Protein kinase domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1458 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 386 |
| Acc36I | ACCTGC | 1 cut(s) | 1108 |
| AccBSI | CCGCTC | 1 cut(s) | 211 |
| AccI | GTMKAC | 1 cut(s) | 987 |
| AccII | CGCG | 2 cut(s) | 1256, 2311 |
| AclI | AACGTT | 1 cut(s) | 1356 |
| AclWI | GGATC | 4 cut(s) | 1043, 1667, 2099, 2112 |
| AcoI | YGGCCR | 2 cut(s) | 1851, 2312 |
| AcsI | RAATTY | 6 cut(s) | 71, 182, 1343, 1857, 2211, 2259 |
| AcuI | CTGAAG | 3 cut(s) | 588, 1074, 1215 |
| AfaI | GTAC | 8 cut(s) | 299, 620, 684, 711, 1013, 1637, 1760, 1920 |
| AfeI | AGCGCT | 1 cut(s) | 886 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 133, 528, 775, 848, 905, 2027, 2310 |
| AflIII | ACRYGT | 1 cut(s) | 685 |
| AgeI | ACCGGT | 1 cut(s) | 731 |
| AjnI | CCWGG | 2 cut(s) | 875, 1310 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1413, 1445 |
| Alw21I | GWGCWC | 5 cut(s) | 267, 739, 898, 1146, 1662 |
| Alw26I | GTCTC | 5 cut(s) | 36, 361, 1126, 1192, 1270 |
| Alw44I | GTGCAC | 1 cut(s) | 894 |
| AlwI | GGATC | 4 cut(s) | 1043, 1667, 2099, 2112 |
| Aor51HI | AGCGCT | 1 cut(s) | 886 |
| AoxI | GGCC | 6 cut(s) | 475, 1447, 1826, 1851, 2195, 2312 |
| ApaLI | GTGCAC | 1 cut(s) | 894 |
| ApeKI | GCWGC | 8 cut(s) | 158, 177, 554, 608, 743, 1154, 1157, 1160 |
| ApoI | RAATTY | 6 cut(s) | 71, 182, 1343, 1857, 2211, 2259 |
| AsiGI | ACCGGT | 1 cut(s) | 731 |
| AspA2I | CCTAGG | 1 cut(s) | 472 |
| AspLEI | GCGC | 1 cut(s) | 887 |
| AspS9I | GGNCC | 3 cut(s) | 720, 908, 1448 |
| AsuC2I | CCSGG | 2 cut(s) | 650, 665 |
| AsuHPI | GGTGA | 3 cut(s) | 208, 721, 1546 |
| AsuNHI | GCTAGC | 1 cut(s) | 1796 |
| AvaII | GGWCC | 2 cut(s) | 720, 908 |
| AvrII | CCTAGG | 1 cut(s) | 472 |
| BaeGI | GKGCMC | 1 cut(s) | 898 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 769, 802 |
| BalI | TGGCCA | 1 cut(s) | 1853 |
| BamHI | GGATCC | 1 cut(s) | 2104 |
| BanII | GRGCYC | 2 cut(s) | 267, 1662 |
| BauI | CACGAG | 1 cut(s) | 1241 |
| BbsI | GAAGAC | 2 cut(s) | 2046, 2292 |
| Bbv12I | GWGCWC | 5 cut(s) | 267, 739, 898, 1146, 1662 |
| BbvCI | CCTCAGC | 1 cut(s) | 714 |
| BbvI | GCAGC | 8 cut(s) | 145, 189, 566, 595, 755, 1144, 1166, 1172 |
| BccI | CCATC | 5 cut(s) | 346, 1400, 1469, 1788, 2336 |
| BceAI | ACGGC | 2 cut(s) | 37, 596 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 129, 163 |
| BciT130I | CCWGG | 2 cut(s) | 877, 1312 |
| BciVI | GTATCC | 2 cut(s) | 76, 1097 |
