Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004948.1

Orthogroup ID

OG0000775

Physical Location & Seq

Genomic Coordinates Forward (+)

89437 .. 92440

Gene Structure 3004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004948.1_g000024.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

atgaacttcaattgttcaaacactcagtcatggatcaaagccggttaccattacaccggtgatgaattccctgtttctgacatagattccacattgttcactcaccttatatgtggttttgcctttataaactcttccacttaccagctctcaatcaactcctccacccaacaagaattctccactttcacaaatgttgtcaagcgcaaaaactcagaagtcacagccttgctatccatctggggtggaggagaagattattcagtgttgttttcagtgctgaaccagtcttctcaccggagatctttcattgaatcttcaataacgacagctagactttatgagtttgatgggctagacctcacgggggctgtaccaagaacaagcatgcacaccacatctttgggaacatttctaaatgagtggcgtgctgcggtggattctgaagcaaaaaagtcaggaaagtcaggtttgctcttgacaatggcacttcatcatcatatgcaggttatggatacggtgacttatcccattgactcaattaagaagaacttgaattgggctcatcttggggcatatgattactatcttcctaaagaggaaaacttcacacaccctcatgctgctttatatgacccaataacaaatgggactaatacgaatagtcgtgttaaggacttgataagcagaggactacctgctagcaagcttgttttaggcttgccttaccatggttatggttggactcttgtgaatcccagcgacaataacgttggtgcagcggcatcaggtcctgcggttaccatagacgggtccatgggctataagtacatcaaatggttcattaagaaaattggatatggtgcagttcctatgtacaatgacacttatgtggtgaattactgcacaattgggtcaagttggattaattttgatgatgtagaggctatcaaggcgaaagtttcttacgctaagaagatgggacttcttggctacaatgtgtttcaagttggcaatgatgacaattgggtgctctctagggcagcaggtcaccaccatgtttaccttgacagctcaaaaggaaggaggtcaacagaacaagaacggttagtagtgattgttctggtcacaattgctatgattatcctactgggaacaatgatgtgttacctacaaaggagagtactcaagtcaattgggattatagacaacatcaaaagatcagtttacaggctattgaatatagttccaggtacagacagttttcacagcaatgctcctaatctgcaagtattcaattatacaaccatcaaggaggctacaaataacttttcgagtcagaataagcttggagagggtggctttggacctgtatacaagggtacattaaggaagggtcagcaaatagcagtgaaaagactttcgaaaacttcaaaccaaggccttgaagagtttcaaaatgaggttacacttactgcaacactgcaccatgtgaatctagttagagttctgggatactacaccaagaggcaagaaaagatgctgatatatgagaacatgccaaacaaaagcttggatcactacctctttgatccaagtagacgcaatcttttggattgggagcaacgtgtccacatcattgaaggggtaattcaagggcttctatatctccaagaatactcgaactctacaataattcaccgtgatctgaaagcaagtaacattctgttagatgatgagatgaactcgaaaatatcagattttggtctagccagagctttcagaaagagtgaacatgaggcaaacactggtcgcattgtaggaacatatggctatgttccccctgaatatgtaagaagaggcatttattccatgaaatacgatgtttacagcttcggtgttctgcttctgcaaatcataagtggcaagagaagttcatgtttttatggcttagatggaaatttaaacattctagaacacgcatatgagttgtggagagaaggccaaggcatggatttcatagatccaacccttgatgattcgacttcgtcttgcaagctcttaagatgcatggaagtagccttgttatgtgtccaagaaaatccagtagatagaccatccatgctggaggtttgttcaatgctcaagagtgaaatttcagccatcattagtcctaaaaagcctgctttctcggttaagaaggatgaagatgaggatcatatatacaaattcagggaagaaatctattcagtcaatgatgcaacaatgtcggaaattgtgccccgatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Glyco_hydro_18 Pkinase Pkinase_Tyr

Protein Analysis

762

Amino Acids

85.96

Weight (kDa)

7.09

Isoelectric Point (pI)

