Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000775

Physical Location & Seq

Genomic Coordinates Forward (+)

1199172 .. 1202249

Gene Structure 3078 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G001400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2346 bp

ATGTTGTTGAGAATGCAATACCATTTATCAATAGCTACCAAAGTTCTCCTCCTCTCTCTCTTTTCTATGAACTTCAATTGTTCAAACACTCAGTCATGGATCAAAGCCGGTTACCATTACACCGGTGATGAATTCCCTGTTTCTGACATAGATTCCACATTGTTCACTCACCTTATATGTGGTTTTGCCTTTATAAACTCTTCCACTTACCAGCTCTCAATCAACTCCTCCACCCAACAAGAATTCTCCACTTTCACAAATGTTGTCAAGCGCAAAAACTCAGAAGTCACAGCCTTGCTATCCATCTGGGGTGGAGGAGAAGACTATTCAGTGTTGTTTTCATTGCTGAACCAGTCTTCTCACCGGAGATCTTTCATTGAATCTTCAATAACGACAGCTAGACTTTATGAGTTTGATGGGCTAGACCTCACGGGGGCTGTACCAAGAACAAGCATGCACACCACATCTTTGGGAACATTTCTAAATGAGTGGCGTGCTGCGGTGGATTCTGAAGCAAAAAAGTCAGGAAAGTCAGGTTTGCTCTTGACAATGGCACTTCATCATCATATGCAGGTTATGGATACGGTGACTTATCCCATTGACTCAATTAAGAAGAACTTGAATTGGGCTCATCTTGGGGCATATGATTACTATCTTCCTAAAGAGGAAAACTTCACACACCCTCATGCTGCTTTATATGACCCAATAACAAATGGGACTAATACGAATAGTCGTGTTAAGGACTTGATAAGCAGAGGACTACCTGCTAGCAAGCTTGTTTTAGGCTTGCCTTACCATGGTTATGGTTGGACTCTTGTGAATCCCAGCGACAATAACGTTGGTGCAGCGGCATCAGGTCCTGCGGTTACCATAGACGGGTCCATGGCCTATAAGTACATCAAATGGTTCATTAAGACATATGGATATGGTGCAGTTCCTATGTACAATGACACTTATGTGGTGAATTACTGCACAATTGGGTCAAGTTGGATTAATTTTGATGATGTAGAGGCTATCAAGGCGAAAGTTTCTTACGCTAAGAAGATGGGACTTCTTGGCTACAATGTGTTTCAAGTTGGCAATGATGACAATTGGGTGCTCTCTAGGGCAGCAGCTCAAAAGGAAGGAGGTCAACAGAACAAGAAACGGTTAGTAGTGATTGTTCTGGTCACAATTGCTATGATTATCCTACTGGGAACAATGATGTGTTACCTACAAAGGAGAGTACTCAAGTCAATTGGGATTATAGACAACATCAAAAGATCAGTTTACAGGCTATTGAATATAGTTCCAGGTACAGACAGTTTTCACAGCAATGCTCCTAATCTGCAAGTATTCAATTATACAACCATCAAGGAGGCTACAAATAACTTTTCGAGTCAGAATAAGCTTGGAGAGGGTGGCTTTGGACCTGTATACAAGGGTACATTAAGGAAGGGTCAGCAAATAGCAGTGAAAAGACTTTCGAAAACTTCAAACCAAGGCCTTGAAGAGTTTCAAAATGAGGTTACACTTACTGCAACACTGCACCATGTGAATCTAGTTAGAGTTCTGGGATATTGCACCAAGAGGGAAGAAAAGATGCTGGTATATGAGTACATGCCAAACAAGAGCTTGGATCACTACCTCTTTGATCCAAGTAGACGCAACCTTTTGGATTGGGAGCAACGTGTCCACATCATTGAAGGGGTAATTCAAGGGCTTCTATATCTCCAAGAATACTCGAACTCTACAATAATTCACCGTGATCTGAAAGCAAGCAACATTCTGTTAGATGATGAGATGAACCCGAAAATATCAGATTTTGGTCTAGCCAGAGCTTTCAGAAAGAGTGAACATGAGGCAAACACTGGTCGCATTGTAGGAACATATGGCTATGTTCCCCCTGAATATGTAAGAAGAGGCATTTATTCCATGAAATACGATGTTTACAGCTTCGGTGTTCTGCTTCTGCAAATCATAAGTGGCAAGAGAAGTTCATGTTTTTATGGCTTAGATGGAAATTTAAACATTCTAGAACACGCATATGAGTTGTGGAGAGAAGGCCAAGGCATGGATTTCATAGATCCAACCCTAGATGATTCGACTTCGTCTTGCAAGCTCTTAAGATGCATGGAAGTAGCCTTGTTATGTGTCCAAGAAAATCCAGTAGATAGACCGTCCATGCTGGAGGTTTCTTCGATGCTTAAGAGCGAAACTGCAGTCGTCATTAGTCCTAAAAAGCCTGCTTTCTCAGTTCAGAAGGATGAAGATGAGGATCATATATATATATATTCAGGGAAGAAATCTATTCAGTTAATGATGCAACAATGTCCGAAATTGTGCCCCGATGACAATTCTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

Glyco_hydro_18 Pkinase Pkinase_Tyr

Protein Analysis

781

Amino Acids

88.01

Weight (kDa)

7.87

Isoelectric Point (pI)

38.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_18	PF00704	47 - 362	2.5e-52	Glycosyl hydrolases family 18
Pkinase	PF00069	459 - 725	5.5e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	460 - 728	2.7e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000775)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g01350 FvH4_1g01363 FvH4_1g01365 FvH4_1g01383 FvH4_1g01390 FvH4_1g01420
malus_domestica	MD02G1011200.v1.1 MD02G1011400.v1.1 MD15G1156200.v1.1 MD15G1156300.v1.1 MD15G1156600.v1.1 MD15G1156700.v1.1 MD15G1156900.v1.1 MD15G1157000.v1.1
prunus_persica	Prupe.7G258600_v2.0.a1 Prupe.7G258700_v2.0.a1 Prupe.7G258700_v2.0.a1 Prupe.7G258800_v2.0.a1 Prupe.7G258900_v2.0.a1
pyrus_communis	pycom02g01010 pycom02g01020 pycom14g14440 pycom15g14020 pycom15g14030 pycom15g14050 pycom15g14060 pycom15g14080
rosa_chinensis	RchiOBHm_Chr2g0086191 RchiOBHm_Chr2g0086211 RchiOBHm_Chr2g0086231 RchiOBHm_Chr2g0086261 RchiOBHm_Chr2g0086281 RchiOBHm_Chr2g0086301 RchiOBHm_Chr2g0086311 RchiOBHm_Chr2g0086321 RchiOBHm_Chr2g0160801 RchiOBHm_Chr6g0247981 RchiOBHm_Chr6g0247991
rosa_laevigata	RLG00000015749
rosa_multiflora	Rmu_co8497771.1_g000001 Rmu_sc0004510.1_g000014 Rmu_sc0004510.1_g000018 Rmu_sc0004948.1_g000005 Rmu_sc0004948.1_g000017 Rmu_sc0004948.1_g000018 Rmu_sc0004948.1_g000024
rosa_roxburghii	Rroxscaffold_2G00154700 Rroxscaffold_2G00154710
