Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000775

Physical Location & Seq

Genomic Coordinates Reverse (-)

55897790 .. 55900387

Gene Structure 2598 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0466500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGGCTATTAATCCAGACGACAGCTTCATCATAAGCATTACAGCAGGTTACACTTTAGACAGTAAAGGGAGGCTGCAATCTCCTAAGACTCCTATGAACAGTGGAGGACATTCAATATTGTCAGAGACAAAATGGCCTACCTTTAAGGAATTTTTTGACCCCCAGGGGGTTTTCATTGCAATGTGGTATAAGATATTTGTGATTTCATGTCTGATTTCAGTAACCGCAGACCCTTTGTTCTTCTACATCCCCTACATCAACAAAGATAAAAAGTGCATTGATGGGGACAAGAGGGTGAGAACTGCAGCTCTAGTCCTCCGATCACTCACCGATATGACTTTCATAATGCATATTATACATGAAATTCGTGTTAGTACCAACACTGTGGTGTCAGAGATATCAAAAAGAGGAAAGCCAGGTTGGCCATGGAAAAAGGCAGAGTTACTTGGCTTTGCCAAGGCAATATCTCAGAAGATGTCCTGGTTATCTATCTCCATCATTATAGACTTTATAGCCATTCTTCCGATCCCACAAGTGGCGCTGCTGGTATTCTTTCTGAAAATGGATGGCTCAGATTACAGAAGGAAGATTTTAAACGGGTTCCTGCTCTTTCAATATATGCCAAAGATTTATAGAATCTACCTTTCGTGTAAAGAACTTAAACAAACTGGAATATGGGCTAGAGGTGCATTCAATATTTTTCTCTACATCCTCGCTAGTCATGTACTTGGAGCCTTTTGGTATTTCATTTCTATTCAACGAGAGACATCATGCTGGCACAGGGCTTGTGAAGGACATCCTAATATTATAGAATGTATGTCAACTTACTACTGTGATGACACACCTAGAAATCAACAATATATCACACTCCTCAGCAAAAATTGCTCGGCTGCAATTCCATCAAATGCAACACAATTTAATTTTGGAATCTTCCTTAATGCCCTTGAGCCCGATTTGTCTGATTTTCCCAAGAAGTTCTTTTACTCTTTCTGTTCTCTTGGTCAAAATTTGGAAACGAGTACCTATGTGTGGGAAAACTGCTTCGCAATCGTTATATCTCTAATTGGTTTGCTACTATTTTTGTATCTTATTGGAAATGTACAGACGTATATACAGTTGGCAACTACGAAATCGGAAGAGATAAGACAGAAGATGATAATGAAAGAGCTAGAGATACAATGGTGGATGTCCAGAAATCATCTCCCTAACGATATGAAGACAGTGATCATCGAAAACGTAAGACAGAAATTGGAAGAAAACAAAGATGTTCATGTGGAGAATCTACTCTCTATTCTTCCCCGGAAGGACAGAAGGTCCATAAAGCGCCTTCTCTGCATGGACTCACTTAAGAAAGTACCGATGCTTCGATATATGGATGAAAGTGTGTTAAAACTCATCTGCGACAATCTGAAACCAGTAATCTACACAGAGAACAGTTATGTAATTCGAGCAGGAGAACCACTTGATCTAATGCTCTTCAACGCAGAAGGCATTATATGGACTTACACAACAAGTACTGATGGTTCAATAAAAATGGGTTCCTCAATCACACAGTGTCTTGGTAAAGGTGATTTCTATGGAGAAGAACTTTTGAGTTGGGCTTCCTCATACATGTCCTTCTCCGACCTCCCTATCTCGACCCAAAATGTAAAATGCCATACAAAAGTTGAAGCCTTTACTCTCATGGCAAAGGACTTGAAGGCTGTGGTCTCCAAATTCTGGTGGCATTTCAGCAAGGCGGTTCCCGATTTGAACAGAAACAATTCTCAGCTGGAGGAATTGGCTCTTTCTTCCCTAAGAGCCCGTCGCCGCAAACGATCAAAGAAGCATATAAAAGCTCCTCAGTTGTCTACTTACTCCCAAGAACTTGGGTACCTGCGGCTGTACCCTGTTAATCGTTGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Glyco_hydro_18 Pkinase Pkinase_Tyr

