Rmu_sc0004948.1_g000017

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004948.1
Physical Location & Seq
Forward (+)
47680 .. 50331
2652 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004948.1_g000017.1.cds

Sequence Viewer

Length: 1878 bp
atgcataccacatctttgggaacatttctaaatgagtggcgtgctgcggtggattctgaagcaaaaaagtcaggaaagtcaggtttgctcttgacaatggcactttatcatcatatgcaggttatggacaccatgacttatccgattgactcaattaagaagaacttgaattgggttcatcttgtggcatatgattactatcttccgaaagaggaaaacttcacacaccctcatgctgctttgtatgacccaatatcaaatgggactaacacgaatagccgtgttaaggacttgataagcagaggactaccggctagcaagctggttttaggcttgccttaccatggttatggttggactcttgtgaataccaacgactataatgttggtgcagcggcatcaggtcctgcggttaccatagacgggtccatggcctataagtacatcaaatggttcattaagacatatggatatggtgcagttcctatgtacaatgacacttatgtggtgaattactgcacaattgggtcaagttggattgattttgatgatgtagaggctatcagcgcgaaagtttcttatgctaagaagatggggcttcttggctacagtgtgtttcaagttggcaatgatgacaattgggttctctctagggcagcagctcaaaaggaaggaggtcaacagaacgagaaacggttagtggtgattgttctggtcacaattgctatgattatcctactgggaacaatgatgtgttacctacagaggagagtactcaagtcaattgggattatagacaacataaaaagatcagtttataggctattaaatatagttccaggtacagacagtcttgacggcaatgctcctaatctacaagtatttagttatgcaaccatcaaagcagctacaaacaacttttcaagtcaaaataagcttggagagggtggctttggacctgtatacaagggtacattaaggaagggtcagcaaatagcagtgaaaagactttctaaaacttcaaaccaaggccttgaagagtttcaaaatgaggttacacttactgcaacactgcaccacgtgaatctagttagagttctgggatattgcaccaagagggaagaaaagatgctggtatatgagtacatgccaaacaagagcttggatcactacctttttgatccaagtagtagtaatcttttggattggaagcaacgtgtccacatcattgaaggggtaattcaagggctcctgtatctccaagaatactcaaactctacaataattcaccgtgatctgaaagcaagcaacattctgttagatgatgagatgaagccaaaaatatcagattttggtctagccagagctttcagaaagaatgaacatgaggcaaacactggtcgcattgtaggaacatatggctatgttcctcctgaatatgtaagaagaggcatttattccatgaaatacgatgtttacagctttggtgttctgcttctgcaaatcataagtggcaagagaagttcatgtttttatggcctagatggaaatttaaacattctagaacacgcatatgagttgtggagagaaggccaaggcatggatttcatagatccaacccttgatgattcgacttcgtcttgcaagctcttaagatgcatggtggttgccttattatgtgtccaagaaaatccagtagatagaccatccatgctggaggtttgttcaatgctcaagagtgaaatttcagccatcattagtcctaaaaagcctgctttctcggttaagaaggatgaagatgaggatcatatatacaaattcagggaagaaatctattcagtcaatgatgcaacaatgtcggaaattgtgccccgatga

Protein Analysis

625

Amino Acids

70.38

Weight (kDa)

7.59

Isoelectric Point (pI)

