Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000685

Physical Location & Seq

Genomic Coordinates Reverse (-)

79477830 .. 79482360

Gene Structure 4531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00057510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGGCATCCTATTTGAGGGAGCTACTCTTTTGTGTCGTTCGGCTCGCGTTGGAGGCGGAGGCGGCGGCGGCCGGTGGCTATCGATGTGGCCAAGCTGTCTATGATCGGGAATTCTATTACCTCAAACCCGCGCTTCGCTTGGTTTTGGATTCCTCGAAAGCGAACTCGCACCGATTTGGTTGCCTCGCTAGTTGTGCGAAGAAGTGCCCGCAGGTCCGGATTGACCGACCGCCTTCTTCCTTGTGCATGTCCTATCTCGCGACGGCCTCCCTTGCCCACCTTCTCGTAGCAGCCATGGCAGTTGTTACACGTGTCTCCCACAGAACCCATTCCGTCCTTAGTCCCACCTCCGTTTTGGCTCTGGCTTGCCATTTCTTGCTTCTGGTCTCTTCAGCCATCACTCCCTGTTTCGGGTTTTCTGGTGTTGGAGGAGAAGATGAGGGAAACAAAGGAGGAGATTTGTATCCTGAAATTTTGAGGGATGAAGCTGTGGCAAGACTTCATCAGCTTGGAAAGGTAAGTGATGGTGATGGCTATCTTGAGAGGATATTCATGAGCCCGGGGGCTGTGAGGGCAGGAAATCTAATCCGCGAATGGATGGAGGATGCTGGTTTGCGAACGTGGGTTGATTGCTTGGGAAATATACATGGTCGAGTTGAGGGAAGGAATGCTAGTGCTGAAGCTCTGTTAATTGGTTCCCATTTGGATACTGTTGTTGATGCCGGGATATTTGATGGGTCTTTAGGCATCATTTCTGTGTTATCAGCATTGAAGGTTTTGAGTATCAATGGCAAGTTGGGAGAACTAAAGCGGCCGGTTGAGGTAATAGCGTTTAGTGATGAAGAAGGAGTAAGGTTTCAATCTACATACATAGGAAGTGCTGCCATAGCTGGAATTTTACCAGTTTCAGCACTGCAAATAACTGATAAAAGTGGTGTGACTATTCAAGATGCTCTTAAGAAAAACTCCATAGAAGTTACAGAGGAGCACTTGCAGCAGCTCAGATATGACCCAAAGTCAGTTTGGGGTTATGTTGAGATTCACATTGAACAAGGGCCTGTACTGGAGTGGGTTGGTTTTCCTCTAGGAGTTGTTAAAGGCATAGCTGGACAGACAAGACTAAAGGTTACGATGAGAGGTTCCCAGGGGCATGCCGGAACAGTTCCAATGTCCATGCGTCATGACCCTATGGCTGCTGCTGCAGAAGCCATTGTGTTATTAGAAAGCCTATGTAAGCATCCTCAAGATTTTCTGTCTTTTGATGGTCAATGCAAAAGTTACTCATTAGAATCACTTTCAACTTCACTCGTTTGTACTGTTGGTGAGATATCGACTTGGCCAAGTGCAAGTAATGTAACATTCACAGTAGATTTACGTGCAATCGATGACATGGGTCGTGAAGCTGTTATATATGAATTTTCCAACCGATTGTATCAATTATGTGATAGGCGTTCAGTTTCGTGTACAATTGATCGTAAGCATGATGCAAATGCAGTCATTTGCGATTCTGAGCTGACTTCGAAGCTGAAGTCTGCTGCTTATCTTGGGCTCAAGAGAATGACAGGTTATGTTCAGGATGAAGTACCTGTACTAATGAGTGGAGCAGGACATGATGCAATGGCTCTGTCTCATGTAGCTAAGGTGGGTATGCTTTTTGTCCGCTGTCGAGGAGGCATAAGTCACTCCCCTGAAGAACATGTATTGGATGATGATGTTTGGGCATCTGCTTTGGCAATCCTGGCATTCATAGAGACTCAGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000255 GO:0000256 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009987 GO:0010135 GO:0010136 GO:0012505 GO:0016787 GO:0016810 GO:0016813 GO:0017144 GO:0019439 GO:0034641 GO:0042737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043605 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046113 GO:0046483 GO:0046700 GO:0047652 GO:0055086 GO:0071704 GO:0072521 GO:0072523 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko01120 map00230 map01120

