Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0000685

Physical Location & Seq

Genomic Coordinates Forward (+)

16050481 .. 16053695

Gene Structure 3215 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG152900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGGCAGTTGCTACACGTGTCTCCCACAGAACCCATTCCGCCATTAGTCCCACCTCCGTTTTGGCTCTGGCTTGCCATTTCTTGCTTCTGGTCTCTTCAGCCATCACTCCCTGTTTTGGGTTTTCTGGTGTTGGAGGAGAAGATGAGGGAAACAGAGGAGGGGATTTGTATCCTGAAATTTTGAGGGATGAAGCTGTGTCAAGACTTCATCAGCTGGGAAAGGTAAGTGATGGTGATGGCTATCTTGAGAGGATATTCATGAGCCCGGGGGCTGTGAGGGCAGGAAATCTAATCCGCGAATGGATGGAGGATGCTGGTTTGCGAACGTGGGTTGATTGCTTGGGAAATATACATGGTCGAGTTGAGGGAAGGAATGCTAGTGCTGAAGCTCTGTTAATTGGTTCCCATTTGGATACTGTTGTTGATGCCGGGATATTTGATGGGTCTTTAGGCATAATTTCTGTGTTATCAGCATTGAAGGTTTTGAGTATCAATGGCAAGTTGGGAGAACTAAAGCGGCCGGTTGAGGTAATAGCGTTTAGTGATGAAGAAGGAGTAAGGTTTCAATCTACATTCATAGGAAGTGCTGCCATAGCTGGAATTTTACCAGTTTCAGCACTGCAAATAACTGATAAAAGTGGTGTGACAATTCAAGATGCTCTTAAGAAAAACTCCGTAGAAGTTACAGAGGAGCACTTGCAGCAGCTCAGATATGACCCAAAGTCAGTTTGGGGTTATGTTGAGATTCACATTGAACAAGGGCCTGTACTGGAATGGGTTGGTTTTCCTCTAGGAGTTGTTAAAGGCATAGCTGGACAGACAAGACTAAAGGTTATGATGAGAGGTTCCCAGGGCCATGCTGGAACAGTTCCAATGTCCATGCGTCATGACCCTATGGCTGCTGCTGCGGAAGCCATTGTATTATTAGAAAGCCTATGTAAGCATCCTCAAGATTTTCTGTCTTTTGATGGTCAATGCAAAAGTTACTCATTAGAATCACTTTCAACTTCCCTCGTTTGTACTGTTGGTGAGATATCGACTTGGCCAAGTGCAAGTAATGTTATTCCAGGACAGGTAACATTCACAGTAGATTTACGTGCAATTGATGACATGGGACGTGAAGCTGTAGTATATGAATTATCTAACCGATTGTATCAAATATGTGATCGGCGTTCAGTTTCATGCACAATTGATCGGAAGCATGATGCAAATGCAGTCATTTGCGATTCTGAGTTGACCTCGAAGCTGAAGTCTGCAGCTTATCTTGGGCTCAAGAGAATGACAGGTTCTGTTCACGATGAGGTACCGATGTTAATGAGTGGAGCAGGACATGATGCAATGGCTCTGTCTCATTTAACTAAGGTGGGTATGCTTTTTGTCCGCTGTCGAGGAGGCATAAGTCACTCCCCAGAAGAACATGTATTGGATGATGATGTTTGGGCATCTGGTTTGGCAATCCTGGCATTCATAGAGACTCAGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000255 GO:0000256 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009987 GO:0010135 GO:0010136 GO:0012505 GO:0016787 GO:0016810 GO:0016813 GO:0017144 GO:0019439 GO:0034641 GO:0042737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043605 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046113 GO:0046483 GO:0046700 GO:0047652 GO:0055086 GO:0071704 GO:0072521 GO:0072523 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko01120 map00230 map01120

Pfam Domains

Protein Families

M20_dimer Peptidase_M20 Peptidase_M28

Protein Analysis

494

Amino Acids

53.18

Weight (kDa)

5.51

Isoelectric Point (pI)