Protein Analysis

634

Amino Acids

73.13

Weight (kDa)

9.16

Isoelectric Point (pI)

49.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	62 - 378	5.2e-07	Ion transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000775)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g01350 FvH4_1g01363 FvH4_1g01365 FvH4_1g01383 FvH4_1g01390 FvH4_1g01420
malus_domestica	MD02G1011200.v1.1 MD02G1011400.v1.1 MD15G1156200.v1.1 MD15G1156300.v1.1 MD15G1156600.v1.1 MD15G1156700.v1.1 MD15G1156900.v1.1 MD15G1157000.v1.1
prunus_persica	Prupe.7G258600_v2.0.a1 Prupe.7G258700_v2.0.a1 Prupe.7G258700_v2.0.a1 Prupe.7G258800_v2.0.a1 Prupe.7G258900_v2.0.a1
pyrus_communis	pycom02g01010 pycom02g01020 pycom14g14440 pycom15g14020 pycom15g14030 pycom15g14050 pycom15g14060 pycom15g14080
rosa_chinensis	RchiOBHm_Chr2g0086191 RchiOBHm_Chr2g0086211 RchiOBHm_Chr2g0086231 RchiOBHm_Chr2g0086261 RchiOBHm_Chr2g0086281 RchiOBHm_Chr2g0086301 RchiOBHm_Chr2g0086311 RchiOBHm_Chr2g0086321 RchiOBHm_Chr2g0160801 RchiOBHm_Chr6g0247981 RchiOBHm_Chr6g0247991
rosa_laevigata	RLG00000015749
rosa_multiflora	Rmu_co8497771.1_g000001 Rmu_sc0004510.1_g000014 Rmu_sc0004510.1_g000018 Rmu_sc0004948.1_g000005 Rmu_sc0004948.1_g000017 Rmu_sc0004948.1_g000018 Rmu_sc0004948.1_g000024
rosa_roxburghii	Rroxscaffold_2G00154700 Rroxscaffold_2G00154710
rosa_rugosa	Rorug01G0466400 Rorug01G0466500 Rorug05G0529900
rosa_samantha	Rh2AG016200 Rh2AG016300 Rh2AG016500 Rh2AG016700 Rh2BG016300 Rh2BG016400 Rh2BG016500 Rh2CG017200 Rh2CG017300 Rh2CG017400 Rh2CG017500 Rh2CG017600 Rh2DG018200 Rh2DG018300 Rh6AG044800 Rh6BG039800
rosa_wichuraiana	Rw0G015400 Rw2G001400 Rw2G001410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	35, 1884
Acc65I	GGTACC	1 cut(s)	1872
AccB1I	GGYRCC	1 cut(s)	1872
AccB7I	CCANNNNNTGG	1 cut(s)	1719
AccI	GTMKAC	1 cut(s)	1850
AciI	CCGC	4 cut(s)	225, 1739, 1810, 1879
AclWI	GGATC	1 cut(s)	520
AcoI	YGGCCR	1 cut(s)	422
AcsI	RAATTY	4 cut(s)	149, 363, 1006, 1715
AdeI	CACNNNGTG	1 cut(s)	1554
AfaI	GTAC	8 cut(s)	376, 726, 1021, 1101, 1356, 1516, 1874, 1886
AfiI	CCNNNNNNNGG	4 cut(s)	166, 535, 1029, 1719