41.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000775)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g01350 FvH4_1g01363 FvH4_1g01365 FvH4_1g01383 FvH4_1g01390 FvH4_1g01420
malus_domestica	MD02G1011200.v1.1 MD02G1011400.v1.1 MD15G1156200.v1.1 MD15G1156300.v1.1 MD15G1156600.v1.1 MD15G1156700.v1.1 MD15G1156900.v1.1 MD15G1157000.v1.1
prunus_persica	Prupe.7G258600_v2.0.a1 Prupe.7G258700_v2.0.a1 Prupe.7G258700_v2.0.a1 Prupe.7G258800_v2.0.a1 Prupe.7G258900_v2.0.a1
pyrus_communis	pycom02g01010 pycom02g01020 pycom14g14440 pycom15g14020 pycom15g14030 pycom15g14050 pycom15g14060 pycom15g14080
rosa_chinensis	RchiOBHm_Chr2g0086191 RchiOBHm_Chr2g0086211 RchiOBHm_Chr2g0086231 RchiOBHm_Chr2g0086261 RchiOBHm_Chr2g0086281 RchiOBHm_Chr2g0086301 RchiOBHm_Chr2g0086311 RchiOBHm_Chr2g0086321 RchiOBHm_Chr2g0160801 RchiOBHm_Chr6g0247981 RchiOBHm_Chr6g0247991
rosa_laevigata	RLG00000015749
rosa_multiflora	Rmu_co8497771.1_g000001 Rmu_sc0004510.1_g000014 Rmu_sc0004510.1_g000018 Rmu_sc0004948.1_g000005 Rmu_sc0004948.1_g000017 Rmu_sc0004948.1_g000018 Rmu_sc0004948.1_g000024
rosa_roxburghii	Rroxscaffold_2G00154700 Rroxscaffold_2G00154710
rosa_rugosa	Rorug01G0466400 Rorug01G0466500 Rorug05G0529900
rosa_samantha	Rh2AG016200 Rh2AG016300 Rh2AG016500 Rh2AG016700 Rh2BG016300 Rh2BG016400 Rh2BG016500 Rh2CG017200 Rh2CG017300 Rh2CG017400 Rh2CG017500 Rh2CG017600 Rh2DG018200 Rh2DG018300 Rh6AG044800 Rh6BG039800
rosa_wichuraiana	Rw0G015400 Rw2G001400 Rw2G001410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	128
Acc36I	ACCTGC	3 cut(s)	496, 706, 1037
AccB7I	CCANNNNNTGG	1 cut(s)	2011
AccI	GTMKAC	2 cut(s)	1374, 1600
AciI	CCGC	3 cut(s)	434, 782, 797
AclI	AACGTT	1 cut(s)	771
AclWI	GGATC	5 cut(s)	41, 1584, 1586, 2018, 2223
AcsI	RAATTY	5 cut(s)	65, 176, 1960, 2154, 2228
AcuI	CTGAAG	1 cut(s)	465
AdeI	CACNNNGTG	1 cut(s)	1492
AfaI	GTAC	6 cut(s)	375, 830, 878, 1185, 1255, 1384
AfiI	CCNNNNNNNGG	4 cut(s)	367, 731, 810, 2011
AflII	CTTAAG	1 cut(s)	2062
AflIII	ACRYGT	1 cut(s)	1627
AgeI	ACCGGT	1 cut(s)	56
AjnI	CCWGG	1 cut(s)	1249
AleI	CACNNNNGTG	1 cut(s)	890
AluBI	AGCT	9 cut(s)	148, 332, 709, 1074, 1348, 1572, 1778, 1893, 2059
AluI	AGCT	9 cut(s)	148, 332, 709, 1074, 1348, 1572, 1778, 1893, 2059
Alw21I	GWGCWC	1 cut(s)	1035
AlwI	GGATC	5 cut(s)	41, 1584, 1586, 2018, 2223
