Rh2CG017200

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
1352876 .. 1355693
2818 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG017200.1

Sequence Viewer

Length: 1479 bp
ATGTTGTTGAAAATGCAATACCATTTATCAATAGCTACCAAAGTTCTCCTCCTCTTTCTCTTTTCTACGAACTTGAATTGTTCAAACACTCAGTCATGGATCAAAGCCGGTTACCATTACCCAGCGGTTGATAATCGATTCTTTGTTTCTGACATAGATTCCACATTGTTCACTCACCTTATATGTGGTTTTGCCCTTATAAACTCTTCCACTTACCAGCTCTCAATCGACTCCTCCACCAAAAAAGAAATCTCCTCTTTCACAAATTTTGTCAAGCGCAAAAACCCAGAAGTCACAGCCTTGCTATCCATCTGGGGTGGAGGAGAAGACTATTCAGTGTTGTTTTCATTGCTGAACCAGTCTTCTCACCGGAGATCTTTCATTGAATCTTCAATAACCACGGCTAGACTTTATGAGTTTGATGGGCTAGACCTTACAGGGGCTGTGCCAAGAACAAGCATGCACACCACATCTTTGGGAACATTTCTAAATGAGTGGCGTGCTGCGGTGGTTTCTGAAGCAAAAAAGTCAGCAAAGTCAGGTTTGCTCTTGACAATGGCACTTTATCATCATATGCAGGTTATGGATACGGTGACTTATCCCATTGACTCAATTAGGAAGAACTTGAATTGGGCTCATCTTCTGGCATATGATTACTATCTTCCTAGAGAGGAAAACTTCACACACCCTCATGCTGCTTTATATGACCCAATATCAAATGGGACTAACACGGATAGTCGTGTTAAGGACTTGATAAGCAGAGGACTACCTGCTAGCAAGCTGGTTTTAGGCTTGCCTTACCATGGTTATGGTTGGACTCTTGTGAATCCCAACGACTATAATGTTGGTGCAGCGGCATCAGGTCCTGCCGTTACCACAGACGGGTCCATGGCCTATAAGTTCATCAAATCGTTCATTAAGACAAATGGATCTGGTGCAGTTCCTATGTACAATGACACTTATGTGGTGAATCACTGCACAATTGGGTCAAGTTGGATTGATTTTGATGATGTAGAGGCTATCAGCGCGAAAGTGTCTTATGCTAAGAAGATGGGGCTTCTTGGCTACAATGTGTTTCAAGTTGGCAATGATGACAATTGGGTTCTCTCTAGGGCAGCAGCTCAAGATGACGGAGGTCAACAGAACAAGAAACGGTTATTGGTCATTGTTCTGGTCACAATTGCTATGATTATTATCCTACTGGGAACAATGATGCGTTACCTACAAAGGAGAGTACTCAAGTCAATTGGGATTACAGACAATATCAAAAGATCAGTTTACAGGCTATTGAATATAGTTCCAGGTACAGACAGTTTTGACAGCAATGCTCCTAATCTGCAAAATCTTTACTTCATATTACTGTCTAAAGTTGGTGCTTTGAAGGAGTATGCTAATAATTGGTGTGAGTTGCATAACATTGACTCGGACTATTTCAGGCATATGAATTGTGGAAAGAAGGCCGAGGCATGGATTTCATAG

Protein Analysis

492

Amino Acids

55.05

Weight (kDa)

8.69

Isoelectric Point (pI)