Pfam Domains

Protein Families

M20_dimer Peptidase_M20 Peptidase_M28

Protein Analysis

587

Amino Acids

63.43

Weight (kDa)

5.93

Isoelectric Point (pI)

38.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M28	PF04389	214 - 293	6.9e-08	Peptidase family M28
Peptidase_M20	PF01546	230 - 584	5.7e-15	Peptidase family M20/M25/M40

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000685)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20070 AT4G20070
fragaria_vesca	FvH4_3g12850 FvH4_3g12850 FvH4_3g12850
malus_domestica	MD10G1228200.v1.1
prunus_persica	Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1
pyrus_communis	pycom10g19170
rosa_chinensis	RchiOBHm_Chr1g0315031 RchiOBHm_Chr1g0315061 RchiOBHm_Chr1g0315091 RchiOBHm_Chr1g0315141 RchiOBHm_Chr1g0315151 RchiOBHm_Chr1g0315201 RchiOBHm_Chr1g0315231 RchiOBHm_Chr1g0315241 RchiOBHm_Chr1g0315311 RchiOBHm_Chr1g0315381 RchiOBHm_Chr1g0315441 RchiOBHm_Chr1g0315471 RchiOBHm_Chr1g0315531 RchiOBHm_Chr1g0315541 RchiOBHm_Chr1g0315581 RchiOBHm_Chr1g0315591 RchiOBHm_Chr1g0315611 RchiOBHm_Chr5g0020791 RchiOBHm_Chr5g0020891 RchiOBHm_Chr5g0021441 RchiOBHm_Chr5g0021511 RchiOBHm_Chr5g0021521 RchiOBHm_Chr5g0029451 RchiOBHm_Chr5g0029471
rosa_laevigata	RLG00000030744 RLG00000030748 RLG00000032563 RLG00000032611
rosa_multiflora	Rmu_sc0000576.1_g000021 Rmu_sc0002052.1_g000003 Rmu_sc0004180.1_g000017 Rmu_sc0004180.1_g000030 Rmu_sc0004180.1_g000035 Rmu_sc0023070.1_g000002 Rmu_ssc0000244.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057130 Rroxscaffold_1G00057510 Rroxscaffold_4G00331580
rosa_rugosa	Rorug01G0004300 Rorug05G0063000 Rorug05G0067300
rosa_samantha	Rh1AG015000 Rh1AG015600 Rh1BG007400 Rh1BG007800 Rh1CG013200 Rh5AG152900 Rh5BG152700 Rh5BG155800 Rh5CG164200 Rh5CG164700 Rh5CG170000 Rh5CG227100
rosa_wichuraiana	Rw1G000740 Rw1G000780 Rw1G000810 Rw1G000840 Rw1G000870 Rw1G000900 Rw5G013560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	202
AccII	CGCG	4 cut(s)	47, 131, 260, 591