39.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 109
AccB7I CCANNNNNTGG 1 cut(s) 1600
AccI GTMKAC 1 cut(s) 963
AccII CGCG 1 cut(s) 569
AciI CCGC 3 cut(s) 47, 395, 410
AclWI GGATC 4 cut(s) 1173, 1175, 1607, 1812
AcsI RAATTY 3 cut(s) 1549, 1743, 1817
AcuI CTGAAG 1 cut(s) 78
AcvI CACGTG 1 cut(s) 1081
AdeI CACNNNGTG 1 cut(s) 1081
AfaI GTAC 6 cut(s) 443, 491, 774, 844, 973, 1145
AfiI CCNNNNNNNGG 4 cut(s) 286, 344, 423, 1600
AflII CTTAAG 1 cut(s) 1651
AflIII ACRYGT 1 cut(s) 1216
AgsI TTSAA 9 cut(s) 169, 620, 924, 1023, 1037, 1046, 1232, 1244, 1728
AjnI CCWGG 1 cut(s) 838
AleI CACNNNNGTG 1 cut(s) 503
AluBI AGCT 8 cut(s) 322, 662, 908, 937, 1161, 1367, 1482, 1648
AluI AGCT 8 cut(s) 322, 662, 908, 937, 1161, 1367, 1482, 1648
AlwI GGATC 4 cut(s) 1173, 1175, 1607, 1812
AlwNI CAGNNNCTG 1 cut(s) 407
AoxI GGCC 4 cut(s) 432, 1030, 1537, 1591
ApeKI GCWGC 6 cut(s) 44, 236, 392, 656, 659, 905
ApoI RAATTY 3 cut(s) 1549, 1743, 1817
Asp700I GAANNNNTTC 1 cut(s) 1041
AspLEI GCGC 1 cut(s) 569
AspS9I GGNCC 3 cut(s) 404, 426, 956
AsuHPI GGTGA 3 cut(s) 520, 715, 1280
AsuNHI GCTAGC 1 cut(s) 314
AvaII GGWCC 3 cut(s) 404, 426, 956
BaeGI GKGCMC 1 cut(s) 1872
BanII GRGCYC 1 cut(s) 1251
BbrPI CACGTG 1 cut(s) 1081
BbvI GCAGC 6 cut(s) 31, 223, 404, 668, 671, 917
BccI CCATC 5 cut(s) 586, 905, 1538, 1714, 1760
BceAI ACGGC 2 cut(s) 264, 874
BcgI CGANNNNNNTGC 2 cut(s) 1839, 1873
BciT130I CCWGG 1 cut(s) 840
BfaI CTAG 6 cut(s) 315, 651, 1088, 1358, 1541, 1562
BfmI CTRYAG 2 cut(s) 607, 761
BfrI CTTAAG 1 cut(s) 1651
BfuAI ACCTGC 1 cut(s) 109
BisI GCNGC 7 cut(s) 45, 237, 393, 396, 657, 660, 906
BlsI GCNGC 7 cut(s) 46, 238, 394, 397, 658, 661, 907
BmcAI AGTACT 1 cut(s) 774
Bme1390I CCNGG 1 cut(s) 840
Bme18I GGWCC 3 cut(s) 404, 426, 956
BmgT120I GGNCC 3 cut(s) 404, 426, 956
BmiI GGNNCC 2 cut(s) 427, 1250
BmrFI CCNGG 1 cut(s) 840
BmrI ACTGGG 1 cut(s) 749
BmsI GCATC 4 cut(s) 407, 1119, 1646, 1837
BmtI GCTAGC 1 cut(s) 318
BmuI ACTGGG 1 cut(s) 749
BpmI CTGGAG 1 cut(s) 1736
BpuEI CTTGAG 2 cut(s) 761, 1718
BsaAI YACGTR 1 cut(s) 1081
BsaBI GATNNNNATC 2 cut(s) 198, 1803
BsaJI CCNNGG 4 cut(s) 343, 429, 1027, 1594
Bsc4I CCNNNNNNNGG 4 cut(s) 286, 344, 423, 1600
Bse118I RCCGGY 1 cut(s) 310
