NAD(P)H-binding
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NmrA | PF05368 | 130 - 216 | 2e-07 | NmrA-like family |
| Epimerase | PF01370 | 133 - 371 | 1.1e-23 | NAD dependent epimerase/dehydratase family |
| 3Beta_HSD | PF01073 | 135 - 367 | 2.7e-19 | 3-beta hydroxysteroid dehydrogenase/isomerase family |
| NAD_binding_4 | PF07993 | 135 - 324 | 5.4e-13 | Male sterility protein |
| GDP_Man_Dehyd | PF16363 | 135 - 379 | 2.4e-11 | GDP-mannose 4,6 dehydratase |
| NAD_binding_10 | PF13460 | 137 - 258 | 4.2e-10 | NAD(P)H-binding |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 749 |
| AccB1I | GGYRCC | 1 cut(s) | 254 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1267 |
| AciI | CCGC | 3 cut(s) | 381, 659, 1286 |
| AclWI | GGATC | 3 cut(s) | 230, 718, 824 |
| AcuI | CTGAAG | 1 cut(s) | 1322 |
| AfaI | GTAC | 2 cut(s) | 7, 76 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 483, 1267 |
| AgsI | TTSAA | 6 cut(s) | 688, 873, 1097, 1292, 1316, 1324 |
| AhlI | ACTAGT | 1 cut(s) | 997 |
| AjnI | CCWGG | 1 cut(s) | 1239 |
| AluBI | AGCT | 8 cut(s) | 62, 122, 335, 378, 445, 856, 884, 893 |
| AluI | AGCT | 8 cut(s) | 62, 122, 335, 378, 445, 856, 884, 893 |
| Alw21I | GWGCWC | 1 cut(s) | 516 |
| Alw26I | GTCTC | 3 cut(s) | 243, 317, 1302 |
| AlwI | GGATC | 3 cut(s) | 230, 718, 824 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 833 |
| AoxI | GGCC | 2 cut(s) | 208, 958 |
| ApeKI | GCWGC | 4 cut(s) | 62, 378, 764, 893 |
| AseI | ATTAAT | 1 cut(s) | 671 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 546, 999, 1029, 1337 |
| AspLEI | GCGC | 1 cut(s) | 42 |
| AspS9I | GGNCC | 5 cut(s) | 110, 487, 724, 959, 1020 |
| AsuC2I | CCSGG | 1 cut(s) | 945 |
| AsuHPI | GGTGA | 2 cut(s) | 964, 1229 |
| AsuII | TTCGAA | 1 cut(s) | 558 |
| AvaII | GGWCC | 4 cut(s) | 110, 487, 724, 1020 |
| BanI | GGYRCC | 1 cut(s) | 254 |
| BanII | GRGCYC | 1 cut(s) | 133 |
| BauI | CACGAG | 1 cut(s) | 1172 |
| Bbv12I | GWGCWC | 1 cut(s) | 516 |
| BbvCI | CCTCAGC | 2 cut(s) | 66, 885 |
| BbvI | GCAGC | 4 cut(s) | 49, 365, 776, 880 |
| BccI | CCATC | 6 cut(s) | 120, 271, 524, 596, 942, 1111 |
| BceAI | ACGGC | 2 cut(s) | 223, 242 |
| BciT130I | CCWGG | 1 cut(s) | 1241 |
| BciVI | GTATCC | 2 cut(s) | 1255, 1300 |
| BclI | TGATCA | 1 cut(s) | 496 |
| BcnI | CCSGG | 1 cut(s) | 945 |
| BcoDI | GTCTC | 3 cut(s) | 243, 317, 1302 |
| BcuI | ACTAGT | 1 cut(s) | 997 |
| BfaI | CTAG | 6 cut(s) | 9, 194, 437, 998, 1088, 1110 |
| BfmI | CTRYAG | 1 cut(s) | 1045 |
| BfuI | GTATCC | 2 cut(s) | 1255, 1300 |
| BglII | AGATCT | 1 cut(s) | 1176 |
| BisI | GCNGC | 4 cut(s) | 63, 379, 765, 894 |
| BlsI | GCNGC | 4 cut(s) | 64, 380, 766, 895 |