AccIII	TCCGGA	1 cut(s)	216
AcoI	YGGCCR	4 cut(s)	69, 88, 812, 1337
AcsI	RAATTY	4 cut(s)	110, 471, 894, 1415
AcuI	CTGAAG	4 cut(s)	375, 699, 1547, 1710
AcvI	CACGTG	1 cut(s)	311
AfaI	GTAC	5 cut(s)	1062, 1315, 1465, 1584, 1590
AfiI	CCNNNNNNNGG	3 cut(s)	15, 410, 411
AflII	CTTAAG	1 cut(s)	956
AflIII	ACRYGT	3 cut(s)	308, 310, 1696
AgsI	TTSAA	5 cut(s)	772, 860, 947, 1049, 1299
AhdI	GACNNNNNGTC	1 cut(s)	1015
AjnI	CCWGG	2 cut(s)	1143, 1737
Alw21I	GWGCWC	1 cut(s)	990
Alw26I	GTCTC	4 cut(s)	319, 391, 1632, 1745
Ama87I	CYCGRG	1 cut(s)	559
Aor13HI	TCCGGA	1 cut(s)	216
AoxI	GGCC	6 cut(s)	69, 88, 264, 812, 1055, 1337
ApeKI	GCWGC	8 cut(s)	290, 881, 994, 997, 1193, 1196, 1199, 1535
ApoI	RAATTY	4 cut(s)	110, 471, 894, 1415
ArsI	GACNNNNNNTTYG	2 cut(s)	1514, 1546
Asp700I	GAANNNNTTC	1 cut(s)	328
AspLEI	GCGC	1 cut(s)	133
AspS9I	GGNCC	2 cut(s)	214, 1055
AsuC2I	CCSGG	3 cut(s)	560, 561, 724
AsuHPI	GGTGA	2 cut(s)	539, 1334
AsuII	TTCGAA	1 cut(s)	1520
AvaI	CYCGRG	1 cut(s)	559
AvaII	GGWCC	1 cut(s)	214
BaeGI	GKGCMC	1 cut(s)	209
BaeI	ACNNNNGTAYC	2 cut(s)	699, 732
BalI	TGGCCA	2 cut(s)	90, 1339
BanII	GRGCYC	2 cut(s)	560, 1551
BarI	GAAGNNNNNNTAC	2 cut(s)	1572, 1604
BbrPI	CACGTG	1 cut(s)	311
Bbv12I	GWGCWC	1 cut(s)	990
BbvI	GCAGC	8 cut(s)	302, 868, 1006, 1009, 1180, 1183, 1186, 1522
BccI	CCATC	6 cut(s)	404, 518, 524, 592, 728, 1256
BceAI	ACGGC	1 cut(s)	279
BcgI	CGANNNNNNTGC	2 cut(s)	162, 196
BciT130I	CCWGG	2 cut(s)	1145, 1739
BciVI	GTATCC	2 cut(s)	474, 700
BcnI	CCSGG	3 cut(s)	560, 561, 724
BcoDI	GTCTC	4 cut(s)	319, 391, 1632, 1745
BfaI	CTAG	4 cut(s)	189, 672, 1085, 1762
BfmI	CTRYAG	1 cut(s)	1200
BfrI	CTTAAG	1 cut(s)	956
BfuAI	ACCTGC	1 cut(s)	202
BfuI	GTATCC	2 cut(s)	474, 700
Bme1390I	CCNGG	5 cut(s)	560, 561, 724, 1145, 1739
Bme18I	GGWCC	1 cut(s)	214
BmeRI	GACNNNNNGTC	1 cut(s)	1015
BmeT110I	CYCGRG	1 cut(s)	559
BmgT120I	GGNCC	2 cut(s)	214, 1055
BmiI	GGNNCC	2 cut(s)	697, 1141
BmrFI	CCNGG	5 cut(s)	560, 561, 724, 1145, 1739
BmsI	GCATC	9 cut(s)	14, 595, 709, 756, 940, 1246, 1474, 1603, 1730
