Rmu_co8173660.1_g000001

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8173660.1
Physical Location & Seq
Forward (+)
1 .. 631
631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8173660.1_g000001.1.cds

Sequence Viewer

Length: 317 bp
agataggagtgatagttgcttctgccgttgctgtaattcttgcgatgttgttatttggctattgttacattctcagactcagacgcaggaaaagtttcaaaggtactcaaaacaacattgaagagcagaaggatgaagacctggagctgccattgttcgacttgccaacaatagaggctgctaccaataaattctcaatcaataataaacttggagaaggtggttttggacctgtgtacaagggtacactaatagatggaaaagaaattgcagtgaagcggctctcaagaaggagaggagaaattgctgatctatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

104

Amino Acids

11.57

Weight (kDa)

9.17

Isoelectric Point (pI)

65.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 279
AcsI RAATTY 1 cut(s) 190
AfaI GTAC 3 cut(s) 105, 238, 246
AgsI TTSAA 2 cut(s) 99, 121
AjnI CCWGG 1 cut(s) 140
AjuI GAANNNNNNNTTGG 2 cut(s) 209, 241
AluBI AGCT 1 cut(s) 147
AluI AGCT 1 cut(s) 147
ApeKI GCWGC 2 cut(s) 147, 178
ApoI RAATTY 1 cut(s) 190
Asp700I GAANNNNTTC 1 cut(s) 94
AspS9I GGNCC 1 cut(s) 229
AvaII GGWCC 1 cut(s) 229
BbsI GAAGAC 1 cut(s) 143
BbvI GCAGC 2 cut(s) 134, 165
BccI CCATC 1 cut(s) 250
BceAI ACGGC 1 cut(s) 10
BciT130I CCWGG 1 cut(s) 142
BisI GCNGC 3 cut(s) 148, 179, 280
BlsI GCNGC 3 cut(s) 149, 180, 281
Bme1390I CCNGG 1 cut(s) 142
Bme18I GGWCC 1 cut(s) 229
BmgT120I GGNCC 1 cut(s) 229
BmrFI CCNGG 1 cut(s) 142
BpiI GAAGAC 1 cut(s) 143
BpmI CTGGAG 1 cut(s) 163
BpuEI CTTGAG 1 cut(s) 270
BsaXI ACNNNNNCTCC 1 cut(s) 29
BseBI CCWGG 1 cut(s) 142
BseGI GGATG 1 cut(s) 138
BseMII CTCAG 2 cut(s) 87, 93
BseRI GAGGAG 1 cut(s) 311
BseXI GCAGC 2 cut(s) 134, 165
Bsp1407I TGTACA 1 cut(s) 236
Bsp143I GATC 1 cut(s) 309
BspACI CCGC 1 cut(s) 279
BspCNI CTCAG 2 cut(s) 86, 92
BspQI GCTCTTC 1 cut(s) 116
BsrGI TGTACA 1 cut(s) 236
BssMI GATC 1 cut(s) 309
Bst2UI CCWGG 1 cut(s) 142
Bst6I CTCTTC 1 cut(s) 116
BstAUI TGTACA 1 cut(s) 236
BstDEI CTNAG 2 cut(s) 73, 79
BstF5I GGATG 1 cut(s) 138
BstKTI GATC 1 cut(s) 312
BstMBI GATC 1 cut(s) 309
BstNI CCWGG 1 cut(s) 142
BstSCI CCNGG 1 cut(s) 140
BstV1I GCAGC 2 cut(s) 134, 165
BstV2I GAAGAC 1 cut(s) 143
BtgZI GCGATG 1 cut(s) 58
BtsCI GGATG 1 cut(s) 138
BtsI GCAGTG 1 cut(s) 278
BtsIMutI CAGTG 1 cut(s) 278
Cfr13I GGNCC 1 cut(s) 229
CseI GACGC 1 cut(s) 92