| BcnI | CCSGG | 2 cut(s) | 650, 665 |
| BcoDI | GTCTC | 5 cut(s) | 36, 361, 1126, 1192, 1270 |
| BfaI | CTAG | 4 cut(s) | 473, 479, 1797, 2054 |
| BfmI | CTRYAG | 3 cut(s) | 1158, 1224, 1991 |
| BfoI | RGCGCY | 1 cut(s) | 888 |
| BfuAI | ACCTGC | 1 cut(s) | 1108 |
| BfuI | GTATCC | 2 cut(s) | 76, 1097 |
| BglII | AGATCT | 2 cut(s) | 1786, 1833 |
| BlnI | CCTAGG | 1 cut(s) | 472 |
| BlpI | GCTNAGC | 2 cut(s) | 866, 1247 |
| BmcAI | AGTACT | 3 cut(s) | 299, 1013, 1760 |
| Bme1390I | CCNGG | 4 cut(s) | 650, 665, 877, 1312 |
| Bme18I | GGWCC | 2 cut(s) | 720, 908 |
| BmgT120I | GGNCC | 3 cut(s) | 720, 908, 1448 |
| BmiI | GGNNCC | 2 cut(s) | 1450, 2106 |
| BmrFI | CCNGG | 4 cut(s) | 650, 665, 877, 1312 |
| BmrI | ACTGGG | 1 cut(s) | 688 |
| BmsI | GCATC | 5 cut(s) | 1039, 1611, 1804, 2138, 2326 |
| BmtI | GCTAGC | 1 cut(s) | 1800 |
| BmuI | ACTGGG | 1 cut(s) | 688 |
| BpiI | GAAGAC | 2 cut(s) | 2046, 2292 |
| BpmI | CTGGAG | 1 cut(s) | 1908 |
| Bpu10I | CCTNAGC | 4 cut(s) | 714, 770, 1083, 1296 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 866, 1247 |
| BpuEI | CTTGAG | 3 cut(s) | 1149, 1503, 1747 |
| BpuMI | CCSGG | 2 cut(s) | 650, 665 |
| Bsa29I | ATCGAT | 2 cut(s) | 757, 1023 |
| BsaAI | YACGTR | 2 cut(s) | 709, 1918 |
| BsaI | GGTCTC | 1 cut(s) | 1126 |
| BsaJI | CCNNGG | 8 cut(s) | 288, 399, 472, 875, 876, 921, 1311, 2309 |
| BsaWI | WCCGGW | 1 cut(s) | 731 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1079, 1109 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 133, 528, 775, 848, 905, 2027, 2310 |
| Bse118I | RCCGGY | 2 cut(s) | 731, 898 |
| Bse1I | ACTGG | 3 cut(s) | 170, 683, 831 |
| Bse3DI | GCAATG | 3 cut(s) | 17, 1186, 1380 |
| BseBI | CCWGG | 2 cut(s) | 877, 1312 |
| BseCI | ATCGAT | 2 cut(s) | 757, 1023 |
| BseDI | CCNNGG | 8 cut(s) | 288, 399, 472, 875, 876, 921, 1311, 2309 |
| BseGI | GGATG | 4 cut(s) | 254, 1776, 1876, 2097 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 133, 528, 775, 848, 905, 2027, 2310 |
| BseMI | GCAATG | 3 cut(s) | 17, 1186, 1380 |
| BseMII | CTCAG | 3 cut(s) | 728, 1748, 2361 |
| BseNI | ACTGG | 3 cut(s) | 170, 683, 831 |
| BseRI | GAGGAG | 1 cut(s) | 1544 |
| BseSI | GKGCMC | 1 cut(s) | 898 |
| BseXI | GCAGC | 8 cut(s) | 145, 189, 566, 595, 755, 1144, 1166, 1172 |
| BsgI | GTGCAG | 2 cut(s) | 635, 1265 |
| Bsh1236I | CGCG | 2 cut(s) | 1256, 2311 |
| Bsh1285I | CGRYCG | 2 cut(s) | 757, 761 |
| BshFI | GGCC | 6 cut(s) | 477, 1449, 1828, 1853, 2197, 2314 |
