Rorug03G0325900

Protein of unknown function (DUF632)

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
Physical Location & Seq
Forward (+)
35912224 .. 35915665
3442 bp
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UTR
Exon/CDS
Intron
Rorug03G0325900.1

Sequence Viewer

Length: 189 bp
ATGAACTTGACTTCGAAAAGGGGTTCTTTAACAAGAAAGGCAAGAAAGAATGCGGAAAGCATTGTAAGAGACCAGGCAGGAATGGCAAGAGAGCGGTTTCAGATCGCTGCAAAAGCAGGATGTGATCTTGGACAGAAATGGTTGGAAAGACTTGACGAGGAAGAGAATCATCTATTGACCGAAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

62

Amino Acids

7.09

Weight (kDa)

7.93

Isoelectric Point (pI)

39.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 94
AciI CCGC 2 cut(s) 53, 94
AjnI CCWGG 1 cut(s) 72
Alw26I GTCTC 1 cut(s) 63
ApeKI GCWGC 1 cut(s) 107
AsuII TTCGAA 1 cut(s) 14
BbvI GCAGC 1 cut(s) 94
BciT130I CCWGG 1 cut(s) 74
BcoDI GTCTC 1 cut(s) 63
BisI GCNGC 1 cut(s) 108
BlsI GCNGC 1 cut(s) 109
Bme1390I CCNGG 1 cut(s) 74
BmrFI CCNGG 1 cut(s) 74
Bpu14I TTCGAA 1 cut(s) 14
BsaI GGTCTC 1 cut(s) 63
BseBI CCWGG 1 cut(s) 74
BseGI GGATG 1 cut(s) 125
BseXI GCAGC 1 cut(s) 94
BsmAI GTCTC 1 cut(s) 63
BsmI GAATGC 1 cut(s) 55
Bso31I GGTCTC 1 cut(s) 63
Bsp119I TTCGAA 1 cut(s) 14
Bsp143I GATC 2 cut(s) 102, 124
BspACI CCGC 2 cut(s) 53, 94
BspT104I TTCGAA 1 cut(s) 14
BspTNI GGTCTC 1 cut(s) 63
BsrBI CCGCTC 1 cut(s) 94
BssMI GATC 2 cut(s) 102, 124
Bst2UI CCWGG 1 cut(s) 74
Bst6I CTCTTC 1 cut(s) 156
BstBI TTCGAA 1 cut(s) 14
BstF5I GGATG 1 cut(s) 125
BstKTI GATC 2 cut(s) 105, 127
BstMAI GTCTC 1 cut(s) 63
BstMBI GATC 2 cut(s) 102, 124
BstMWI GCNNNNNNNGC 2 cut(s) 83, 113
BstNI CCWGG 1 cut(s) 74
BstSCI CCNGG 1 cut(s) 72
BstV1I GCAGC 1 cut(s) 94
BtsCI GGATG 1 cut(s) 125
DpnI GATC 2 cut(s) 104, 126
DpnII GATC 2 cut(s) 102, 124
Eam1104I CTCTTC 1 cut(s) 156
EarI CTCTTC 1 cut(s) 156
Eco31I GGTCTC 1 cut(s) 63
EcoRII CCWGG 1 cut(s) 72
FalI AAGNNNNNCTT 2 cut(s) 10, 42
Fnu4HI GCNGC 1 cut(s) 108
FokI GGATG 1 cut(s) 132
Fsp4HI GCNGC 1 cut(s) 108
GluI GCNGC 1 cut(s) 108
HinfI GANTC 1 cut(s) 166
Hpy188I TCNGA 1 cut(s) 102
HpyCH4V TGCA 1 cut(s) 110
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 113
Kzo9I GATC 2 cut(s) 102, 124
LpnPI CCDG 4 cut(s) 59, 63, 86, 102
Lsp1109I GCAGC 1 cut(s) 94
MalI GATC 2 cut(s) 104, 126
MbiI CCGCTC 1 cut(s) 94
MboI GATC 2 cut(s) 102, 124
MboII GAAGA 1 cut(s) 173
MmeI TCCRAC 1 cut(s) 123
MnlI CCTC 1 cut(s) 151
MseI TTAA 1 cut(s) 29
MspR9I CCNGG 1 cut(s) 74
Mva1269I GAATGC 1 cut(s) 55
MvaI CCWGG 1 cut(s) 74
MwoI GCNNNNNNNGC 2 cut(s) 83, 113
NdeII GATC 2 cut(s) 102, 124
NspV TTCGAA 1 cut(s) 14
PctI GAATGC 1 cut(s) 55
PfeI GAWTC 1 cut(s) 166
PkrI GCNGC 1 cut(s) 109
Psp6I CCWGG 1 cut(s) 72
PspGI CCWGG 1 cut(s) 72
SaqAI TTAA 1 cut(s) 29
SatI GCNGC 1 cut(s) 108
Sau3AI GATC 2 cut(s) 102, 124
ScrFI CCNGG 1 cut(s) 74
SfuI TTCGAA 1 cut(s) 14
SsiI CCGC 2 cut(s) 53, 94
StyD4I CCNGG 1 cut(s) 72
TaqI TCGA 1 cut(s) 14
TfiI GAWTC 1 cut(s) 166
Tru1I TTAA 1 cut(s) 29
Tru9I TTAA 1 cut(s) 29
TseI GCWGC 1 cut(s) 107
TspDTI ATGAA 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.