BoxI	GACNNNNGTC	1 cut(s)	1392
BpmI	CTGGAG	1 cut(s)	1085
Bpu10I	CCTNAGC	1 cut(s)	1638
Bpu14I	TTCGAA	1 cut(s)	1520
BpuEI	CTTGAG	3 cut(s)	560, 1227, 1535
BpuMI	CCSGG	3 cut(s)	560, 561, 724
Bsa29I	ATCGAT	2 cut(s)	82, 1383
BsaAI	YACGTR	2 cut(s)	311, 1376
BsaBI	GATNNNNATC	2 cut(s)	462, 534
BsaI	GGTCTC	1 cut(s)	391
BsaJI	CCNNGG	5 cut(s)	294, 559, 560, 1143, 1144
BsaWI	WCCGGW	1 cut(s)	216
Bsc4I	CCNNNNNNNGG	3 cut(s)	15, 410, 411
Bse118I	RCCGGY	2 cut(s)	71, 814
Bse1I	ACTGG	2 cut(s)	902, 1068
Bse3DI	GCAATG	1 cut(s)	1623
Bse8I	GATNNNNATC	2 cut(s)	462, 534
BseAI	TCCGGA	1 cut(s)	216
BseBI	CCWGG	2 cut(s)	1145, 1739
BseCI	ATCGAT	2 cut(s)	82, 1383
BseDI	CCNNGG	5 cut(s)	294, 559, 560, 1143, 1144
BseGI	GGATG	7 cut(s)	5, 487, 603, 610, 1237, 1582, 1711
BseJI	GATNNNNATC	2 cut(s)	462, 534
BseLI	CCNNNNNNNGG	3 cut(s)	15, 410, 411
BseMI	GCAATG	1 cut(s)	1623
BseMII	CTCAG	2 cut(s)	1015, 1500
BseNI	ACTGG	2 cut(s)	902, 1068
BseRI	GAGGAG	4 cut(s)	444, 468, 998, 1683
BseSI	GKGCMC	1 cut(s)	209
BseX3I	CGGCCG	2 cut(s)	69, 812
BseXI	GCAGC	8 cut(s)	302, 868, 1006, 1009, 1180, 1183, 1186, 1522
Bsh1236I	CGCG	4 cut(s)	47, 131, 260, 591
Bsh1285I	CGRYCG	3 cut(s)	72, 230, 815
BshFI	GGCC	6 cut(s)	71, 90, 266, 814, 1057, 1339
BshVI	ATCGAT	2 cut(s)	82, 1383
BsiEI	CGRYCG	3 cut(s)	72, 230, 815
BsiHKAI	GWGCWC	1 cut(s)	990
BsiHKCI	CYCGRG	1 cut(s)	559
BsiSI	CCGG	6 cut(s)	72, 217, 560, 723, 815, 1155
BslFI	GGGAC	1 cut(s)	327
BslI	CCNNNNNNNGG	3 cut(s)	15, 410, 411
BsmAI	GTCTC	4 cut(s)	319, 391, 1632, 1745
BsmFI	GGGAC	1 cut(s)	327
BsmI	GAATGC	2 cut(s)	673, 1742
BsnI	GGCC	6 cut(s)	71, 90, 266, 814, 1057, 1339
Bso31I	GGTCTC	1 cut(s)	391
BsoBI	CYCGRG	1 cut(s)	559
Bsp119I	TTCGAA	1 cut(s)	1520
Bsp1286I	GDGCHC	4 cut(s)	209, 560, 990, 1551
Bsp13I	TCCGGA	1 cut(s)	216
Bsp1407I	TGTACA	1 cut(s)	1463
Bsp143I	GATC	2 cut(s)	103, 1471
Bsp19I	CCATGG	1 cut(s)	294
Bsp68I	TCGCGA	1 cut(s)	260
BspANI	GGCC	6 cut(s)	71, 90, 266, 814, 1057, 1339
BspCNI	CTCAG	2 cut(s)	1014, 1501
BspDI	ATCGAT	2 cut(s)	82, 1383