33.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_18 PF00704 48 - 364 8.6e-52 Glycosyl hydrolases family 18
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 200
Acc36I ACCTGC 2 cut(s) 568, 778
AccII CGCG 1 cut(s) 1028
AciI CCGC 3 cut(s) 125, 506, 854
AclWI GGATC 2 cut(s) 107, 937
AcsI RAATTY 1 cut(s) 265
AcuI CTGAAG 1 cut(s) 537
AfaI GTAC 3 cut(s) 950, 1236, 1306
AfiI CCNNNNNNNGG 4 cut(s) 439, 803, 882, 1467
AgsI TTSAA 9 cut(s) 10, 76, 84, 386, 393, 628, 1079, 1291, 1381
AjnI CCWGG 1 cut(s) 1300
AjuI GAANNNNNNNTTGG 2 cut(s) 1142, 1174
AleI CACNNNNGTG 1 cut(s) 962
AluBI AGCT 4 cut(s) 35, 220, 781, 1121
AluI AGCT 4 cut(s) 35, 220, 781, 1121
AlwI GGATC 2 cut(s) 107, 937
AlwNI CAGNNNCTG 2 cut(s) 443, 866
AoxI GGCC 2 cut(s) 891, 1458
ApeKI GCWGC 5 cut(s) 503, 695, 851, 1115, 1118
ApoI RAATTY 1 cut(s) 265
ArsI GACNNNNNNTTYG 2 cut(s) 77, 109
AspLEI GCGC 2 cut(s) 279, 1028
AspS9I GGNCC 2 cut(s) 863, 885
AsuHPI GGTGA 4 cut(s) 167, 359, 604, 979
AsuNHI GCTAGC 1 cut(s) 773
AvaII GGWCC 2 cut(s) 863, 885
BanII GRGCYC 1 cut(s) 637
BbsI GAAGAC 2 cut(s) 333, 354
BbvI GCAGC 5 cut(s) 490, 682, 863, 1127, 1130
BccI CCATC 3 cut(s) 317, 416, 1045
BceAI ACGGC 2 cut(s) 417, 854
BciT130I CCWGG 1 cut(s) 1302
BciVI GTATCC 1 cut(s) 580
BfaI CTAG 5 cut(s) 405, 428, 666, 774, 1110
BfuAI ACCTGC 2 cut(s) 568, 778
BfuI GTATCC 1 cut(s) 580
BglII AGATCT 1 cut(s) 374
BisI GCNGC 6 cut(s) 504, 696, 852, 855, 1116, 1119
BlsI GCNGC 6 cut(s) 505, 697, 853, 856, 1117, 1120
BmcAI AGTACT 1 cut(s) 1236
Bme1390I CCNGG 1 cut(s) 1302
Bme18I GGWCC 2 cut(s) 863, 885
BmgT120I GGNCC 2 cut(s) 863, 885
BmiI GGNNCC 1 cut(s) 886
BmrFI CCNGG 1 cut(s) 1302
BmrI ACTGGG 1 cut(s) 1211
BmsI GCATC 2 cut(s) 866, 1203
BmtI GCTAGC 1 cut(s) 777
BmuI ACTGGG 1 cut(s) 1211
BoxI GACNNNNGTC 1 cut(s) 1134
BpiI GAAGAC 2 cut(s) 333, 354
BpuEI CTTGAG 2 cut(s) 1107, 1223
Bsa29I ATCGAT 1 cut(s) 136
BsaBI GATNNNNATC 2 cut(s) 657, 1193
BsaJI CCNNGG 4 cut(s) 399, 802, 888, 1461
BsaWI WCCGGW 1 cut(s) 369
Bsc4I CCNNNNNNNGG 4 cut(s) 439, 803, 882, 1467
Bse118I RCCGGY 1 cut(s) 107
Bse1I ACTGG 2 cut(s) 358, 1206
Bse3DI GCAATG 3 cut(s) 347, 1093, 1330
Bse8I GATNNNNATC 2 cut(s) 657, 1193
BseBI CCWGG 1 cut(s) 1302
BseCI ATCGAT 1 cut(s) 136
BseDI CCNNGG 4 cut(s) 399, 802, 888, 1461
BseJI GATNNNNATC 2 cut(s) 657, 1193
BseLI CCNNNNNNNGG 4 cut(s) 439, 803, 882, 1467
BseMI GCAATG 3 cut(s) 347, 1093, 1330
BseMII CTCAG 1 cut(s) 104
