Rh7DG240400

Protein of unknown function (DUF632)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0001467
Physical Location & Seq
Forward (+)
24667552 .. 24672188
4637 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG240400.1

Sequence Viewer

Length: 585 bp
ATGGCGGAGCCAGAAGAGATACCAGGGGCATCGCTTATGGAGAAGATCTACTCCCAGTGCCGCTCGTCGTCGTCATCTTCCGACGATGACAAGCCGTCGAAGAAGGCCGATGATGTCAAGCACAAGGCTGACATAGGAGACTTCATGCTTGTTCTCGCGGTGGTCAAGACATTCGATTCTGTGTTCTCTGCCGATGAAGGTTTCTGTAGCTTGAAGCTGGCAGGTGAGCTCATGAAATTTGAGTACCAAAAGAAGGTCGCGTCGCTGAGCAAGCTAAAGAAATGCAGTACTAACTCAGAAGCATTGGAGAAATCAAGAGTAGCAGTGAGTCATCTGCATATAAGATACATAGTTGACATGAAATCCATGGACCCAACAGTATCAAAGAACCGTATGGAAGCAAAAACGTATCATAGAGCAGCTTCTCTAAACAACAAATCCTTCATCCTCAGCAAGAAGTTCGTCAAAGCTTACATTCCAGGAATCACTGTTGCAAATTCTGCCCAAACAAGGAATGATTGTCCACACAAGTATTGCAGACTGAGGTGGGTGAATTATTTGAGGCCAGACCTTAAGAAGGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632

Protein Analysis

194

Amino Acids

21.82

Weight (kDa)

9.4

Isoelectric Point (pI)

