RLG00000036334

G-type lectin S-receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0001337
Physical Location & Seq
Reverse (-)
79344413 .. 79345508
1096 bp
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UTR
Exon/CDS
Intron
RLM00000036334

Sequence Viewer

Length: 360 bp
ATGAGGAATGATAGTGCTGGAGGTGGACAGACTGAAACAGAACTACCAATCTCTAGTTTAAGGAGTCTATTAGCTAATACCAACAATTTCTATGAAGCTAAGAAACTAGGAGAGGGAGGGTTTGGCCATGTTTATAAGCTGCAACACTTCCACACTACTCTTCTTCATGATTCTAGTAGTTTCCCTCAGATTCATGATGCGCAGCAGCAGCTCAAGTGGTATGCTTTCTTTTCTCTCCGTCAACAGTGTCATCATGGCTTTGTTTCATTCGAGACAAACCCAAACCCATGTAGAGAGGCTTGTAAGAAACCACCCCCAAAGCCCAAAGTTGAGGAGGATGCCTTGAAGTTGTTCTGTTAA

Protein Analysis

120

Amino Acids

13.51

Weight (kDa)

7.74

Isoelectric Point (pI)

49.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 135
Acc16I TGCGCA 1 cut(s) 201
AcoI YGGCCR 1 cut(s) 124
AgsI TTSAA 1 cut(s) 346
AluBI AGCT 4 cut(s) 74, 98, 139, 211
AluI AGCT 4 cut(s) 74, 98, 139, 211
Alw26I GTCTC 1 cut(s) 266
AoxI GGCC 1 cut(s) 124
ApeKI GCWGC 4 cut(s) 139, 202, 205, 208
Asp700I GAANNNNTTC 1 cut(s) 350
AspLEI GCGC 1 cut(s) 202
BalI TGGCCA 1 cut(s) 126
BbvI GCAGC 4 cut(s) 126, 214, 217, 220
BcoDI GTCTC 1 cut(s) 266
BfaI CTAG 3 cut(s) 54, 107, 174
BisI GCNGC 4 cut(s) 140, 203, 206, 209
BlsI GCNGC 4 cut(s) 141, 204, 207, 210
BmsI GCATC 2 cut(s) 187, 328
BpmI CTGGAG 1 cut(s) 39
BpuEI CTTGAG 1 cut(s) 197
BseGI GGATG 1 cut(s) 343
BseMII CTCAG 1 cut(s) 200
BseRI GAGGAG 1 cut(s) 347
BseXI GCAGC 4 cut(s) 126, 214, 217, 220
BshFI GGCC 1 cut(s) 126
BsmAI GTCTC 1 cut(s) 266
BsnI GGCC 1 cut(s) 126
BspANI GGCC 1 cut(s) 126
BspCNI CTCAG 1 cut(s) 199
BspHI TCATGA 2 cut(s) 166, 193
Bst4CI ACNGT 1 cut(s) 246
Bst6I CTCTTC 1 cut(s) 165
BstDEI CTNAG 2 cut(s) 99, 186
BstF5I GGATG 1 cut(s) 343
BstHHI GCGC 1 cut(s) 202
BstMAI GTCTC 1 cut(s) 266
BstMWI GCNNNNNNNGC 1 cut(s) 208
BstV1I GCAGC 4 cut(s) 126, 214, 217, 220
BsuRI GGCC 1 cut(s) 126
BtsCI GGATG 1 cut(s) 343
BtsIMutI CAGTG 1 cut(s) 251
CciI TCATGA 2 cut(s) 166, 193
CfoI GCGC 1 cut(s) 202
CviAII CATG 5 cut(s) 128, 167, 194, 254, 288
CviJI RGCY 8 cut(s) 74, 98, 126, 139, 211, 258, 299, 322
CviKI_1 RGCY 8 cut(s) 74, 98, 126, 139, 211, 258, 299, 322
DdeI CTNAG 2 cut(s) 99, 186
EaeI YGGCCR 1 cut(s) 124
Eam1104I CTCTTC 1 cut(s) 165
EarI CTCTTC 1 cut(s) 165
FaeI CATG 5 cut(s) 131, 170, 197, 257, 291