AflII	CTTAAG	1 cut(s)	1346
AflIII	ACRYGT	1 cut(s)	1611
AgsI	TTSAA	9 cut(s)	114, 614, 694, 758, 1480, 1527, 1670, 1699, 1753
AhdI	GACNNNNNGTC	1 cut(s)	1312
AjnI	CCWGG	3 cut(s)	162, 415, 479
AjuI	GAANNNNNNNTTGG	2 cut(s)	403, 435
AleI	CACNNNNGTG	1 cut(s)	386
AluBI	AGCT	5 cut(s)	24, 308, 1168, 1771, 1838
AluI	AGCT	5 cut(s)	24, 308, 1168, 1771, 1838
Alw26I	GTCTC	3 cut(s)	119, 758, 1714
AlwI	GGATC	1 cut(s)	520
AoxI	GGCC	2 cut(s)	134, 422
ApeKI	GCWGC	4 cut(s)	73, 305, 541, 890
ApoI	RAATTY	4 cut(s)	149, 363, 1006, 1715
AseI	ATTAAT	1 cut(s)	9
Asp700I	GAANNNNTTC	1 cut(s)	1762
Asp718I	GGTACC	1 cut(s)	1872
AspLEI	GCGC	2 cut(s)	541, 1326
AspS9I	GGNCC	1 cut(s)	1314
AsuC2I	CCSGG	1 cut(s)	1300
AsuHPI	GGTGA	3 cut(s)	307, 319, 1580
AvaII	GGWCC	1 cut(s)	1314
BaeI	ACNNNNGTAYC	4 cut(s)	1166, 1199, 1856, 1889
BalI	TGGCCA	1 cut(s)	424
BanI	GGYRCC	1 cut(s)	1872
BanII	GRGCYC	2 cut(s)	951, 1804
BarI	GAAGNNNNNNTAC	4 cut(s)	965, 997, 1347, 1379
BbsI	GAAGAC	1 cut(s)	1223
BbvCI	CCTCAGC	1 cut(s)	872
BbvI	GCAGC	4 cut(s)	60, 317, 528, 877
BccI	CCATC	5 cut(s)	275, 503, 560, 907, 1514
BciT130I	CCWGG	3 cut(s)	164, 417, 481
BclI	TGATCA	1 cut(s)	1224
BcnI	CCSGG	1 cut(s)	1300
BcoDI	GTCTC	3 cut(s)	119, 758, 1714
BfaI	CTAG	5 cut(s)	311, 681, 717, 846, 1169
BfmI	CTRYAG	1 cut(s)	303
BfoI	RGCGCY	2 cut(s)	542, 1327
BfrI	CTTAAG	1 cut(s)	1346
BfuAI	ACCTGC	2 cut(s)	35, 1884
BglI	GCCNNNNNGGC	1 cut(s)	421
BisI	GCNGC	6 cut(s)	74, 306, 542, 891, 1810, 1880
BlsI	GCNGC	6 cut(s)	75, 307, 543, 892, 1811, 1881
BmcAI	AGTACT	1 cut(s)	1516
Bme1390I	CCNGG	4 cut(s)	164, 417, 481, 1300
Bme18I	GGWCC	1 cut(s)	1314
BmeRI	GACNNNNNGTC	1 cut(s)	1312
BmgT120I	GGNCC	1 cut(s)	1314
BmiI	GGNNCC	5 cut(s)	602, 733, 1540, 1743, 1874
BmrFI	CCNGG	4 cut(s)	164, 417, 481, 1300
BmsI	GCATC	1 cut(s)	1350
BpiI	GAAGAC	1 cut(s)	1223
BpmI	CTGGAG	1 cut(s)	1793
Bpu10I	CCTNAGC	1 cut(s)	872
BpuEI	CTTGAG	1 cut(s)	965
BpuMI	CCSGG	1 cut(s)	1300
BsaI	GGTCTC	1 cut(s)	1714
BsaJI	CCNNGG	5 cut(s)	162, 163, 425, 456, 1298
Bsc4I	CCNNNNNNNGG	4 cut(s)	166, 535, 1029, 1719
Bse1I	ACTGG	2 cut(s)	673, 1415
Bse3DI	GCAATG	2 cut(s)	174, 186
BseBI	CCWGG	3 cut(s)	164, 417, 481
BseDI	CCNNGG	5 cut(s)	162, 163, 425, 456, 1298
BseGI	GGATG	6 cut(s)	246, 571, 708, 796, 1191, 1381
