RchiOBHm_Chr1g0315221

Allantoate

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
2407248 .. 2407904
657 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 186 bp
ATGAGCCCAGCAGCTGTGAGGGCTGGAAGTCTTATCCTCGAATGGATGGAGGATGCTGGTTTGAGAACGTGGGTTGATTGCTTGGGAAATGTACATGGTCGAGTTGAGGGTACAAATGCTAGTGCTGAGGTTCTAATACTTGGTTCTCATTTGGTACTGTTCTTTTCCCATAAATTTCCTAACTGA

Protein Analysis

61

Amino Acids

6.62

Weight (kDa)

5.78

Isoelectric Point (pI)

38.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 173
AfaI GTAC 3 cut(s) 93, 112, 156
AluBI AGCT 1 cut(s) 14
AluI AGCT 1 cut(s) 14
AlwNI CAGNNNCTG 1 cut(s) 14
ApeKI GCWGC 1 cut(s) 11
ApoI RAATTY 1 cut(s) 173
BanII GRGCYC 1 cut(s) 8
BbvCI CCTCAGC 1 cut(s) 126
BbvI GCAGC 1 cut(s) 23
BccI CCATC 1 cut(s) 40
BfaI CTAG 1 cut(s) 120
BisI GCNGC 1 cut(s) 12
BlsI GCNGC 1 cut(s) 13
BmsI GCATC 1 cut(s) 43
Bpu10I CCTNAGC 1 cut(s) 126
BseGI GGATG 2 cut(s) 51, 58
BseMII CTCAG 1 cut(s) 117
BseXI GCAGC 1 cut(s) 23
BseYI CCCAGC 1 cut(s) 7
Bsp1286I GDGCHC 1 cut(s) 8
Bsp1407I TGTACA 1 cut(s) 91
BspCNI CTCAG 1 cut(s) 118
BsrGI TGTACA 1 cut(s) 91
Bst4CI ACNGT 1 cut(s) 159
BstAUI TGTACA 1 cut(s) 91
BstDEI CTNAG 1 cut(s) 126
BstF5I GGATG 2 cut(s) 51, 58
BstMWI GCNNNNNNNGC 1 cut(s) 20
BstV1I GCAGC 1 cut(s) 23
BtsCI GGATG 2 cut(s) 51, 58
CaiI CAGNNNCTG 1 cut(s) 14
Csp6I GTAC 3 cut(s) 92, 111, 155
CviAII CATG 1 cut(s) 95
CviJI RGCY 3 cut(s) 6, 14, 23
CviKI_1 RGCY 3 cut(s) 6, 14, 23
CviQI GTAC 3 cut(s) 92, 111, 155
DdeI CTNAG 1 cut(s) 126
Eco24I GRGCYC 1 cut(s) 8
EcoT38I GRGCYC 1 cut(s) 8
FaeI CATG 1 cut(s) 98
FaiI YATR 2 cut(s) 96, 171
FatI CATG 1 cut(s) 94
Fnu4HI GCNGC 1 cut(s) 12
FokI GGATG 2 cut(s) 58, 65
FriOI GRGCYC 1 cut(s) 8
Fsp4HI GCNGC 1 cut(s) 12
FspBI CTAG 1 cut(s) 120
GluI GCNGC 1 cut(s) 12
GsaI CCCAGC 1 cut(s) 11
Hin1II CATG 1 cut(s) 98
HpyCH4III ACNGT 1 cut(s) 159
HpyCH4IV ACGT 1 cut(s) 68
HpyF10VI GCNNNNNNNGC 1 cut(s) 20
HpyF3I CTNAG 1 cut(s) 126
HpySE526I ACGT 1 cut(s) 68
Hsp92II CATG 1 cut(s) 98
LpnPI CCDG 3 cut(s) 9, 21, 42
Lsp1109I GCAGC 1 cut(s) 23
LweI GCATC 1 cut(s) 43
MaeI CTAG 1 cut(s) 120
MaeII ACGT 1 cut(s) 68
MhlI GDGCHC 1 cut(s) 8
MluCI AATT 1 cut(s) 173
MnlI CCTC 5 cut(s) 12, 43, 47, 100, 121
MspA1I CMGCKG 1 cut(s) 14
MwoI GCNNNNNNNGC 1 cut(s) 20
NlaIII CATG 1 cut(s) 98
PkrI GCNGC 1 cut(s) 13
PspFI CCCAGC 1 cut(s) 7
PstNI CAGNNNCTG 1 cut(s) 14
PvuII CAGCTG 1 cut(s) 14
RsaI GTAC 3 cut(s) 93, 112, 156
RsaNI GTAC 3 cut(s) 92, 111, 155
SatI GCNGC 1 cut(s) 12
SduI GDGCHC 1 cut(s) 8
SetI ASST 3 cut(s) 16, 71, 132
SfaNI GCATC 1 cut(s) 43
Sse9I AATT 1 cut(s) 173
SspMI CTAG 1 cut(s) 120
TaaI ACNGT 1 cut(s) 159
TaiI ACGT 1 cut(s) 71
TaqI TCGA 2 cut(s) 39, 100
TasI AATT 1 cut(s) 173
TatI WGTACW 1 cut(s) 91
TseI GCWGC 1 cut(s) 11
XapI RAATTY 1 cut(s) 173
XspI CTAG 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.