAGC 1 cut(s) 771
BmuI ACTGGG 1 cut(s) 1202
BpiI GAAGAC 1 cut(s) 348
BpmI CTGGAG 1 cut(s) 1499
BpuEI CTTGAG 2 cut(s) 1214, 1481
BpuMI CCSGG 1 cut(s) 308
BsaBI GATNNNNATC 2 cut(s) 651, 1566
BsaJI CCNNGG 4 cut(s) 307, 796, 882, 1357
BsaWI WCCGGW 1 cut(s) 363
Bsc4I CCNNNNNNNGG 5 cut(s) 433, 739, 797, 876, 1363
Bse118I RCCGGY 2 cut(s) 107, 763
Bse1I ACTGG 2 cut(s) 352, 1197
Bse3DI GCAATG 3 cut(s) 341, 1087, 1321
Bse8I GATNNNNATC 2 cut(s) 651, 1566
BseBI CCWGG 1 cut(s) 1293
BseDI CCNNGG 4 cut(s) 307, 796, 882, 1357
BseGI GGATG 3 cut(s) 303, 1469, 1561
BseJI GATNNNNATC 2 cut(s) 651, 1566
BseLI CCNNNNNNNGG 5 cut(s) 433, 739, 797, 876, 1363
BseMI GCAATG 3 cut(s) 341, 1087, 1321
BseNI ACTGG 2 cut(s) 352, 1197
BseRI GAGGAG 4 cut(s) 38, 41, 217, 1234
BseSI GKGCMC 1 cut(s) 1635
BseXI GCAGC 6 cut(s) 484, 676, 857, 1121, 1124, 1523
BsgI GTGCAG 3 cut(s) 864, 951, 955
Bsh1236I CGCG 1 cut(s) 1022
BshFI GGCC 3 cut(s) 786, 887, 1356
BsiSI CCGG 4 cut(s) 108, 307, 364, 764
BslFI GGGAC 1 cut(s) 730
BslI CCNNNNNNNGG 5 cut(s) 433, 739, 797, 876, 1363
BsmAI GTCTC 1 cut(s) 145
BsmBI CGTCTC 1 cut(s) 145
BsmFI GGGAC 1 cut(s) 730
BsnI GGCC 3 cut(s) 786, 887, 1356
Bsp1286I GDGCHC 2 cut(s) 814, 1635
Bsp1407I TGTACA 1 cut(s) 942
Bsp143I GATC 6 cut(s) 99, 368, 562, 1262, 1375, 1567
Bsp19I CCATGG 2 cut(s) 796, 882
BspACI CCGC 3 cut(s) 500, 848, 863
BspANI GGCC 3 cut(s) 786, 887, 1356
BspFNI CGCG 1 cut(s) 1022
BspLI GGNNCC 1 cut(s) 880
BspMI ACCTGC 1 cut(s) 562
BspOI GCTAGC 1 cut(s) 771
BspPI GGATC 3 cut(s) 107, 1370, 1575
BspTI CTTAAG 1 cut(s) 1414
BsrDI GCAATG 3 cut(s) 341, 1087, 1321
BsrFI RCCGGY 2 cut(s) 107, 763
BsrGI TGTACA 1 cut(s) 942
BsrI ACTGG 2 cut(s) 352, 1197
BssAI RCCGGY 2 cut(s) 107, 763
BssECI CCNNGG 4 cut(s) 307, 796, 882, 1357
BssMI GATC 6 cut(s) 99, 368, 562, 1262, 1375, 1567
BssT1I CCWWGG 3 cut(s) 796, 882, 1357
Bst2UI CCWGG 1 cut(s) 1293
Bst4CI ACNGT 3 cut(s) 1064, 1149, 1304
Bst6I CTCTTC 1 cut(s) 205
BstAFI CTTAAG 1 cut(s) 1414
BstAUI TGTACA 1 cut(s) 942
BstC8I GCNNGC 7 cut(s) 455, 495, 769, 773, 788, 1409, 1536
BstDEI CTNAG 1 cut(s) 1038
BstDSI CCRYGG 2 cut(s) 796, 882
BstEII GGTNACC 2 cut(s) 110, 865
BstF5I GGATG 3 cut(s) 303, 1469, 1561
BstFNI CGCG 1 cut(s) 1022
BstH2I RGCGCY 1 cut(s) 557
BstHHI GCGC 3 cut(s) 273, 556, 1022