32.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF632 PF04782 74 - 128 1.1e-08 Protein of unknown function (DUF632)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 212
Acc36I ACCTGC 1 cut(s) 212
AccBSI CCGCTC 1 cut(s) 63
AccII CGCG 2 cut(s) 158, 260
AciI CCGC 3 cut(s) 5, 61, 158
AcsI RAATTY 2 cut(s) 236, 496
AfaI GTAC 2 cut(s) 245, 289
AfiI CCNNNNNNNGG 3 cut(s) 253, 510, 577
AflII CTTAAG 1 cut(s) 572
AgsI TTSAA 1 cut(s) 214
AhdI GACNNNNNGTC 1 cut(s) 94
AjnI CCWGG 2 cut(s) 22, 478
AluBI AGCT 6 cut(s) 210, 217, 229, 274, 422, 470
AluI AGCT 6 cut(s) 210, 217, 229, 274, 422, 470
Alw21I GWGCWC 1 cut(s) 231
Alw26I GTCTC 1 cut(s) 132
AoxI GGCC 2 cut(s) 105, 563
ApeKI GCWGC 1 cut(s) 419
ApoI RAATTY 2 cut(s) 236, 496
AspS9I GGNCC 1 cut(s) 370
AsuHPI GGTGA 2 cut(s) 236, 562
AvaII GGWCC 1 cut(s) 370
BanII GRGCYC 1 cut(s) 231
Bbv12I GWGCWC 1 cut(s) 231
BbvCI CCTCAGC 1 cut(s) 449
BbvI GCAGC 1 cut(s) 431
BceAI ACGGC 1 cut(s) 79
BcgI CGANNNNNNTGC 2 cut(s) 442, 476
BciT130I CCWGG 2 cut(s) 24, 480
BcoDI GTCTC 1 cut(s) 132
BfmI CTRYAG 1 cut(s) 205
BfrI CTTAAG 1 cut(s) 572
BfuAI ACCTGC 1 cut(s) 212
BglII AGATCT 1 cut(s) 45
BisI GCNGC 2 cut(s) 61, 420
BlpI GCTNAGC 1 cut(s) 266
BlsI GCNGC 2 cut(s) 62, 421
BmcAI AGTACT 1 cut(s) 289
Bme1390I CCNGG 2 cut(s) 24, 480
Bme18I GGWCC 1 cut(s) 370
BmeRI GACNNNNNGTC 1 cut(s) 94
BmgT120I GGNCC 1 cut(s) 370
BmiI GGNNCC 2 cut(s) 9, 372
BmrFI CCNGG 2 cut(s) 24, 480
BmrI ACTGGG 1 cut(s) 49
BmsI GCATC 1 cut(s) 38
BmuI ACTGGG 1 cut(s) 49
Bpu10I CCTNAGC 1 cut(s) 449
Bpu1102I GCTNAGC 1 cut(s) 266
BsaJI CCNNGG 2 cut(s) 23, 366
Bsc4I CCNNNNNNNGG 3 cut(s) 253, 510, 577
Bse1I ACTGG 1 cut(s) 55
BseBI CCWGG 2 cut(s) 24, 480
BseDI CCNNGG 2 cut(s) 23, 366
BseGI GGATG 1 cut(s) 444
BseLI CCNNNNNNNGG 3 cut(s) 253, 510, 577
BseMII CTCAG 4 cut(s) 257, 309, 463, 533
BseNI ACTGG 1 cut(s) 55
BseXI GCAGC 1 cut(s) 431
Bsh1236I CGCG 2 cut(s) 158, 260
BshFI GGCC 2 cut(s) 107, 565
BsiHKAI GWGCWC 1 cut(s) 231
BslI CCNNNNNNNGG 3 cut(s) 253, 510, 577
BsmAI GTCTC 1 cut(s) 132
BsnI GGCC 2 cut(s) 107, 565
Bsp1286I GDGCHC 1 cut(s) 231
Bsp143I GATC 1 cut(s) 45
Bsp1720I GCTNAGC 1 cut(s) 266
Bsp19I CCATGG 1 cut(s) 366
BspACI CCGC 3 cut(s) 5, 61, 158
BspANI GGCC 2 cut(s) 107, 565
BspCNI CTCAG 4 cut(s) 258, 308, 462, 534
BspFNI CGCG 2 cut(s) 158, 260
BspHI TCATGA 1 cut(s) 231
BspLI GGNNCC 2 cut(s) 9, 372
BspMI ACCTGC 1 cut(s) 212
BspTI CTTAAG 1 cut(s) 572
BsrBI CCGCTC 1 cut(s) 63
BsrI ACTGG 1 cut(s) 55
BssECI CCNNGG 2 cut(s) 23, 366
BssMI GATC 1 cut(s) 45
BssT1I CCWWGG 1 cut(s) 366
Bst2UI CCWGG 2 cut(s) 24, 480
Bst4CI ACNGT 3 cut(s) 379, 392, 490
Bst6I CTCTTC 1 cut(s) 9
BstAFI CTTAAG 1 cut(s) 572
BstAPI GCANNNNNTGC 1 cut(s) 500
BstC8I GCNNGC 2 cut(s) 219, 272
BstDEI CTNAG 4 cut(s) 266, 295, 449, 542
BstDSI CCRYGG 1 cut(s) 366
BstENI CCTNNNNNAGG 1 cut(s) 575
BstF5I GGATG 1 cut(s) 444
BstFNI CGCG 2 cut(s) 158, 260
BstKTI GATC 1 cut(s) 48
BstMAI GTCTC 1 cut(s) 132
BstMBI GATC 1 cut(s) 45
BstMWI GCNNNNNNNGC 2 cut(s) 271, 500
BstNI CCWGG 2 cut(s) 24, 480
BstSCI CCNGG 2 cut(s) 22, 478
BstSFI CTRYAG 1 cut(s) 205
BstUI CGCG 2 cut(s) 158, 260
BstV1I GCAGC 1 cut(s) 431
BstX2I RGATCY 1 cut(s) 45
BstYI RGATCY 1 cut(s) 45
BsuRI GGCC 2 cut(s) 107, 565
BtgI CCRYGG 1 cut(s) 366
BtgZI GCGATG 1 cut(s) 15
BtsCI GGATG 1 cut(s) 444
BtsI GCAGTG 1 cut(s) 330
BtsIMutI CAGTG 3 cut(s) 62, 330, 486
BveI ACCTGC 1 cut(s) 212
Cac8I GCNNGC 2 cut(s) 219, 272
CciI TCATGA 1 cut(s) 231
Cfr13I GGNCC 1 cut(s) 370
CseI GACGC 1 cut(s) 249
Csp6I GTAC 2 cut(s) 244, 288
CviAII CATG 4 cut(s) 145, 232, 358, 367
CviQI GTAC 2 cut(s) 244, 288
DdeI CTNAG 4 cut(s) 266, 295, 449, 542
DpnI GATC 1 cut(s) 47
DpnII GATC 1 cut(s) 45