Bse1I ACTGG 3 cut(s) 744, 1402, 1694
Bse3DI GCAATG 2 cut(s) 634, 868
Bse8I GATNNNNATC 2 cut(s) 198, 1803
BseBI CCWGG 1 cut(s) 840
BseDI CCNNGG 4 cut(s) 343, 429, 1027, 1594
BseGI GGATG 2 cut(s) 1706, 1798
BseJI GATNNNNATC 2 cut(s) 198, 1803
BseLI CCNNNNNNNGG 4 cut(s) 286, 344, 423, 1600
BseMI GCAATG 2 cut(s) 634, 868
BseNI ACTGG 3 cut(s) 744, 1402, 1694
BseRI GAGGAG 1 cut(s) 781
BseSI GKGCMC 1 cut(s) 1872
BseXI GCAGC 6 cut(s) 31, 223, 404, 668, 671, 917
BsgI GTGCAG 4 cut(s) 411, 498, 502, 1058
Bsh1236I CGCG 1 cut(s) 569
BshFI GGCC 4 cut(s) 434, 1032, 1539, 1593
BsiSI CCGG 1 cut(s) 311
BslFI GGGAC 1 cut(s) 277
BslI CCNNNNNNNGG 4 cut(s) 286, 344, 423, 1600
BsmFI GGGAC 1 cut(s) 277
BsnI GGCC 4 cut(s) 434, 1032, 1539, 1593
Bsp1286I GDGCHC 2 cut(s) 1251, 1872
Bsp1407I TGTACA 1 cut(s) 489
Bsp143I GATC 6 cut(s) 809, 1165, 1180, 1294, 1612, 1804
Bsp19I CCATGG 2 cut(s) 343, 429
BspACI CCGC 3 cut(s) 47, 395, 410
BspANI GGCC 4 cut(s) 434, 1032, 1539, 1593
BspFNI CGCG 1 cut(s) 569
BspLI GGNNCC 2 cut(s) 427, 1250
BspMI ACCTGC 1 cut(s) 109
BspOI GCTAGC 1 cut(s) 318
BspPI GGATC 4 cut(s) 1173, 1175, 1607, 1812
BspTI CTTAAG 1 cut(s) 1651
BsrDI GCAATG 2 cut(s) 634, 868
BsrFI RCCGGY 1 cut(s) 310
BsrGI TGTACA 1 cut(s) 489
BsrI ACTGG 3 cut(s) 744, 1402, 1694
BssAI RCCGGY 1 cut(s) 310
BssECI CCNNGG 4 cut(s) 343, 429, 1027, 1594
BssMI GATC 6 cut(s) 809, 1165, 1180, 1294, 1612, 1804
BssNAI GTATAC 1 cut(s) 964
BssT1I CCWWGG 4 cut(s) 343, 429, 1027, 1594
Bst1107I GTATAC 1 cut(s) 964
Bst2UI CCWGG 1 cut(s) 840
Bst4CI ACNGT 4 cut(s) 611, 696, 851, 1292
Bst6I CTCTTC 2 cut(s) 1032, 1441
BstAFI CTTAAG 1 cut(s) 1651
BstAUI TGTACA 1 cut(s) 489
BstBAI YACGTR 1 cut(s) 1081
BstC8I GCNNGC 7 cut(s) 42, 316, 320, 335, 1306, 1646, 1773
BstDEI CTNAG 1 cut(s) 585
BstDSI CCRYGG 2 cut(s) 343, 429
BstEII GGTNACC 1 cut(s) 412
BstF5I GGATG 2 cut(s) 1706, 1798
BstFNI CGCG 1 cut(s) 569
BstHHI GCGC 1 cut(s) 569
BstKTI GATC 6 cut(s) 812, 1168, 1183, 1297, 1615, 1807
BstMBI GATC 6 cut(s) 809, 1165, 1180, 1294, 1612, 1804
BstMWI GCNNNNNNNGC 1 cut(s) 566
BstNI CCWGG 1 cut(s) 840
BstNSI RCATGY 1 cut(s) 1150
BstPI GGTNACC 1 cut(s) 412
BstSCI CCNGG 1 cut(s) 838
BstSFI CTRYAG 2 cut(s) 607, 761
