Plant mobile domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PMD | PF10536 | 162 - 353 | 5.6e-06 | Plant mobile domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 610 |
| AciI | CCGC | 3 cut(s) | 1279, 1577, 2141 |
| AclWI | GGATC | 5 cut(s) | 623, 1662, 1785, 1953, 2000 |
| AcsI | RAATTY | 4 cut(s) | 521, 1459, 1768, 2057 |
| AcuI | CTGAAG | 1 cut(s) | 1689 |
| AcyI | GRCGYC | 1 cut(s) | 404 |
| AfaI | GTAC | 3 cut(s) | 305, 997, 1991 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 828, 1278 |
| AflIII | ACRYGT | 1 cut(s) | 1192 |
| AjiI | CACGTC | 1 cut(s) | 334 |
| AjnI | CCWGG | 1 cut(s) | 1036 |
| Alw21I | GWGCWC | 1 cut(s) | 570 |
| Alw26I | GTCTC | 5 cut(s) | 106, 854, 891, 1061, 1370 |
| Alw44I | GTGCAC | 1 cut(s) | 566 |
| AlwI | GGATC | 5 cut(s) | 623, 1662, 1785, 1953, 2000 |
| AoxI | GGCC | 5 cut(s) | 1245, 1758, 1848, 1887, 2334 |
| ApaLI | GTGCAC | 1 cut(s) | 566 |
| ApoI | RAATTY | 4 cut(s) | 521, 1459, 1768, 2057 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1154, 1186, 1586, 1618 |
| AseI | ATTAAT | 1 cut(s) | 968 |
| AsuC2I | CCSGG | 1 cut(s) | 744 |
| AsuHPI | GGTGA | 1 cut(s) | 38 |
| AsuII | TTCGAA | 1 cut(s) | 1404 |
| AxyI | CCTNAGG | 1 cut(s) | 823 |
| BaeGI | GKGCMC | 2 cut(s) | 570, 886 |
| BanI | GGYRCC | 1 cut(s) | 610 |
| BauI | CACGAG | 1 cut(s) | 885 |
| BbsI | GAAGAC | 4 cut(s) | 407, 1425, 2037, 2243 |
| Bbv12I | GWGCWC | 1 cut(s) | 570 |
| BbvCI | CCTCAGC | 1 cut(s) | 177 |
| BccI | CCATC | 6 cut(s) | 251, 822, 1192, 1468, 1574, 1655 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1820, 1854, 1859, 1893, 1898, 1932 |
| BciT130I | CCWGG | 1 cut(s) | 1038 |
| BclI | TGATCA | 1 cut(s) | 646 |
| BcnI | CCSGG | 1 cut(s) | 744 |
| BcoDI | GTCTC | 5 cut(s) | 106, 854, 891, 1061, 1370 |
| BfaI | CTAG | 1 cut(s) | 102 |
| BglII | AGATCT | 1 cut(s) | 1317 |
| BmcAI | AGTACT | 1 cut(s) | 997 |
| Bme1390I | CCNGG | 2 cut(s) | 744, 1038 |
| BmgBI | CACGTC | 1 cut(s) | 334 |
| BmiI | GGNNCC | 1 cut(s) | 612 |
| BmrFI | CCNGG | 2 cut(s) | 744, 1038 |
| BmrI | ACTGGG | 1 cut(s) | 889 |
| BmsI | GCATC | 8 cut(s) | 471, 790, 855, 1321, 1491, 1561, 1753, 2335 |
| BmuI | ACTGGG | 1 cut(s) | 889 |
| BpiI | GAAGAC | 4 cut(s) | 407, 1425, 2037, 2243 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1045, 1077 |
| BpmI | CTGGAG | 1 cut(s) | 1020 |
| Bpu10I | CCTNAGC | 1 cut(s) | 177 |
| Bpu14I | TTCGAA | 1 cut(s) | 1404 |
| BpuMI | CCSGG | 1 cut(s) | 744 |
| BsaAI | YACGTR | 1 cut(s) | 80 |
| BsaHI | GRCGYC | 1 cut(s) | 404 |
| BsaJI | CCNNGG | 4 cut(s) | 743, 1037, 1248, 2402 |
| BsaWI | WCCGGW | 1 cut(s) | 217 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1515, 1545 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 828, 1278 |
| Bse118I | RCCGGY | 1 cut(s) | 508 |