BseNI ACTGG 2 cut(s) 358, 1206
BseRI GAGGAG 5 cut(s) 38, 41, 223, 244, 336
BseXI GCAGC 5 cut(s) 490, 682, 863, 1127, 1130
BseYI CCCAGC 1 cut(s) 121
BsgI GTGCAG 3 cut(s) 870, 957, 961
Bsh1236I CGCG 1 cut(s) 1028
BshFI GGCC 2 cut(s) 893, 1460
BshVI ATCGAT 1 cut(s) 136
BsiSI CCGG 2 cut(s) 108, 370
BslFI GGGAC 1 cut(s) 736
BslI CCNNNNNNNGG 4 cut(s) 439, 803, 882, 1467
BsmFI GGGAC 1 cut(s) 736
BsnI GGCC 2 cut(s) 893, 1460
Bsp1286I GDGCHC 1 cut(s) 637
Bsp1407I TGTACA 1 cut(s) 948
Bsp143I GATC 4 cut(s) 99, 374, 929, 1271
Bsp19I CCATGG 2 cut(s) 802, 888
BspACI CCGC 3 cut(s) 125, 506, 854
BspANI GGCC 2 cut(s) 893, 1460
BspCNI CTCAG 1 cut(s) 103
BspDI ATCGAT 1 cut(s) 136
BspFNI CGCG 1 cut(s) 1028
BspLI GGNNCC 1 cut(s) 886
BspMI ACCTGC 2 cut(s) 568, 778
BspOI GCTAGC 1 cut(s) 777
BspPI GGATC 2 cut(s) 107, 937
BsrDI GCAATG 3 cut(s) 347, 1093, 1330
BsrFI RCCGGY 1 cut(s) 107
BsrGI TGTACA 1 cut(s) 948
BsrI ACTGG 2 cut(s) 358, 1206
BssAI RCCGGY 1 cut(s) 107
BssECI CCNNGG 4 cut(s) 399, 802, 888, 1461
BssMI GATC 4 cut(s) 99, 374, 929, 1271
BssT1I CCWWGG 2 cut(s) 802, 888
Bst2UI CCWGG 1 cut(s) 1302
Bst4CI ACNGT 4 cut(s) 592, 1155, 1313, 1362
Bst6I CTCTTC 1 cut(s) 211
BstAUI TGTACA 1 cut(s) 948
BstC8I GCNNGC 5 cut(s) 461, 501, 775, 779, 794
BstDEI CTNAG 2 cut(s) 90, 1044
BstDSI CCRYGG 3 cut(s) 399, 802, 888
BstEII GGTNACC 1 cut(s) 110
BstFNI CGCG 1 cut(s) 1028
BstHHI GCGC 2 cut(s) 279, 1028
BstKTI GATC 4 cut(s) 102, 377, 932, 1274
BstMBI GATC 4 cut(s) 99, 374, 929, 1271
BstMWI GCNNNNNNNGC 1 cut(s) 1025
BstNI CCWGG 1 cut(s) 1302
BstNSI RCATGY 1 cut(s) 463
BstPAI GACNNNNGTC 1 cut(s) 1134
BstPI GGTNACC 1 cut(s) 110
BstSCI CCNGG 1 cut(s) 1300
BstUI CGCG 1 cut(s) 1028
BstV1I GCAGC 5 cut(s) 490, 682, 863, 1127, 1130
BstV2I GAAGAC 2 cut(s) 333, 354
BstX2I RGATCY 2 cut(s) 374, 929
BstXI CCANNNNNNTGG 2 cut(s) 475, 809
BstYI RGATCY 2 cut(s) 374, 929
Bsu15I ATCGAT 1 cut(s) 136
BsuI GTATCC 1 cut(s) 580
BsuRI GGCC 2 cut(s) 893, 1460
BsuTUI ATCGAT 1 cut(s) 136
BtgI CCRYGG 3 cut(s) 399, 802, 888
BtsI GCAGTG 1 cut(s) 973
BtsIMutI CAGTG 2 cut(s) 342, 973
BveI ACCTGC 2 cut(s) 568, 778
Cac8I GCNNGC 5 cut(s) 461, 501, 775, 779, 794
CaiI CAGNNNCTG 2 cut(s) 443, 866
CfoI GCGC 2 cut(s) 279, 1028
Cfr10I RCCGGY 1 cut(s) 107
Cfr13I GGNCC 2 cut(s) 863, 885
ClaI ATCGAT 1 cut(s) 136
Csp6I GTAC 3 cut(s) 949, 1235, 1305
CviAII CATG 6 cut(s) 96, 460, 692, 803, 889, 1467
CviQI GTAC 3 cut(s) 949, 1235, 1305
DdeI CTNAG 2 cut(s) 90, 1044