35.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M28	PF04389	116 - 199	4.6e-08	Peptidase family M28
Peptidase_M20	PF01546	132 - 481	1.4e-14	Peptidase family M20/M25/M40
M20_dimer	PF07687	272 - 385	1.3e-06	Peptidase dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000685)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20070 AT4G20070
fragaria_vesca	FvH4_3g12850 FvH4_3g12850 FvH4_3g12850
malus_domestica	MD10G1228200.v1.1
prunus_persica	Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1
pyrus_communis	pycom10g19170
rosa_chinensis	RchiOBHm_Chr1g0315031 RchiOBHm_Chr1g0315061 RchiOBHm_Chr1g0315091 RchiOBHm_Chr1g0315141 RchiOBHm_Chr1g0315151 RchiOBHm_Chr1g0315201 RchiOBHm_Chr1g0315231 RchiOBHm_Chr1g0315241 RchiOBHm_Chr1g0315311 RchiOBHm_Chr1g0315381 RchiOBHm_Chr1g0315441 RchiOBHm_Chr1g0315471 RchiOBHm_Chr1g0315531 RchiOBHm_Chr1g0315541 RchiOBHm_Chr1g0315581 RchiOBHm_Chr1g0315591 RchiOBHm_Chr1g0315611 RchiOBHm_Chr5g0020791 RchiOBHm_Chr5g0020891 RchiOBHm_Chr5g0021441 RchiOBHm_Chr5g0021511 RchiOBHm_Chr5g0021521 RchiOBHm_Chr5g0029451 RchiOBHm_Chr5g0029471
rosa_laevigata	RLG00000030744 RLG00000030748 RLG00000032563 RLG00000032611
rosa_multiflora	Rmu_sc0000576.1_g000021 Rmu_sc0002052.1_g000003 Rmu_sc0004180.1_g000017 Rmu_sc0004180.1_g000030 Rmu_sc0004180.1_g000035 Rmu_sc0023070.1_g000002 Rmu_ssc0000244.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057130 Rroxscaffold_1G00057510 Rroxscaffold_4G00331580
rosa_rugosa	Rorug01G0004300 Rorug05G0063000 Rorug05G0067300
rosa_samantha	Rh1AG015000 Rh1AG015600 Rh1BG007400 Rh1BG007800 Rh1CG013200 Rh5AG152900 Rh5BG152700 Rh5BG155800 Rh5CG164200 Rh5CG164700 Rh5CG170000 Rh5CG227100
rosa_wichuraiana	Rw1G000740 Rw1G000780 Rw1G000810 Rw1G000840 Rw1G000870 Rw1G000900 Rw5G013560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1303
AccB1I	GGYRCC	1 cut(s)	1303
AccII	CGCG	1 cut(s)	297
AciI	CCGC	5 cut(s)	39, 295, 517, 908, 1381
AcoI	YGGCCR	2 cut(s)	518, 1043
AcsI	RAATTY	2 cut(s)	177, 600
AcuI	CTGAAG	3 cut(s)	81, 405, 1268
AcvI	CACGTG	1 cut(s)	17
AfaI	GTAC	3 cut(s)	768, 1021, 1305
AfiI	CCNNNNNNNGG	2 cut(s)	116, 117
AflII	CTTAAG	1 cut(s)	662
AflIII	ACRYGT	3 cut(s)	14, 16, 1417
AgsI	TTSAA	5 cut(s)	478, 566, 653, 755, 1005
AhdI	GACNNNNNGTC	1 cut(s)	721
AjiI	CACGTC	1 cut(s)	1118
AjnI	CCWGG	3 cut(s)	849, 1066, 1458
Alw21I	GWGCWC	1 cut(s)	696
Alw26I	GTCTC	4 cut(s)	25, 97, 1353, 1466
AlwNI	CAGNNNCTG	1 cut(s)	1289