| BshTI | ACCGGT | 1 cut(s) | 731 |
| BshVI | ATCGAT | 2 cut(s) | 757, 1023 |
| BsiEI | CGRYCG | 2 cut(s) | 757, 761 |
| BsiHKAI | GWGCWC | 5 cut(s) | 267, 739, 898, 1146, 1662 |
| BsiSI | CCGG | 4 cut(s) | 650, 664, 732, 899 |
| BslFI | GGGAC | 3 cut(s) | 680, 893, 1752 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 133, 528, 775, 848, 905, 2027, 2310 |
| BsmAI | GTCTC | 5 cut(s) | 36, 361, 1126, 1192, 1270 |
| BsmBI | CGTCTC | 2 cut(s) | 36, 361 |
| BsmFI | GGGAC | 3 cut(s) | 680, 893, 1752 |
| BsmI | GAATGC | 1 cut(s) | 2020 |
| BsnI | GGCC | 6 cut(s) | 477, 1449, 1828, 1853, 2197, 2314 |
| Bso31I | GGTCTC | 1 cut(s) | 1126 |
| Bsp1286I | GDGCHC | 5 cut(s) | 267, 739, 898, 1146, 1662 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 866, 1247 |
| Bsp19I | CCATGG | 1 cut(s) | 399 |
| BspANI | GGCC | 6 cut(s) | 477, 1449, 1828, 1853, 2197, 2314 |
| BspCNI | CTCAG | 3 cut(s) | 727, 1747, 2360 |
| BspDI | ATCGAT | 2 cut(s) | 757, 1023 |
| BspFNI | CGCG | 2 cut(s) | 1256, 2311 |
| BspLI | GGNNCC | 2 cut(s) | 1450, 2106 |
| BspMAI | CTGCAG | 1 cut(s) | 1162 |
| BspMI | ACCTGC | 1 cut(s) | 1108 |
| BspOI | GCTAGC | 1 cut(s) | 1800 |
| BspPI | GGATC | 4 cut(s) | 1043, 1667, 2099, 2112 |
| BspQI | GCTCTTC | 2 cut(s) | 218, 418 |
| BspTNI | GGTCTC | 1 cut(s) | 1126 |
| BsrBI | CCGCTC | 1 cut(s) | 211 |
| BsrDI | GCAATG | 3 cut(s) | 17, 1186, 1380 |
| BsrFI | RCCGGY | 2 cut(s) | 731, 898 |
| BsrI | ACTGG | 3 cut(s) | 170, 683, 831 |
| BssAI | RCCGGY | 2 cut(s) | 731, 898 |
| BssECI | CCNNGG | 8 cut(s) | 288, 399, 472, 875, 876, 921, 1311, 2309 |
| BssSI | CACGAG | 1 cut(s) | 1241 |
| BssT1I | CCWWGG | 3 cut(s) | 399, 472, 921 |
| Bst2BI | CACGAG | 1 cut(s) | 1241 |
| Bst2UI | CCWGG | 2 cut(s) | 877, 1312 |
| Bst4CI | ACNGT | 3 cut(s) | 322, 386, 1016 |
| Bst6I | CTCTTC | 4 cut(s) | 218, 274, 418, 537 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1096 |
| BstBAI | YACGTR | 2 cut(s) | 709, 1918 |
| BstC8I | GCNNGC | 3 cut(s) | 552, 1798, 2153 |
| BstDEI | CTNAG | 9 cut(s) | 714, 770, 866, 1083, 1247, 1296, 1734, 1830, 2347 |
| BstDSI | CCRYGG | 2 cut(s) | 399, 2309 |
| BstF5I | GGATG | 4 cut(s) | 254, 1776, 1876, 2097 |
| BstFNI | CGCG | 2 cut(s) | 1256, 2311 |
| BstH2I | RGCGCY | 1 cut(s) | 888 |
| BstHHI | GCGC | 1 cut(s) | 887 |
| BstMAI | GTCTC | 5 cut(s) | 36, 361, 1126, 1192, 1270 |
| BstMCI | CGRYCG | 2 cut(s) | 757, 761 |
| BstNI | CCWGG | 2 cut(s) | 877, 1312 |
| BstNSI | RCATGY | 2 cut(s) | 689, 1642 |