BstKTI GATC 6 cut(s) 102, 371, 565, 1265, 1378, 1570
BstMAI GTCTC 1 cut(s) 145
BstMBI GATC 6 cut(s) 99, 368, 562, 1262, 1375, 1567
BstMWI GCNNNNNNNGC 1 cut(s) 1019
BstNI CCWGG 1 cut(s) 1293
BstNSI RCATGY 1 cut(s) 457
BstPI GGTNACC 2 cut(s) 110, 865
BstSCI CCNGG 2 cut(s) 306, 1291
BstSFI CTRYAG 2 cut(s) 1060, 1214
BstSLI GKGCMC 1 cut(s) 1635
BstUI CGCG 1 cut(s) 1022
BstV1I GCAGC 6 cut(s) 484, 676, 857, 1121, 1124, 1523
BstV2I GAAGAC 1 cut(s) 348
BstX2I RGATCY 2 cut(s) 368, 1375
BstXI CCANNNNNNTGG 2 cut(s) 469, 803
BstYI RGATCY 2 cut(s) 368, 1375
BsuRI GGCC 3 cut(s) 786, 887, 1356
BtgI CCRYGG 2 cut(s) 796, 882
BtsCI GGATG 3 cut(s) 303, 1469, 1561
BtsIMutI CAGTG 2 cut(s) 336, 1069
BveI ACCTGC 1 cut(s) 562
Cac8I GCNNGC 7 cut(s) 455, 495, 769, 773, 788, 1409, 1536
CaiI CAGNNNCTG 2 cut(s) 437, 860
CfoI GCGC 3 cut(s) 273, 556, 1022
Cfr10I RCCGGY 2 cut(s) 107, 763
Cfr13I GGNCC 2 cut(s) 857, 879
Csp6I GTAC 5 cut(s) 440, 895, 943, 1226, 1296
CviAII CATG 9 cut(s) 96, 454, 586, 686, 797, 883, 1363, 1423, 1474
CviQI GTAC 5 cut(s) 440, 895, 943, 1226, 1296
DdeI CTNAG 1 cut(s) 1038
DpnI GATC 6 cut(s) 101, 370, 564, 1264, 1377, 1569
DpnII GATC 6 cut(s) 99, 368, 562, 1262, 1375, 1567
Eam1104I CTCTTC 1 cut(s) 205
EarI CTCTTC 1 cut(s) 205
Eco130I CCWWGG 3 cut(s) 796, 882, 1357
Eco147I AGGCCT 1 cut(s) 786
Eco24I GRGCYC 1 cut(s) 814
Eco47I GGWCC 2 cut(s) 857, 879
Eco57I CTGAAG 1 cut(s) 531
Eco91I GGTNACC 2 cut(s) 110, 865
EcoO109I RGGNCCY 1 cut(s) 857
EcoO65I GGTNACC 2 cut(s) 110, 865
EcoRI GAATTC 2 cut(s) 131, 242
EcoRII CCWGG 1 cut(s) 1291
EcoT14I CCWWGG 3 cut(s) 796, 882, 1357
EcoT22I ATGCAT 2 cut(s) 459, 1424
EcoT38I GRGCYC 1 cut(s) 814
ErhI CCWWGG 3 cut(s) 796, 882, 1357
Esp3I CGTCTC 1 cut(s) 145
FaeI CATG 9 cut(s) 99, 457, 589, 689, 800, 886, 1366, 1426, 1477
FalI AAGNNNNNCTT 2 cut(s) 602, 634
FaqI GGGAC 1 cut(s) 730
FatI CATG 9 cut(s) 95, 453, 585, 685, 796, 882, 1362, 1422, 1473
FauNDI CATATG 4 cut(s) 567, 643, 919, 1336
FbaI TGATCA 1 cut(s) 562
Fnu4HI GCNGC 7 cut(s) 498, 690, 846, 849, 1110, 1113, 1512
FokI GGATG 3 cut(s) 290, 1456, 1568
FriOI GRGCYC 1 cut(s) 814
Fsp4HI GCNGC 7 cut(s) 498, 690, 846, 849, 1110, 1113, 1512
FspBI CTAG 4 cut(s) 399, 422, 768, 1104
GlaI GCGC 3 cut(s) 272, 555, 1021
GluI GCNGC 7 cut(s) 498, 690, 846, 849, 1110, 1113, 1512