rosa_rugosa	Rorug01G0466400 Rorug01G0466500 Rorug05G0529900
rosa_samantha	Rh2AG016200 Rh2AG016300 Rh2AG016500 Rh2AG016700 Rh2BG016300 Rh2BG016400 Rh2BG016500 Rh2CG017200 Rh2CG017300 Rh2CG017400 Rh2CG017500 Rh2CG017600 Rh2DG018200 Rh2DG018300 Rh6AG044800 Rh6BG039800
rosa_wichuraiana	Rw0G015400 Rw2G001400 Rw2G001410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	194
Acc36I	ACCTGC	2 cut(s)	562, 772
AccB7I	CCANNNNNTGG	1 cut(s)	2053
AccI	GTMKAC	2 cut(s)	1416, 1642
AciI	CCGC	3 cut(s)	500, 848, 863
AclI	AACGTT	1 cut(s)	837
AclWI	GGATC	5 cut(s)	107, 1626, 1628, 2060, 2265
AcsI	RAATTY	3 cut(s)	131, 242, 2002
AcuI	CTGAAG	1 cut(s)	531
AdeI	CACNNNGTG	1 cut(s)	1534
AfaI	GTAC	7 cut(s)	441, 896, 944, 1227, 1297, 1426, 1598
AfiI	CCNNNNNNNGG	4 cut(s)	433, 797, 876, 2053
AflII	CTTAAG	2 cut(s)	2104, 2186
AflIII	ACRYGT	1 cut(s)	1669
AgeI	ACCGGT	1 cut(s)	122
AjnI	CCWGG	1 cut(s)	1291
AleI	CACNNNNGTG	1 cut(s)	956
Alw21I	GWGCWC	1 cut(s)	1101
AlwI	GGATC	5 cut(s)	107, 1626, 1628, 2060, 2265
AlwNI	CAGNNNCTG	1 cut(s)	860
AoxI	GGCC	3 cut(s)	885, 1483, 2044
ApeKI	GCWGC	5 cut(s)	497, 689, 845, 1109, 1112
ApoI	RAATTY	3 cut(s)	131, 242, 2002
ArsI	GACNNNNNNTTYG	4 cut(s)	77, 109, 2187, 2219
AseI	ATTAAT	1 cut(s)	993
AsiGI	ACCGGT	1 cut(s)	122
Asp700I	GAANNNNTTC	1 cut(s)	1494
AspLEI	GCGC	1 cut(s)	273
AspS9I	GGNCC	3 cut(s)	857, 879, 1409
AsuHPI	GGTGA	6 cut(s)	137, 161, 353, 598, 973, 1733
AsuII	TTCGAA	1 cut(s)	1466
AsuNHI	GCTAGC	1 cut(s)	767
AvaII	GGWCC	3 cut(s)	857, 879, 1409
BaeGI	GKGCMC	1 cut(s)	2327
BanII	GRGCYC	1 cut(s)	631
BbsI	GAAGAC	2 cut(s)	327, 348
Bbv12I	GWGCWC	1 cut(s)	1101
BbvI	GCAGC	5 cut(s)	484, 676, 857, 1121, 1124
BccI	CCATC	5 cut(s)	311, 410, 1039, 1358, 1991
BciT130I	CCWGG	1 cut(s)	1293
BciVI	GTATCC	1 cut(s)	574
BfaI	CTAG	8 cut(s)	399, 422, 768, 1104, 1541, 1811, 2015, 2075
BfmI	CTRYAG	1 cut(s)	2199
BfrI	CTTAAG	2 cut(s)	2104, 2186
BfuAI	ACCTGC	2 cut(s)	562, 772
BfuI	GTATCC	1 cut(s)	574
BglII	AGATCT	1 cut(s)	368
BisI	GCNGC	6 cut(s)	498, 690, 846, 849, 1110, 1113
BlsI	GCNGC	6 cut(s)	499, 691, 847, 850, 1111, 1114
BmcAI	AGTACT	1 cut(s)	1227
Bme1390I	CCNGG	1 cut(s)	1293
Bme18I	GGWCC	3 cut(s)	857, 879, 1409