| BstSCI | CCNGG | 4 cut(s) | 648, 663, 875, 1310 |
| BstSFI | CTRYAG | 3 cut(s) | 1158, 1224, 1991 |
| BstSLI | GKGCMC | 1 cut(s) | 898 |
| BstSNI | TACGTA | 2 cut(s) | 709, 1918 |
| BstUI | CGCG | 2 cut(s) | 1256, 2311 |
| BstV1I | GCAGC | 8 cut(s) | 145, 189, 566, 595, 755, 1144, 1166, 1172 |
| BstV2I | GAAGAC | 2 cut(s) | 2046, 2292 |
| BstX2I | RGATCY | 3 cut(s) | 1786, 1833, 2104 |
| BstYI | RGATCY | 3 cut(s) | 1786, 1833, 2104 |
| Bsu15I | ATCGAT | 2 cut(s) | 757, 1023 |
| BsuI | GTATCC | 2 cut(s) | 76, 1097 |
| BsuRI | GGCC | 6 cut(s) | 477, 1449, 1828, 1853, 2197, 2314 |
| BsuTUI | ATCGAT | 2 cut(s) | 757, 1023 |
| BtgI | CCRYGG | 2 cut(s) | 399, 2309 |
| BtgZI | GCGATG | 1 cut(s) | 947 |
| BtsCI | GGATG | 4 cut(s) | 254, 1776, 1876, 2097 |
| BtsIMutI | CAGTG | 2 cut(s) | 593, 960 |
| BveI | ACCTGC | 1 cut(s) | 1108 |
| Cac8I | GCNNGC | 3 cut(s) | 552, 1798, 2153 |
| CfoI | GCGC | 1 cut(s) | 887 |
| Cfr10I | RCCGGY | 2 cut(s) | 731, 898 |
| Cfr13I | GGNCC | 3 cut(s) | 720, 908, 1448 |
| Cfr42I | CCGCGG | 1 cut(s) | 2312 |
| ClaI | ATCGAT | 2 cut(s) | 757, 1023 |
| CseI | GACGC | 1 cut(s) | 871 |
| Csp6I | GTAC | 8 cut(s) | 298, 619, 683, 710, 1012, 1636, 1759, 1919 |
| CspAI | ACCGGT | 1 cut(s) | 731 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 582, 617 |
| CviAII | CATG | 9 cut(s) | 400, 517, 686, 740, 795, 971, 1549, 1613, 1639 |
| CviQI | GTAC | 8 cut(s) | 298, 619, 683, 710, 1012, 1636, 1759, 1919 |
| DdeI | CTNAG | 9 cut(s) | 714, 770, 866, 1083, 1247, 1296, 1734, 1830, 2347 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 386 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 386 |
| EaeI | YGGCCR | 2 cut(s) | 1851, 2312 |
| Eam1104I | CTCTTC | 4 cut(s) | 218, 274, 418, 537 |
| EarI | CTCTTC | 4 cut(s) | 218, 274, 418, 537 |
| Ecl136II | GAGCTC | 2 cut(s) | 265, 1660 |
| Eco105I | TACGTA | 2 cut(s) | 709, 1918 |
| Eco130I | CCWWGG | 3 cut(s) | 399, 472, 921 |
| Eco147I | AGGCCT | 3 cut(s) | 477, 1828, 2197 |
| Eco24I | GRGCYC | 2 cut(s) | 267, 1662 |
| Eco31I | GGTCTC | 1 cut(s) | 1126 |
| Eco47I | GGWCC | 2 cut(s) | 720, 908 |
| Eco47III | AGCGCT | 1 cut(s) | 886 |
| Eco53kI | GAGCTC | 2 cut(s) | 265, 1660 |
| Eco57I | CTGAAG | 3 cut(s) | 588, 1074, 1215 |
| EcoICRI | GAGCTC | 2 cut(s) | 265, 1660 |
| EcoO109I | RGGNCCY | 1 cut(s) | 908 |
| EcoRI | GAATTC | 1 cut(s) | 182 |
| EcoRII | CCWGG | 2 cut(s) | 875, 1310 |
| EcoT14I | CCWWGG | 3 cut(s) | 399, 472, 921 |