DpnI GATC 4 cut(s) 101, 376, 931, 1273
DpnII GATC 4 cut(s) 99, 374, 929, 1271
Eam1104I CTCTTC 1 cut(s) 211
EarI CTCTTC 1 cut(s) 211
Eco130I CCWWGG 2 cut(s) 802, 888
Eco24I GRGCYC 1 cut(s) 637
Eco47I GGWCC 2 cut(s) 863, 885
Eco57I CTGAAG 1 cut(s) 537
Eco91I GGTNACC 1 cut(s) 110
EcoO109I RGGNCCY 1 cut(s) 863
EcoO65I GGTNACC 1 cut(s) 110
EcoRII CCWGG 1 cut(s) 1300
EcoT14I CCWWGG 2 cut(s) 802, 888
EcoT38I GRGCYC 1 cut(s) 637
ErhI CCWWGG 2 cut(s) 802, 888
FaeI CATG 6 cut(s) 99, 463, 695, 806, 892, 1470
FaqI GGGAC 1 cut(s) 736
FatI CATG 6 cut(s) 95, 459, 691, 802, 888, 1466
FauNDI CATATG 3 cut(s) 573, 649, 1440
Fnu4HI GCNGC 6 cut(s) 504, 696, 852, 855, 1116, 1119
FriOI GRGCYC 1 cut(s) 637
Fsp4HI GCNGC 6 cut(s) 504, 696, 852, 855, 1116, 1119
FspBI CTAG 5 cut(s) 405, 428, 666, 774, 1110
GlaI GCGC 2 cut(s) 278, 1027
GluI GCNGC 6 cut(s) 504, 696, 852, 855, 1116, 1119
GsaI CCCAGC 1 cut(s) 125
HaeIII GGCC 2 cut(s) 893, 1460
HapII CCGG 2 cut(s) 108, 370
HhaI GCGC 2 cut(s) 279, 1028
Hin1II CATG 6 cut(s) 99, 463, 695, 806, 892, 1470
Hin6I GCGC 2 cut(s) 277, 1026
HinP1I GCGC 2 cut(s) 277, 1026
HincII GTYRAC 1 cut(s) 1139
HindII GTYRAC 1 cut(s) 1139
HinfI GANTC 9 cut(s) 138, 158, 230, 386, 608, 817, 826, 970, 1421
HpaII CCGG 2 cut(s) 108, 370
HphI GGTGA 4 cut(s) 167, 359, 604, 979
Hpy166II GTNNAC 3 cut(s) 171, 1139, 1279
Hpy188I TCNGA 3 cut(s) 151, 517, 1426
Hpy188III TCNNGA 2 cut(s) 550, 1124
Hpy8I GTNNAC 3 cut(s) 171, 1139, 1279
HpyAV CCTTC 2 cut(s) 1375, 1450
HpyCH4III ACNGT 4 cut(s) 592, 1155, 1313, 1362
HpyCH4V TGCA 8 cut(s) 16, 463, 577, 851, 938, 978, 1339, 1411
HpyF10VI GCNNNNNNNGC 1 cut(s) 1025
HpyF3I CTNAG 2 cut(s) 90, 1044
Hsp92II CATG 6 cut(s) 99, 463, 695, 806, 892, 1470
HspAI GCGC 2 cut(s) 277, 1026
Kzo9I GATC 4 cut(s) 99, 374, 929, 1271
LmnI GCTCC 1 cut(s) 1333
Lsp1109I GCAGC 5 cut(s) 490, 682, 863, 1127, 1130
LweI GCATC 2 cut(s) 866, 1203
MaeI CTAG 5 cut(s) 405, 428, 666, 774, 1110
MaeIII GTNAC 6 cut(s) 110, 292, 592, 871, 1174, 1217
MalI GATC 4 cut(s) 101, 376, 931, 1273
MboI GATC 4 cut(s) 99, 374, 929, 1271
MboII GAAGA 8 cut(s) 198, 338, 354, 381, 631, 632, 653, 1060
MfeI CAATTG 4 cut(s) 981, 1096, 1179, 1245
MflI RGATCY 2 cut(s) 374, 929
MhlI GDGCHC 1 cut(s) 637
MlyI GAGTC 4 cut(s) 224, 602, 811, 1415
MmeI TCCRAC 2 cut(s) 794, 974
MseI TTAA 2 cut(s) 744, 918
MslI CAYNNNNRTG 3 cut(s) 690, 807, 962
MspA1I CMGCKG 2 cut(s) 125, 854
MspI CCGG 2 cut(s) 108, 370