GsuI CTGGAG 1 cut(s) 1499
HaeII RGCGCY 1 cut(s) 557
HaeIII GGCC 3 cut(s) 786, 887, 1356
HapII CCGG 4 cut(s) 108, 307, 364, 764
HhaI GCGC 3 cut(s) 273, 556, 1022
Hin1II CATG 9 cut(s) 99, 457, 589, 689, 800, 886, 1366, 1426, 1477
Hin6I GCGC 3 cut(s) 271, 554, 1020
HinP1I GCGC 3 cut(s) 271, 554, 1020
HincII GTYRAC 1 cut(s) 1133
HindII GTYRAC 1 cut(s) 1133
HinfI GANTC 6 cut(s) 152, 380, 506, 602, 820, 1391
HpaII CCGG 4 cut(s) 108, 307, 364, 764
HphI GGTGA 3 cut(s) 161, 353, 973
Hpy166II GTNNAC 3 cut(s) 165, 314, 1133
Hpy188I TCNGA 5 cut(s) 145, 511, 597, 660, 1624
Hpy188III TCNNGA 5 cut(s) 525, 544, 1307, 1457, 1498
Hpy8I GTNNAC 3 cut(s) 165, 314, 1133
HpyAV CCTTC 3 cut(s) 1118, 1346, 1546
HpyCH4III ACNGT 3 cut(s) 1064, 1149, 1304
HpyF10VI GCNNNNNNNGC 1 cut(s) 1019
HpyF3I CTNAG 1 cut(s) 1038
Hsp92II CATG 9 cut(s) 99, 457, 589, 689, 800, 886, 1366, 1426, 1477
HspAI GCGC 3 cut(s) 271, 554, 1020
Ksp22I TGATCA 1 cut(s) 562
Kzo9I GATC 6 cut(s) 99, 368, 562, 1262, 1375, 1567
LmnI GCTCC 1 cut(s) 1324
Lsp1109I GCAGC 6 cut(s) 484, 676, 857, 1121, 1124, 1523
LweI GCATC 3 cut(s) 860, 1409, 1600
MaeI CTAG 4 cut(s) 399, 422, 768, 1104
MaeIII GTNAC 5 cut(s) 110, 286, 865, 1168, 1208
MalI GATC 6 cut(s) 101, 370, 564, 1264, 1377, 1569
MboI GATC 6 cut(s) 99, 368, 562, 1262, 1375, 1567
MboII GAAGA 9 cut(s) 192, 348, 375, 625, 647, 1054, 1472, 1571, 1601
MfeI CAATTG 4 cut(s) 975, 1090, 1173, 1236
MflI RGATCY 2 cut(s) 368, 1375
MhlI GDGCHC 2 cut(s) 814, 1635
MlyI GAGTC 1 cut(s) 596
MmeI TCCRAC 1 cut(s) 1403
Mph1103I ATGCAT 2 cut(s) 459, 1424
MseI TTAA 6 cut(s) 609, 738, 912, 1280, 1415, 1548
MslI CAYNNNNRTG 3 cut(s) 684, 801, 956
MspA1I CMGCKG 1 cut(s) 848
MspCI CTTAAG 1 cut(s) 1414
MspI CCGG 4 cut(s) 108, 307, 364, 764
MspR9I CCNGG 2 cut(s) 308, 1293
MunI CAATTG 4 cut(s) 975, 1090, 1173, 1236
MvaI CCWGG 1 cut(s) 1293
MvnI CGCG 1 cut(s) 1022
MwoI GCNNNNNNNGC 1 cut(s) 1019
NciI CCSGG 1 cut(s) 308
NcoI CCATGG 2 cut(s) 796, 882
NdeI CATATG 4 cut(s) 567, 643, 919, 1336
NdeII GATC 6 cut(s) 99, 368, 562, 1262, 1375, 1567
NheI GCTAGC 1 cut(s) 767
NlaIII CATG 9 cut(s) 99, 457, 589, 689, 800, 886, 1366, 1426, 1477
NlaIV GGNNCC 1 cut(s) 880
NmuCI GTSAC 2 cut(s) 286, 1168
NsiI ATGCAT 2 cut(s) 459, 1424
NspI RCATGY 1 cut(s) 457
OliI CACNNNNGTG 1 cut(s) 956
PaeI GCATGC 1 cut(s) 457