BmgT120I	GGNCC	3 cut(s)	857, 879, 1409
BmiI	GGNNCC	1 cut(s)	880
BmrFI	CCNGG	1 cut(s)	1293
BmrI	ACTGGG	1 cut(s)	1202
BmsI	GCATC	5 cut(s)	860, 1572, 2099, 2172, 2292
BmtI	GCTAGC	1 cut(s)	771
BmuI	ACTGGG	1 cut(s)	1202
BpiI	GAAGAC	2 cut(s)	327, 348
BpmI	CTGGAG	1 cut(s)	2189
Bpu14I	TTCGAA	1 cut(s)	1466
BpuEI	CTTGAG	1 cut(s)	1214
BsaBI	GATNNNNATC	2 cut(s)	651, 2256
BsaJI	CCNNGG	4 cut(s)	796, 882, 1480, 2047
BsaWI	WCCGGW	2 cut(s)	122, 363
Bsc4I	CCNNNNNNNGG	4 cut(s)	433, 797, 876, 2053
Bse118I	RCCGGY	2 cut(s)	107, 122
Bse1I	ACTGG	4 cut(s)	352, 1197, 1855, 2147
Bse3DI	GCAATG	3 cut(s)	341, 1087, 1321
Bse8I	GATNNNNATC	2 cut(s)	651, 2256
BseBI	CCWGG	1 cut(s)	1293
BseDI	CCNNGG	4 cut(s)	796, 882, 1480, 2047
BseGI	GGATG	1 cut(s)	2251
BseJI	GATNNNNATC	2 cut(s)	651, 2256
BseLI	CCNNNNNNNGG	4 cut(s)	433, 797, 876, 2053
BseMI	GCAATG	3 cut(s)	341, 1087, 1321
BseMII	CTCAG	3 cut(s)	104, 294, 2247
BseNI	ACTGG	4 cut(s)	352, 1197, 1855, 2147
BseRI	GAGGAG	4 cut(s)	38, 41, 217, 330
BseSI	GKGCMC	1 cut(s)	2327
BseXI	GCAGC	5 cut(s)	484, 676, 857, 1121, 1124
BseYI	CCCAGC	1 cut(s)	824
BsgI	GTGCAG	4 cut(s)	864, 951, 955, 1511
BshFI	GGCC	3 cut(s)	887, 1485, 2046
BshTI	ACCGGT	1 cut(s)	122
BsiHKAI	GWGCWC	1 cut(s)	1101
BsiSI	CCGG	3 cut(s)	108, 123, 364
BslFI	GGGAC	2 cut(s)	730, 1062
BslI	CCNNNNNNNGG	4 cut(s)	433, 797, 876, 2053
BsmFI	GGGAC	2 cut(s)	730, 1062
BsmI	GAATGC	1 cut(s)	18
BsnI	GGCC	3 cut(s)	887, 1485, 2046
Bsp119I	TTCGAA	1 cut(s)	1466
Bsp1286I	GDGCHC	3 cut(s)	631, 1101, 2327
Bsp1407I	TGTACA	1 cut(s)	942
Bsp143I	GATC	8 cut(s)	99, 368, 1262, 1618, 1633, 1747, 2065, 2257
Bsp19I	CCATGG	2 cut(s)	796, 882
BspACI	CCGC	3 cut(s)	500, 848, 863
BspANI	GGCC	3 cut(s)	887, 1485, 2046
BspCNI	CTCAG	3 cut(s)	103, 293, 2246
BspLI	GGNNCC	1 cut(s)	880
BspMAI	CTGCAG	1 cut(s)	2203
BspMI	ACCTGC	2 cut(s)	562, 772
BspOI	GCTAGC	1 cut(s)	771
BspPI	GGATC	5 cut(s)	107, 1626, 1628, 2060, 2265
BspT104I	TTCGAA	1 cut(s)	1466
BspTI	CTTAAG	2 cut(s)	2104, 2186
BsrDI	GCAATG	3 cut(s)	341, 1087, 1321
BsrFI	RCCGGY	2 cut(s)	107, 122
BsrGI	TGTACA	1 cut(s)	942
BsrI	ACTGG	4 cut(s)	352, 1197, 1855, 2147