AlwNI	CAGNNNCTG	1 cut(s)	794
AoxI	GGCC	2 cut(s)	1441, 2002
ApeKI	GCWGC	4 cut(s)	431, 623, 779, 1043
ApoI	RAATTY	5 cut(s)	65, 176, 1960, 2154, 2228
ArsI	GACNNNNNNTTYG	2 cut(s)	11, 43
AseI	ATTAAT	1 cut(s)	927
AsiGI	ACCGGT	1 cut(s)	56
Asp700I	GAANNNNTTC	1 cut(s)	1452
AspLEI	GCGC	1 cut(s)	207
AspS9I	GGNCC	3 cut(s)	791, 813, 1367
AsuHPI	GGTGA	7 cut(s)	71, 95, 287, 532, 907, 1043, 1691
AsuII	TTCGAA	1 cut(s)	1424
AsuNHI	GCTAGC	1 cut(s)	701
AvaII	GGWCC	3 cut(s)	791, 813, 1367
BaeGI	GKGCMC	1 cut(s)	2283
BanII	GRGCYC	1 cut(s)	565
BbsI	GAAGAC	1 cut(s)	282
Bbv12I	GWGCWC	1 cut(s)	1035
BbvI	GCAGC	4 cut(s)	418, 610, 791, 1055
BccI	CCATC	7 cut(s)	245, 344, 973, 1316, 1949, 2125, 2171
BcgI	CGANNNNNNTGC	2 cut(s)	2250, 2284
BciT130I	CCWGG	1 cut(s)	1251
BciVI	GTATCC	2 cut(s)	508, 1508
BfaI	CTAG	7 cut(s)	333, 356, 702, 1038, 1499, 1769, 1973
BfrI	CTTAAG	1 cut(s)	2062
BfuAI	ACCTGC	3 cut(s)	496, 706, 1037
BfuI	GTATCC	2 cut(s)	508, 1508
BglII	AGATCT	1 cut(s)	302
BisI	GCNGC	5 cut(s)	432, 624, 780, 783, 1044
BlsI	GCNGC	5 cut(s)	433, 625, 781, 784, 1045
BmcAI	AGTACT	1 cut(s)	1185
Bme1390I	CCNGG	1 cut(s)	1251
Bme18I	GGWCC	3 cut(s)	791, 813, 1367
BmgT120I	GGNCC	3 cut(s)	791, 813, 1367
BmiI	GGNNCC	1 cut(s)	814
BmrFI	CCNGG	1 cut(s)	1251
BmrI	ACTGGG	1 cut(s)	1160
BmsI	GCATC	4 cut(s)	794, 1530, 2057, 2248
BmtI	GCTAGC	1 cut(s)	705
BmuI	ACTGGG	1 cut(s)	1160
BpiI	GAAGAC	1 cut(s)	282
BplI	GAGNNNNNCTC	2 cut(s)	1730, 1762
BpmI	CTGGAG	1 cut(s)	2147
Bpu14I	TTCGAA	1 cut(s)	1424
BpuEI	CTTGAG	2 cut(s)	1172, 2129
BsaBI	GATNNNNATC	2 cut(s)	585, 2214
BsaJI	CCNNGG	4 cut(s)	730, 816, 1438, 2005
BsaWI	WCCGGW	2 cut(s)	56, 297
Bsc4I	CCNNNNNNNGG	4 cut(s)	367, 731, 810, 2011
Bse118I	RCCGGY	2 cut(s)	41, 56
Bse1I	ACTGG	4 cut(s)	286, 1155, 1813, 2105
Bse3DI	GCAATG	2 cut(s)	1021, 1279
Bse8I	GATNNNNATC	2 cut(s)	585, 2214
BseBI	CCWGG	1 cut(s)	1251
BseDI	CCNNGG	4 cut(s)	730, 816, 1438, 2005
BseGI	GGATG	2 cut(s)	2117, 2209
BseJI	GATNNNNATC	2 cut(s)	585, 2214
BseLI	CCNNNNNNNGG	4 cut(s)	367, 731, 810, 2011
BseMI	GCAATG	2 cut(s)	1021, 1279
BseMII	CTCAG	2 cut(s)	38, 228
BseNI	ACTGG	4 cut(s)	286, 1155, 1813, 2105
BseRI	GAGGAG	2 cut(s)	151, 264
BseSI	GKGCMC	1 cut(s)	2283
BseXI	GCAGC	4 cut(s)	418, 610, 791, 1055
BseYI	CCCAGC	1 cut(s)	758
BsgI	GTGCAG	4 cut(s)	798, 885, 889, 1469