PceI AGGCCT 1 cut(s) 786
PfeI GAWTC 5 cut(s) 152, 380, 506, 820, 1391
PflFI GACNNNGTC 1 cut(s) 1399
PflMI CCANNNNNTGG 1 cut(s) 1363
PkrI GCNGC 7 cut(s) 499, 691, 847, 850, 1111, 1114, 1513
PleI GAGTC 1 cut(s) 596
PpsI GAGTC 1 cut(s) 596
PpuMI RGGWCCY 1 cut(s) 857
Psp5II RGGWCCY 1 cut(s) 857
Psp6I CCWGG 1 cut(s) 1291
PspEI GGTNACC 2 cut(s) 110, 865
PspGI CCWGG 1 cut(s) 1291
PspN4I GGNNCC 1 cut(s) 880
PspPI GGNCC 2 cut(s) 857, 879
PspPPI RGGWCCY 1 cut(s) 857
PstNI CAGNNNCTG 2 cut(s) 437, 860
PsuI RGATCY 2 cut(s) 368, 1375
PsyI GACNNNGTC 1 cut(s) 1399
RsaI GTAC 5 cut(s) 441, 896, 944, 1227, 1297
RsaNI GTAC 5 cut(s) 440, 895, 943, 1226, 1296
RseI CAYNNNNRTG 3 cut(s) 684, 801, 956
SaqAI TTAA 6 cut(s) 609, 738, 912, 1280, 1415, 1548
SatI GCNGC 7 cut(s) 498, 690, 846, 849, 1110, 1113, 1512
Sau3AI GATC 6 cut(s) 99, 368, 562, 1262, 1375, 1567
Sau96I GGNCC 2 cut(s) 857, 879
ScaI AGTACT 1 cut(s) 1227
SchI GAGTC 1 cut(s) 596
ScrFI CCNGG 2 cut(s) 308, 1293
SduI GDGCHC 2 cut(s) 814, 1635
SfaNI GCATC 3 cut(s) 860, 1409, 1600
SfcI CTRYAG 2 cut(s) 1060, 1214
SinI GGWCC 2 cut(s) 857, 879
SmiMI CAYNNNNRTG 3 cut(s) 684, 801, 956
SmlI CTYRAG 3 cut(s) 1229, 1414, 1496
SmoI CTYRAG 3 cut(s) 1229, 1414, 1496
SphI GCATGC 1 cut(s) 457
SseBI AGGCCT 1 cut(s) 786
SsiI CCGC 3 cut(s) 500, 848, 863
SspMI CTAG 4 cut(s) 399, 422, 768, 1104
StuI AGGCCT 1 cut(s) 786
StyD4I CCNGG 2 cut(s) 306, 1291
StyI CCWWGG 3 cut(s) 796, 882, 1357
TaaI ACNGT 3 cut(s) 1064, 1149, 1304
TaqI TCGA 2 cut(s) 102, 1394
TatI WGTACW 3 cut(s) 894, 942, 1225
TauI GCSGC 1 cut(s) 851
TfiI GAWTC 5 cut(s) 152, 380, 506, 820, 1391
Tru1I TTAA 6 cut(s) 609, 738, 912, 1280, 1415, 1548
Tru9I TTAA 6 cut(s) 609, 738, 912, 1280, 1415, 1548
TscAI CASTG 2 cut(s) 336, 1069
TseFI GTSAC 2 cut(s) 286, 1168
TseI GCWGC 6 cut(s) 497, 689, 845, 1109, 1112, 1511
Tsp45I GTSAC 2 cut(s) 286, 1168
TspDTI ATGAA 6 cut(s) 330, 364, 620, 898, 1360, 1572
TspRI CASTG 2 cut(s) 336, 1069
Tth111I GACNNNGTC 1 cut(s) 1399
Van91I CCANNNNNTGG 1 cut(s) 1363
Vha464I CTTAAG 1 cut(s) 1414
VpaK11BI GGWCC 2 cut(s) 857, 879
XapI RAATTY 4 cut(s) 41, 131, 242, 1580
XceI RCATGY 1 cut(s) 457
XspI CTAG 4 cut(s) 399, 422, 768, 1104
ZrmI AGTACT 1 cut(s) 1227
Zsp2I ATGCAT 2 cut(s) 459, 1424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.