BssAI	RCCGGY	2 cut(s)	107, 122
BssECI	CCNNGG	4 cut(s)	796, 882, 1480, 2047
BssMI	GATC	8 cut(s)	99, 368, 1262, 1618, 1633, 1747, 2065, 2257
BssNAI	GTATAC	1 cut(s)	1417
BssT1I	CCWWGG	4 cut(s)	796, 882, 1480, 2047
Bst1107I	GTATAC	1 cut(s)	1417
Bst2UI	CCWGG	1 cut(s)	1293
Bst4CI	ACNGT	5 cut(s)	586, 1149, 1304, 1745, 2160
Bst6I	CTCTTC	3 cut(s)	205, 1485, 1894
BstAFI	CTTAAG	2 cut(s)	2104, 2186
BstAUI	TGTACA	1 cut(s)	942
BstBI	TTCGAA	1 cut(s)	1466
BstC8I	GCNNGC	8 cut(s)	455, 495, 769, 773, 788, 1759, 2099, 2226
BstDEI	CTNAG	5 cut(s)	90, 280, 1038, 1993, 2233
BstDSI	CCRYGG	2 cut(s)	796, 882
BstEII	GGTNACC	2 cut(s)	110, 865
BstF5I	GGATG	1 cut(s)	2251
BstHHI	GCGC	1 cut(s)	273
BstKTI	GATC	8 cut(s)	102, 371, 1265, 1621, 1636, 1750, 2068, 2260
BstMBI	GATC	8 cut(s)	99, 368, 1262, 1618, 1633, 1747, 2065, 2257
BstMWI	GCNNNNNNNGC	1 cut(s)	1019
BstNI	CCWGG	1 cut(s)	1293
BstNSI	RCATGY	2 cut(s)	457, 1603
BstPI	GGTNACC	2 cut(s)	110, 865
BstSCI	CCNGG	1 cut(s)	1291
BstSFI	CTRYAG	1 cut(s)	2199
BstSLI	GKGCMC	1 cut(s)	2327
BstV1I	GCAGC	5 cut(s)	484, 676, 857, 1121, 1124
BstV2I	GAAGAC	2 cut(s)	327, 348
BstX2I	RGATCY	2 cut(s)	368, 2065
BstXI	CCANNNNNNTGG	2 cut(s)	469, 803
BstYI	RGATCY	2 cut(s)	368, 2065
BstZ17I	GTATAC	1 cut(s)	1417
BsuI	GTATCC	1 cut(s)	574
BsuRI	GGCC	3 cut(s)	887, 1485, 2046
BtgI	CCRYGG	2 cut(s)	796, 882
BtsCI	GGATG	1 cut(s)	2251
BtsI	GCAGTG	2 cut(s)	1458, 1523
BtsIMutI	CAGTG	4 cut(s)	336, 1458, 1523, 1848
BveI	ACCTGC	2 cut(s)	562, 772
Cac8I	GCNNGC	8 cut(s)	455, 495, 769, 773, 788, 1759, 2099, 2226
CaiI	CAGNNNCTG	1 cut(s)	860
CfoI	GCGC	1 cut(s)	273
Cfr10I	RCCGGY	2 cut(s)	107, 122
Cfr13I	GGNCC	3 cut(s)	857, 879, 1409
CseI	GACGC	1 cut(s)	1653
Csp6I	GTAC	7 cut(s)	440, 895, 943, 1226, 1296, 1425, 1597
CspAI	ACCGGT	1 cut(s)	122
CviQI	GTAC	7 cut(s)	440, 895, 943, 1226, 1296, 1425, 1597
DdeI	CTNAG	5 cut(s)	90, 280, 1038, 1993, 2233
DpnI	GATC	8 cut(s)	101, 370, 1264, 1620, 1635, 1749, 2067, 2259
DpnII	GATC	8 cut(s)	99, 368, 1262, 1618, 1633, 1747, 2065, 2257
DraI	TTTAAA	1 cut(s)	2007
DraIII	CACNNNGTG	1 cut(s)	1534
Eam1104I	CTCTTC	3 cut(s)	205, 1485, 1894
EarI	CTCTTC	3 cut(s)	205, 1485, 1894