BspEI	TCCGGA	1 cut(s)	216
BspFNI	CGCG	4 cut(s)	47, 131, 260, 591
BspHI	TCATGA	2 cut(s)	552, 1180
BspLI	GGNNCC	2 cut(s)	697, 1141
BspMAI	CTGCAG	1 cut(s)	1204
BspMI	ACCTGC	1 cut(s)	202
BspT104I	TTCGAA	1 cut(s)	1520
BspTI	CTTAAG	1 cut(s)	956
BspTNI	GGTCTC	1 cut(s)	391
BsrDI	GCAATG	1 cut(s)	1623
BsrFI	RCCGGY	2 cut(s)	71, 814
BsrGI	TGTACA	1 cut(s)	1463
BsrI	ACTGG	2 cut(s)	902, 1068
BssAI	RCCGGY	2 cut(s)	71, 814
BssECI	CCNNGG	5 cut(s)	294, 559, 560, 1143, 1144
BssMI	GATC	2 cut(s)	103, 1471
BssT1I	CCWWGG	1 cut(s)	294
Bst2UI	CCWGG	2 cut(s)	1145, 1739
Bst4CI	ACNGT	4 cut(s)	712, 1162, 1318, 1366
Bst6I	CTCTTC	1 cut(s)	394
BstAFI	CTTAAG	1 cut(s)	956
BstAUI	TGTACA	1 cut(s)	1463
BstBAI	YACGTR	2 cut(s)	311, 1376
BstBI	TTCGAA	1 cut(s)	1520
BstC8I	GCNNGC	4 cut(s)	45, 209, 367, 1152
BstDEI	CTNAG	5 cut(s)	338, 1001, 1509, 1638, 1755
BstDSI	CCRYGG	1 cut(s)	294
BstENI	CCTNNNNNAGG	1 cut(s)	13
BstF5I	GGATG	7 cut(s)	5, 487, 603, 610, 1237, 1582, 1711
BstFNI	CGCG	4 cut(s)	47, 131, 260, 591
BstHHI	GCGC	1 cut(s)	133
BstKTI	GATC	2 cut(s)	106, 1474
BstMAI	GTCTC	4 cut(s)	319, 391, 1632, 1745
BstMBI	GATC	2 cut(s)	103, 1471
BstMCI	CGRYCG	3 cut(s)	72, 230, 815
BstNI	CCWGG	2 cut(s)	1145, 1739
BstNSI	RCATGY	3 cut(s)	250, 1154, 1700
BstPAI	GACNNNNGTC	1 cut(s)	1392
BstSCI	CCNGG	5 cut(s)	558, 559, 722, 1143, 1737
BstSFI	CTRYAG	1 cut(s)	1200
BstSLI	GKGCMC	1 cut(s)	209
BstUI	CGCG	4 cut(s)	47, 131, 260, 591
BstV1I	GCAGC	8 cut(s)	302, 868, 1006, 1009, 1180, 1183, 1186, 1522
BstZI	CGGCCG	2 cut(s)	69, 812
Bsu15I	ATCGAT	2 cut(s)	82, 1383
BsuI	GTATCC	2 cut(s)	474, 700
BsuRI	GGCC	6 cut(s)	71, 90, 266, 814, 1057, 1339
BsuTUI	ATCGAT	2 cut(s)	82, 1383
BtgI	CCRYGG	1 cut(s)	294
BtsCI	GGATG	7 cut(s)	5, 487, 603, 610, 1237, 1582, 1711
BtsI	GCAGTG	1 cut(s)	911
BtsIMutI	CAGTG	1 cut(s)	911
BtuMI	TCGCGA	1 cut(s)	260
BveI	ACCTGC	1 cut(s)	202
Cac8I	GCNNGC	4 cut(s)	45, 209, 367, 1152
CciI	TCATGA	2 cut(s)	552, 1180
CfoI	GCGC	1 cut(s)	133
Cfr10I	RCCGGY	2 cut(s)	71, 814
Cfr13I	GGNCC	2 cut(s)	214, 1055
