Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000244.1

Orthogroup ID

OG0000685

Physical Location & Seq

Genomic Coordinates Forward (+)

8420 .. 11798

Gene Structure 3379 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000244.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

atggctcccctccacattttacaaccaagattctgccacgtcaccagatgctcaacacatctcccagtgggcccttacatcatcccccacctccagccgtcaccatccccatcaccacaaacaatccagagagaccaaaccttatgccttttaaaggatcacaaagctttgcaccgagttgcagttgccatggcagttgctacacgtgtctcccacagaacccattccgccattagtcccacctccgttttggctctggcttgccatttcttgcttctggtctcttcagccatcactccctgttttgggttttctggtgttggaggagaagatgagggaaacagaggaggggatttgtatcctgaaattttgagggatgaagctgtgtcaagacttcatcagctgggaaaggtaagtgatggtgatggctatcttgagaggatattcatgagcccgggggctgtgagggcaggaaatctaatccgcgaatggatggagaatgcgggtttgcgaacgtgggttgattgcttgggaaatatacatggtcgagttgagggaaggaatgctagtgctgaagctctgttaattggttcccatttggatactgttgttgatgccgggatatttgatgggtctttaggcataatttctgtgttatcagcattgaaggttttgagtatcaatggcaagttgggagaactaaagcggccggttgaggtaatagcgtttagtgatgaagaaggagtaaggtttcaatctacattcataggaagtgctgccatagctggaattttaccagtttcagcactgcaaataactgataaaagtggcgtgacaattcaagatgctcttaagaaaaactccgtagaagttacagaggagcacttgcagcagctcagatatgacccaaagtcagtttggggttatgttgagattcacattgaacaagggcctgtactggaatgggttggttttcctctaggagttgttaaaggcatagctggacagacaagactaaaggttatgatgagaggttcccagggccatgctggaacagttccaatgtccatgcgtcatgaccctatggctgctgctgcggaagccattgtattattagaaagcctatgtaagcatcctcaagattttctgtcttttgatggtgaatgcaaaagttactcattagaatcactttcaacttccctcgtttgtactgttggtgagatatcgacttggccaagtgcaagtaatgttattccaggacaggtaacattcacagtagatttacgtgcaattgatgacatgggacgtgaagctgtagtatatgaattatctaaccgattgtatcaaatatgtgatcggcgttcagtttcatgcacaattgatcggaagcatgatgcaaatgcagtcatttgcgattctgagttgacctcgaagctgaagtctgcagcttatcttgggctcaagagaatgacaggttctgttcacgatgaggtaccgatattaatgagtggagcaggacatgatgcaatggctctgtctcatttaactaaggtgggtatgctttttgtccgctgtcgaggaggcataagtcactcccctgaagaacatgtattggatgatgatgtttgggcatctggtttggcaatcctggcattcatagagactcagctctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000255 GO:0000256 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009987 GO:0010135 GO:0010136 GO:0012505 GO:0016787 GO:0016810 GO:0016813 GO:0017144 GO:0019439 GO:0034641 GO:0042737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043605 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046113 GO:0046483 GO:0046700 GO:0047652 GO:0055086 GO:0071704 GO:0072521 GO:0072523 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko01120 map00230 map01120

Pfam Domains

Protein Families

M20_dimer Peptidase_M20 Peptidase_M28

Protein Analysis

557

Amino Acids

60.21

Weight (kDa)

6.02

Isoelectric Point (pI)