| BmcAI | AGTACT | 1 cut(s) | 7 |
| Bme1390I | CCNGG | 2 cut(s) | 945, 1241 |
| Bme18I | GGWCC | 4 cut(s) | 110, 487, 724, 1020 |
| BmgT120I | GGNCC | 5 cut(s) | 110, 487, 724, 959, 1020 |
| BmiI | GGNNCC | 4 cut(s) | 256, 488, 489, 1021 |
| BmrFI | CCNGG | 2 cut(s) | 945, 1241 |
| BmsI | GCATC | 3 cut(s) | 422, 437, 638 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 127, 159 |
| Bpu10I | CCTNAGC | 2 cut(s) | 66, 885 |
| Bpu14I | TTCGAA | 1 cut(s) | 558 |
| BpuMI | CCSGG | 1 cut(s) | 945 |
| Bsa29I | ATCGAT | 1 cut(s) | 810 |
| BsaJI | CCNNGG | 3 cut(s) | 294, 706, 1248 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 483, 1267 |
| Bse1I | ACTGG | 1 cut(s) | 727 |
| BseBI | CCWGG | 1 cut(s) | 1241 |
| BseCI | ATCGAT | 1 cut(s) | 810 |
| BseDI | CCNNGG | 3 cut(s) | 294, 706, 1248 |
| BseGI | GGATG | 5 cut(s) | 131, 378, 629, 752, 953 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 483, 1267 |
| BseMII | CTCAG | 4 cut(s) | 57, 125, 350, 876 |
| BseNI | ACTGG | 1 cut(s) | 727 |
| BseXI | GCAGC | 4 cut(s) | 49, 365, 776, 880 |
| BseYI | CCCAGC | 1 cut(s) | 180 |
| BshFI | GGCC | 2 cut(s) | 210, 960 |
| BshNI | GGYRCC | 1 cut(s) | 254 |
| BshVI | ATCGAT | 1 cut(s) | 810 |
| BsiHKAI | GWGCWC | 1 cut(s) | 516 |
| BsiSI | CCGG | 1 cut(s) | 944 |
| BslFI | GGGAC | 2 cut(s) | 500, 1033 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 483, 1267 |
| BsmAI | GTCTC | 3 cut(s) | 243, 317, 1302 |
| BsmBI | CGTCTC | 1 cut(s) | 243 |
| BsmFI | GGGAC | 2 cut(s) | 500, 1033 |
| BsmI | GAATGC | 1 cut(s) | 328 |
| BsnI | GGCC | 2 cut(s) | 210, 960 |
| Bsp119I | TTCGAA | 1 cut(s) | 558 |
| Bsp1286I | GDGCHC | 2 cut(s) | 133, 516 |
| Bsp1407I | TGTACA | 1 cut(s) | 74 |
| Bsp143I | GATC | 6 cut(s) | 222, 496, 710, 829, 954, 1176 |
| BspACI | CCGC | 3 cut(s) | 381, 659, 1286 |
| BspANI | GGCC | 2 cut(s) | 210, 960 |
| BspCNI | CTCAG | 4 cut(s) | 58, 126, 349, 877 |
| BspDI | ATCGAT | 1 cut(s) | 810 |
| BspLI | GGNNCC | 4 cut(s) | 256, 488, 489, 1021 |
| BspPI | GGATC | 3 cut(s) | 230, 718, 824 |
| BspT104I | TTCGAA | 1 cut(s) | 558 |
| BspT107I | GGYRCC | 1 cut(s) | 254 |
| BsrGI | TGTACA | 1 cut(s) | 74 |
| BsrI | ACTGG | 1 cut(s) | 727 |
| BssECI | CCNNGG | 3 cut(s) | 294, 706, 1248 |
| BssMI | GATC | 6 cut(s) | 222, 496, 710, 829, 954, 1176 |
| BssSI | CACGAG | 1 cut(s) | 1172 |
| BssT1I | CCWWGG | 2 cut(s) | 706, 1248 |
| Bst2BI | CACGAG | 1 cut(s) | 1172 |
| Bst2UI | CCWGG | 1 cut(s) | 1241 |
| Bst4CI | ACNGT | 8 cut(s) | 238, 254, 320, 469, 481, 991, 1148, 1312 |
| Bst6I | CTCTTC | 1 cut(s) | 150 |
| BstAUI | TGTACA | 1 cut(s) | 74 |
| BstBI | TTCGAA | 1 cut(s) | 558 |
| BstC8I | GCNNGC | 3 cut(s) | 44, 663, 681 |