| EcoT22I | ATGCAT | 1 cut(s) | 2065 |
| EcoT38I | GRGCYC | 2 cut(s) | 267, 1662 |
| ErhI | CCWWGG | 3 cut(s) | 399, 472, 921 |
| Esp3I | CGTCTC | 2 cut(s) | 36, 361 |
| FaeI | CATG | 9 cut(s) | 403, 520, 689, 743, 798, 974, 1552, 1616, 1642 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1637, 1669 |
| FaqI | GGGAC | 3 cut(s) | 680, 893, 1752 |
| FatI | CATG | 9 cut(s) | 399, 516, 685, 739, 794, 970, 1548, 1612, 1638 |
| FauI | CCCGC | 1 cut(s) | 2116 |
| FauNDI | CATATG | 1 cut(s) | 1909 |
| FblI | GTMKAC | 1 cut(s) | 987 |
| FokI | GGATG | 4 cut(s) | 241, 1763, 1883, 2104 |
| FriOI | GRGCYC | 2 cut(s) | 267, 1662 |
| FspBI | CTAG | 4 cut(s) | 473, 479, 1797, 2054 |
| GlaI | GCGC | 1 cut(s) | 886 |
| GsuI | CTGGAG | 1 cut(s) | 1908 |
| HaeII | RGCGCY | 1 cut(s) | 888 |
| HaeIII | GGCC | 6 cut(s) | 477, 1449, 1828, 1853, 2197, 2314 |
| HapII | CCGG | 4 cut(s) | 650, 664, 732, 899 |
| HgaI | GACGC | 1 cut(s) | 871 |
| HhaI | GCGC | 1 cut(s) | 887 |
| Hin1II | CATG | 9 cut(s) | 403, 520, 689, 743, 798, 974, 1552, 1616, 1642 |
| Hin6I | GCGC | 1 cut(s) | 885 |
| HinP1I | GCGC | 1 cut(s) | 885 |
| HincII | GTYRAC | 1 cut(s) | 247 |
| HindII | GTYRAC | 1 cut(s) | 247 |
| HindIII | AAGCTT | 4 cut(s) | 1427, 1509, 1651, 2319 |
| HinfI | GANTC | 6 cut(s) | 123, 437, 635, 656, 1025, 1711 |
| HpaI | GTTAAC | 1 cut(s) | 247 |
| HpaII | CCGG | 4 cut(s) | 650, 664, 732, 899 |
| HphI | GGTGA | 3 cut(s) | 208, 721, 1546 |
| Hpy166II | GTNNAC | 4 cut(s) | 247, 896, 988, 1969 |
| Hpy188III | TCNNGA | 6 cut(s) | 1166, 1537, 1764, 1784, 1925, 2177 |
| Hpy8I | GTNNAC | 4 cut(s) | 247, 896, 988, 1969 |
| HpyAV | CCTTC | 8 cut(s) | 141, 283, 319, 649, 1718, 2081, 2208, 2228 |
| HpyCH4III | ACNGT | 3 cut(s) | 322, 386, 1016 |
| HpyCH4IV | ACGT | 5 cut(s) | 708, 1356, 1389, 1917, 1932 |
| HpyF3I | CTNAG | 9 cut(s) | 714, 770, 866, 1083, 1247, 1296, 1734, 1830, 2347 |
| HpySE526I | ACGT | 5 cut(s) | 708, 1356, 1389, 1917, 1932 |
| Hsp92II | CATG | 9 cut(s) | 403, 520, 689, 743, 798, 974, 1552, 1616, 1642 |
| HspAI | GCGC | 1 cut(s) | 885 |
| KspAI | GTTAAC | 1 cut(s) | 247 |
| KspI | CCGCGG | 1 cut(s) | 2312 |
| LguI | GCTCTTC | 2 cut(s) | 218, 418 |
| LmnI | GCTCC | 6 cut(s) | 292, 929, 1087, 1256, 1657, 2237 |
| Lsp1109I | GCAGC | 8 cut(s) | 145, 189, 566, 595, 755, 1144, 1166, 1172 |
| LweI | GCATC | 5 cut(s) | 1039, 1611, 1804, 2138, 2326 |
| MaeI | CTAG | 4 cut(s) | 473, 479, 1797, 2054 |
| MaeII | ACGT | 5 cut(s) | 708, 1356, 1389, 1917, 1932 |