42.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000685)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20070 AT4G20070
fragaria_vesca	FvH4_3g12850 FvH4_3g12850 FvH4_3g12850
malus_domestica	MD10G1228200.v1.1
prunus_persica	Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1
pyrus_communis	pycom10g19170
rosa_chinensis	RchiOBHm_Chr1g0315031 RchiOBHm_Chr1g0315061 RchiOBHm_Chr1g0315091 RchiOBHm_Chr1g0315141 RchiOBHm_Chr1g0315151 RchiOBHm_Chr1g0315201 RchiOBHm_Chr1g0315231 RchiOBHm_Chr1g0315241 RchiOBHm_Chr1g0315311 RchiOBHm_Chr1g0315381 RchiOBHm_Chr1g0315441 RchiOBHm_Chr1g0315471 RchiOBHm_Chr1g0315531 RchiOBHm_Chr1g0315541 RchiOBHm_Chr1g0315581 RchiOBHm_Chr1g0315591 RchiOBHm_Chr1g0315611 RchiOBHm_Chr5g0020791 RchiOBHm_Chr5g0020891 RchiOBHm_Chr5g0021441 RchiOBHm_Chr5g0021511 RchiOBHm_Chr5g0021521 RchiOBHm_Chr5g0029451 RchiOBHm_Chr5g0029471
rosa_laevigata	RLG00000030744 RLG00000030748 RLG00000032563 RLG00000032611
rosa_multiflora	Rmu_sc0000576.1_g000021 Rmu_sc0002052.1_g000003 Rmu_sc0004180.1_g000017 Rmu_sc0004180.1_g000030 Rmu_sc0004180.1_g000035 Rmu_sc0023070.1_g000002 Rmu_ssc0000244.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057130 Rroxscaffold_1G00057510 Rroxscaffold_4G00331580
rosa_rugosa	Rorug01G0004300 Rorug05G0063000 Rorug05G0067300
rosa_samantha	Rh1AG015000 Rh1AG015600 Rh1BG007400 Rh1BG007800 Rh1CG013200 Rh5AG152900 Rh5BG152700 Rh5BG155800 Rh5CG164200 Rh5CG164700 Rh5CG170000 Rh5CG227100
rosa_wichuraiana	Rw1G000740 Rw1G000780 Rw1G000810 Rw1G000840 Rw1G000870 Rw1G000900 Rw5G013560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1492
AccB1I	GGYRCC	1 cut(s)	1492
AccII	CGCG	1 cut(s)	486
AciI	CCGC	6 cut(s)	228, 484, 503, 706, 1097, 1570
AclWI	GGATC	1 cut(s)	165
AcoI	YGGCCR	2 cut(s)	707, 1232
AcsI	RAATTY	2 cut(s)	366, 789
AcuI	CTGAAG	4 cut(s)	270, 594, 1457, 1620
AcvI	CACGTG	1 cut(s)	206
AfaI	GTAC	3 cut(s)	957, 1210, 1494
AfiI	CCNNNNNNNGG	3 cut(s)	154, 305, 306
AflII	CTTAAG	1 cut(s)	851
AflIII	ACRYGT	3 cut(s)	203, 205, 1606
AgsI	TTSAA	5 cut(s)	667, 755, 842, 944, 1194
AhdI	GACNNNNNGTC	1 cut(s)	910
AjiI	CACGTC	2 cut(s)	40, 1307
AjnI	CCWGG	3 cut(s)	1038, 1255, 1647
Alw21I	GWGCWC	1 cut(s)	885
Alw26I	GTCTC	5 cut(s)	126, 214, 286, 1542, 1655
AlwI	GGATC	1 cut(s)	165
AlwNI	CAGNNNCTG	1 cut(s)	1478