| Bse1I | ACTGG | 4 cut(s) | 56, 301, 884, 1615 |
| Bse21I | CCTNAGG | 1 cut(s) | 823 |
| Bse3DI | GCAATG | 3 cut(s) | 503, 1035, 2127 |
| BseBI | CCWGG | 1 cut(s) | 1038 |
| BseDI | CCNNGG | 4 cut(s) | 743, 1037, 1248, 2402 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 828, 1278 |
| BseMI | GCAATG | 3 cut(s) | 503, 1035, 2127 |
| BseMII | CTCAG | 7 cut(s) | 168, 381, 1548, 1746, 1836, 1875, 1914 |
| BseNI | ACTGG | 4 cut(s) | 56, 301, 884, 1615 |
| BseRI | GAGGAG | 6 cut(s) | 167, 248, 251, 883, 1689, 2349 |
| BseSI | GKGCMC | 2 cut(s) | 570, 886 |
| BsgI | GTGCAG | 2 cut(s) | 1188, 1323 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2446 |
| BshFI | GGCC | 5 cut(s) | 1247, 1760, 1850, 1889, 2336 |
| BshNI | GGYRCC | 1 cut(s) | 610 |
| BsiEI | CGRYCG | 1 cut(s) | 2446 |
| BsiHKAI | GWGCWC | 1 cut(s) | 570 |
| BsiSI | CCGG | 5 cut(s) | 74, 218, 509, 743, 2009 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 828, 1278 |
| BsmAI | GTCTC | 5 cut(s) | 106, 854, 891, 1061, 1370 |
| BsnI | GGCC | 5 cut(s) | 1247, 1760, 1850, 1889, 2336 |
| Bsp119I | TTCGAA | 1 cut(s) | 1404 |
| Bsp1286I | GDGCHC | 2 cut(s) | 570, 886 |
| BspACI | CCGC | 3 cut(s) | 1279, 1577, 2141 |
| BspANI | GGCC | 5 cut(s) | 1247, 1760, 1850, 1889, 2336 |
| BspCNI | CTCAG | 7 cut(s) | 169, 382, 1549, 1747, 1837, 1876, 1915 |
| BspHI | TCATGA | 2 cut(s) | 364, 705 |
| BspLI | GGNNCC | 1 cut(s) | 612 |
| BspPI | GGATC | 5 cut(s) | 623, 1662, 1785, 1953, 2000 |
| BspT104I | TTCGAA | 1 cut(s) | 1404 |
| BspT107I | GGYRCC | 1 cut(s) | 610 |
| BsrDI | GCAATG | 3 cut(s) | 503, 1035, 2127 |
| BsrFI | RCCGGY | 1 cut(s) | 508 |
| BsrI | ACTGG | 4 cut(s) | 56, 301, 884, 1615 |
| BssAI | RCCGGY | 1 cut(s) | 508 |
| BssECI | CCNNGG | 4 cut(s) | 743, 1037, 1248, 2402 |
| BssNI | GRCGYC | 1 cut(s) | 404 |
| BssSI | CACGAG | 1 cut(s) | 885 |
| Bst2BI | CACGAG | 1 cut(s) | 885 |
| Bst2UI | CCWGG | 1 cut(s) | 1038 |
| Bst4CI | ACNGT | 6 cut(s) | 272, 610, 801, 1160, 1252, 2098 |
| Bst6I | CTCTTC | 9 cut(s) | 144, 225, 1368, 1560, 1797, 1965, 1980, 2256, 2325 |
| BstACI | GRCGYC | 1 cut(s) | 404 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1087 |
| BstBAI | YACGTR | 1 cut(s) | 80 |
| BstBI | TTCGAA | 1 cut(s) | 1404 |
| BstC8I | GCNNGC | 3 cut(s) | 510, 921, 2175 |
| BstDSI | CCRYGG | 1 cut(s) | 1248 |
| BstMAI | GTCTC | 5 cut(s) | 106, 854, 891, 1061, 1370 |
| BstMCI | CGRYCG | 1 cut(s) | 2446 |
| BstNI | CCWGG | 1 cut(s) | 1038 |
| BstNSI | RCATGY | 1 cut(s) | 1196 |
| BstSCI | CCNGG | 2 cut(s) | 742, 1036 |
| BstSLI | GKGCMC | 2 cut(s) | 570, 886 |
| BstV2I | GAAGAC | 4 cut(s) | 407, 1425, 2037, 2243 |
| BstX2I | RGATCY | 1 cut(s) | 1317 |
| BstYI | RGATCY | 1 cut(s) | 1317 |
| Bsu36I | CCTNAGG | 1 cut(s) | 823 |
| BsuRI | GGCC | 5 cut(s) | 1247, 1760, 1850, 1889, 2336 |