BstSLI GKGCMC 1 cut(s) 1872
BstUI CGCG 1 cut(s) 569
BstV1I GCAGC 6 cut(s) 31, 223, 404, 668, 671, 917
BstX2I RGATCY 1 cut(s) 1612
BstXI CCANNNNNNTGG 2 cut(s) 16, 350
BstYI RGATCY 1 cut(s) 1612
BstZ17I GTATAC 1 cut(s) 964
BsuRI GGCC 4 cut(s) 434, 1032, 1539, 1593
BtgI CCRYGG 2 cut(s) 343, 429
BtsCI GGATG 2 cut(s) 1706, 1798
BtsI GCAGTG 2 cut(s) 1005, 1070
BtsIMutI CAGTG 4 cut(s) 616, 1005, 1070, 1395
BveI ACCTGC 1 cut(s) 109
Cac8I GCNNGC 7 cut(s) 42, 316, 320, 335, 1306, 1646, 1773
CaiI CAGNNNCTG 1 cut(s) 407
CfoI GCGC 1 cut(s) 569
Cfr10I RCCGGY 1 cut(s) 310
Cfr13I GGNCC 3 cut(s) 404, 426, 956
Csp6I GTAC 6 cut(s) 442, 490, 773, 843, 972, 1144
CviQI GTAC 6 cut(s) 442, 490, 773, 843, 972, 1144
DdeI CTNAG 1 cut(s) 585
DpnI GATC 6 cut(s) 811, 1167, 1182, 1296, 1614, 1806
DpnII GATC 6 cut(s) 809, 1165, 1180, 1294, 1612, 1804
DraI TTTAAA 1 cut(s) 1554
DraIII CACNNNGTG 1 cut(s) 1081
Eam1104I CTCTTC 2 cut(s) 1032, 1441
EarI CTCTTC 2 cut(s) 1032, 1441
Eco130I CCWWGG 4 cut(s) 343, 429, 1027, 1594
Eco147I AGGCCT 1 cut(s) 1032
Eco24I GRGCYC 1 cut(s) 1251
Eco47I GGWCC 3 cut(s) 404, 426, 956
Eco57I CTGAAG 1 cut(s) 78
Eco72I CACGTG 1 cut(s) 1081
Eco91I GGTNACC 1 cut(s) 412
EcoO109I RGGNCCY 1 cut(s) 404
EcoO65I GGTNACC 1 cut(s) 412
EcoRII CCWGG 1 cut(s) 838
EcoT14I CCWWGG 4 cut(s) 343, 429, 1027, 1594
EcoT22I ATGCAT 2 cut(s) 6, 1661
EcoT38I GRGCYC 1 cut(s) 1251
ErhI CCWWGG 4 cut(s) 343, 429, 1027, 1594
FalI AAGNNNNNCTT 2 cut(s) 149, 181
FaqI GGGAC 1 cut(s) 277
FauNDI CATATG 5 cut(s) 114, 190, 466, 1417, 1573
FblI GTMKAC 1 cut(s) 963
Fnu4HI GCNGC 7 cut(s) 45, 237, 393, 396, 657, 660, 906
FokI GGATG 2 cut(s) 1693, 1805
FriOI GRGCYC 1 cut(s) 1251
Fsp4HI GCNGC 7 cut(s) 45, 237, 393, 396, 657, 660, 906
FspBI CTAG 6 cut(s) 315, 651, 1088, 1358, 1541, 1562
GlaI GCGC 1 cut(s) 568
GluI GCNGC 7 cut(s) 45, 237, 393, 396, 657, 660, 906
GsuI CTGGAG 1 cut(s) 1736
HaeIII GGCC 4 cut(s) 434, 1032, 1539, 1593
HapII CCGG 1 cut(s) 311
HhaI GCGC 1 cut(s) 569
Hin6I GCGC 1 cut(s) 567
HinP1I GCGC 1 cut(s) 567
HincII GTYRAC 1 cut(s) 680
HindII GTYRAC 1 cut(s) 680
HindIII AAGCTT 1 cut(s) 935
HinfI GANTC 5 cut(s) 53, 149, 358, 1084, 1628
HpaII CCGG 1 cut(s) 311
HphI GGTGA 3 cut(s) 520, 715, 1280
