Rh5AG249800

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
31660294 .. 31688102
27809 bp
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UTR
Exon/CDS
Intron
Rh5AG249800.1

Sequence Viewer

Length: 240 bp
ATGAGAGAAAAATGCATAAATTTAAAATGGCTACACCCTAAAGCTAACATTAGGTTCATTTATGCTATATCAGAGGCAGAGAAACGAGAAGAAAGGGCACAAAAGGAGGACCTGGAGCTCCCGCTCTTCAACATAAGCACAATAGCTAGTGCAACAGATAACTTTTCAGATGATATGAAGCTTGGAGAAGGTGGCTTTGGACCTGTTTACAGGGTAAACTTTCATCTTGCTTCAGAATAA

Protein Analysis

79

Amino Acids

9.1

Weight (kDa)

5.67

Isoelectric Point (pI)

36.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 124
AciI CCGC 1 cut(s) 122
AcsI RAATTY 1 cut(s) 19
AcuI CTGAAG 1 cut(s) 216
AgsI TTSAA 1 cut(s) 130
AjnI CCWGG 1 cut(s) 111
AjuI GAANNNNNNNTTGG 2 cut(s) 180, 212
AluBI AGCT 4 cut(s) 44, 118, 146, 181
AluI AGCT 4 cut(s) 44, 118, 146, 181
Alw21I GWGCWC 1 cut(s) 120
ApoI RAATTY 1 cut(s) 19
AspS9I GGNCC 2 cut(s) 109, 200
AvaII GGWCC 2 cut(s) 109, 200
BaeGI GKGCMC 1 cut(s) 100
BanII GRGCYC 1 cut(s) 120
Bbv12I GWGCWC 1 cut(s) 120
BciT130I CCWGG 1 cut(s) 113
BfaI CTAG 1 cut(s) 147
Bme1390I CCNGG 1 cut(s) 113
Bme18I GGWCC 2 cut(s) 109, 200
BmgT120I GGNCC 2 cut(s) 109, 200
BmrFI CCNGG 1 cut(s) 113
BpmI CTGGAG 1 cut(s) 134
BseBI CCWGG 1 cut(s) 113
BseSI GKGCMC 1 cut(s) 100
BsiHKAI GWGCWC 1 cut(s) 120
Bsp1286I GDGCHC 2 cut(s) 100, 120
BspACI CCGC 1 cut(s) 122
BspQI GCTCTTC 1 cut(s) 131
BsrBI CCGCTC 1 cut(s) 124
Bst2UI CCWGG 1 cut(s) 113
Bst6I CTCTTC 1 cut(s) 131
BstNI CCWGG 1 cut(s) 113
BstSCI CCNGG 1 cut(s) 111
BstSLI GKGCMC 1 cut(s) 100
Cfr13I GGNCC 2 cut(s) 109, 200
CviJI RGCY 6 cut(s) 31, 44, 118, 146, 181, 195
CviKI_1 RGCY 6 cut(s) 31, 44, 118, 146, 181, 195
DraI TTTAAA 1 cut(s) 24
Eam1104I CTCTTC 1 cut(s) 131
EarI CTCTTC 1 cut(s) 131
Ecl136II GAGCTC 1 cut(s) 118
Eco24I GRGCYC 1 cut(s) 120
Eco47I GGWCC 2 cut(s) 109, 200
Eco53kI GAGCTC 1 cut(s) 118
Eco57I CTGAAG 1 cut(s) 216
EcoICRI GAGCTC 1 cut(s) 118
EcoO109I RGGNCCY 1 cut(s) 109
EcoRII CCWGG 1 cut(s) 111
EcoT22I ATGCAT 1 cut(s) 17
EcoT38I GRGCYC 1 cut(s) 120
FaiI YATR 5 cut(s) 17, 63, 68, 134, 176
FauI CCCGC 1 cut(s) 129
FriOI GRGCYC 1 cut(s) 120
FspBI CTAG 1 cut(s) 147
GsuI CTGGAG 1 cut(s) 134
HindIII AAGCTT 1 cut(s) 179
Hpy166II GTNNAC 2 cut(s) 208, 217
Hpy188I TCNGA 3 cut(s) 73, 169, 235
Hpy8I GTNNAC 2 cut(s) 208, 217
HpyAV CCTTC 1 cut(s) 182
HpyCH4V TGCA 2 cut(s) 15, 152
LguI GCTCTTC 1 cut(s) 131
LmnI GCTCC 2 cut(s) 115, 123
LpnPI CCDG 4 cut(s) 98, 125, 196, 216
MaeI CTAG 1 cut(s) 147
MbiI CCGCTC 1 cut(s) 124
MboII GAAGA 2 cut(s) 101, 118
MhlI GDGCHC 2 cut(s) 100, 120
MluCI AATT 1 cut(s) 19
MnlI CCTC 2 cut(s) 67, 100
Mph1103I ATGCAT 1 cut(s) 17
MseI TTAA 1 cut(s) 23
MspR9I CCNGG 1 cut(s) 113
MvaI CCWGG 1 cut(s) 113
NsiI ATGCAT 1 cut(s) 17
PciSI GCTCTTC 1 cut(s) 131
PpuMI RGGWCCY 1 cut(s) 109
Psp124BI GAGCTC 1 cut(s) 120
Psp5II RGGWCCY 1 cut(s) 109
Psp6I CCWGG 1 cut(s) 111
PspGI CCWGG 1 cut(s) 111
PspPI GGNCC 2 cut(s) 109, 200
PspPPI RGGWCCY 1 cut(s) 109
SacI GAGCTC 1 cut(s) 120
SapI GCTCTTC 1 cut(s) 131
SaqAI TTAA 1 cut(s) 23
Sau96I GGNCC 2 cut(s) 109, 200
ScrFI CCNGG 1 cut(s) 113
SduI GDGCHC 2 cut(s) 100, 120
SetI ASST 8 cut(s) 46, 56, 114, 120, 148, 183, 193, 205
SgeI CNNG 8 cut(s) 98, 124, 125, 133, 159, 194, 215, 223
SinI GGWCC 2 cut(s) 109, 200
Sse9I AATT 1 cut(s) 19
SsiI CCGC 1 cut(s) 122
SspMI CTAG 1 cut(s) 147
SstI GAGCTC 1 cut(s) 120
StyD4I CCNGG 1 cut(s) 111
TasI AATT 1 cut(s) 19
Tru1I TTAA 1 cut(s) 23
Tru9I TTAA 1 cut(s) 23
TspDTI ATGAA 3 cut(s) 46, 191, 212
VpaK11BI GGWCC 2 cut(s) 109, 200
XapI RAATTY 1 cut(s) 19
XspI CTAG 1 cut(s) 147
Zsp2I ATGCAT 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.