Eco130I	CCWWGG	4 cut(s)	796, 882, 1480, 2047
Eco147I	AGGCCT	1 cut(s)	1485
Eco24I	GRGCYC	1 cut(s)	631
Eco47I	GGWCC	3 cut(s)	857, 879, 1409
Eco57I	CTGAAG	1 cut(s)	531
Eco91I	GGTNACC	2 cut(s)	110, 865
EcoO109I	RGGNCCY	1 cut(s)	857
EcoO65I	GGTNACC	2 cut(s)	110, 865
EcoRI	GAATTC	2 cut(s)	131, 242
EcoRII	CCWGG	1 cut(s)	1291
EcoT14I	CCWWGG	4 cut(s)	796, 882, 1480, 2047
EcoT22I	ATGCAT	1 cut(s)	2114
EcoT38I	GRGCYC	1 cut(s)	631
ErhI	CCWWGG	4 cut(s)	796, 882, 1480, 2047
FalI	AAGNNNNNCTT	2 cut(s)	602, 634
FaqI	GGGAC	2 cut(s)	730, 1062
FauNDI	CATATG	5 cut(s)	567, 643, 919, 1870, 2026
FblI	GTMKAC	2 cut(s)	1416, 1642
Fnu4HI	GCNGC	6 cut(s)	498, 690, 846, 849, 1110, 1113
FokI	GGATG	1 cut(s)	2258
FriOI	GRGCYC	1 cut(s)	631
Fsp4HI	GCNGC	6 cut(s)	498, 690, 846, 849, 1110, 1113
FspBI	CTAG	8 cut(s)	399, 422, 768, 1104, 1541, 1811, 2015, 2075
GlaI	GCGC	1 cut(s)	272
GluI	GCNGC	6 cut(s)	498, 690, 846, 849, 1110, 1113
GsaI	CCCAGC	1 cut(s)	828
GsuI	CTGGAG	1 cut(s)	2189
HaeIII	GGCC	3 cut(s)	887, 1485, 2046
HapII	CCGG	3 cut(s)	108, 123, 364
HgaI	GACGC	1 cut(s)	1653
HhaI	GCGC	1 cut(s)	273
Hin6I	GCGC	1 cut(s)	271
HinP1I	GCGC	1 cut(s)	271
HincII	GTYRAC	1 cut(s)	1133
HindII	GTYRAC	1 cut(s)	1133
HindIII	AAGCTT	2 cut(s)	773, 1388
HinfI	GANTC	9 cut(s)	152, 380, 506, 602, 811, 820, 1378, 1537, 2081
HpaII	CCGG	3 cut(s)	108, 123, 364
HphI	GGTGA	6 cut(s)	137, 161, 353, 598, 973, 1733
Hpy166II	GTNNAC	8 cut(s)	165, 1133, 1270, 1417, 1643, 1675, 1835, 1930
Hpy188III	TCNNGA	3 cut(s)	525, 544, 2015
Hpy8I	GTNNAC	8 cut(s)	165, 1133, 1270, 1417, 1643, 1675, 1835, 1930
HpyAV	CCTTC	5 cut(s)	1118, 1429, 1679, 2036, 2236
HpyCH4III	ACNGT	5 cut(s)	586, 1149, 1304, 1745, 2160
HpyCH4IV	ACGT	2 cut(s)	837, 1669
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1019
HpyF3I	CTNAG	5 cut(s)	90, 280, 1038, 1993, 2233
HpySE526I	ACGT	2 cut(s)	837, 1669
HspAI	GCGC	1 cut(s)	271
Kzo9I	GATC	8 cut(s)	99, 368, 1262, 1618, 1633, 1747, 2065, 2257
LmnI	GCTCC	2 cut(s)	1324, 1663
Lsp1109I	GCAGC	5 cut(s)	484, 676, 857, 1121, 1124
LweI	GCATC	5 cut(s)	860, 1572, 2099, 2172, 2292
MaeI	CTAG	8 cut(s)	399, 422, 768, 1104, 1541, 1811, 2015, 2075