Cfr9I	CCCGGG	1 cut(s)	559
ClaI	ATCGAT	2 cut(s)	82, 1383
CseI	GACGC	1 cut(s)	1166
Csp6I	GTAC	5 cut(s)	1061, 1314, 1464, 1583, 1589
CviQI	GTAC	5 cut(s)	1061, 1314, 1464, 1583, 1589
DdeI	CTNAG	5 cut(s)	338, 1001, 1509, 1638, 1755
DpnI	GATC	2 cut(s)	105, 1473
DpnII	GATC	2 cut(s)	103, 1471
DriI	GACNNNNNGTC	1 cut(s)	1015
EaeI	YGGCCR	4 cut(s)	69, 88, 812, 1337
EagI	CGGCCG	2 cut(s)	69, 812
Eam1104I	CTCTTC	1 cut(s)	394
Eam1105I	GACNNNNNGTC	1 cut(s)	1015
EarI	CTCTTC	1 cut(s)	394
EciI	GGCGGA	1 cut(s)	71
EclXI	CGGCCG	2 cut(s)	69, 812
Eco130I	CCWWGG	1 cut(s)	294
Eco24I	GRGCYC	2 cut(s)	560, 1551
Eco31I	GGTCTC	1 cut(s)	391
Eco32I	GATATC	1 cut(s)	1329
Eco47I	GGWCC	1 cut(s)	214
Eco52I	CGGCCG	2 cut(s)	69, 812
Eco57I	CTGAAG	4 cut(s)	375, 699, 1547, 1710
Eco72I	CACGTG	1 cut(s)	311
Eco88I	CYCGRG	1 cut(s)	559
EcoNI	CCTNNNNNAGG	1 cut(s)	13
EcoO109I	RGGNCCY	1 cut(s)	1055
EcoRI	GAATTC	1 cut(s)	110
EcoRII	CCWGG	2 cut(s)	1143, 1737
EcoRV	GATATC	1 cut(s)	1329
EcoT14I	CCWWGG	1 cut(s)	294
EcoT38I	GRGCYC	2 cut(s)	560, 1551
ErhI	CCWWGG	1 cut(s)	294
FalI	AAGNNNNNCTT	2 cut(s)	939, 971
FaqI	GGGAC	1 cut(s)	327
FauI	CCCGC	2 cut(s)	136, 216
FokI	GGATG	6 cut(s)	494, 610, 617, 1224, 1589, 1718
FriOI	GRGCYC	2 cut(s)	560, 1551
FspBI	CTAG	4 cut(s)	189, 672, 1085, 1762
GlaI	GCGC	1 cut(s)	132
GsuI	CTGGAG	1 cut(s)	1085
HaeIII	GGCC	6 cut(s)	71, 90, 266, 814, 1057, 1339
HapII	CCGG	6 cut(s)	72, 217, 560, 723, 815, 1155
HgaI	GACGC	1 cut(s)	1166
HhaI	GCGC	1 cut(s)	133
Hin6I	GCGC	1 cut(s)	131
HinP1I	GCGC	1 cut(s)	131
HinfI	GANTC	5 cut(s)	149, 1039, 1289, 1505, 1753
HpaII	CCGG	6 cut(s)	72, 217, 560, 723, 815, 1155
HphI	GGTGA	2 cut(s)	539, 1334
Hpy166II	GTNNAC	1 cut(s)	1464
Hpy188I	TCNGA	2 cut(s)	1004, 1510
Hpy8I	GTNNAC	1 cut(s)	1464
Hpy99I	CGWCG	1 cut(s)	265
HpyAV	CCTTC	5 cut(s)	243, 290, 657, 766, 839
HpyCH4III	ACNGT	4 cut(s)	712, 1162, 1318, 1366
HpyCH4IV	ACGT	3 cut(s)	310, 620, 1375
HpyF3I	CTNAG	5 cut(s)	338, 1001, 1509, 1638, 1755
HpySE526I	ACGT	3 cut(s)	310, 620, 1375