Ama87I	CYCGRG	1 cut(s)	454
AoxI	GGCC	5 cut(s)	70, 707, 950, 1042, 1232
ApaI	GGGCCC	1 cut(s)	74
ApeKI	GCWGC	7 cut(s)	776, 889, 892, 1088, 1091, 1094, 1445
ApoI	RAATTY	2 cut(s)	366, 789
ArsI	GACNNNNNNTTYG	2 cut(s)	1424, 1456
AseI	ATTAAT	1 cut(s)	1502
Asp700I	GAANNNNTTC	1 cut(s)	223
Asp718I	GGTACC	1 cut(s)	1492
AspS9I	GGNCC	4 cut(s)	70, 71, 950, 1042
AsuC2I	CCSGG	3 cut(s)	455, 456, 619
AsuHPI	GGTGA	6 cut(s)	34, 93, 105, 434, 1172, 1229
AvaI	CYCGRG	1 cut(s)	454
BaeGI	GKGCMC	1 cut(s)	74
BaeI	ACNNNNGTAYC	2 cut(s)	594, 627
BalI	TGGCCA	1 cut(s)	1234
BanI	GGYRCC	1 cut(s)	1492
BanII	GRGCYC	3 cut(s)	74, 455, 1461
BbrPI	CACGTG	1 cut(s)	206
Bbv12I	GWGCWC	1 cut(s)	885
BbvI	GCAGC	7 cut(s)	763, 901, 904, 1075, 1078, 1081, 1457
BccI	CCATC	8 cut(s)	112, 118, 299, 413, 419, 487, 623, 1151
BceAI	ACGGC	1 cut(s)	82
BciT130I	CCWGG	3 cut(s)	1040, 1257, 1649
BciVI	GTATCC	2 cut(s)	369, 595
BcnI	CCSGG	3 cut(s)	455, 456, 619
BcoDI	GTCTC	5 cut(s)	126, 214, 286, 1542, 1655
BfaI	CTAG	3 cut(s)	567, 980, 1672
BfmI	CTRYAG	2 cut(s)	1314, 1443
BfrI	CTTAAG	1 cut(s)	851
BfuI	GTATCC	2 cut(s)	369, 595
BisI	GCNGC	8 cut(s)	707, 777, 890, 893, 1089, 1092, 1095, 1446
BlsI	GCNGC	8 cut(s)	708, 778, 891, 894, 1090, 1093, 1096, 1447
Bme1390I	CCNGG	6 cut(s)	455, 456, 619, 1040, 1257, 1649
BmeRI	GACNNNNNGTC	1 cut(s)	910
BmeT110I	CYCGRG	1 cut(s)	454
BmgBI	CACGTC	2 cut(s)	40, 1307
BmgT120I	GGNCC	4 cut(s)	70, 71, 950, 1042
BmiI	GGNNCC	5 cut(s)	6, 72, 592, 1036, 1494
BmrFI	CCNGG	6 cut(s)	455, 456, 619, 1040, 1257, 1649
BmrI	ACTGGG	1 cut(s)	59
BmsI	GCATC	7 cut(s)	38, 604, 835, 1141, 1384, 1513, 1640
BmuI	ACTGGG	1 cut(s)	59
BplI	GAGNNNNNCTC	2 cut(s)	1412, 1444
BpmI	CTGGAG	1 cut(s)	77
BpuEI	CTTGAG	3 cut(s)	455, 1122, 1445
BpuMI	CCSGG	3 cut(s)	455, 456, 619
BsaAI	YACGTR	2 cut(s)	206, 1286
BsaBI	GATNNNNATC	2 cut(s)	357, 429
BsaI	GGTCTC	2 cut(s)	126, 286
BsaJI	CCNNGG	5 cut(s)	189, 454, 455, 1038, 1039
Bsc4I	CCNNNNNNNGG	3 cut(s)	154, 305, 306
Bse118I	RCCGGY	1 cut(s)	709
Bse1I	ACTGG	3 cut(s)	65, 797, 963
Bse3DI	GCAATG	1 cut(s)	1533
Bse8I	GATNNNNATC	2 cut(s)	357, 429
BseBI	CCWGG	3 cut(s)	1040, 1257, 1649
BseDI	CCNNGG	5 cut(s)	189, 454, 455, 1038, 1039
BseGI	GGATG	6 cut(s)	81, 104, 382, 498, 1132, 1621
BseJI	GATNNNNATC	2 cut(s)	357, 429
BseLI	CCNNNNNNNGG	3 cut(s)	154, 305, 306