Ama87I	CYCGRG	1 cut(s)	265
AoxI	GGCC	4 cut(s)	518, 761, 853, 1043
ApeKI	GCWGC	7 cut(s)	587, 700, 703, 899, 902, 905, 1256
ApoI	RAATTY	2 cut(s)	177, 600
ArsI	GACNNNNNNTTYG	2 cut(s)	1235, 1267
Asp700I	GAANNNNTTC	1 cut(s)	34
Asp718I	GGTACC	1 cut(s)	1303
AspS9I	GGNCC	2 cut(s)	761, 853
AsuC2I	CCSGG	3 cut(s)	266, 267, 430
AsuHPI	GGTGA	2 cut(s)	245, 1040
AvaI	CYCGRG	1 cut(s)	265
BaeI	ACNNNNGTAYC	4 cut(s)	405, 438, 1295, 1328
BalI	TGGCCA	1 cut(s)	1045
BanI	GGYRCC	1 cut(s)	1303
BanII	GRGCYC	2 cut(s)	266, 1272
BbrPI	CACGTG	1 cut(s)	17
Bbv12I	GWGCWC	1 cut(s)	696
BbvI	GCAGC	7 cut(s)	574, 712, 715, 886, 889, 892, 1268
BccI	CCATC	6 cut(s)	110, 224, 230, 298, 434, 962
BciT130I	CCWGG	3 cut(s)	851, 1068, 1460
BciVI	GTATCC	2 cut(s)	180, 406
BcnI	CCSGG	3 cut(s)	266, 267, 430
BcoDI	GTCTC	4 cut(s)	25, 97, 1353, 1466
BfaI	CTAG	3 cut(s)	378, 791, 1483
BfmI	CTRYAG	2 cut(s)	1125, 1254
BfrI	CTTAAG	1 cut(s)	662
BfuI	GTATCC	2 cut(s)	180, 406
BisI	GCNGC	8 cut(s)	518, 588, 701, 704, 900, 903, 906, 1257
BlsI	GCNGC	8 cut(s)	519, 589, 702, 705, 901, 904, 907, 1258
Bme1390I	CCNGG	6 cut(s)	266, 267, 430, 851, 1068, 1460
BmeRI	GACNNNNNGTC	1 cut(s)	721
BmeT110I	CYCGRG	1 cut(s)	265
BmgBI	CACGTC	1 cut(s)	1118
BmgT120I	GGNCC	2 cut(s)	761, 853
BmiI	GGNNCC	3 cut(s)	403, 847, 1305
BmrFI	CCNGG	6 cut(s)	266, 267, 430, 851, 1068, 1460
BmsI	GCATC	7 cut(s)	301, 415, 646, 952, 1195, 1324, 1451
BplI	GAGNNNNNCTC	2 cut(s)	1223, 1255
BpuEI	CTTGAG	3 cut(s)	266, 933, 1256
BpuMI	CCSGG	3 cut(s)	266, 267, 430
BsaAI	YACGTR	2 cut(s)	17, 1097
BsaBI	GATNNNNATC	2 cut(s)	168, 240
BsaI	GGTCTC	1 cut(s)	97
BsaJI	CCNNGG	4 cut(s)	265, 266, 849, 850
Bsc4I	CCNNNNNNNGG	2 cut(s)	116, 117
Bse118I	RCCGGY	1 cut(s)	520
Bse1I	ACTGG	2 cut(s)	608, 774
Bse3DI	GCAATG	1 cut(s)	1344
Bse8I	GATNNNNATC	2 cut(s)	168, 240
BseBI	CCWGG	3 cut(s)	851, 1068, 1460
BseDI	CCNNGG	4 cut(s)	265, 266, 849, 850
BseGI	GGATG	5 cut(s)	193, 309, 316, 943, 1432
BseJI	GATNNNNATC	2 cut(s)	168, 240
BseLI	CCNNNNNNNGG	2 cut(s)	116, 117
BseMI	GCAATG	1 cut(s)	1344
BseMII	CTCAG	2 cut(s)	721, 1221
BseNI	ACTGG	2 cut(s)	608, 774
BseRI	GAGGAG	4 cut(s)	150, 171, 704, 1404
BseX3I	CGGCCG	1 cut(s)	518
BseXI	GCAGC	7 cut(s)	574, 712, 715, 886, 889, 892, 1268
BseYI	CCCAGC	1 cut(s)	214
Bsh1236I	CGCG	1 cut(s)	297
Bsh1285I	CGRYCG	1 cut(s)	521
BshFI	GGCC	4 cut(s)	520, 763, 855, 1045
BshNI	GGYRCC	1 cut(s)	1303
BsiEI	CGRYCG	1 cut(s)	521
BsiHKAI	GWGCWC	1 cut(s)	696
BsiHKCI	CYCGRG	1 cut(s)	265