| MaeIII | GTNAC | 5 cut(s) | 343, 764, 1262, 1729, 1913 |
| MbiI | CCGCTC | 1 cut(s) | 211 |
| MflI | RGATCY | 3 cut(s) | 1786, 1833, 2104 |
| MhlI | GDGCHC | 5 cut(s) | 267, 739, 898, 1146, 1662 |
| MlsI | TGGCCA | 1 cut(s) | 1853 |
| MluNI | TGGCCA | 1 cut(s) | 1853 |
| MlyI | GAGTC | 1 cut(s) | 644 |
| MmeI | TCCRAC | 6 cut(s) | 151, 219, 306, 907, 1882, 2187 |
| Mox20I | TGGCCA | 1 cut(s) | 1853 |
| Mph1103I | ATGCAT | 1 cut(s) | 2065 |
| MscI | TGGCCA | 1 cut(s) | 1853 |
| MseI | TTAA | 3 cut(s) | 246, 1935, 2045 |
| Msp20I | TGGCCA | 1 cut(s) | 1853 |
| MspA1I | CMGCKG | 5 cut(s) | 718, 1157, 1337, 1490, 2311 |
| MspI | CCGG | 4 cut(s) | 650, 664, 732, 899 |
| MspR9I | CCNGG | 4 cut(s) | 650, 665, 877, 1312 |
| Mva1269I | GAATGC | 1 cut(s) | 2020 |
| MvaI | CCWGG | 2 cut(s) | 877, 1312 |
| MvnI | CGCG | 2 cut(s) | 1256, 2311 |
| NciI | CCSGG | 2 cut(s) | 650, 665 |
| NcoI | CCATGG | 1 cut(s) | 399 |
| NdeI | CATATG | 1 cut(s) | 1909 |
| NheI | GCTAGC | 1 cut(s) | 1796 |
| NlaIII | CATG | 9 cut(s) | 403, 520, 689, 743, 798, 974, 1552, 1616, 1642 |
| NlaIV | GGNNCC | 2 cut(s) | 1450, 2106 |
| NmuCI | GTSAC | 2 cut(s) | 343, 764 |
| NsiI | ATGCAT | 1 cut(s) | 2065 |
| NspI | RCATGY | 2 cut(s) | 689, 1642 |
| PasI | CCCWGGG | 1 cut(s) | 876 |
| PceI | AGGCCT | 3 cut(s) | 477, 1828, 2197 |
| PciI | ACATGT | 1 cut(s) | 685 |
| PciSI | GCTCTTC | 2 cut(s) | 218, 418 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1353 |
| PctI | GAATGC | 1 cut(s) | 2020 |
| PfeI | GAWTC | 5 cut(s) | 123, 437, 656, 1025, 1711 |
| PflFI | GACNNNGTC | 1 cut(s) | 983 |
| PfoI | TCCNGGA | 1 cut(s) | 663 |
| PinAI | ACCGGT | 1 cut(s) | 731 |
| Ple19I | CGATCG | 2 cut(s) | 757, 761 |
| PleI | GAGTC | 1 cut(s) | 643 |
| PpsI | GAGTC | 1 cut(s) | 643 |
| Ppu21I | YACGTR | 2 cut(s) | 709, 1918 |
| PpuMI | RGGWCCY | 1 cut(s) | 908 |
| PscI | ACATGT | 1 cut(s) | 685 |
| PsiI | TTATAA | 1 cut(s) | 1458 |
| Psp124BI | GAGCTC | 2 cut(s) | 267, 1662 |
| Psp1406I | AACGTT | 1 cut(s) | 1356 |
| Psp5II | RGGWCCY | 1 cut(s) | 908 |
| Psp6I | CCWGG | 2 cut(s) | 875, 1310 |
| PspGI | CCWGG | 2 cut(s) | 875, 1310 |
| PspN4I | GGNNCC | 2 cut(s) | 1450, 2106 |
| PspPI | GGNCC | 3 cut(s) | 720, 908, 1448 |
| PspPPI | RGGWCCY | 1 cut(s) | 908 |
| PstI | CTGCAG | 1 cut(s) | 1162 |
| PsuI | RGATCY | 3 cut(s) | 1786, 1833, 2104 |
| PsyI | GACNNNGTC | 1 cut(s) | 983 |
| PvuI | CGATCG | 2 cut(s) | 757, 761 |
| PvuII | CAGCTG | 2 cut(s) | 1157, 1337 |