BshFI	GGCC	2 cut(s)	1443, 2004
BshTI	ACCGGT	1 cut(s)	56
BsiHKAI	GWGCWC	1 cut(s)	1035
BsiSI	CCGG	3 cut(s)	42, 57, 298
BslFI	GGGAC	2 cut(s)	664, 996
BslI	CCNNNNNNNGG	4 cut(s)	367, 731, 810, 2011
BsmFI	GGGAC	2 cut(s)	664, 996
BsnI	GGCC	2 cut(s)	1443, 2004
Bsp119I	TTCGAA	1 cut(s)	1424
Bsp1286I	GDGCHC	3 cut(s)	565, 1035, 2283
Bsp1407I	TGTACA	1 cut(s)	876
Bsp143I	GATC	8 cut(s)	33, 302, 1220, 1576, 1591, 1705, 2023, 2215
Bsp19I	CCATGG	2 cut(s)	730, 816
BspACI	CCGC	3 cut(s)	434, 782, 797
BspANI	GGCC	2 cut(s)	1443, 2004
BspCNI	CTCAG	2 cut(s)	37, 227
BspLI	GGNNCC	1 cut(s)	814
BspMI	ACCTGC	3 cut(s)	496, 706, 1037
BspOI	GCTAGC	1 cut(s)	705
BspPI	GGATC	5 cut(s)	41, 1584, 1586, 2018, 2223
BspT104I	TTCGAA	1 cut(s)	1424
BspTI	CTTAAG	1 cut(s)	2062
BsrDI	GCAATG	2 cut(s)	1021, 1279
BsrFI	RCCGGY	2 cut(s)	41, 56
BsrGI	TGTACA	1 cut(s)	876
BsrI	ACTGG	4 cut(s)	286, 1155, 1813, 2105
BssAI	RCCGGY	2 cut(s)	41, 56
BssECI	CCNNGG	4 cut(s)	730, 816, 1438, 2005
BssMI	GATC	8 cut(s)	33, 302, 1220, 1576, 1591, 1705, 2023, 2215
BssNAI	GTATAC	1 cut(s)	1375
BssT1I	CCWWGG	4 cut(s)	730, 816, 1438, 2005
Bst1107I	GTATAC	1 cut(s)	1375
Bst2UI	CCWGG	1 cut(s)	1251
Bst4CI	ACNGT	4 cut(s)	520, 1107, 1262, 1703
Bst6I	CTCTTC	3 cut(s)	139, 1443, 1852
BstAFI	CTTAAG	1 cut(s)	2062
BstAUI	TGTACA	1 cut(s)	876
BstBI	TTCGAA	1 cut(s)	1424
BstC8I	GCNNGC	7 cut(s)	389, 429, 703, 707, 722, 2057, 2184
BstDEI	CTNAG	4 cut(s)	24, 214, 972, 1951
BstDSI	CCRYGG	2 cut(s)	730, 816
BstEII	GGTNACC	3 cut(s)	44, 799, 1049
BstF5I	GGATG	2 cut(s)	2117, 2209
BstHHI	GCGC	1 cut(s)	207
BstKTI	GATC	8 cut(s)	36, 305, 1223, 1579, 1594, 1708, 2026, 2218
BstMBI	GATC	8 cut(s)	33, 302, 1220, 1576, 1591, 1705, 2023, 2215
BstMWI	GCNNNNNNNGC	1 cut(s)	953
BstNI	CCWGG	1 cut(s)	1251
BstNSI	RCATGY	2 cut(s)	391, 1561
BstPI	GGTNACC	3 cut(s)	44, 799, 1049
BstSCI	CCNGG	1 cut(s)	1249
BstSLI	GKGCMC	1 cut(s)	2283
BstV1I	GCAGC	4 cut(s)	418, 610, 791, 1055
BstV2I	GAAGAC	1 cut(s)	282
BstX2I	RGATCY	2 cut(s)	302, 2023
BstXI	CCANNNNNNTGG	2 cut(s)	403, 737
BstYI	RGATCY	2 cut(s)	302, 2023
BstZ17I	GTATAC	1 cut(s)	1375
BsuI	GTATCC	2 cut(s)	508, 1508
BsuRI	GGCC	2 cut(s)	1443, 2004
BtgI	CCRYGG	2 cut(s)	730, 816
BtsCI	GGATG	2 cut(s)	2117, 2209
BtsI	GCAGTG	2 cut(s)	1416, 1481
BtsIMutI	CAGTG	5 cut(s)	270, 282, 1416, 1481, 1806