BsiSI	CCGG	3 cut(s)	266, 429, 521
BslFI	GGGAC	2 cut(s)	33, 1128
BslI	CCNNNNNNNGG	2 cut(s)	116, 117
BsmAI	GTCTC	4 cut(s)	25, 97, 1353, 1466
BsmFI	GGGAC	2 cut(s)	33, 1128
BsmI	GAATGC	2 cut(s)	379, 1463
BsnI	GGCC	4 cut(s)	520, 763, 855, 1045
Bso31I	GGTCTC	1 cut(s)	97
BsoBI	CYCGRG	1 cut(s)	265
Bsp1286I	GDGCHC	3 cut(s)	266, 696, 1272
Bsp143I	GATC	2 cut(s)	1165, 1192
BspACI	CCGC	5 cut(s)	39, 295, 517, 908, 1381
BspANI	GGCC	4 cut(s)	520, 763, 855, 1045
BspCNI	CTCAG	2 cut(s)	720, 1222
BspFNI	CGCG	1 cut(s)	297
BspHI	TCATGA	2 cut(s)	258, 886
BspLI	GGNNCC	3 cut(s)	403, 847, 1305
BspMAI	CTGCAG	1 cut(s)	1258
BspT107I	GGYRCC	1 cut(s)	1303
BspTI	CTTAAG	1 cut(s)	662
BspTNI	GGTCTC	1 cut(s)	97
BsrDI	GCAATG	1 cut(s)	1344
BsrFI	RCCGGY	1 cut(s)	520
BsrI	ACTGG	2 cut(s)	608, 774
BssAI	RCCGGY	1 cut(s)	520
BssECI	CCNNGG	4 cut(s)	265, 266, 849, 850
BssMI	GATC	2 cut(s)	1165, 1192
Bst2UI	CCWGG	3 cut(s)	851, 1068, 1460
Bst4CI	ACNGT	4 cut(s)	418, 868, 1024, 1087
Bst6I	CTCTTC	1 cut(s)	100
BstAFI	CTTAAG	1 cut(s)	662
BstBAI	YACGTR	2 cut(s)	17, 1097
BstC8I	GCNNGC	1 cut(s)	73
BstDEI	CTNAG	4 cut(s)	707, 1230, 1359, 1476
BstF5I	GGATG	5 cut(s)	193, 309, 316, 943, 1432
BstFNI	CGCG	1 cut(s)	297
BstKTI	GATC	2 cut(s)	1168, 1195
BstMAI	GTCTC	4 cut(s)	25, 97, 1353, 1466
BstMBI	GATC	2 cut(s)	1165, 1192
BstMCI	CGRYCG	1 cut(s)	521
BstMWI	GCNNNNNNNGC	6 cut(s)	278, 593, 700, 905, 911, 1460
BstNI	CCWGG	3 cut(s)	851, 1068, 1460
BstNSI	RCATGY	1 cut(s)	1421
BstSCI	CCNGG	6 cut(s)	264, 265, 428, 849, 1066, 1458
BstSFI	CTRYAG	2 cut(s)	1125, 1254
BstUI	CGCG	1 cut(s)	297
BstV1I	GCAGC	7 cut(s)	574, 712, 715, 886, 889, 892, 1268
BstZI	CGGCCG	1 cut(s)	518
BsuI	GTATCC	2 cut(s)	180, 406
BsuRI	GGCC	4 cut(s)	520, 763, 855, 1045
BtrI	CACGTC	1 cut(s)	1118
BtsCI	GGATG	5 cut(s)	193, 309, 316, 943, 1432
BtsI	GCAGTG	1 cut(s)	617
BtsIMutI	CAGTG	1 cut(s)	617
Cac8I	GCNNGC	1 cut(s)	73
CaiI	CAGNNNCTG	1 cut(s)	1289
CciI	TCATGA	2 cut(s)	258, 886
Cfr10I	RCCGGY	1 cut(s)	520
Cfr13I	GGNCC	2 cut(s)	761, 853
Cfr9I	CCCGGG	1 cut(s)	265
CseI	GACGC	1 cut(s)	872
Csp6I	GTAC	3 cut(s)	767, 1020, 1304
CviQI	GTAC	3 cut(s)	767, 1020, 1304
DdeI	CTNAG	4 cut(s)	707, 1230, 1359, 1476
DpnI	GATC	2 cut(s)	1167, 1194
DpnII	GATC	2 cut(s)	1165, 1192
DriI	GACNNNNNGTC	1 cut(s)	721
EaeI	YGGCCR	2 cut(s)	518, 1043
EagI	CGGCCG	1 cut(s)	518
Eam1104I	CTCTTC	1 cut(s)	100
Eam1105I	GACNNNNNGTC	1 cut(s)	721
EarI	CTCTTC	1 cut(s)	100
EciI	GGCGGA	1 cut(s)	28
