methylated histone binding
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 229 |
| AccB1I | GGYRCC | 1 cut(s) | 120 |
| AciI | CCGC | 2 cut(s) | 170, 190 |
| AcsI | RAATTY | 1 cut(s) | 230 |
| AcyI | GRCGYC | 1 cut(s) | 121 |
| AfaI | GTAC | 1 cut(s) | 154 |
| AleI | CACNNNNGTG | 1 cut(s) | 254 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 96, 128 |
| AluBI | AGCT | 1 cut(s) | 16 |
| AluI | AGCT | 1 cut(s) | 16 |
| AoxI | GGCC | 3 cut(s) | 63, 83, 223 |
| ApoI | RAATTY | 1 cut(s) | 230 |
| AspLEI | GCGC | 1 cut(s) | 123 |
| AspS9I | GGNCC | 3 cut(s) | 63, 84, 224 |
| AsuHPI | GGTGA | 1 cut(s) | 206 |
| BanI | GGYRCC | 1 cut(s) | 120 |
| BceAI | ACGGC | 2 cut(s) | 108, 134 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 227, 261 |
| BfmI | CTRYAG | 1 cut(s) | 236 |
| BfoI | RGCGCY | 1 cut(s) | 124 |
| BfuAI | ACCTGC | 1 cut(s) | 229 |
| BmgT120I | GGNCC | 3 cut(s) | 63, 84, 224 |
| BmiI | GGNNCC | 2 cut(s) | 122, 226 |
| BsaHI | GRCGYC | 1 cut(s) | 121 |
| BsaJI | CCNNGG | 1 cut(s) | 220 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 96, 126 |
| BseDI | CCNNGG | 1 cut(s) | 220 |
| BseRI | GAGGAG | 1 cut(s) | 209 |
| BshFI | GGCC | 3 cut(s) | 65, 85, 225 |
| BshNI | GGYRCC | 1 cut(s) | 120 |
| BsnI | GGCC | 3 cut(s) | 65, 85, 225 |
| BspACI | CCGC | 2 cut(s) | 170, 190 |
| BspANI | GGCC | 3 cut(s) | 65, 85, 225 |
| BspHI | TCATGA | 1 cut(s) | 129 |
| BspLI | GGNNCC | 2 cut(s) | 122, 226 |
| BspMAI | CTGCAG | 1 cut(s) | 240 |
| BspMI | ACCTGC | 1 cut(s) | 229 |
| BspT107I | GGYRCC | 1 cut(s) | 120 |
| BssECI | CCNNGG | 1 cut(s) | 220 |
| BssNI | GRCGYC | 1 cut(s) | 121 |
| Bst4CI | ACNGT | 1 cut(s) | 152 |
| BstACI | GRCGYC | 1 cut(s) | 121 |
| BstH2I | RGCGCY | 1 cut(s) | 124 |
| BstHHI | GCGC | 1 cut(s) | 123 |
| BstSFI | CTRYAG | 1 cut(s) | 236 |
| BsuRI | GGCC | 3 cut(s) | 65, 85, 225 |
| BveI | ACCTGC | 1 cut(s) | 229 |
| CciI | TCATGA | 1 cut(s) | 129 |
| CfoI | GCGC | 1 cut(s) | 123 |
| Cfr13I | GGNCC | 3 cut(s) | 63, 84, 224 |
| Csp6I | GTAC | 1 cut(s) | 153 |
| CviAII | CATG | 1 cut(s) | 130 |
| CviJI | RGCY | 5 cut(s) | 16, 65, 78, 85, 225 |
| CviKI_1 | RGCY | 5 cut(s) | 16, 65, 78, 85, 225 |
| CviQI | GTAC | 1 cut(s) | 153 |
| DinI | GGCGCC | 1 cut(s) | 122 |
| EcoO109I | RGGNCCY | 1 cut(s) | 63 |
| EgeI | GGCGCC | 1 cut(s) | 122 |
| EheI | GGCGCC | 1 cut(s) | 122 |
| FaeI | CATG | 1 cut(s) | 133 |