BseLI	CCNNNNNNNGG	4 cut(s)	166, 535, 1029, 1719
BseMI	GCAATG	2 cut(s)	174, 186
BseMII	CTCAG	5 cut(s)	482, 585, 886, 1781, 1856
BseNI	ACTGG	2 cut(s)	673, 1415
BseRI	GAGGAG	2 cut(s)	860, 1830
BseXI	GCAGC	4 cut(s)	60, 317, 528, 877
BshFI	GGCC	2 cut(s)	136, 424
BshNI	GGYRCC	1 cut(s)	1872
BsiSI	CCGG	1 cut(s)	1300
BslFI	GGGAC	1 cut(s)	299
BslI	CCNNNNNNNGG	4 cut(s)	166, 535, 1029, 1719
BsmAI	GTCTC	3 cut(s)	119, 758, 1714
BsmFI	GGGAC	1 cut(s)	299
BsmI	GAATGC	1 cut(s)	689
BsnI	GGCC	2 cut(s)	136, 424
Bso31I	GGTCTC	1 cut(s)	1714
Bsp1286I	GDGCHC	2 cut(s)	951, 1804
Bsp1407I	TGTACA	1 cut(s)	1099
Bsp143I	GATC	5 cut(s)	320, 525, 1224, 1465, 1817
Bsp19I	CCATGG	1 cut(s)	425
BspACI	CCGC	4 cut(s)	225, 1739, 1810, 1879
BspANI	GGCC	2 cut(s)	136, 424
BspCNI	CTCAG	5 cut(s)	481, 584, 885, 1780, 1855
BspLI	GGNNCC	5 cut(s)	602, 733, 1540, 1743, 1874
BspMAI	CTGCAG	1 cut(s)	307
BspMI	ACCTGC	2 cut(s)	35, 1884
BspPI	GGATC	1 cut(s)	520
BspQI	GCTCTTC	1 cut(s)	1481
BspT107I	GGYRCC	1 cut(s)	1872
BspTI	CTTAAG	1 cut(s)	1346
BspTNI	GGTCTC	1 cut(s)	1714
BsrDI	GCAATG	2 cut(s)	174, 186
BsrGI	TGTACA	1 cut(s)	1099
BsrI	ACTGG	2 cut(s)	673, 1415
BssECI	CCNNGG	5 cut(s)	162, 163, 425, 456, 1298
BssMI	GATC	5 cut(s)	320, 525, 1224, 1465, 1817
BssT1I	CCWWGG	2 cut(s)	425, 456
Bst2UI	CCWGG	3 cut(s)	164, 417, 481
Bst4CI	ACNGT	8 cut(s)	62, 101, 385, 833, 1116, 1222, 1436, 1554
Bst6I	CTCTTC	2 cut(s)	1131, 1481
BstAFI	CTTAAG	1 cut(s)	1346
BstAPI	GCANNNNNTGC	1 cut(s)	882
BstAUI	TGTACA	1 cut(s)	1099
BstC8I	GCNNGC	1 cut(s)	776
BstDEI	CTNAG	7 cut(s)	84, 468, 571, 872, 1767, 1796, 1842
BstDSI	CCRYGG	1 cut(s)	425
BstF5I	GGATG	6 cut(s)	246, 571, 708, 796, 1191, 1381
BstH2I	RGCGCY	2 cut(s)	542, 1327
BstHHI	GCGC	2 cut(s)	541, 1326
BstKTI	GATC	5 cut(s)	323, 528, 1227, 1468, 1820
BstMAI	GTCTC	3 cut(s)	119, 758, 1714
BstMBI	GATC	5 cut(s)	320, 525, 1224, 1465, 1817
BstMWI	GCNNNNNNNGC	4 cut(s)	421, 686, 882, 1332
BstNI	CCWGG	3 cut(s)	164, 417, 481
BstNSI	RCATGY	1 cut(s)	1615
BstSCI	CCNGG	4 cut(s)	162, 415, 479, 1298
BstSFI	CTRYAG	1 cut(s)	303
BstV1I	GCAGC	4 cut(s)	60, 317, 528, 877
BstV2I	GAAGAC	1 cut(s)	1223
BstXI	CCANNNNNNTGG	2 cut(s)	385, 1868
BsuRI	GGCC	2 cut(s)	136, 424