BseMI	GCAATG	1 cut(s)	1533
BseMII	CTCAG	2 cut(s)	910, 1410
BseNI	ACTGG	3 cut(s)	65, 797, 963
BseRI	GAGGAG	4 cut(s)	339, 360, 893, 1593
BseSI	GKGCMC	1 cut(s)	74
BseX3I	CGGCCG	1 cut(s)	707
BseXI	GCAGC	7 cut(s)	763, 901, 904, 1075, 1078, 1081, 1457
BseYI	CCCAGC	1 cut(s)	403
Bsh1236I	CGCG	1 cut(s)	486
Bsh1285I	CGRYCG	1 cut(s)	710
BshFI	GGCC	5 cut(s)	72, 709, 952, 1044, 1234
BshNI	GGYRCC	1 cut(s)	1492
BsiEI	CGRYCG	1 cut(s)	710
BsiHKAI	GWGCWC	1 cut(s)	885
BsiHKCI	CYCGRG	1 cut(s)	454
BsiSI	CCGG	3 cut(s)	455, 618, 710
BslFI	GGGAC	2 cut(s)	222, 1317
BslI	CCNNNNNNNGG	3 cut(s)	154, 305, 306
BsmAI	GTCTC	5 cut(s)	126, 214, 286, 1542, 1655
BsmFI	GGGAC	2 cut(s)	222, 1317
BsmI	GAATGC	4 cut(s)	505, 568, 1169, 1652
BsnI	GGCC	5 cut(s)	72, 709, 952, 1044, 1234
Bso31I	GGTCTC	2 cut(s)	126, 286
BsoBI	CYCGRG	1 cut(s)	454
Bsp120I	GGGCCC	1 cut(s)	70
Bsp1286I	GDGCHC	4 cut(s)	74, 455, 885, 1461
Bsp143I	GATC	3 cut(s)	157, 1354, 1381
Bsp19I	CCATGG	1 cut(s)	189
BspACI	CCGC	6 cut(s)	228, 484, 503, 706, 1097, 1570
BspANI	GGCC	5 cut(s)	72, 709, 952, 1044, 1234
BspCNI	CTCAG	2 cut(s)	909, 1411
BspFNI	CGCG	1 cut(s)	486
BspHI	TCATGA	2 cut(s)	447, 1075
BspLI	GGNNCC	5 cut(s)	6, 72, 592, 1036, 1494
BspMAI	CTGCAG	1 cut(s)	1447
BspPI	GGATC	1 cut(s)	165
BspT107I	GGYRCC	1 cut(s)	1492
BspTI	CTTAAG	1 cut(s)	851
BspTNI	GGTCTC	2 cut(s)	126, 286
BsrDI	GCAATG	1 cut(s)	1533
BsrFI	RCCGGY	1 cut(s)	709
BsrI	ACTGG	3 cut(s)	65, 797, 963
BssAI	RCCGGY	1 cut(s)	709
BssECI	CCNNGG	5 cut(s)	189, 454, 455, 1038, 1039
BssMI	GATC	3 cut(s)	157, 1354, 1381
BssT1I	CCWWGG	1 cut(s)	189
Bst2UI	CCWGG	3 cut(s)	1040, 1257, 1649
Bst4CI	ACNGT	4 cut(s)	607, 1057, 1213, 1276
Bst6I	CTCTTC	1 cut(s)	289
BstAFI	CTTAAG	1 cut(s)	851
BstBAI	YACGTR	2 cut(s)	206, 1286
BstC8I	GCNNGC	1 cut(s)	262
BstDEI	CTNAG	4 cut(s)	896, 1419, 1548, 1665
BstDSI	CCRYGG	1 cut(s)	189
BstENI	CCTNNNNNAGG	1 cut(s)	152
BstF5I	GGATG	6 cut(s)	81, 104, 382, 498, 1132, 1621
BstFNI	CGCG	1 cut(s)	486
BstKTI	GATC	3 cut(s)	160, 1357, 1384
BstMAI	GTCTC	5 cut(s)	126, 214, 286, 1542, 1655
BstMBI	GATC	3 cut(s)	157, 1354, 1381
BstMCI	CGRYCG	1 cut(s)	710
BstMWI	GCNNNNNNNGC	6 cut(s)	467, 782, 889, 1094, 1100, 1649
BstNI	CCWGG	3 cut(s)	1040, 1257, 1649
BstNSI	RCATGY	1 cut(s)	1610
BstSCI	CCNGG	6 cut(s)	453, 454, 617, 1038, 1255, 1647