MaeII	ACGT	2 cut(s)	837, 1669
MaeIII	GTNAC	7 cut(s)	110, 286, 586, 865, 1168, 1208, 1507
MalI	GATC	8 cut(s)	101, 370, 1264, 1620, 1635, 1749, 2067, 2259
MboI	GATC	8 cut(s)	99, 368, 1262, 1618, 1633, 1747, 2065, 2257
MfeI	CAATTG	5 cut(s)	76, 975, 1090, 1173, 1236
MflI	RGATCY	2 cut(s)	368, 2065
MhlI	GDGCHC	3 cut(s)	631, 1101, 2327
MlyI	GAGTC	3 cut(s)	596, 805, 1387
MmeI	TCCRAC	3 cut(s)	788, 968, 2093
Mph1103I	ATGCAT	1 cut(s)	2114
MroXI	GAANNNNTTC	1 cut(s)	1494
MseI	TTAA	9 cut(s)	609, 738, 912, 993, 1430, 2006, 2105, 2187, 2297
MslI	CAYNNNNRTG	5 cut(s)	684, 801, 956, 1314, 2025
MspA1I	CMGCKG	1 cut(s)	848
MspCI	CTTAAG	2 cut(s)	2104, 2186
MspI	CCGG	3 cut(s)	108, 123, 364
MspR9I	CCNGG	1 cut(s)	1293
MunI	CAATTG	5 cut(s)	76, 975, 1090, 1173, 1236
Mva1269I	GAATGC	1 cut(s)	18
MvaI	CCWGG	1 cut(s)	1293
MwoI	GCNNNNNNNGC	1 cut(s)	1019
NcoI	CCATGG	2 cut(s)	796, 882
NdeI	CATATG	5 cut(s)	567, 643, 919, 1870, 2026
NdeII	GATC	8 cut(s)	99, 368, 1262, 1618, 1633, 1747, 2065, 2257
NheI	GCTAGC	1 cut(s)	767
NlaIV	GGNNCC	1 cut(s)	880
NmuCI	GTSAC	3 cut(s)	286, 586, 1168
NsiI	ATGCAT	1 cut(s)	2114
NspI	RCATGY	2 cut(s)	457, 1603
NspV	TTCGAA	1 cut(s)	1466
OliI	CACNNNNGTG	1 cut(s)	956
PaeI	GCATGC	1 cut(s)	457
PceI	AGGCCT	1 cut(s)	1485
PctI	GAATGC	1 cut(s)	18
PdmI	GAANNNNTTC	1 cut(s)	1494
PfeI	GAWTC	6 cut(s)	152, 380, 506, 820, 1537, 2081
PflFI	GACNNNGTC	1 cut(s)	2089
PflMI	CCANNNNNTGG	1 cut(s)	2053
PinAI	ACCGGT	1 cut(s)	122
PkrI	GCNGC	6 cut(s)	499, 691, 847, 850, 1111, 1114
PleI	GAGTC	3 cut(s)	596, 805, 1386
PpsI	GAGTC	3 cut(s)	596, 805, 1386
PpuMI	RGGWCCY	1 cut(s)	857
PshBI	ATTAAT	1 cut(s)	993
PsiI	TTATAA	1 cut(s)	194
Psp1406I	AACGTT	1 cut(s)	837
Psp5II	RGGWCCY	1 cut(s)	857
Psp6I	CCWGG	1 cut(s)	1291
PspEI	GGTNACC	2 cut(s)	110, 865
PspFI	CCCAGC	1 cut(s)	824
PspGI	CCWGG	1 cut(s)	1291
PspN4I	GGNNCC	1 cut(s)	880
PspPI	GGNCC	3 cut(s)	857, 879, 1409
PspPPI	RGGWCCY	1 cut(s)	857
PsrI	GAACNNNNNNTAC	2 cut(s)	1146, 1178
PstI	CTGCAG	1 cut(s)	2203
PstNI	CAGNNNCTG	1 cut(s)	860
PsuI	RGATCY	2 cut(s)	368, 2065
PsyI	GACNNNGTC	1 cut(s)	2089
RsaI	GTAC	7 cut(s)	441, 896, 944, 1227, 1297, 1426, 1598