DriI GACNNNNNGTC 1 cut(s) 94
Eam1104I CTCTTC 1 cut(s) 9
Eam1105I GACNNNNNGTC 1 cut(s) 94
EarI CTCTTC 1 cut(s) 9
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 229
Eco130I CCWWGG 1 cut(s) 366
Eco24I GRGCYC 1 cut(s) 231
Eco47I GGWCC 1 cut(s) 370
Eco53kI GAGCTC 1 cut(s) 229
EcoICRI GAGCTC 1 cut(s) 229
EcoNI CCTNNNNNAGG 1 cut(s) 575
EcoRII CCWGG 2 cut(s) 22, 478
EcoT14I CCWWGG 1 cut(s) 366
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 1 cut(s) 366
FaeI CATG 4 cut(s) 148, 235, 361, 370
FatI CATG 4 cut(s) 144, 231, 357, 366
Fnu4HI GCNGC 2 cut(s) 61, 420
FokI GGATG 1 cut(s) 431
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 2 cut(s) 61, 420
GluI GCNGC 2 cut(s) 61, 420
HaeIII GGCC 2 cut(s) 107, 565
HgaI GACGC 1 cut(s) 249
Hin1II CATG 4 cut(s) 148, 235, 361, 370
HincII GTYRAC 1 cut(s) 355
HindII GTYRAC 1 cut(s) 355
HindIII AAGCTT 1 cut(s) 468
HinfI GANTC 3 cut(s) 176, 328, 483
HphI GGTGA 2 cut(s) 236, 562
Hpy166II GTNNAC 2 cut(s) 355, 524
Hpy188I TCNGA 2 cut(s) 82, 298
Hpy188III TCNNGA 3 cut(s) 166, 232, 315
Hpy8I GTNNAC 2 cut(s) 355, 524
Hpy99I CGWCG 5 cut(s) 70, 73, 86, 100, 265
HpyAV CCTTC 5 cut(s) 97, 191, 247, 451, 571
HpyCH4III ACNGT 3 cut(s) 379, 392, 490
HpyCH4IV ACGT 1 cut(s) 407
HpyCH4V TGCA 4 cut(s) 285, 337, 494, 537
HpyF10VI GCNNNNNNNGC 2 cut(s) 271, 500
HpyF3I CTNAG 4 cut(s) 266, 295, 449, 542
HpySE526I ACGT 1 cut(s) 407
Hsp92II CATG 4 cut(s) 148, 235, 361, 370
Kzo9I GATC 1 cut(s) 45
LmnI GCTCC 1 cut(s) 7
LpnPI CCDG 9 cut(s) 9, 24, 36, 68, 203, 207, 465, 492, 579
Lsp1109I GCAGC 1 cut(s) 431
LweI GCATC 1 cut(s) 38
MaeII ACGT 1 cut(s) 407
MalI GATC 1 cut(s) 47
MbiI CCGCTC 1 cut(s) 63
MboI GATC 1 cut(s) 45
MboII GAAGA 4 cut(s) 26, 55, 69, 112
MflI RGATCY 1 cut(s) 45
MhlI GDGCHC 1 cut(s) 231
MluCI AATT 3 cut(s) 236, 496, 553
MlyI GAGTC 1 cut(s) 337
MmeI TCCRAC 1 cut(s) 105
MnlI CCTC 3 cut(s) 458, 537, 555
MseI TTAA 1 cut(s) 573
MspCI CTTAAG 1 cut(s) 572
MspR9I CCNGG 2 cut(s) 24, 480
MvaI CCWGG 2 cut(s) 24, 480
MvnI CGCG 2 cut(s) 158, 260
MwoI GCNNNNNNNGC 2 cut(s) 271, 500
NcoI CCATGG 1 cut(s) 366
NdeII GATC 1 cut(s) 45
NlaIII CATG 4 cut(s) 148, 235, 361, 370
NlaIV GGNNCC 2 cut(s) 9, 372
PagI TCATGA 1 cut(s) 231
PaqCI CACCTGC 1 cut(s) 212
PfeI GAWTC 2 cut(s) 176, 483
PfoI TCCNGGA 1 cut(s) 478
PkrI GCNGC 2 cut(s) 62, 421
PleI GAGTC 1 cut(s) 336
PpsI GAGTC 1 cut(s) 336
Psp124BI GAGCTC 1 cut(s) 231
Psp6I CCWGG 2 cut(s) 22, 478
PspGI CCWGG 2 cut(s) 22, 478
PspN4I GGNNCC 2 cut(s) 9, 372
PspPI GGNCC 1 cut(s) 370
PsuI RGATCY 1 cut(s) 45
RsaI GTAC 2 cut(s) 245, 289
RsaNI GTAC 2 cut(s) 244, 288
SacI GAGCTC 1 cut(s) 231
SaqAI TTAA 1 cut(s) 573
SatI GCNGC 2 cut(s) 61, 420
Sau3AI GATC 1 cut(s) 45
Sau96I GGNCC 1 cut(s) 370
ScaI AGTACT 1 cut(s) 289
SchI GAGTC 1 cut(s) 337
ScrFI CCNGG 2 cut(s) 24, 480
SduI GDGCHC 1 cut(s) 231
SfaNI GCATC 1 cut(s) 38
SfcI CTRYAG 1 cut(s) 205
SinI GGWCC 1 cut(s) 370
SmlI CTYRAG 1 cut(s) 572
SmoI CTYRAG 1 cut(s) 572
Sse9I AATT 3 cut(s) 236, 496, 553
SsiI CCGC 3 cut(s) 5, 61, 158
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 2 cut(s) 22, 478
StyI CCWWGG 1 cut(s) 366
TaaI ACNGT 3 cut(s) 379, 392, 490
TaiI ACGT 1 cut(s) 410
TaqI TCGA 2 cut(s) 98, 174
TasI AATT 3 cut(s) 236, 496, 553
TatI WGTACW 1 cut(s) 287
TauI GCSGC 1 cut(s) 63
TfiI GAWTC 2 cut(s) 176, 483
Tru1I TTAA 1 cut(s) 573
Tru9I TTAA 1 cut(s) 573
TscAI CASTG 3 cut(s) 62, 330, 493
TseI GCWGC 1 cut(s) 419
TspDTI ATGAA 5 cut(s) 133, 210, 248, 374, 433
TspRI CASTG 3 cut(s) 62, 330, 493
Vha464I CTTAAG 1 cut(s) 572
VpaK11BI GGWCC 1 cut(s) 370
XagI CCTNNNNNAGG 1 cut(s) 575
XapI RAATTY 2 cut(s) 236, 496
ZrmI AGTACT 1 cut(s) 289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.