BtgI	CCRYGG	1 cut(s)	425
BtsCI	GGATG	6 cut(s)	246, 571, 708, 796, 1191, 1381
BtsIMutI	CAGTG	4 cut(s)	106, 381, 1227, 1559
BveI	ACCTGC	2 cut(s)	35, 1884
Cac8I	GCNNGC	1 cut(s)	776
CfoI	GCGC	2 cut(s)	541, 1326
Cfr13I	GGNCC	1 cut(s)	1314
Csp6I	GTAC	8 cut(s)	375, 725, 1020, 1100, 1355, 1515, 1873, 1885
CviAII	CATG	9 cut(s)	207, 359, 426, 722, 771, 1271, 1336, 1612, 1684
CviQI	GTAC	8 cut(s)	375, 725, 1020, 1100, 1355, 1515, 1873, 1885
DdeI	CTNAG	7 cut(s)	84, 468, 571, 872, 1767, 1796, 1842
DpnI	GATC	5 cut(s)	322, 527, 1226, 1467, 1819
DpnII	GATC	5 cut(s)	320, 525, 1224, 1465, 1817
DraI	TTTAAA	1 cut(s)	594
DraIII	CACNNNGTG	1 cut(s)	1554
DriI	GACNNNNNGTC	1 cut(s)	1312
EaeI	YGGCCR	1 cut(s)	422
Eam1104I	CTCTTC	2 cut(s)	1131, 1481
Eam1105I	GACNNNNNGTC	1 cut(s)	1312
EarI	CTCTTC	2 cut(s)	1131, 1481
Eco130I	CCWWGG	2 cut(s)	425, 456
Eco24I	GRGCYC	2 cut(s)	951, 1804
Eco31I	GGTCTC	1 cut(s)	1714
Eco32I	GATATC	1 cut(s)	399
Eco47I	GGWCC	1 cut(s)	1314
EcoRII	CCWGG	3 cut(s)	162, 415, 479
EcoRV	GATATC	1 cut(s)	399
EcoT14I	CCWWGG	2 cut(s)	425, 456
EcoT22I	ATGCAT	1 cut(s)	351
EcoT38I	GRGCYC	2 cut(s)	951, 1804
ErhI	CCWWGG	2 cut(s)	425, 456
FaeI	CATG	9 cut(s)	210, 362, 429, 725, 774, 1274, 1339, 1615, 1687
FalI	AAGNNNNNCTT	2 cut(s)	962, 994
FaqI	GGGAC	1 cut(s)	299
FatI	CATG	9 cut(s)	206, 358, 425, 721, 770, 1270, 1335, 1611, 1683
FbaI	TGATCA	1 cut(s)	1224
FblI	GTMKAC	1 cut(s)	1850
Fnu4HI	GCNGC	6 cut(s)	74, 306, 542, 891, 1810, 1880
FokI	GGATG	6 cut(s)	233, 578, 695, 783, 1198, 1388
FriOI	GRGCYC	2 cut(s)	951, 1804
Fsp4HI	GCNGC	6 cut(s)	74, 306, 542, 891, 1810, 1880
FspBI	CTAG	5 cut(s)	311, 681, 717, 846, 1169
GlaI	GCGC	2 cut(s)	540, 1325
GluI	GCNGC	6 cut(s)	74, 306, 542, 891, 1810, 1880
GsuI	CTGGAG	1 cut(s)	1793
HaeII	RGCGCY	2 cut(s)	542, 1327
HaeIII	GGCC	2 cut(s)	136, 424
HapII	CCGG	1 cut(s)	1300
HhaI	GCGC	2 cut(s)	541, 1326
Hin1II	CATG	9 cut(s)	210, 362, 429, 725, 774, 1274, 1339, 1615, 1687
Hin6I	GCGC	2 cut(s)	539, 1324
HinP1I	GCGC	2 cut(s)	539, 1324
HincII	GTYRAC	1 cut(s)	822
HindII	GTYRAC	1 cut(s)	822
HinfI	GANTC	5 cut(s)	88, 636, 927, 1279, 1340
HpaII	CCGG	1 cut(s)	1300
HphI	GGTGA	3 cut(s)	307, 319, 1580
Hpy166II	GTNNAC	2 cut(s)	822, 1851