MspR9I CCNGG 1 cut(s) 1302
MunI CAATTG 4 cut(s) 981, 1096, 1179, 1245
MvaI CCWGG 1 cut(s) 1302
MvnI CGCG 1 cut(s) 1028
MwoI GCNNNNNNNGC 1 cut(s) 1025
NcoI CCATGG 2 cut(s) 802, 888
NdeI CATATG 3 cut(s) 573, 649, 1440
NdeII GATC 4 cut(s) 99, 374, 929, 1271
NheI GCTAGC 1 cut(s) 773
NlaIII CATG 6 cut(s) 99, 463, 695, 806, 892, 1470
NlaIV GGNNCC 1 cut(s) 886
NmuCI GTSAC 3 cut(s) 292, 592, 1174
NspI RCATGY 1 cut(s) 463
OliI CACNNNNGTG 1 cut(s) 962
PaeI GCATGC 1 cut(s) 463
PfeI GAWTC 5 cut(s) 138, 158, 386, 826, 970
PkrI GCNGC 6 cut(s) 505, 697, 853, 856, 1117, 1120
PleI GAGTC 4 cut(s) 224, 602, 811, 1415
PpsI GAGTC 4 cut(s) 224, 602, 811, 1415
PpuMI RGGWCCY 1 cut(s) 863
PshAI GACNNNNGTC 1 cut(s) 1134
PsiI TTATAA 1 cut(s) 200
Psp5II RGGWCCY 1 cut(s) 863
Psp6I CCWGG 1 cut(s) 1300
PspEI GGTNACC 1 cut(s) 110
PspFI CCCAGC 1 cut(s) 121
PspGI CCWGG 1 cut(s) 1300
PspN4I GGNNCC 1 cut(s) 886
PspPI GGNCC 2 cut(s) 863, 885
PspPPI RGGWCCY 1 cut(s) 863
PstNI CAGNNNCTG 2 cut(s) 443, 866
PsuI RGATCY 2 cut(s) 374, 929
RsaI GTAC 3 cut(s) 950, 1236, 1306
RsaNI GTAC 3 cut(s) 949, 1235, 1305
RseI CAYNNNNRTG 3 cut(s) 690, 807, 962
SaqAI TTAA 2 cut(s) 744, 918
SatI GCNGC 6 cut(s) 504, 696, 852, 855, 1116, 1119
Sau3AI GATC 4 cut(s) 99, 374, 929, 1271
Sau96I GGNCC 2 cut(s) 863, 885
ScaI AGTACT 1 cut(s) 1236
SchI GAGTC 4 cut(s) 224, 602, 811, 1415
ScrFI CCNGG 1 cut(s) 1302
SduI GDGCHC 1 cut(s) 637
SfaNI GCATC 2 cut(s) 866, 1203
SinI GGWCC 2 cut(s) 863, 885
SmiMI CAYNNNNRTG 3 cut(s) 690, 807, 962
SmlI CTYRAG 2 cut(s) 1122, 1238
SmoI CTYRAG 2 cut(s) 1122, 1238
SphI GCATGC 1 cut(s) 463
SsiI CCGC 3 cut(s) 125, 506, 854
SspMI CTAG 5 cut(s) 405, 428, 666, 774, 1110
StyD4I CCNGG 1 cut(s) 1300
StyI CCWWGG 2 cut(s) 802, 888
TaaI ACNGT 4 cut(s) 592, 1155, 1313, 1362
TaqI TCGA 2 cut(s) 136, 228
TatI WGTACW 2 cut(s) 948, 1234
TauI GCSGC 1 cut(s) 857
TfiI GAWTC 5 cut(s) 138, 158, 386, 826, 970
Tru1I TTAA 2 cut(s) 744, 918
Tru9I TTAA 2 cut(s) 744, 918
TscAI CASTG 2 cut(s) 342, 980
TseFI GTSAC 3 cut(s) 292, 592, 1174
TseI GCWGC 5 cut(s) 503, 695, 851, 1115, 1118
Tsp45I GTSAC 3 cut(s) 292, 592, 1174
TspDTI ATGAA 7 cut(s) 336, 370, 892, 904, 1342, 1457, 1464
TspGWI ACGGA 2 cut(s) 746, 1146
TspRI CASTG 2 cut(s) 342, 980
VpaK11BI GGWCC 2 cut(s) 863, 885
XapI RAATTY 1 cut(s) 265
XceI RCATGY 1 cut(s) 463
XspI CTAG 5 cut(s) 405, 428, 666, 774, 1110
ZrmI AGTACT 1 cut(s) 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.