Csp6I GTAC 3 cut(s) 104, 237, 245
CviJI RGCY 4 cut(s) 59, 147, 178, 282
CviKI_1 RGCY 4 cut(s) 59, 147, 178, 282
CviQI GTAC 3 cut(s) 104, 237, 245
DdeI CTNAG 2 cut(s) 73, 79
DpnI GATC 1 cut(s) 311
DpnII GATC 1 cut(s) 309
Eam1104I CTCTTC 1 cut(s) 116
EarI CTCTTC 1 cut(s) 116
Eco47I GGWCC 1 cut(s) 229
EcoRII CCWGG 1 cut(s) 140
FaiI YATR 1 cut(s) 315
Fnu4HI GCNGC 3 cut(s) 148, 179, 280
FokI GGATG 1 cut(s) 145
Fsp4HI GCNGC 3 cut(s) 148, 179, 280
GluI GCNGC 3 cut(s) 148, 179, 280
GsuI CTGGAG 1 cut(s) 163
HgaI GACGC 1 cut(s) 92
HinfI GANTC 1 cut(s) 77
Hpy166II GTNNAC 2 cut(s) 237, 247
Hpy188I TCNGA 2 cut(s) 76, 82
Hpy188III TCNNGA 1 cut(s) 287
Hpy8I GTNNAC 2 cut(s) 237, 247
HpyAV CCTTC 3 cut(s) 123, 211, 284
HpyCH4V TGCA 1 cut(s) 271
HpyF3I CTNAG 2 cut(s) 73, 79
Kzo9I GATC 1 cut(s) 309
LguI GCTCTTC 1 cut(s) 116
LmnI GCTCC 1 cut(s) 144
LpnPI CCDG 4 cut(s) 72, 127, 154, 245
Lsp1109I GCAGC 2 cut(s) 134, 165
MaeIII GTNAC 1 cut(s) 64
MalI GATC 1 cut(s) 311
MboI GATC 1 cut(s) 309
MboII GAAGA 2 cut(s) 133, 148
MluCI AATT 4 cut(s) 35, 190, 266, 302
MlyI GAGTC 1 cut(s) 71
MnlI CCTC 2 cut(s) 168, 289
MroXI GAANNNNTTC 1 cut(s) 94
MspR9I CCNGG 1 cut(s) 142
MvaI CCWGG 1 cut(s) 142
NdeII GATC 1 cut(s) 309
PciSI GCTCTTC 1 cut(s) 116
PdmI GAANNNNTTC 1 cut(s) 94
PkrI GCNGC 3 cut(s) 149, 180, 281
PleI GAGTC 1 cut(s) 71
PpsI GAGTC 1 cut(s) 71
Psp6I CCWGG 1 cut(s) 140
PspGI CCWGG 1 cut(s) 140
PspPI GGNCC 1 cut(s) 229
RsaI GTAC 3 cut(s) 105, 238, 246
RsaNI GTAC 3 cut(s) 104, 237, 245
SapI GCTCTTC 1 cut(s) 116
SatI GCNGC 3 cut(s) 148, 179, 280
Sau3AI GATC 1 cut(s) 309
Sau96I GGNCC 1 cut(s) 229
SchI GAGTC 1 cut(s) 71
ScrFI CCNGG 1 cut(s) 142
SetI ASST 5 cut(s) 105, 143, 149, 222, 234
SgeI CNNG 9 cut(s) 52, 99, 153, 154, 174, 223, 244, 252, 299
SinI GGWCC 1 cut(s) 229
SmlI CTYRAG 1 cut(s) 285
SmoI CTYRAG 1 cut(s) 285
Sse9I AATT 4 cut(s) 35, 190, 266, 302
SsiI CCGC 1 cut(s) 279
StyD4I CCNGG 1 cut(s) 140
TaqI TCGA 1 cut(s) 158
TasI AATT 4 cut(s) 35, 190, 266, 302
TatI WGTACW 1 cut(s) 236
TauI GCSGC 1 cut(s) 282
TscAI CASTG 1 cut(s) 278
TseI GCWGC 2 cut(s) 147, 178
TspDTI ATGAA 1 cut(s) 149
TspRI CASTG 1 cut(s) 278
VpaK11BI GGWCC 1 cut(s) 229
XapI RAATTY 1 cut(s) 190
XmnI GAANNNNTTC 1 cut(s) 94
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.