HspAI	GCGC	1 cut(s)	131
Kpn2I	TCCGGA	1 cut(s)	216
Kzo9I	GATC	2 cut(s)	103, 1471
LmnI	GCTCC	3 cut(s)	19, 985, 1601
Lsp1109I	GCAGC	8 cut(s)	302, 868, 1006, 1009, 1180, 1183, 1186, 1522
LweI	GCATC	9 cut(s)	14, 595, 709, 756, 940, 1246, 1474, 1603, 1730
MaeI	CTAG	4 cut(s)	189, 672, 1085, 1762
MaeII	ACGT	3 cut(s)	310, 620, 1375
MaeIII	GTNAC	7 cut(s)	304, 937, 976, 1126, 1277, 1354, 1679
MalI	GATC	2 cut(s)	105, 1473
MboI	GATC	2 cut(s)	103, 1471
MboII	GAAGA	6 cut(s)	211, 228, 381, 446, 854, 1703
MfeI	CAATTG	1 cut(s)	1467
MhlI	GDGCHC	4 cut(s)	209, 560, 990, 1551
MlsI	TGGCCA	2 cut(s)	90, 1339
MluCI	AATT	7 cut(s)	110, 471, 690, 894, 1415, 1436, 1467
MluNI	TGGCCA	2 cut(s)	90, 1339
MlyI	GAGTC	1 cut(s)	1747
MmeI	TCCRAC	3 cut(s)	30, 406, 1446
Mox20I	TGGCCA	2 cut(s)	90, 1339
MroI	TCCGGA	1 cut(s)	216
MroXI	GAANNNNTTC	1 cut(s)	328
MscI	TGGCCA	2 cut(s)	90, 1339
MseI	TTAA	3 cut(s)	689, 957, 1095
MslI	CAYNNNNRTG	1 cut(s)	755
Msp20I	TGGCCA	2 cut(s)	90, 1339
MspA1I	CMGCKG	1 cut(s)	1662
MspCI	CTTAAG	1 cut(s)	956
MspI	CCGG	6 cut(s)	72, 217, 560, 723, 815, 1155
MspR9I	CCNGG	5 cut(s)	560, 561, 724, 1145, 1739
MunI	CAATTG	1 cut(s)	1467
Mva1269I	GAATGC	2 cut(s)	673, 1742
MvaI	CCWGG	2 cut(s)	1145, 1739
MvnI	CGCG	4 cut(s)	47, 131, 260, 591
NciI	CCSGG	3 cut(s)	560, 561, 724
NcoI	CCATGG	1 cut(s)	294
NdeII	GATC	2 cut(s)	103, 1471
NlaIV	GGNNCC	2 cut(s)	697, 1141
NmuCI	GTSAC	2 cut(s)	937, 1679
NruI	TCGCGA	1 cut(s)	260
NspI	RCATGY	3 cut(s)	250, 1154, 1700
NspV	TTCGAA	1 cut(s)	1520
PaeI	GCATGC	1 cut(s)	1154
PagI	TCATGA	2 cut(s)	552, 1180
PasI	CCCWGGG	1 cut(s)	1144
PciI	ACATGT	1 cut(s)	1696
PctI	GAATGC	2 cut(s)	673, 1742
PdmI	GAANNNNTTC	1 cut(s)	328
PfeI	GAWTC	4 cut(s)	149, 1039, 1289, 1505
PleI	GAGTC	1 cut(s)	1747
PmaCI	CACGTG	1 cut(s)	311
PmlI	CACGTG	1 cut(s)	311
PpsI	GAGTC	1 cut(s)	1747
Ppu21I	YACGTR	2 cut(s)	311, 1376
PscI	ACATGT	1 cut(s)	1696
PshAI	GACNNNNGTC	1 cut(s)	1392
Psp6I	CCWGG	2 cut(s)	1143, 1737
PspCI	CACGTG	1 cut(s)	311
PspGI	CCWGG	2 cut(s)	1143, 1737