| BstDEI | CTNAG | 5 cut(s) | 66, 134, 167, 336, 885 |
| BstDSI | CCRYGG | 1 cut(s) | 294 |
| BstF5I | GGATG | 5 cut(s) | 131, 378, 629, 752, 953 |
| BstHHI | GCGC | 1 cut(s) | 42 |
| BstKTI | GATC | 6 cut(s) | 225, 499, 713, 832, 957, 1179 |
| BstMAI | GTCTC | 3 cut(s) | 243, 317, 1302 |
| BstMBI | GATC | 6 cut(s) | 222, 496, 710, 829, 954, 1176 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 68, 128, 387, 442, 451, 890 |
| BstNI | CCWGG | 1 cut(s) | 1241 |
| BstNSI | RCATGY | 1 cut(s) | 46 |
| BstSCI | CCNGG | 2 cut(s) | 943, 1239 |
| BstSFI | CTRYAG | 1 cut(s) | 1045 |
| BstV1I | GCAGC | 4 cut(s) | 49, 365, 776, 880 |
| BstX2I | RGATCY | 3 cut(s) | 222, 829, 1176 |
| BstYI | RGATCY | 3 cut(s) | 222, 829, 1176 |
| Bsu15I | ATCGAT | 1 cut(s) | 810 |
| BsuI | GTATCC | 2 cut(s) | 1255, 1300 |
| BsuRI | GGCC | 2 cut(s) | 210, 960 |
| BsuTUI | ATCGAT | 1 cut(s) | 810 |
| BtgI | CCRYGG | 1 cut(s) | 294 |
| BtgZI | GCGATG | 2 cut(s) | 287, 318 |
| BtsCI | GGATG | 5 cut(s) | 131, 378, 629, 752, 953 |
| BtsIMutI | CAGTG | 2 cut(s) | 477, 1144 |
| Cac8I | GCNNGC | 3 cut(s) | 44, 663, 681 |
| CaiI | CAGNNNCTG | 1 cut(s) | 833 |
| CfoI | GCGC | 1 cut(s) | 42 |
| Cfr13I | GGNCC | 5 cut(s) | 110, 487, 724, 959, 1020 |
| ClaI | ATCGAT | 1 cut(s) | 810 |
| CsiI | ACCWGGT | 1 cut(s) | 1239 |
| Csp6I | GTAC | 2 cut(s) | 6, 75 |
| CviAII | CATG | 3 cut(s) | 43, 85, 432 |
| CviQI | GTAC | 2 cut(s) | 6, 75 |
| DdeI | CTNAG | 5 cut(s) | 66, 134, 167, 336, 885 |
| DpnI | GATC | 6 cut(s) | 224, 498, 712, 831, 956, 1178 |
| DpnII | GATC | 6 cut(s) | 222, 496, 710, 829, 954, 1176 |
| Eam1104I | CTCTTC | 1 cut(s) | 150 |
| EarI | CTCTTC | 1 cut(s) | 150 |
| Eco130I | CCWWGG | 2 cut(s) | 706, 1248 |
| Eco24I | GRGCYC | 1 cut(s) | 133 |
| Eco47I | GGWCC | 4 cut(s) | 110, 487, 724, 1020 |
| Eco57I | CTGAAG | 1 cut(s) | 1322 |
| EcoO109I | RGGNCCY | 1 cut(s) | 487 |
| EcoRII | CCWGG | 1 cut(s) | 1239 |
| EcoT14I | CCWWGG | 2 cut(s) | 706, 1248 |
| EcoT38I | GRGCYC | 1 cut(s) | 133 |
| ErhI | CCWWGG | 2 cut(s) | 706, 1248 |
| Esp3I | CGTCTC | 1 cut(s) | 243 |
| FaeI | CATG | 3 cut(s) | 46, 88, 435 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 840, 872, 1322 |
| FaqI | GGGAC | 2 cut(s) | 500, 1033 |
| FatI | CATG | 3 cut(s) | 42, 84, 431 |
| FbaI | TGATCA | 1 cut(s) | 496 |
| Fnu4HI | GCNGC | 4 cut(s) | 63, 379, 765, 894 |
| FokI | GGATG | 5 cut(s) | 138, 385, 616, 739, 960 |
| FriOI | GRGCYC | 1 cut(s) | 133 |
| Fsp4HI | GCNGC | 4 cut(s) | 63, 379, 765, 894 |
| FspBI | CTAG | 6 cut(s) | 9, 194, 437, 998, 1088, 1110 |
| GlaI | GCGC | 1 cut(s) | 41 |
| GluI | GCNGC | 4 cut(s) | 63, 379, 765, 894 |
| GsaI | CCCAGC | 1 cut(s) | 184 |