Hpy166II GTNNAC 4 cut(s) 680, 964, 1222, 1477
Hpy188I TCNGA 7 cut(s) 58, 144, 207, 1299, 1348, 1373, 1861
Hpy188III TCNNGA 6 cut(s) 72, 91, 854, 1433, 1562, 1735
Hpy8I GTNNAC 4 cut(s) 680, 964, 1222, 1477
HpyAV CCTTC 5 cut(s) 665, 976, 1226, 1583, 1783
HpyCH4III ACNGT 4 cut(s) 611, 696, 851, 1292
HpyCH4IV ACGT 2 cut(s) 1080, 1216
HpyF10VI GCNNNNNNNGC 1 cut(s) 566
HpyF3I CTNAG 1 cut(s) 585
HpySE526I ACGT 2 cut(s) 1080, 1216
HspAI GCGC 1 cut(s) 567
Kzo9I GATC 6 cut(s) 809, 1165, 1180, 1294, 1612, 1804
LmnI GCTCC 2 cut(s) 871, 1254
Lsp1109I GCAGC 6 cut(s) 31, 223, 404, 668, 671, 917
LweI GCATC 4 cut(s) 407, 1119, 1646, 1837
MaeI CTAG 6 cut(s) 315, 651, 1088, 1358, 1541, 1562
MaeII ACGT 2 cut(s) 1080, 1216
MaeIII GTNAC 4 cut(s) 412, 715, 755, 1054
MalI GATC 6 cut(s) 811, 1167, 1182, 1296, 1614, 1806
MboI GATC 6 cut(s) 809, 1165, 1180, 1294, 1612, 1804
MboII GAAGA 8 cut(s) 172, 194, 601, 1049, 1133, 1458, 1808, 1838
MfeI CAATTG 4 cut(s) 522, 637, 720, 783
MflI RGATCY 1 cut(s) 1612
MhlI GDGCHC 2 cut(s) 1251, 1872
MlyI GAGTC 2 cut(s) 143, 352
MmeI TCCRAC 4 cut(s) 335, 515, 1640, 1839
Mph1103I ATGCAT 2 cut(s) 6, 1661
MroXI GAANNNNTTC 1 cut(s) 1041
MseI TTAA 8 cut(s) 156, 285, 459, 827, 977, 1553, 1652, 1785
MslI CAYNNNNRTG 4 cut(s) 231, 348, 503, 1572
MspA1I CMGCKG 1 cut(s) 395
MspCI CTTAAG 1 cut(s) 1651
MspI CCGG 1 cut(s) 311
MspR9I CCNGG 1 cut(s) 840
MunI CAATTG 4 cut(s) 522, 637, 720, 783
MvaI CCWGG 1 cut(s) 840
MvnI CGCG 1 cut(s) 569
MwoI GCNNNNNNNGC 1 cut(s) 566
NcoI CCATGG 2 cut(s) 343, 429
NdeI CATATG 5 cut(s) 114, 190, 466, 1417, 1573
NdeII GATC 6 cut(s) 809, 1165, 1180, 1294, 1612, 1804
NheI GCTAGC 1 cut(s) 314
NlaIV GGNNCC 2 cut(s) 427, 1250
NmuCI GTSAC 1 cut(s) 715
NsiI ATGCAT 2 cut(s) 6, 1661
NspI RCATGY 1 cut(s) 1150
OliI CACNNNNGTG 1 cut(s) 503
PceI AGGCCT 1 cut(s) 1032
PdmI GAANNNNTTC 1 cut(s) 1041
PfeI GAWTC 3 cut(s) 53, 1084, 1628
PflFI GACNNNGTC 1 cut(s) 1636
PflMI CCANNNNNTGG 1 cut(s) 1600
PkrI GCNGC 7 cut(s) 46, 238, 394, 397, 658, 661, 907
PleI GAGTC 2 cut(s) 143, 352
PmaCI CACGTG 1 cut(s) 1081
PmlI CACGTG 1 cut(s) 1081
PpsI GAGTC 2 cut(s) 143, 352
Ppu21I YACGTR 1 cut(s) 1081
PpuMI RGGWCCY 1 cut(s) 404
Psp5II RGGWCCY 1 cut(s) 404
