Transcription factor
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 5 |
| AgsI | TTSAA | 1 cut(s) | 100 |
| AluBI | AGCT | 2 cut(s) | 24, 41 |
| AluI | AGCT | 2 cut(s) | 24, 41 |
| AoxI | GGCC | 1 cut(s) | 198 |
| ApeKI | GCWGC | 4 cut(s) | 24, 212, 215, 218 |
| BbsI | GAAGAC | 1 cut(s) | 107 |
| BbvI | GCAGC | 4 cut(s) | 11, 199, 202, 205 |
| BccI | CCATC | 1 cut(s) | 358 |
| BfaI | CTAG | 1 cut(s) | 326 |
| BisI | GCNGC | 4 cut(s) | 25, 213, 216, 219 |
| BlsI | GCNGC | 4 cut(s) | 26, 214, 217, 220 |
| BmsI | GCATC | 1 cut(s) | 199 |
| BpiI | GAAGAC | 1 cut(s) | 107 |
| BsaJI | CCNNGG | 1 cut(s) | 266 |
| BseDI | CCNNGG | 1 cut(s) | 266 |
| BseGI | GGATG | 1 cut(s) | 67 |
| BseRI | GAGGAG | 1 cut(s) | 213 |
| BseXI | GCAGC | 4 cut(s) | 11, 199, 202, 205 |
| BsgI | GTGCAG | 1 cut(s) | 362 |
| Bsh1285I | CGRYCG | 1 cut(s) | 310 |
| BshFI | GGCC | 1 cut(s) | 200 |
| BsiEI | CGRYCG | 1 cut(s) | 310 |
| BsnI | GGCC | 1 cut(s) | 200 |
| Bsp143I | GATC | 2 cut(s) | 275, 307 |
| BspACI | CCGC | 1 cut(s) | 5 |
| BspANI | GGCC | 1 cut(s) | 200 |
| BspQI | GCTCTTC | 1 cut(s) | 365 |
| BssECI | CCNNGG | 1 cut(s) | 266 |
| BssMI | GATC | 2 cut(s) | 275, 307 |
| Bst6I | CTCTTC | 3 cut(s) | 120, 189, 365 |
| BstC8I | GCNNGC | 1 cut(s) | 39 |
| BstF5I | GGATG | 1 cut(s) | 67 |
| BstKTI | GATC | 2 cut(s) | 278, 310 |
| BstMBI | GATC | 2 cut(s) | 275, 307 |
| BstMCI | CGRYCG | 1 cut(s) | 310 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 218, 227, 236 |
| BstV1I | GCAGC | 4 cut(s) | 11, 199, 202, 205 |
| BstV2I | GAAGAC | 1 cut(s) | 107 |
| BsuRI | GGCC | 1 cut(s) | 200 |
| BtsCI | GGATG | 1 cut(s) | 67 |
| Cac8I | GCNNGC | 1 cut(s) | 39 |
| CviAII | CATG | 1 cut(s) | 242 |
| CviJI | RGCY | 3 cut(s) | 24, 41, 200 |
| CviKI_1 | RGCY | 3 cut(s) | 24, 41, 200 |
| DpnI | GATC | 2 cut(s) | 277, 309 |
| DpnII | GATC | 2 cut(s) | 275, 307 |
| Eam1104I | CTCTTC | 3 cut(s) | 120, 189, 365 |
| EarI | CTCTTC | 3 cut(s) | 120, 189, 365 |
| FaeI | CATG | 1 cut(s) | 245 |
| FaiI | YATR | 3 cut(s) | 45, 47, 243 |
| FatI | CATG | 1 cut(s) | 241 |
| Fnu4HI | GCNGC | 4 cut(s) | 25, 213, 216, 219 |
| FokI | GGATG | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 4 cut(s) | 25, 213, 216, 219 |
| FspBI | CTAG | 1 cut(s) | 326 |
| GluI | GCNGC | 4 cut(s) | 25, 213, 216, 219 |
| HaeIII | GGCC | 1 cut(s) | 200 |
| Hin1II | CATG | 1 cut(s) | 245 |
| HindIII | AAGCTT | 1 cut(s) | 39 |
| HinfI | GANTC | 1 cut(s) | 291 |
| Hpy188I | TCNGA | 1 cut(s) | 312 |
| Hpy188III | TCNNGA | 1 cut(s) | 19 |
| HpyAV | CCTTC | 1 cut(s) | 323 |
| HpyCH4V | TGCA | 4 cut(s) | 27, 153, 175, 343 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 218, 227, 236 |
| Hsp92II | CATG | 1 cut(s) | 245 |
| Kzo9I | GATC | 2 cut(s) | 275, 307 |
| LguI | GCTCTTC | 1 cut(s) | 365 |
| LmnI | GCTCC | 2 cut(s) | 226, 256 |
| LpnPI | CCDG | 2 cut(s) | 240, 249 |
| Lsp1109I | GCAGC | 4 cut(s) | 11, 199, 202, 205 |
| LweI | GCATC | 1 cut(s) | 199 |
| MaeI | CTAG | 1 cut(s) | 326 |
| MalI | GATC | 2 cut(s) | 277, 309 |
| MboI | GATC | 2 cut(s) | 275, 307 |
| MboII | GAAGA | 8 cut(s) | 83, 112, 124, 127, 137, 206, 218, 379 |
| MluCI | AATT | 1 cut(s) | 376 |
| MnlI | CCTC | 6 cut(s) | 24, 190, 234, 261, 331, 357 |
| MseI | TTAA | 2 cut(s) | 80, 379 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 218, 227, 236 |
| NdeII | GATC | 2 cut(s) | 275, 307 |
| NlaIII | CATG | 1 cut(s) | 245 |
| PciSI | GCTCTTC | 1 cut(s) | 365 |
| PfeI | GAWTC | 1 cut(s) | 291 |
| PkrI | GCNGC | 4 cut(s) | 26, 214, 217, 220 |
| Ple19I | CGATCG | 1 cut(s) | 310 |
| PvuI | CGATCG | 1 cut(s) | 310 |
| SapI | GCTCTTC | 1 cut(s) | 365 |
| SaqAI | TTAA | 2 cut(s) | 80, 379 |
| SatI | GCNGC | 4 cut(s) | 25, 213, 216, 219 |
| Sau3AI | GATC | 2 cut(s) | 275, 307 |
| SetI | ASST | 4 cut(s) | 26, 43, 334, 342 |
| SfaNI | GCATC | 1 cut(s) | 199 |
| Sse9I | AATT | 1 cut(s) | 376 |
| SsiI | CCGC | 1 cut(s) | 5 |
| SspMI | CTAG | 1 cut(s) | 326 |
| TaqI | TCGA | 1 cut(s) | 18 |
| TasI | AATT | 1 cut(s) | 376 |
| TfiI | GAWTC | 1 cut(s) | 291 |
| Tru1I | TTAA | 2 cut(s) | 80, 379 |
| Tru9I | TTAA | 2 cut(s) | 80, 379 |
| TseI | GCWGC | 4 cut(s) | 24, 212, 215, 218 |
| TspDTI | ATGAA | 5 cut(s) | 78, 125, 207, 219, 276 |
| XspI | CTAG | 1 cut(s) | 326 |