| HaeIII | GGCC | 2 cut(s) | 210, 960 |
| HapII | CCGG | 1 cut(s) | 944 |
| HhaI | GCGC | 1 cut(s) | 42 |
| Hin1II | CATG | 3 cut(s) | 46, 88, 435 |
| Hin6I | GCGC | 1 cut(s) | 40 |
| HinP1I | GCGC | 1 cut(s) | 40 |
| HindIII | AAGCTT | 1 cut(s) | 854 |
| HinfI | GANTC | 1 cut(s) | 815 |
| HpaII | CCGG | 1 cut(s) | 944 |
| HphI | GGTGA | 2 cut(s) | 964, 1229 |
| Hpy166II | GTNNAC | 1 cut(s) | 1115 |
| Hpy188I | TCNGA | 7 cut(s) | 135, 222, 829, 981, 1005, 1153, 1302 |
| Hpy188III | TCNNGA | 4 cut(s) | 31, 226, 485, 1199 |
| Hpy8I | GTNNAC | 1 cut(s) | 1115 |
| HpyAV | CCTTC | 6 cut(s) | 221, 572, 682, 715, 1297, 1318 |
| HpyCH4III | ACNGT | 8 cut(s) | 238, 254, 320, 469, 481, 991, 1148, 1312 |
| HpyCH4IV | ACGT | 2 cut(s) | 878, 1117 |
| HpyCH4V | TGCA | 4 cut(s) | 454, 908, 1079, 1171 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 68, 128, 387, 442, 451, 890 |
| HpyF3I | CTNAG | 5 cut(s) | 66, 134, 167, 336, 885 |
| HpySE526I | ACGT | 2 cut(s) | 878, 1117 |
| Hsp92II | CATG | 3 cut(s) | 46, 88, 435 |
| HspAI | GCGC | 1 cut(s) | 40 |
| KflI | GGGWCCC | 1 cut(s) | 487 |
| Ksp22I | TGATCA | 1 cut(s) | 496 |
| Kzo9I | GATC | 6 cut(s) | 222, 496, 710, 829, 954, 1176 |
| LmnI | GCTCC | 2 cut(s) | 410, 533 |
| Lsp1109I | GCAGC | 4 cut(s) | 49, 365, 776, 880 |
| LweI | GCATC | 3 cut(s) | 422, 437, 638 |
| MabI | ACCWGGT | 1 cut(s) | 1239 |
| MaeI | CTAG | 6 cut(s) | 9, 194, 437, 998, 1088, 1110 |
| MaeII | ACGT | 2 cut(s) | 878, 1117 |
| MaeIII | GTNAC | 4 cut(s) | 170, 320, 339, 403 |
| MalI | GATC | 6 cut(s) | 224, 498, 712, 831, 956, 1178 |
| MboI | GATC | 6 cut(s) | 222, 496, 710, 829, 954, 1176 |
| MboII | GAAGA | 6 cut(s) | 137, 587, 1171, 1187, 1223, 1330 |
| MflI | RGATCY | 3 cut(s) | 222, 829, 1176 |
| MhlI | GDGCHC | 2 cut(s) | 133, 516 |
| MluCI | AATT | 3 cut(s) | 668, 672, 921 |
| MmeI | TCCRAC | 2 cut(s) | 226, 1111 |
| MroXI | GAANNNNTTC | 4 cut(s) | 546, 999, 1029, 1337 |
| MseI | TTAA | 4 cut(s) | 671, 699, 777, 986 |
| MspI | CCGG | 1 cut(s) | 944 |
| MspR9I | CCNGG | 2 cut(s) | 945, 1241 |
| Mva1269I | GAATGC | 1 cut(s) | 328 |
| MvaI | CCWGG | 1 cut(s) | 1241 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 68, 128, 387, 442, 451, 890 |
| NciI | CCSGG | 1 cut(s) | 945 |
| NdeII | GATC | 6 cut(s) | 222, 496, 710, 829, 954, 1176 |
| NlaIII | CATG | 3 cut(s) | 46, 88, 435 |
| NlaIV | GGNNCC | 4 cut(s) | 256, 488, 489, 1021 |
| NmuCI | GTSAC | 4 cut(s) | 170, 320, 339, 403 |
| NspI | RCATGY | 1 cut(s) | 46 |
| NspV | TTCGAA | 1 cut(s) | 558 |
| PaeI | GCATGC | 1 cut(s) | 46 |
| PctI | GAATGC | 1 cut(s) | 328 |
| PdmI | GAANNNNTTC | 4 cut(s) | 546, 999, 1029, 1337 |
| PfeI | GAWTC | 1 cut(s) | 815 |