BveI	ACCTGC	3 cut(s)	496, 706, 1037
Cac8I	GCNNGC	7 cut(s)	389, 429, 703, 707, 722, 2057, 2184
CaiI	CAGNNNCTG	1 cut(s)	794
CfoI	GCGC	1 cut(s)	207
Cfr10I	RCCGGY	2 cut(s)	41, 56
Cfr13I	GGNCC	3 cut(s)	791, 813, 1367
CseI	GACGC	1 cut(s)	1611
Csp6I	GTAC	6 cut(s)	374, 829, 877, 1184, 1254, 1383
CspAI	ACCGGT	1 cut(s)	56
CviQI	GTAC	6 cut(s)	374, 829, 877, 1184, 1254, 1383
DdeI	CTNAG	4 cut(s)	24, 214, 972, 1951
DpnI	GATC	8 cut(s)	35, 304, 1222, 1578, 1593, 1707, 2025, 2217
DpnII	GATC	8 cut(s)	33, 302, 1220, 1576, 1591, 1705, 2023, 2215
DraI	TTTAAA	1 cut(s)	1965
DraIII	CACNNNGTG	1 cut(s)	1492
Eam1104I	CTCTTC	3 cut(s)	139, 1443, 1852
EarI	CTCTTC	3 cut(s)	139, 1443, 1852
Eco130I	CCWWGG	4 cut(s)	730, 816, 1438, 2005
Eco147I	AGGCCT	1 cut(s)	1443
Eco24I	GRGCYC	1 cut(s)	565
Eco47I	GGWCC	3 cut(s)	791, 813, 1367
Eco57I	CTGAAG	1 cut(s)	465
Eco91I	GGTNACC	3 cut(s)	44, 799, 1049
EcoO109I	RGGNCCY	1 cut(s)	791
EcoO65I	GGTNACC	3 cut(s)	44, 799, 1049
EcoRI	GAATTC	2 cut(s)	65, 176
EcoRII	CCWGG	1 cut(s)	1249
EcoT14I	CCWWGG	4 cut(s)	730, 816, 1438, 2005
EcoT22I	ATGCAT	1 cut(s)	2072
EcoT38I	GRGCYC	1 cut(s)	565
ErhI	CCWWGG	4 cut(s)	730, 816, 1438, 2005
FalI	AAGNNNNNCTT	2 cut(s)	536, 568
FaqI	GGGAC	2 cut(s)	664, 996
FauNDI	CATATG	4 cut(s)	501, 577, 1828, 1984
FblI	GTMKAC	2 cut(s)	1374, 1600
Fnu4HI	GCNGC	5 cut(s)	432, 624, 780, 783, 1044
FokI	GGATG	2 cut(s)	2104, 2216
FriOI	GRGCYC	1 cut(s)	565
Fsp4HI	GCNGC	5 cut(s)	432, 624, 780, 783, 1044
FspBI	CTAG	7 cut(s)	333, 356, 702, 1038, 1499, 1769, 1973
GlaI	GCGC	1 cut(s)	206
GluI	GCNGC	5 cut(s)	432, 624, 780, 783, 1044
GsaI	CCCAGC	1 cut(s)	762
GsuI	CTGGAG	1 cut(s)	2147
HaeIII	GGCC	2 cut(s)	1443, 2004
HapII	CCGG	3 cut(s)	42, 57, 298
HgaI	GACGC	1 cut(s)	1611
HhaI	GCGC	1 cut(s)	207
Hin6I	GCGC	1 cut(s)	205
HinP1I	GCGC	1 cut(s)	205
HincII	GTYRAC	1 cut(s)	1092
HindII	GTYRAC	1 cut(s)	1092
HindIII	AAGCTT	3 cut(s)	707, 1346, 1570
HinfI	GANTC	9 cut(s)	86, 314, 440, 536, 745, 754, 1336, 1495, 2039
HpaII	CCGG	3 cut(s)	42, 57, 298
HphI	GGTGA	7 cut(s)	71, 95, 287, 532, 907, 1043, 1691
Hpy166II	GTNNAC	9 cut(s)	99, 1063, 1092, 1228, 1375, 1601, 1633, 1793, 1888
Hpy188I	TCNGA	8 cut(s)	79, 217, 445, 1341, 1710, 1759, 1784, 2272
Hpy188III	TCNNGA	4 cut(s)	459, 478, 1973, 2146
Hpy8I	GTNNAC	9 cut(s)	99, 1063, 1092, 1228, 1375, 1601, 1633, 1793, 1888