Hpy188III	TCNNGA	4 cut(s)	14, 1191, 1636, 1745
Hpy8I	GTNNAC	2 cut(s)	822, 1851
Hpy99I	CGWCG	1 cut(s)	1809
HpyAV	CCTTC	8 cut(s)	576, 785, 1297, 1305, 1337, 1481, 1627, 1693
HpyCH4III	ACNGT	8 cut(s)	62, 101, 385, 833, 1116, 1222, 1436, 1554
HpyCH4IV	ACGT	2 cut(s)	1106, 1236
HpyCH4V	TGCA	9 cut(s)	76, 179, 276, 305, 349, 689, 893, 908, 1335
HpyF10VI	GCNNNNNNNGC	4 cut(s)	421, 686, 882, 1332
HpyF3I	CTNAG	7 cut(s)	84, 468, 571, 872, 1767, 1796, 1842
HpySE526I	ACGT	2 cut(s)	1106, 1236
Hsp92II	CATG	9 cut(s)	210, 362, 429, 725, 774, 1274, 1339, 1615, 1687
HspAI	GCGC	2 cut(s)	539, 1324
KpnI	GGTACC	1 cut(s)	1876
Ksp22I	TGATCA	1 cut(s)	1224
Kzo9I	GATC	5 cut(s)	320, 525, 1224, 1465, 1817
LguI	GCTCTTC	1 cut(s)	1481
LmnI	GCTCC	2 cut(s)	731, 1843
Lsp1109I	GCAGC	4 cut(s)	60, 317, 528, 877
LweI	GCATC	1 cut(s)	1350
MaeI	CTAG	5 cut(s)	311, 681, 717, 846, 1169
MaeII	ACGT	2 cut(s)	1106, 1236
MaeIII	GTNAC	3 cut(s)	47, 220, 441
MalI	GATC	5 cut(s)	322, 527, 1226, 1467, 1819
MboI	GATC	5 cut(s)	320, 525, 1224, 1465, 1817
MhlI	GDGCHC	2 cut(s)	951, 1804
MlsI	TGGCCA	1 cut(s)	424
MluNI	TGGCCA	1 cut(s)	424
MlyI	GAGTC	2 cut(s)	82, 1334
MmeI	TCCRAC	1 cut(s)	1647
Mox20I	TGGCCA	1 cut(s)	424
Mph1103I	ATGCAT	1 cut(s)	351
MroXI	GAANNNNTTC	1 cut(s)	1762
MscI	TGGCCA	1 cut(s)	424
MseI	TTAA	9 cut(s)	9, 144, 593, 660, 918, 936, 1347, 1388, 1893
MslI	CAYNNNNRTG	3 cut(s)	179, 332, 386
Msp20I	TGGCCA	1 cut(s)	424
MspA1I	CMGCKG	1 cut(s)	1771
MspCI	CTTAAG	1 cut(s)	1346
MspI	CCGG	1 cut(s)	1300
MspR9I	CCNGG	4 cut(s)	164, 417, 481, 1300
Mva1269I	GAATGC	1 cut(s)	689
MvaI	CCWGG	3 cut(s)	164, 417, 481
MwoI	GCNNNNNNNGC	4 cut(s)	421, 686, 882, 1332
NciI	CCSGG	1 cut(s)	1300
NcoI	CCATGG	1 cut(s)	425
NdeII	GATC	5 cut(s)	320, 525, 1224, 1465, 1817
NlaIII	CATG	9 cut(s)	210, 362, 429, 725, 774, 1274, 1339, 1615, 1687
NlaIV	GGNNCC	5 cut(s)	602, 733, 1540, 1743, 1874
NmeAIII	GCCGAG	1 cut(s)	866
NsiI	ATGCAT	1 cut(s)	351
NspI	RCATGY	1 cut(s)	1615
OliI	CACNNNNGTG	1 cut(s)	386
PasI	CCCWGGG	1 cut(s)	163
PciI	ACATGT	1 cut(s)	1611
PciSI	GCTCTTC	1 cut(s)	1481
PcsI	WCGNNNNNNNCGW	1 cut(s)	1813
PctI	GAATGC	1 cut(s)	689
PdmI	GAANNNNTTC	1 cut(s)	1762
PfeI	GAWTC	3 cut(s)	636, 927, 1279
PflMI	CCANNNNNTGG	1 cut(s)	1719