| RsaI | GTAC | 8 cut(s) | 299, 620, 684, 711, 1013, 1637, 1760, 1920 |
| RsaNI | GTAC | 8 cut(s) | 298, 619, 683, 710, 1012, 1636, 1759, 1919 |
| SacI | GAGCTC | 2 cut(s) | 267, 1662 |
| SacII | CCGCGG | 1 cut(s) | 2312 |
| SapI | GCTCTTC | 2 cut(s) | 218, 418 |
| SaqAI | TTAA | 3 cut(s) | 246, 1935, 2045 |
| Sau96I | GGNCC | 3 cut(s) | 720, 908, 1448 |
| ScaI | AGTACT | 3 cut(s) | 299, 1013, 1760 |
| SchI | GAGTC | 1 cut(s) | 644 |
| ScrFI | CCNGG | 4 cut(s) | 650, 665, 877, 1312 |
| SduI | GDGCHC | 5 cut(s) | 267, 739, 898, 1146, 1662 |
| SfaNI | GCATC | 5 cut(s) | 1039, 1611, 1804, 2138, 2326 |
| SfcI | CTRYAG | 3 cut(s) | 1158, 1224, 1991 |
| Sfr303I | CCGCGG | 1 cut(s) | 2312 |
| SgrAI | CRCCGGYG | 1 cut(s) | 731 |
| SgrBI | CCGCGG | 1 cut(s) | 2312 |
| SinI | GGWCC | 2 cut(s) | 720, 908 |
| SmlI | CTYRAG | 3 cut(s) | 1164, 1518, 1762 |
| SmoI | CTYRAG | 3 cut(s) | 1164, 1518, 1762 |
| SnaBI | TACGTA | 2 cut(s) | 709, 1918 |
| SseBI | AGGCCT | 3 cut(s) | 477, 1828, 2197 |
| SspI | AATATT | 1 cut(s) | 1374 |
| SspMI | CTAG | 4 cut(s) | 473, 479, 1797, 2054 |
| SstI | GAGCTC | 2 cut(s) | 267, 1662 |
| StuI | AGGCCT | 3 cut(s) | 477, 1828, 2197 |
| StyD4I | CCNGG | 4 cut(s) | 648, 663, 875, 1310 |
| StyI | CCWWGG | 3 cut(s) | 399, 472, 921 |
| TaaI | ACNGT | 3 cut(s) | 322, 386, 1016 |
| TaiI | ACGT | 5 cut(s) | 711, 1359, 1392, 1920, 1935 |
| TatI | WGTACW | 5 cut(s) | 297, 618, 1011, 1635, 1758 |
| TauI | GCSGC | 2 cut(s) | 1400, 2314 |
| TfiI | GAWTC | 5 cut(s) | 123, 437, 656, 1025, 1711 |
| Tru1I | TTAA | 3 cut(s) | 246, 1935, 2045 |
| Tru9I | TTAA | 3 cut(s) | 246, 1935, 2045 |
| TscAI | CASTG | 2 cut(s) | 600, 967 |
| TseFI | GTSAC | 2 cut(s) | 343, 764 |
| TseI | GCWGC | 8 cut(s) | 158, 177, 554, 608, 743, 1154, 1157, 1160 |
| Tsp45I | GTSAC | 2 cut(s) | 343, 764 |
| TspDTI | ATGAA | 7 cut(s) | 421, 1099, 1704, 1887, 2052, 2108, 2247 |
| TspGWI | ACGGA | 4 cut(s) | 18, 791, 1210, 1259 |
| TspRI | CASTG | 2 cut(s) | 600, 967 |
| Tth111I | GACNNNGTC | 1 cut(s) | 983 |
| VneI | GTGCAC | 1 cut(s) | 894 |
| VpaK11BI | GGWCC | 2 cut(s) | 720, 908 |
| XapI | RAATTY | 6 cut(s) | 71, 182, 1343, 1857, 2211, 2259 |
| XceI | RCATGY | 2 cut(s) | 689, 1642 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 829 |
| XmaJI | CCTAGG | 1 cut(s) | 472 |
| XmiI | GTMKAC | 1 cut(s) | 987 |
| XspI | CTAG | 4 cut(s) | 473, 479, 1797, 2054 |
| ZrmI | AGTACT | 3 cut(s) | 299, 1013, 1760 |
| Zsp2I | ATGCAT | 1 cut(s) | 2065 |