BstSFI	CTRYAG	2 cut(s)	1314, 1443
BstSLI	GKGCMC	1 cut(s)	74
BstUI	CGCG	1 cut(s)	486
BstV1I	GCAGC	7 cut(s)	763, 901, 904, 1075, 1078, 1081, 1457
BstZI	CGGCCG	1 cut(s)	707
BsuI	GTATCC	2 cut(s)	369, 595
BsuRI	GGCC	5 cut(s)	72, 709, 952, 1044, 1234
BtgI	CCRYGG	1 cut(s)	189
BtrI	CACGTC	2 cut(s)	40, 1307
BtsCI	GGATG	6 cut(s)	81, 104, 382, 498, 1132, 1621
BtsI	GCAGTG	1 cut(s)	806
BtsIMutI	CAGTG	2 cut(s)	72, 806
Cac8I	GCNNGC	1 cut(s)	262
CaiI	CAGNNNCTG	1 cut(s)	1478
CciI	TCATGA	2 cut(s)	447, 1075
Cfr10I	RCCGGY	1 cut(s)	709
Cfr13I	GGNCC	4 cut(s)	70, 71, 950, 1042
Cfr9I	CCCGGG	1 cut(s)	454
CseI	GACGC	1 cut(s)	1061
Csp6I	GTAC	3 cut(s)	956, 1209, 1493
CviQI	GTAC	3 cut(s)	956, 1209, 1493
DdeI	CTNAG	4 cut(s)	896, 1419, 1548, 1665
DpnI	GATC	3 cut(s)	159, 1356, 1383
DpnII	GATC	3 cut(s)	157, 1354, 1381
DraI	TTTAAA	1 cut(s)	153
DriI	GACNNNNNGTC	1 cut(s)	910
EaeI	YGGCCR	2 cut(s)	707, 1232
EagI	CGGCCG	1 cut(s)	707
Eam1104I	CTCTTC	1 cut(s)	289
Eam1105I	GACNNNNNGTC	1 cut(s)	910
EarI	CTCTTC	1 cut(s)	289
EciI	GGCGGA	1 cut(s)	217
EclXI	CGGCCG	1 cut(s)	707
Eco130I	CCWWGG	1 cut(s)	189
Eco24I	GRGCYC	3 cut(s)	74, 455, 1461
Eco31I	GGTCTC	2 cut(s)	126, 286
Eco32I	GATATC	1 cut(s)	1224
Eco52I	CGGCCG	1 cut(s)	707
Eco57I	CTGAAG	4 cut(s)	270, 594, 1457, 1620
Eco72I	CACGTG	1 cut(s)	206
Eco88I	CYCGRG	1 cut(s)	454
EcoNI	CCTNNNNNAGG	1 cut(s)	152
EcoO109I	RGGNCCY	2 cut(s)	71, 950
EcoRII	CCWGG	3 cut(s)	1038, 1255, 1647
EcoRV	GATATC	1 cut(s)	1224
EcoT14I	CCWWGG	1 cut(s)	189
EcoT38I	GRGCYC	3 cut(s)	74, 455, 1461
ErhI	CCWWGG	1 cut(s)	189
FalI	AAGNNNNNCTT	2 cut(s)	834, 866
FaqI	GGGAC	2 cut(s)	222, 1317
FauI	CCCGC	1 cut(s)	496
Fnu4HI	GCNGC	8 cut(s)	707, 777, 890, 893, 1089, 1092, 1095, 1446
FokI	GGATG	6 cut(s)	68, 91, 389, 505, 1119, 1628
FriOI	GRGCYC	3 cut(s)	74, 455, 1461
Fsp4HI	GCNGC	8 cut(s)	707, 777, 890, 893, 1089, 1092, 1095, 1446
FspBI	CTAG	3 cut(s)	567, 980, 1672
GluI	GCNGC	8 cut(s)	707, 777, 890, 893, 1089, 1092, 1095, 1446
GsaI	CCCAGC	1 cut(s)	407
GsuI	CTGGAG	1 cut(s)	77
HaeIII	GGCC	5 cut(s)	72, 709, 952, 1044, 1234
HapII	CCGG	3 cut(s)	455, 618, 710
HgaI	GACGC	1 cut(s)	1061
HincII	GTYRAC	1 cut(s)	1425
HindII	GTYRAC	1 cut(s)	1425
HindIII	AAGCTT	1 cut(s)	165
HinfI	GANTC	5 cut(s)	30, 934, 1184, 1415, 1663
HpaII	CCGG	3 cut(s)	455, 618, 710