PkrI	GCNGC	6 cut(s)	75, 307, 543, 892, 1811, 1881
PleI	GAGTC	2 cut(s)	82, 1334
PpsI	GAGTC	2 cut(s)	82, 1334
PscI	ACATGT	1 cut(s)	1611
PshBI	ATTAAT	1 cut(s)	9
Psp6I	CCWGG	3 cut(s)	162, 415, 479
PspGI	CCWGG	3 cut(s)	162, 415, 479
PspN4I	GGNNCC	5 cut(s)	602, 733, 1540, 1743, 1874
PspPI	GGNCC	1 cut(s)	1314
PsrI	GAACNNNNNNTAC	2 cut(s)	1507, 1539
PstI	CTGCAG	1 cut(s)	307
PvuII	CAGCTG	1 cut(s)	1771
RsaI	GTAC	8 cut(s)	376, 726, 1021, 1101, 1356, 1516, 1874, 1886
RsaNI	GTAC	8 cut(s)	375, 725, 1020, 1100, 1355, 1515, 1873, 1885
RseI	CAYNNNNRTG	3 cut(s)	179, 332, 386
SapI	GCTCTTC	1 cut(s)	1481
SaqAI	TTAA	9 cut(s)	9, 144, 593, 660, 918, 936, 1347, 1388, 1893
SatI	GCNGC	6 cut(s)	74, 306, 542, 891, 1810, 1880
Sau3AI	GATC	5 cut(s)	320, 525, 1224, 1465, 1817
Sau96I	GGNCC	1 cut(s)	1314
ScaI	AGTACT	1 cut(s)	1516
SchI	GAGTC	2 cut(s)	82, 1334
ScrFI	CCNGG	4 cut(s)	164, 417, 481, 1300
SduI	GDGCHC	2 cut(s)	951, 1804
SfaNI	GCATC	1 cut(s)	1350
SfcI	CTRYAG	1 cut(s)	303
SinI	GGWCC	1 cut(s)	1314
SmiMI	CAYNNNNRTG	3 cut(s)	179, 332, 386
SmlI	CTYRAG	2 cut(s)	944, 1346
SmoI	CTYRAG	2 cut(s)	944, 1346
SsiI	CCGC	4 cut(s)	225, 1739, 1810, 1879
SspI	AATATT	3 cut(s)	117, 697, 805
SspMI	CTAG	5 cut(s)	311, 681, 717, 846, 1169
StyD4I	CCNGG	4 cut(s)	162, 415, 479, 1298
StyI	CCWWGG	2 cut(s)	425, 456
TaaI	ACNGT	8 cut(s)	62, 101, 385, 833, 1116, 1222, 1436, 1554
TaiI	ACGT	2 cut(s)	1109, 1239
TaqI	TCGA	4 cut(s)	1230, 1366, 1447, 1637
TatI	WGTACW	3 cut(s)	724, 1099, 1514
TauI	GCSGC	2 cut(s)	1812, 1882
TfiI	GAWTC	3 cut(s)	636, 927, 1279
Tru1I	TTAA	9 cut(s)	9, 144, 593, 660, 918, 936, 1347, 1388, 1893
Tru9I	TTAA	9 cut(s)	9, 144, 593, 660, 918, 936, 1347, 1388, 1893
TscAI	CASTG	4 cut(s)	106, 388, 1227, 1559
TseI	GCWGC	4 cut(s)	73, 305, 541, 890
TspRI	CASTG	4 cut(s)	106, 388, 1227, 1559
Van91I	CCANNNNNTGG	1 cut(s)	1719
Vha464I	CTTAAG	1 cut(s)	1346
VpaK11BI	GGWCC	1 cut(s)	1314
VspI	ATTAAT	1 cut(s)	9
XapI	RAATTY	4 cut(s)	149, 363, 1006, 1715
XceI	RCATGY	1 cut(s)	1615
XcmI	CCANNNNNNNNNTGG	1 cut(s)	423
XmiI	GTMKAC	1 cut(s)	1850
XmnI	GAANNNNTTC	1 cut(s)	1762
XspI	CTAG	5 cut(s)	311, 681, 717, 846, 1169
ZrmI	AGTACT	1 cut(s)	1516
Zsp2I	ATGCAT	1 cut(s)	351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.