Psp6I CCWGG 1 cut(s) 838
PspCI CACGTG 1 cut(s) 1081
PspEI GGTNACC 1 cut(s) 412
PspGI CCWGG 1 cut(s) 838
PspN4I GGNNCC 2 cut(s) 427, 1250
PspPI GGNCC 3 cut(s) 404, 426, 956
PspPPI RGGWCCY 1 cut(s) 404
PstNI CAGNNNCTG 1 cut(s) 407
PsuI RGATCY 1 cut(s) 1612
PsyI GACNNNGTC 1 cut(s) 1636
RsaI GTAC 6 cut(s) 443, 491, 774, 844, 973, 1145
RsaNI GTAC 6 cut(s) 442, 490, 773, 843, 972, 1144
RseI CAYNNNNRTG 4 cut(s) 231, 348, 503, 1572
SaqAI TTAA 8 cut(s) 156, 285, 459, 827, 977, 1553, 1652, 1785
SatI GCNGC 7 cut(s) 45, 237, 393, 396, 657, 660, 906
Sau3AI GATC 6 cut(s) 809, 1165, 1180, 1294, 1612, 1804
Sau96I GGNCC 3 cut(s) 404, 426, 956
ScaI AGTACT 1 cut(s) 774
SchI GAGTC 2 cut(s) 143, 352
ScrFI CCNGG 1 cut(s) 840
SduI GDGCHC 2 cut(s) 1251, 1872
SfaNI GCATC 4 cut(s) 407, 1119, 1646, 1837
SfcI CTRYAG 2 cut(s) 607, 761
SinI GGWCC 3 cut(s) 404, 426, 956
SmiMI CAYNNNNRTG 4 cut(s) 231, 348, 503, 1572
SmlI CTYRAG 3 cut(s) 776, 1651, 1733
SmoI CTYRAG 3 cut(s) 776, 1651, 1733
SseBI AGGCCT 1 cut(s) 1032
SsiI CCGC 3 cut(s) 47, 395, 410
SspMI CTAG 6 cut(s) 315, 651, 1088, 1358, 1541, 1562
StuI AGGCCT 1 cut(s) 1032
StyD4I CCNGG 1 cut(s) 838
StyI CCWWGG 4 cut(s) 343, 429, 1027, 1594
TaaI ACNGT 4 cut(s) 611, 696, 851, 1292
TaiI ACGT 2 cut(s) 1083, 1219
TaqI TCGA 1 cut(s) 1631
TatI WGTACW 4 cut(s) 441, 489, 772, 1143
TauI GCSGC 1 cut(s) 398
TfiI GAWTC 3 cut(s) 53, 1084, 1628
Tru1I TTAA 8 cut(s) 156, 285, 459, 827, 977, 1553, 1652, 1785
Tru9I TTAA 8 cut(s) 156, 285, 459, 827, 977, 1553, 1652, 1785
TscAI CASTG 4 cut(s) 616, 1005, 1077, 1402
TseFI GTSAC 1 cut(s) 715
TseI GCWGC 6 cut(s) 44, 236, 392, 656, 659, 905
Tsp45I GTSAC 1 cut(s) 715
TspDTI ATGAA 8 cut(s) 167, 445, 1346, 1395, 1478, 1515, 1597, 1809
TspRI CASTG 4 cut(s) 616, 1005, 1077, 1402
Tth111I GACNNNGTC 1 cut(s) 1636
Van91I CCANNNNNTGG 1 cut(s) 1600
Vha464I CTTAAG 1 cut(s) 1651
VpaK11BI GGWCC 3 cut(s) 404, 426, 956
XapI RAATTY 3 cut(s) 1549, 1743, 1817
XbaI TCTAGA 1 cut(s) 1561
XceI RCATGY 1 cut(s) 1150
XmiI GTMKAC 1 cut(s) 963
XmnI GAANNNNTTC 1 cut(s) 1041
XspI CTAG 6 cut(s) 315, 651, 1088, 1358, 1541, 1562
ZrmI AGTACT 1 cut(s) 774
Zsp2I ATGCAT 2 cut(s) 6, 1661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.