PspN4I	GGNNCC	2 cut(s)	697, 1141
PspPI	GGNCC	2 cut(s)	214, 1055
PstI	CTGCAG	1 cut(s)	1204
RruI	TCGCGA	1 cut(s)	260
RsaI	GTAC	5 cut(s)	1062, 1315, 1465, 1584, 1590
RsaNI	GTAC	5 cut(s)	1061, 1314, 1464, 1583, 1589
RseI	CAYNNNNRTG	1 cut(s)	755
SaqAI	TTAA	3 cut(s)	689, 957, 1095
Sau3AI	GATC	2 cut(s)	103, 1471
Sau96I	GGNCC	2 cut(s)	214, 1055
SchI	GAGTC	1 cut(s)	1747
ScrFI	CCNGG	5 cut(s)	560, 561, 724, 1145, 1739
SduI	GDGCHC	4 cut(s)	209, 560, 990, 1551
SfaNI	GCATC	9 cut(s)	14, 595, 709, 756, 940, 1246, 1474, 1603, 1730
SfcI	CTRYAG	1 cut(s)	1200
SfuI	TTCGAA	1 cut(s)	1520
SinI	GGWCC	1 cut(s)	214
SmaI	CCCGGG	1 cut(s)	561
SmiMI	CAYNNNNRTG	1 cut(s)	755
SmlI	CTYRAG	4 cut(s)	539, 956, 1242, 1550
SmoI	CTYRAG	4 cut(s)	539, 956, 1242, 1550
SphI	GCATGC	1 cut(s)	1154
Sse9I	AATT	7 cut(s)	110, 471, 690, 894, 1415, 1436, 1467
SspMI	CTAG	4 cut(s)	189, 672, 1085, 1762
StyD4I	CCNGG	5 cut(s)	558, 559, 722, 1143, 1737
StyI	CCWWGG	1 cut(s)	294
TaaI	ACNGT	4 cut(s)	712, 1162, 1318, 1366
TaiI	ACGT	3 cut(s)	313, 623, 1378
TaqI	TCGA	7 cut(s)	82, 155, 652, 1331, 1383, 1520, 1666
TaqII	GACCGA	1 cut(s)	240
TasI	AATT	7 cut(s)	110, 471, 690, 894, 1415, 1436, 1467
TatI	WGTACW	4 cut(s)	1060, 1313, 1463, 1588
TauI	GCSGC	4 cut(s)	65, 68, 71, 814
TfiI	GAWTC	4 cut(s)	149, 1039, 1289, 1505
Tru1I	TTAA	3 cut(s)	689, 957, 1095
Tru9I	TTAA	3 cut(s)	689, 957, 1095
TscAI	CASTG	1 cut(s)	918
TseFI	GTSAC	2 cut(s)	937, 1679
TseI	GCWGC	8 cut(s)	290, 881, 994, 997, 1193, 1196, 1199, 1535
Tsp45I	GTSAC	2 cut(s)	937, 1679
TspDTI	ATGAA	7 cut(s)	491, 498, 541, 855, 1428, 1593, 1735
TspGWI	ACGGA	2 cut(s)	322, 340
TspMI	CCCGGG	1 cut(s)	559
TspRI	CASTG	1 cut(s)	918
Vha464I	CTTAAG	1 cut(s)	956
VpaK11BI	GGWCC	1 cut(s)	214
XagI	CCTNNNNNAGG	1 cut(s)	13
XapI	RAATTY	4 cut(s)	110, 471, 894, 1415
XceI	RCATGY	3 cut(s)	250, 1154, 1700
XcmI	CCANNNNNNNNNTGG	2 cut(s)	352, 1020
XmaI	CCCGGG	1 cut(s)	559
XmnI	GAANNNNTTC	1 cut(s)	328
XspI	CTAG	4 cut(s)	189, 672, 1085, 1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.