| BtgI | CCRYGG | 1 cut(s) | 1248 |
| BtrI | CACGTC | 1 cut(s) | 334 |
| BtsIMutI | CAGTG | 7 cut(s) | 63, 277, 958, 1165, 1608, 2073, 2103 |
| Cac8I | GCNNGC | 3 cut(s) | 510, 921, 2175 |
| CciI | TCATGA | 2 cut(s) | 364, 705 |
| Cfr10I | RCCGGY | 1 cut(s) | 508 |
| CseI | GACGC | 2 cut(s) | 412, 1033 |
| Csp6I | GTAC | 3 cut(s) | 304, 996, 1990 |
| CviQI | GTAC | 3 cut(s) | 304, 996, 1990 |
| DraI | TTTAAA | 1 cut(s) | 516 |
| Eam1104I | CTCTTC | 9 cut(s) | 144, 225, 1368, 1560, 1797, 1965, 1980, 2256, 2325 |
| EarI | CTCTTC | 9 cut(s) | 144, 225, 1368, 1560, 1797, 1965, 1980, 2256, 2325 |
| Eco147I | AGGCCT | 1 cut(s) | 1889 |
| Eco57I | CTGAAG | 1 cut(s) | 1689 |
| Eco81I | CCTNAGG | 1 cut(s) | 823 |
| EcoRII | CCWGG | 1 cut(s) | 1036 |
| EcoT22I | ATGCAT | 2 cut(s) | 486, 848 |
| FauI | CCCGC | 2 cut(s) | 1272, 2134 |
| FbaI | TGATCA | 1 cut(s) | 646 |
| FspBI | CTAG | 1 cut(s) | 102 |
| GsuI | CTGGAG | 1 cut(s) | 1020 |
| HaeIII | GGCC | 5 cut(s) | 1247, 1760, 1850, 1889, 2336 |
| HapII | CCGG | 5 cut(s) | 74, 218, 509, 743, 2009 |
| HgaI | GACGC | 2 cut(s) | 412, 1033 |
| Hin1I | GRCGYC | 1 cut(s) | 404 |
| HincII | GTYRAC | 1 cut(s) | 819 |
| HindII | GTYRAC | 1 cut(s) | 819 |
| HindIII | AAGCTT | 2 cut(s) | 426, 2175 |
| HinfI | GANTC | 5 cut(s) | 702, 1033, 1054, 1391, 2427 |
| HpaII | CCGG | 5 cut(s) | 74, 218, 509, 743, 2009 |
| HphI | GGTGA | 1 cut(s) | 38 |
| Hpy166II | GTNNAC | 2 cut(s) | 568, 819 |
| Hpy188I | TCNGA | 4 cut(s) | 472, 562, 1396, 2448 |
| Hpy188III | TCNNGA | 9 cut(s) | 365, 476, 706, 1124, 1321, 1652, 1658, 1954, 2155 |
| Hpy8I | GTNNAC | 2 cut(s) | 568, 819 |
| HpyAV | CCTTC | 7 cut(s) | 334, 678, 1010, 1237, 1391, 1490, 1664 |
| HpyCH4III | ACNGT | 6 cut(s) | 272, 610, 801, 1160, 1252, 2098 |
| HpyCH4IV | ACGT | 2 cut(s) | 79, 333 |
| HpySE526I | ACGT | 2 cut(s) | 79, 333 |
| Hsp92I | GRCGYC | 1 cut(s) | 404 |
| KroI | GCCGGC | 1 cut(s) | 508 |
| KroNI | GCCGGC | 1 cut(s) | 510 |
| Ksp22I | TGATCA | 1 cut(s) | 646 |
| LmnI | GCTCC | 7 cut(s) | 76, 260, 745, 831, 2101, 2362, 2392 |
| LweI | GCATC | 8 cut(s) | 471, 790, 855, 1321, 1491, 1561, 1753, 2335 |
| MaeI | CTAG | 1 cut(s) | 102 |
| MaeII | ACGT | 2 cut(s) | 79, 333 |
| MaeIII | GTNAC | 3 cut(s) | 272, 961, 1160 |
| MflI | RGATCY | 1 cut(s) | 1317 |
| MhlI | GDGCHC | 2 cut(s) | 570, 886 |
| MluCI | AATT | 8 cut(s) | 521, 1011, 1064, 1076, 1459, 1768, 2057, 2189 |
| MlyI | GAGTC | 2 cut(s) | 1027, 1063 |
| Mph1103I | ATGCAT | 2 cut(s) | 486, 848 |
| MroNI | GCCGGC | 1 cut(s) | 508 |
| MseI | TTAA | 5 cut(s) | 515, 525, 728, 968, 1430 |
| MspA1I | CMGCKG | 2 cut(s) | 1346, 1382 |
| MspI | CCGG | 5 cut(s) | 74, 218, 509, 743, 2009 |
| MspR9I | CCNGG | 2 cut(s) | 744, 1038 |
| MvaI | CCWGG | 1 cut(s) | 1038 |