| PflFI | GACNNNGTC | 1 cut(s) | 593 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1267 |
| PfoI | TCCNGGA | 1 cut(s) | 943 |
| PkrI | GCNGC | 4 cut(s) | 64, 380, 766, 895 |
| PpuMI | RGGWCCY | 1 cut(s) | 487 |
| PshBI | ATTAAT | 1 cut(s) | 671 |
| PsiI | TTATAA | 1 cut(s) | 749 |
| Psp5II | RGGWCCY | 1 cut(s) | 487 |
| Psp6I | CCWGG | 1 cut(s) | 1239 |
| PspFI | CCCAGC | 1 cut(s) | 180 |
| PspGI | CCWGG | 1 cut(s) | 1239 |
| PspN4I | GGNNCC | 4 cut(s) | 256, 488, 489, 1021 |
| PspPI | GGNCC | 5 cut(s) | 110, 487, 724, 959, 1020 |
| PspPPI | RGGWCCY | 1 cut(s) | 487 |
| PstNI | CAGNNNCTG | 1 cut(s) | 833 |
| PsuI | RGATCY | 3 cut(s) | 222, 829, 1176 |
| PsyI | GACNNNGTC | 1 cut(s) | 593 |
| RsaI | GTAC | 2 cut(s) | 7, 76 |
| RsaNI | GTAC | 2 cut(s) | 6, 75 |
| SaqAI | TTAA | 4 cut(s) | 671, 699, 777, 986 |
| SatI | GCNGC | 4 cut(s) | 63, 379, 765, 894 |
| Sau3AI | GATC | 6 cut(s) | 222, 496, 710, 829, 954, 1176 |
| Sau96I | GGNCC | 5 cut(s) | 110, 487, 724, 959, 1020 |
| ScaI | AGTACT | 1 cut(s) | 7 |
| ScrFI | CCNGG | 2 cut(s) | 945, 1241 |
| SduI | GDGCHC | 2 cut(s) | 133, 516 |
| SexAI | ACCWGGT | 1 cut(s) | 1239 |
| SfaNI | GCATC | 3 cut(s) | 422, 437, 638 |
| SfcI | CTRYAG | 1 cut(s) | 1045 |
| SfuI | TTCGAA | 1 cut(s) | 558 |
| SinI | GGWCC | 4 cut(s) | 110, 487, 724, 1020 |
| SpeI | ACTAGT | 1 cut(s) | 997 |
| SphI | GCATGC | 1 cut(s) | 46 |
| Sse9I | AATT | 3 cut(s) | 668, 672, 921 |
| SsiI | CCGC | 3 cut(s) | 381, 659, 1286 |
| SspMI | CTAG | 6 cut(s) | 9, 194, 437, 998, 1088, 1110 |
| StyD4I | CCNGG | 2 cut(s) | 943, 1239 |
| StyI | CCWWGG | 2 cut(s) | 706, 1248 |
| TaaI | ACNGT | 8 cut(s) | 238, 254, 320, 469, 481, 991, 1148, 1312 |
| TaiI | ACGT | 2 cut(s) | 881, 1120 |
| TaqI | TCGA | 2 cut(s) | 558, 810 |
| TaqII | GACCGA | 2 cut(s) | 127, 1037 |
| TasI | AATT | 3 cut(s) | 668, 672, 921 |
| TatI | WGTACW | 2 cut(s) | 5, 74 |
| TfiI | GAWTC | 1 cut(s) | 815 |
| Tru1I | TTAA | 4 cut(s) | 671, 699, 777, 986 |
| Tru9I | TTAA | 4 cut(s) | 671, 699, 777, 986 |
| TscAI | CASTG | 2 cut(s) | 484, 1151 |
| TseFI | GTSAC | 4 cut(s) | 170, 320, 339, 403 |
| TseI | GCWGC | 4 cut(s) | 62, 378, 764, 893 |
| Tsp45I | GTSAC | 4 cut(s) | 170, 320, 339, 403 |
| TspDTI | ATGAA | 4 cut(s) | 412, 539, 611, 828 |
| TspRI | CASTG | 2 cut(s) | 484, 1151 |
| Tth111I | GACNNNGTC | 1 cut(s) | 593 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1267 |
| VpaK11BI | GGWCC | 4 cut(s) | 110, 487, 724, 1020 |
| VspI | ATTAAT | 1 cut(s) | 671 |
| XceI | RCATGY | 1 cut(s) | 46 |
| XmnI | GAANNNNTTC | 4 cut(s) | 546, 999, 1029, 1337 |
| XspI | CTAG | 6 cut(s) | 9, 194, 437, 998, 1088, 1110 |
| ZrmI | AGTACT | 1 cut(s) | 7 |