HpyAV	CCTTC	5 cut(s)	1077, 1387, 1637, 1994, 2194
HpyCH4III	ACNGT	4 cut(s)	520, 1107, 1262, 1703
HpyCH4IV	ACGT	2 cut(s)	771, 1627
HpyF10VI	GCNNNNNNNGC	1 cut(s)	953
HpyF3I	CTNAG	4 cut(s)	24, 214, 972, 1951
HpySE526I	ACGT	2 cut(s)	771, 1627
HspAI	GCGC	1 cut(s)	205
Kzo9I	GATC	8 cut(s)	33, 302, 1220, 1576, 1591, 1705, 2023, 2215
LmnI	GCTCC	2 cut(s)	1282, 1621
Lsp1109I	GCAGC	4 cut(s)	418, 610, 791, 1055
LweI	GCATC	4 cut(s)	794, 1530, 2057, 2248
MaeI	CTAG	7 cut(s)	333, 356, 702, 1038, 1499, 1769, 1973
MaeII	ACGT	2 cut(s)	771, 1627
MaeIII	GTNAC	9 cut(s)	44, 220, 520, 799, 1049, 1126, 1166, 1465, 1718
MalI	GATC	8 cut(s)	35, 304, 1222, 1578, 1593, 1707, 2025, 2217
MboI	GATC	8 cut(s)	33, 302, 1220, 1576, 1591, 1705, 2023, 2215
MfeI	CAATTG	5 cut(s)	10, 909, 1024, 1131, 1194
MflI	RGATCY	2 cut(s)	302, 2023
MhlI	GDGCHC	3 cut(s)	565, 1035, 2283
MlyI	GAGTC	3 cut(s)	530, 739, 1345
MmeI	TCCRAC	4 cut(s)	722, 902, 2051, 2250
Mph1103I	ATGCAT	1 cut(s)	2072
MroXI	GAANNNNTTC	1 cut(s)	1452
MseI	TTAA	8 cut(s)	543, 672, 846, 927, 1388, 1964, 2063, 2196
MslI	CAYNNNNRTG	6 cut(s)	618, 735, 890, 1056, 1272, 1983
MspA1I	CMGCKG	1 cut(s)	782
MspCI	CTTAAG	1 cut(s)	2062
MspI	CCGG	3 cut(s)	42, 57, 298
MspR9I	CCNGG	1 cut(s)	1251
MunI	CAATTG	5 cut(s)	10, 909, 1024, 1131, 1194
MvaI	CCWGG	1 cut(s)	1251
MwoI	GCNNNNNNNGC	1 cut(s)	953
NcoI	CCATGG	2 cut(s)	730, 816
NdeI	CATATG	4 cut(s)	501, 577, 1828, 1984
NdeII	GATC	8 cut(s)	33, 302, 1220, 1576, 1591, 1705, 2023, 2215
NheI	GCTAGC	1 cut(s)	701
NlaIV	GGNNCC	1 cut(s)	814
NmuCI	GTSAC	4 cut(s)	220, 520, 1049, 1126
NsiI	ATGCAT	1 cut(s)	2072
NspI	RCATGY	2 cut(s)	391, 1561
NspV	TTCGAA	1 cut(s)	1424
OliI	CACNNNNGTG	1 cut(s)	890
PaeI	GCATGC	1 cut(s)	391
PceI	AGGCCT	1 cut(s)	1443
PdmI	GAANNNNTTC	1 cut(s)	1452
PfeI	GAWTC	6 cut(s)	86, 314, 440, 754, 1495, 2039
PflFI	GACNNNGTC	1 cut(s)	2047
PflMI	CCANNNNNTGG	1 cut(s)	2011
PinAI	ACCGGT	1 cut(s)	56
PkrI	GCNGC	5 cut(s)	433, 625, 781, 784, 1045
PleI	GAGTC	3 cut(s)	530, 739, 1344
PpsI	GAGTC	3 cut(s)	530, 739, 1344
PpuMI	RGGWCCY	1 cut(s)	791
PshBI	ATTAAT	1 cut(s)	927
PsiI	TTATAA	1 cut(s)	128
Psp1406I	AACGTT	1 cut(s)	771
Psp5II	RGGWCCY	1 cut(s)	791
Psp6I	CCWGG	1 cut(s)	1249
PspEI	GGTNACC	3 cut(s)	44, 799, 1049
PspFI	CCCAGC	1 cut(s)	758
PspGI	CCWGG	1 cut(s)	1249
PspN4I	GGNNCC	1 cut(s)	814