| NaeI | GCCGGC | 1 cut(s) | 510 |
| NciI | CCSGG | 1 cut(s) | 744 |
| NgoMIV | GCCGGC | 1 cut(s) | 508 |
| NlaIV | GGNNCC | 1 cut(s) | 612 |
| NmeAIII | GCCGAG | 1 cut(s) | 1012 |
| NmuCI | GTSAC | 2 cut(s) | 272, 1160 |
| NsiI | ATGCAT | 2 cut(s) | 486, 848 |
| NspI | RCATGY | 1 cut(s) | 1196 |
| NspV | TTCGAA | 1 cut(s) | 1404 |
| PagI | TCATGA | 2 cut(s) | 364, 705 |
| PceI | AGGCCT | 1 cut(s) | 1889 |
| PciI | ACATGT | 1 cut(s) | 1192 |
| PdiI | GCCGGC | 1 cut(s) | 510 |
| PfeI | GAWTC | 3 cut(s) | 702, 1391, 2427 |
| Ple19I | CGATCG | 1 cut(s) | 2446 |
| PleI | GAGTC | 2 cut(s) | 1027, 1062 |
| PpsI | GAGTC | 2 cut(s) | 1027, 1062 |
| Ppu21I | YACGTR | 1 cut(s) | 80 |
| PscI | ACATGT | 1 cut(s) | 1192 |
| PshBI | ATTAAT | 1 cut(s) | 968 |
| Psp6I | CCWGG | 1 cut(s) | 1036 |
| PspGI | CCWGG | 1 cut(s) | 1036 |
| PspN4I | GGNNCC | 1 cut(s) | 612 |
| PsuI | RGATCY | 1 cut(s) | 1317 |
| PvuI | CGATCG | 1 cut(s) | 2446 |
| PvuII | CAGCTG | 2 cut(s) | 1346, 1382 |
| RsaI | GTAC | 3 cut(s) | 305, 997, 1991 |
| RsaNI | GTAC | 3 cut(s) | 304, 996, 1990 |
| SaqAI | TTAA | 5 cut(s) | 515, 525, 728, 968, 1430 |
| ScaI | AGTACT | 1 cut(s) | 997 |
| SchI | GAGTC | 2 cut(s) | 1027, 1063 |
| ScrFI | CCNGG | 2 cut(s) | 744, 1038 |
| SduI | GDGCHC | 2 cut(s) | 570, 886 |
| SfaNI | GCATC | 8 cut(s) | 471, 790, 855, 1321, 1491, 1561, 1753, 2335 |
| SfuI | TTCGAA | 1 cut(s) | 1404 |
| Sse9I | AATT | 8 cut(s) | 521, 1011, 1064, 1076, 1459, 1768, 2057, 2189 |
| SseBI | AGGCCT | 1 cut(s) | 1889 |
| SsiI | CCGC | 3 cut(s) | 1279, 1577, 2141 |
| SspI | AATATT | 2 cut(s) | 1795, 1939 |
| SspMI | CTAG | 1 cut(s) | 102 |
| StuI | AGGCCT | 1 cut(s) | 1889 |
| StyD4I | CCNGG | 2 cut(s) | 742, 1036 |
| TaaI | ACNGT | 6 cut(s) | 272, 610, 801, 1160, 1252, 2098 |
| TaiI | ACGT | 2 cut(s) | 82, 336 |
| TaqI | TCGA | 6 cut(s) | 475, 1322, 1404, 1722, 2019, 2154 |
| TaqII | GACCGA | 1 cut(s) | 696 |
| TasI | AATT | 8 cut(s) | 521, 1011, 1064, 1076, 1459, 1768, 2057, 2189 |
| TatI | WGTACW | 3 cut(s) | 303, 995, 1989 |
| TfiI | GAWTC | 3 cut(s) | 702, 1391, 2427 |
| Tru1I | TTAA | 5 cut(s) | 515, 525, 728, 968, 1430 |
| Tru9I | TTAA | 5 cut(s) | 515, 525, 728, 968, 1430 |
| TscAI | CASTG | 7 cut(s) | 63, 277, 958, 1165, 1615, 2080, 2103 |
| TseFI | GTSAC | 2 cut(s) | 272, 1160 |
| Tsp45I | GTSAC | 2 cut(s) | 272, 1160 |
| TspGWI | ACGGA | 3 cut(s) | 866, 1790, 1958 |
| TspRI | CASTG | 7 cut(s) | 63, 277, 958, 1165, 1615, 2080, 2103 |
| VneI | GTGCAC | 1 cut(s) | 566 |
| VspI | ATTAAT | 1 cut(s) | 968 |
| XapI | RAATTY | 4 cut(s) | 521, 1459, 1768, 2057 |
| XceI | RCATGY | 1 cut(s) | 1196 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1279 |
| XspI | CTAG | 1 cut(s) | 102 |
| ZrmI | AGTACT | 1 cut(s) | 997 |
| Zsp2I | ATGCAT | 2 cut(s) | 486, 848 |