HphI	GGTGA	6 cut(s)	34, 93, 105, 434, 1172, 1229
Hpy166II	GTNNAC	2 cut(s)	1425, 1483
Hpy188I	TCNGA	3 cut(s)	899, 1386, 1420
Hpy8I	GTNNAC	2 cut(s)	1425, 1483
HpyAV	CCTTC	3 cut(s)	552, 661, 734
HpyCH4III	ACNGT	4 cut(s)	607, 1057, 1213, 1276
HpyCH4IV	ACGT	5 cut(s)	39, 205, 515, 1285, 1306
HpyF10VI	GCNNNNNNNGC	6 cut(s)	467, 782, 889, 1094, 1100, 1649
HpyF3I	CTNAG	4 cut(s)	896, 1419, 1548, 1665
HpySE526I	ACGT	5 cut(s)	39, 205, 515, 1285, 1306
KpnI	GGTACC	1 cut(s)	1496
Kzo9I	GATC	3 cut(s)	157, 1354, 1381
LmnI	GCTCC	3 cut(s)	10, 880, 1511
Lsp1109I	GCAGC	7 cut(s)	763, 901, 904, 1075, 1078, 1081, 1457
LweI	GCATC	7 cut(s)	38, 604, 835, 1141, 1384, 1513, 1640
MaeI	CTAG	3 cut(s)	567, 980, 1672
MaeII	ACGT	5 cut(s)	39, 205, 515, 1285, 1306
MaeIII	GTNAC	7 cut(s)	40, 99, 832, 871, 1172, 1264, 1589
MalI	GATC	3 cut(s)	159, 1356, 1383
MboI	GATC	3 cut(s)	157, 1354, 1381
MboII	GAAGA	4 cut(s)	276, 341, 749, 1613
MfeI	CAATTG	2 cut(s)	1290, 1377
MhlI	GDGCHC	4 cut(s)	74, 455, 885, 1461
MlsI	TGGCCA	1 cut(s)	1234
MluCI	AATT	8 cut(s)	366, 585, 645, 789, 837, 1290, 1325, 1377
MluNI	TGGCCA	1 cut(s)	1234
MlyI	GAGTC	1 cut(s)	1657
MmeI	TCCRAC	1 cut(s)	301
Mox20I	TGGCCA	1 cut(s)	1234
MroXI	GAANNNNTTC	1 cut(s)	223
MscI	TGGCCA	1 cut(s)	1234
MseI	TTAA	6 cut(s)	152, 584, 852, 990, 1502, 1544
Msp20I	TGGCCA	1 cut(s)	1234
MspA1I	CMGCKG	2 cut(s)	403, 1572
MspCI	CTTAAG	1 cut(s)	851
MspI	CCGG	3 cut(s)	455, 618, 710
MspR9I	CCNGG	6 cut(s)	455, 456, 619, 1040, 1257, 1649
MunI	CAATTG	2 cut(s)	1290, 1377
Mva1269I	GAATGC	4 cut(s)	505, 568, 1169, 1652
MvaI	CCWGG	3 cut(s)	1040, 1257, 1649
MvnI	CGCG	1 cut(s)	486
MwoI	GCNNNNNNNGC	6 cut(s)	467, 782, 889, 1094, 1100, 1649
NciI	CCSGG	3 cut(s)	455, 456, 619
NcoI	CCATGG	1 cut(s)	189
NdeII	GATC	3 cut(s)	157, 1354, 1381
NlaIV	GGNNCC	5 cut(s)	6, 72, 592, 1036, 1494
NmuCI	GTSAC	4 cut(s)	40, 99, 832, 1589
NspI	RCATGY	1 cut(s)	1610
PagI	TCATGA	2 cut(s)	447, 1075
PasI	CCCWGGG	1 cut(s)	1039
PciI	ACATGT	1 cut(s)	1606
PctI	GAATGC	4 cut(s)	505, 568, 1169, 1652
PdmI	GAANNNNTTC	1 cut(s)	223
PfeI	GAWTC	4 cut(s)	30, 934, 1184, 1415
PfoI	TCCNGGA	1 cut(s)	1255
PkrI	GCNGC	8 cut(s)	708, 778, 891, 894, 1090, 1093, 1096, 1447
PleI	GAGTC	1 cut(s)	1657
PmaCI	CACGTG	1 cut(s)	206
PmlI	CACGTG	1 cut(s)	206
PpsI	GAGTC	1 cut(s)	1657