| FaiI | YATR | 5 cut(s) | 31, 33, 131, 138, 140 |
| FatI | CATG | 1 cut(s) | 129 |
| FauI | CCCGC | 1 cut(s) | 197 |
| GlaI | GCGC | 1 cut(s) | 122 |
| HaeII | RGCGCY | 1 cut(s) | 124 |
| HaeIII | GGCC | 3 cut(s) | 65, 85, 225 |
| HhaI | GCGC | 1 cut(s) | 123 |
| Hin1I | GRCGYC | 1 cut(s) | 121 |
| Hin1II | CATG | 1 cut(s) | 133 |
| Hin6I | GCGC | 1 cut(s) | 121 |
| HinP1I | GCGC | 1 cut(s) | 121 |
| HphI | GGTGA | 1 cut(s) | 206 |
| Hpy188I | TCNGA | 2 cut(s) | 186, 203 |
| Hpy188III | TCNNGA | 1 cut(s) | 130 |
| HpyCH4III | ACNGT | 1 cut(s) | 152 |
| HpyCH4V | TGCA | 2 cut(s) | 148, 238 |
| Hsp92I | GRCGYC | 1 cut(s) | 121 |
| Hsp92II | CATG | 1 cut(s) | 133 |
| HspAI | GCGC | 1 cut(s) | 121 |
| KasI | GGCGCC | 1 cut(s) | 120 |
| LmnI | GCTCC | 1 cut(s) | 204 |
| LpnPI | CCDG | 2 cut(s) | 224, 248 |
| MboII | GAAGA | 1 cut(s) | 16 |
| MluCI | AATT | 2 cut(s) | 69, 230 |
| Mly113I | GGCGCC | 1 cut(s) | 121 |
| MmeI | TCCRAC | 1 cut(s) | 209 |
| MnlI | CCTC | 5 cut(s) | 54, 97, 220, 227, 230 |
| MseI | TTAA | 1 cut(s) | 68 |
| MslI | CAYNNNNRTG | 1 cut(s) | 254 |
| NarI | GGCGCC | 1 cut(s) | 121 |
| NlaIII | CATG | 1 cut(s) | 133 |
| NlaIV | GGNNCC | 2 cut(s) | 122, 226 |
| NmeAIII | GCCGAG | 1 cut(s) | 201 |
| OliI | CACNNNNGTG | 1 cut(s) | 254 |
| PagI | TCATGA | 1 cut(s) | 129 |
| PluTI | GGCGCC | 1 cut(s) | 124 |
| PspN4I | GGNNCC | 2 cut(s) | 122, 226 |
| PspPI | GGNCC | 3 cut(s) | 63, 84, 224 |
| PstI | CTGCAG | 1 cut(s) | 240 |
| RsaI | GTAC | 1 cut(s) | 154 |
| RsaNI | GTAC | 1 cut(s) | 153 |
| RseI | CAYNNNNRTG | 1 cut(s) | 254 |
| SaqAI | TTAA | 1 cut(s) | 68 |
| Sau96I | GGNCC | 3 cut(s) | 63, 84, 224 |
| SbfI | CCTGCAGG | 1 cut(s) | 240 |
| SdaI | CCTGCAGG | 1 cut(s) | 240 |
| SetI | ASST | 5 cut(s) | 18, 137, 219, 243, 254 |
| SfcI | CTRYAG | 1 cut(s) | 236 |
| SfoI | GGCGCC | 1 cut(s) | 122 |
| SgeI | CNNG | 8 cut(s) | 104, 142, 186, 192, 201, 233, 247, 251 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 254 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 240 |
| Sse9I | AATT | 2 cut(s) | 69, 230 |
| SsiI | CCGC | 2 cut(s) | 170, 190 |
| SspDI | GGCGCC | 1 cut(s) | 120 |
| TaaI | ACNGT | 1 cut(s) | 152 |
| TasI | AATT | 2 cut(s) | 69, 230 |
| Tru1I | TTAA | 1 cut(s) | 68 |
| Tru9I | TTAA | 1 cut(s) | 68 |
| TspDTI | ATGAA | 2 cut(s) | 17, 118 |
| XapI | RAATTY | 1 cut(s) | 230 |