FaiI YATR 8 cut(s) 93, 129, 135, 168, 195, 222, 255, 289
FatI CATG 5 cut(s) 127, 166, 193, 253, 287
Fnu4HI GCNGC 4 cut(s) 140, 203, 206, 209
FokI GGATG 1 cut(s) 350
Fsp4HI GCNGC 4 cut(s) 140, 203, 206, 209
FspBI CTAG 3 cut(s) 54, 107, 174
FspI TGCGCA 1 cut(s) 201
GlaI GCGC 1 cut(s) 201
GluI GCNGC 4 cut(s) 140, 203, 206, 209
GsuI CTGGAG 1 cut(s) 39
HaeIII GGCC 1 cut(s) 126
HhaI GCGC 1 cut(s) 202
Hin1II CATG 5 cut(s) 131, 170, 197, 257, 291
Hin6I GCGC 1 cut(s) 200
HinP1I GCGC 1 cut(s) 200
HincII GTYRAC 1 cut(s) 242
HindII GTYRAC 1 cut(s) 242
HinfI GANTC 3 cut(s) 64, 170, 190
Hpy166II GTNNAC 2 cut(s) 26, 242
Hpy188I TCNGA 1 cut(s) 189
Hpy188III TCNNGA 3 cut(s) 167, 194, 271
Hpy8I GTNNAC 2 cut(s) 26, 242
HpyCH4III ACNGT 1 cut(s) 246
HpyCH4V TGCA 1 cut(s) 142
HpyF10VI GCNNNNNNNGC 1 cut(s) 208
HpyF3I CTNAG 2 cut(s) 99, 186
Hsp92II CATG 5 cut(s) 131, 170, 197, 257, 291
HspAI GCGC 1 cut(s) 200
LpnPI CCDG 1 cut(s) 3
Lsp1109I GCAGC 4 cut(s) 126, 214, 217, 220
LweI GCATC 2 cut(s) 187, 328
MaeI CTAG 3 cut(s) 54, 107, 174
MboII GAAGA 2 cut(s) 152, 155
MlsI TGGCCA 1 cut(s) 126
MluCI AATT 1 cut(s) 85
MluNI TGGCCA 1 cut(s) 126
MlyI GAGTC 1 cut(s) 73
MnlI CCTC 7 cut(s) 14, 106, 110, 195, 289, 325, 328
Mox20I TGGCCA 1 cut(s) 126
MroXI GAANNNNTTC 1 cut(s) 350
MscI TGGCCA 1 cut(s) 126
MseI TTAA 2 cut(s) 59, 358
Msp20I TGGCCA 1 cut(s) 126
MwoI GCNNNNNNNGC 1 cut(s) 208
NlaIII CATG 5 cut(s) 131, 170, 197, 257, 291
NsbI TGCGCA 1 cut(s) 201
PagI TCATGA 2 cut(s) 166, 193
PdmI GAANNNNTTC 1 cut(s) 350
PfeI GAWTC 2 cut(s) 170, 190
PkrI GCNGC 4 cut(s) 141, 204, 207, 210
PleI GAGTC 1 cut(s) 72
PpsI GAGTC 1 cut(s) 72
PsiI TTATAA 1 cut(s) 135
SaqAI TTAA 2 cut(s) 59, 358
SatI GCNGC 4 cut(s) 140, 203, 206, 209
SchI GAGTC 1 cut(s) 73
SetI ASST 5 cut(s) 25, 76, 100, 141, 213
SfaNI GCATC 2 cut(s) 187, 328
SmlI CTYRAG 1 cut(s) 212
SmoI CTYRAG 1 cut(s) 212
Sse9I AATT 1 cut(s) 85
SspMI CTAG 3 cut(s) 54, 107, 174
TaaI ACNGT 1 cut(s) 246
TaqI TCGA 1 cut(s) 270
TasI AATT 1 cut(s) 85
TfiI GAWTC 2 cut(s) 170, 190
Tru1I TTAA 2 cut(s) 59, 358
Tru9I TTAA 2 cut(s) 59, 358
TscAI CASTG 1 cut(s) 251
TseI GCWGC 4 cut(s) 139, 202, 205, 208
TspDTI ATGAA 4 cut(s) 108, 155, 182, 255
TspGWI ACGGA 1 cut(s) 227
TspRI CASTG 1 cut(s) 251
XmnI GAANNNNTTC 1 cut(s) 350
XspI CTAG 3 cut(s) 54, 107, 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.