Ppu21I	YACGTR	2 cut(s)	206, 1286
PscI	ACATGT	1 cut(s)	1606
PshBI	ATTAAT	1 cut(s)	1502
Psp6I	CCWGG	3 cut(s)	1038, 1255, 1647
PspCI	CACGTG	1 cut(s)	206
PspFI	CCCAGC	1 cut(s)	403
PspGI	CCWGG	3 cut(s)	1038, 1255, 1647
PspN4I	GGNNCC	5 cut(s)	6, 72, 592, 1036, 1494
PspOMI	GGGCCC	1 cut(s)	70
PspPI	GGNCC	4 cut(s)	70, 71, 950, 1042
PstI	CTGCAG	1 cut(s)	1447
PstNI	CAGNNNCTG	1 cut(s)	1478
PvuII	CAGCTG	1 cut(s)	403
RsaI	GTAC	3 cut(s)	957, 1210, 1494
RsaNI	GTAC	3 cut(s)	956, 1209, 1493
SaqAI	TTAA	6 cut(s)	152, 584, 852, 990, 1502, 1544
SatI	GCNGC	8 cut(s)	707, 777, 890, 893, 1089, 1092, 1095, 1446
Sau3AI	GATC	3 cut(s)	157, 1354, 1381
Sau96I	GGNCC	4 cut(s)	70, 71, 950, 1042
SchI	GAGTC	1 cut(s)	1657
ScrFI	CCNGG	6 cut(s)	455, 456, 619, 1040, 1257, 1649
SduI	GDGCHC	4 cut(s)	74, 455, 885, 1461
SfaNI	GCATC	7 cut(s)	38, 604, 835, 1141, 1384, 1513, 1640
SfcI	CTRYAG	2 cut(s)	1314, 1443
SmaI	CCCGGG	1 cut(s)	456
SmlI	CTYRAG	4 cut(s)	434, 851, 1137, 1460
SmoI	CTYRAG	4 cut(s)	434, 851, 1137, 1460
Sse9I	AATT	8 cut(s)	366, 585, 645, 789, 837, 1290, 1325, 1377
SsiI	CCGC	6 cut(s)	228, 484, 503, 706, 1097, 1570
SspMI	CTAG	3 cut(s)	567, 980, 1672
StyD4I	CCNGG	6 cut(s)	453, 454, 617, 1038, 1255, 1647
StyI	CCWWGG	1 cut(s)	189
TaaI	ACNGT	4 cut(s)	607, 1057, 1213, 1276
TaiI	ACGT	5 cut(s)	42, 208, 518, 1288, 1309
TaqI	TCGA	4 cut(s)	547, 1226, 1430, 1576
TasI	AATT	8 cut(s)	366, 585, 645, 789, 837, 1290, 1325, 1377
TatI	WGTACW	2 cut(s)	955, 1208
TauI	GCSGC	1 cut(s)	709
TfiI	GAWTC	4 cut(s)	30, 934, 1184, 1415
Tru1I	TTAA	6 cut(s)	152, 584, 852, 990, 1502, 1544
Tru9I	TTAA	6 cut(s)	152, 584, 852, 990, 1502, 1544
TscAI	CASTG	2 cut(s)	72, 813
TseFI	GTSAC	4 cut(s)	40, 99, 832, 1589
TseI	GCWGC	7 cut(s)	776, 889, 892, 1088, 1091, 1094, 1445
Tsp45I	GTSAC	4 cut(s)	40, 99, 832, 1589
TspDTI	ATGAA	8 cut(s)	386, 393, 436, 750, 754, 1338, 1359, 1645
TspGWI	ACGGA	2 cut(s)	235, 853
TspMI	CCCGGG	1 cut(s)	454
TspRI	CASTG	2 cut(s)	72, 813
Vha464I	CTTAAG	1 cut(s)	851
VspI	ATTAAT	1 cut(s)	1502
XagI	CCTNNNNNAGG	1 cut(s)	152
XapI	RAATTY	2 cut(s)	366, 789
XceI	RCATGY	1 cut(s)	1610
XcmI	CCANNNNNNNNNTGG	3 cut(s)	247, 915, 1046
XmaI	CCCGGG	1 cut(s)	454
XmnI	GAANNNNTTC	1 cut(s)	223
XspI	CTAG	3 cut(s)	567, 980, 1672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.