RsaNI	GTAC	7 cut(s)	440, 895, 943, 1226, 1296, 1425, 1597
RseI	CAYNNNNRTG	5 cut(s)	684, 801, 956, 1314, 2025
SaqAI	TTAA	9 cut(s)	609, 738, 912, 993, 1430, 2006, 2105, 2187, 2297
SatI	GCNGC	6 cut(s)	498, 690, 846, 849, 1110, 1113
Sau3AI	GATC	8 cut(s)	99, 368, 1262, 1618, 1633, 1747, 2065, 2257
Sau96I	GGNCC	3 cut(s)	857, 879, 1409
ScaI	AGTACT	1 cut(s)	1227
SchI	GAGTC	3 cut(s)	596, 805, 1387
ScrFI	CCNGG	1 cut(s)	1293
SduI	GDGCHC	3 cut(s)	631, 1101, 2327
SfaNI	GCATC	5 cut(s)	860, 1572, 2099, 2172, 2292
SfcI	CTRYAG	1 cut(s)	2199
SfuI	TTCGAA	1 cut(s)	1466
SgrAI	CRCCGGYG	1 cut(s)	122
SinI	GGWCC	3 cut(s)	857, 879, 1409
SmiMI	CAYNNNNRTG	5 cut(s)	684, 801, 956, 1314, 2025
SmlI	CTYRAG	3 cut(s)	1229, 2104, 2186
SmoI	CTYRAG	3 cut(s)	1229, 2104, 2186
SphI	GCATGC	1 cut(s)	457
SseBI	AGGCCT	1 cut(s)	1485
SsiI	CCGC	3 cut(s)	500, 848, 863
SspMI	CTAG	8 cut(s)	399, 422, 768, 1104, 1541, 1811, 2015, 2075
StuI	AGGCCT	1 cut(s)	1485
StyD4I	CCNGG	1 cut(s)	1291
StyI	CCWWGG	4 cut(s)	796, 882, 1480, 2047
TaaI	ACNGT	5 cut(s)	586, 1149, 1304, 1745, 2160
TaiI	ACGT	2 cut(s)	840, 1672
TaqI	TCGA	5 cut(s)	1376, 1466, 1724, 2084, 2180
TatI	WGTACW	4 cut(s)	894, 942, 1225, 1596
TauI	GCSGC	1 cut(s)	851
TfiI	GAWTC	6 cut(s)	152, 380, 506, 820, 1537, 2081
Tru1I	TTAA	9 cut(s)	609, 738, 912, 993, 1430, 2006, 2105, 2187, 2297
Tru9I	TTAA	9 cut(s)	609, 738, 912, 993, 1430, 2006, 2105, 2187, 2297
TscAI	CASTG	4 cut(s)	336, 1458, 1530, 1855
TseFI	GTSAC	3 cut(s)	286, 586, 1168
TseI	GCWGC	5 cut(s)	497, 689, 845, 1109, 1112
Tsp45I	GTSAC	3 cut(s)	286, 586, 1168
TspRI	CASTG	4 cut(s)	336, 1458, 1530, 1855
Tth111I	GACNNNGTC	1 cut(s)	2089
Van91I	CCANNNNNTGG	1 cut(s)	2053
Vha464I	CTTAAG	2 cut(s)	2104, 2186
VpaK11BI	GGWCC	3 cut(s)	857, 879, 1409
VspI	ATTAAT	1 cut(s)	993
XapI	RAATTY	3 cut(s)	131, 242, 2002
XbaI	TCTAGA	1 cut(s)	2014
XceI	RCATGY	2 cut(s)	457, 1603
XmiI	GTMKAC	2 cut(s)	1416, 1642
XmnI	GAANNNNTTC	1 cut(s)	1494
XspI	CTAG	8 cut(s)	399, 422, 768, 1104, 1541, 1811, 2015, 2075
ZrmI	AGTACT	1 cut(s)	1227
Zsp2I	ATGCAT	1 cut(s)	2114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.