PspPI	GGNCC	3 cut(s)	791, 813, 1367
PspPPI	RGGWCCY	1 cut(s)	791
PsrI	GAACNNNNNNTAC	2 cut(s)	1104, 1136
PstNI	CAGNNNCTG	1 cut(s)	794
PsuI	RGATCY	2 cut(s)	302, 2023
PsyI	GACNNNGTC	1 cut(s)	2047
RsaI	GTAC	6 cut(s)	375, 830, 878, 1185, 1255, 1384
RsaNI	GTAC	6 cut(s)	374, 829, 877, 1184, 1254, 1383
RseI	CAYNNNNRTG	6 cut(s)	618, 735, 890, 1056, 1272, 1983
SaqAI	TTAA	8 cut(s)	543, 672, 846, 927, 1388, 1964, 2063, 2196
SatI	GCNGC	5 cut(s)	432, 624, 780, 783, 1044
Sau3AI	GATC	8 cut(s)	33, 302, 1220, 1576, 1591, 1705, 2023, 2215
Sau96I	GGNCC	3 cut(s)	791, 813, 1367
ScaI	AGTACT	1 cut(s)	1185
SchI	GAGTC	3 cut(s)	530, 739, 1345
ScrFI	CCNGG	1 cut(s)	1251
SduI	GDGCHC	3 cut(s)	565, 1035, 2283
SfaNI	GCATC	4 cut(s)	794, 1530, 2057, 2248
SfuI	TTCGAA	1 cut(s)	1424
SgrAI	CRCCGGYG	1 cut(s)	56
SinI	GGWCC	3 cut(s)	791, 813, 1367
SmiMI	CAYNNNNRTG	6 cut(s)	618, 735, 890, 1056, 1272, 1983
SmlI	CTYRAG	3 cut(s)	1187, 2062, 2144
SmoI	CTYRAG	3 cut(s)	1187, 2062, 2144
SphI	GCATGC	1 cut(s)	391
SseBI	AGGCCT	1 cut(s)	1443
SsiI	CCGC	3 cut(s)	434, 782, 797
SspMI	CTAG	7 cut(s)	333, 356, 702, 1038, 1499, 1769, 1973
StuI	AGGCCT	1 cut(s)	1443
StyD4I	CCNGG	1 cut(s)	1249
StyI	CCWWGG	4 cut(s)	730, 816, 1438, 2005
TaaI	ACNGT	4 cut(s)	520, 1107, 1262, 1703
TaiI	ACGT	2 cut(s)	774, 1630
TaqI	TCGA	5 cut(s)	1334, 1424, 1682, 1748, 2042
TatI	WGTACW	3 cut(s)	828, 876, 1183
TauI	GCSGC	1 cut(s)	785
TfiI	GAWTC	6 cut(s)	86, 314, 440, 754, 1495, 2039
Tru1I	TTAA	8 cut(s)	543, 672, 846, 927, 1388, 1964, 2063, 2196
Tru9I	TTAA	8 cut(s)	543, 672, 846, 927, 1388, 1964, 2063, 2196
TscAI	CASTG	5 cut(s)	270, 282, 1416, 1488, 1813
TseFI	GTSAC	4 cut(s)	220, 520, 1049, 1126
TseI	GCWGC	4 cut(s)	431, 623, 779, 1043
Tsp45I	GTSAC	4 cut(s)	220, 520, 1049, 1126
TspRI	CASTG	5 cut(s)	270, 282, 1416, 1488, 1813
Tth111I	GACNNNGTC	1 cut(s)	2047
Van91I	CCANNNNNTGG	1 cut(s)	2011
Vha464I	CTTAAG	1 cut(s)	2062
VpaK11BI	GGWCC	3 cut(s)	791, 813, 1367
VspI	ATTAAT	1 cut(s)	927
XapI	RAATTY	5 cut(s)	65, 176, 1960, 2154, 2228
XbaI	TCTAGA	1 cut(s)	1972
XceI	RCATGY	2 cut(s)	391, 1561
XmiI	GTMKAC	2 cut(s)	1374, 1600
XmnI	GAANNNNTTC	1 cut(s)	1452
XspI	CTAG	7 cut(s)	333, 356, 702, 1038, 1499, 1769, 1973
ZrmI	AGTACT	1 cut(s)	1185
Zsp2I	ATGCAT	1 cut(s)	2072

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.