EclXI	CGGCCG	1 cut(s)	518
Eco24I	GRGCYC	2 cut(s)	266, 1272
Eco31I	GGTCTC	1 cut(s)	97
Eco32I	GATATC	1 cut(s)	1035
Eco52I	CGGCCG	1 cut(s)	518
Eco57I	CTGAAG	3 cut(s)	81, 405, 1268
Eco72I	CACGTG	1 cut(s)	17
Eco88I	CYCGRG	1 cut(s)	265
EcoO109I	RGGNCCY	1 cut(s)	761
EcoRII	CCWGG	3 cut(s)	849, 1066, 1458
EcoRV	GATATC	1 cut(s)	1035
EcoT38I	GRGCYC	2 cut(s)	266, 1272
FalI	AAGNNNNNCTT	2 cut(s)	645, 677
FaqI	GGGAC	2 cut(s)	33, 1128
Fnu4HI	GCNGC	8 cut(s)	518, 588, 701, 704, 900, 903, 906, 1257
FokI	GGATG	5 cut(s)	200, 316, 323, 930, 1439
FriOI	GRGCYC	2 cut(s)	266, 1272
Fsp4HI	GCNGC	8 cut(s)	518, 588, 701, 704, 900, 903, 906, 1257
FspBI	CTAG	3 cut(s)	378, 791, 1483
GluI	GCNGC	8 cut(s)	518, 588, 701, 704, 900, 903, 906, 1257
GsaI	CCCAGC	1 cut(s)	218
HaeIII	GGCC	4 cut(s)	520, 763, 855, 1045
HapII	CCGG	3 cut(s)	266, 429, 521
HgaI	GACGC	1 cut(s)	872
HincII	GTYRAC	1 cut(s)	1236
HindII	GTYRAC	1 cut(s)	1236
HinfI	GANTC	4 cut(s)	745, 995, 1226, 1474
HpaII	CCGG	3 cut(s)	266, 429, 521
HphI	GGTGA	2 cut(s)	245, 1040
Hpy166II	GTNNAC	2 cut(s)	1236, 1294
Hpy188I	TCNGA	3 cut(s)	710, 1197, 1231
Hpy188III	TCNNGA	9 cut(s)	173, 201, 245, 259, 653, 887, 950, 1273, 1295
Hpy8I	GTNNAC	2 cut(s)	1236, 1294
HpyAV	CCTTC	3 cut(s)	363, 472, 545
HpyCH4III	ACNGT	4 cut(s)	418, 868, 1024, 1087
HpyCH4IV	ACGT	4 cut(s)	16, 326, 1096, 1117
HpyF10VI	GCNNNNNNNGC	6 cut(s)	278, 593, 700, 905, 911, 1460
HpyF3I	CTNAG	4 cut(s)	707, 1230, 1359, 1476
HpySE526I	ACGT	4 cut(s)	16, 326, 1096, 1117
KpnI	GGTACC	1 cut(s)	1307
Kzo9I	GATC	2 cut(s)	1165, 1192
LmnI	GCTCC	2 cut(s)	691, 1322
Lsp1109I	GCAGC	7 cut(s)	574, 712, 715, 886, 889, 892, 1268
LweI	GCATC	7 cut(s)	301, 415, 646, 952, 1195, 1324, 1451
MaeI	CTAG	3 cut(s)	378, 791, 1483
MaeII	ACGT	4 cut(s)	16, 326, 1096, 1117
MaeIII	GTNAC	5 cut(s)	643, 682, 983, 1075, 1400
MalI	GATC	2 cut(s)	1167, 1194
MboI	GATC	2 cut(s)	1165, 1192
MboII	GAAGA	4 cut(s)	87, 152, 560, 1424
MfeI	CAATTG	2 cut(s)	1101, 1188
MhlI	GDGCHC	3 cut(s)	266, 696, 1272
MlsI	TGGCCA	1 cut(s)	1045
MluCI	AATT	8 cut(s)	177, 396, 456, 600, 648, 1101, 1136, 1188
MluNI	TGGCCA	1 cut(s)	1045
MlyI	GAGTC	1 cut(s)	1468
MmeI	TCCRAC	1 cut(s)	112
Mox20I	TGGCCA	1 cut(s)	1045
MroXI	GAANNNNTTC	1 cut(s)	34
MscI	TGGCCA	1 cut(s)	1045
MseI	TTAA	5 cut(s)	395, 663, 801, 1313, 1355
Msp20I	TGGCCA	1 cut(s)	1045
MspA1I	CMGCKG	2 cut(s)	214, 1383
MspCI	CTTAAG	1 cut(s)	662
MspI	CCGG	3 cut(s)	266, 429, 521
MspR9I	CCNGG	6 cut(s)	266, 267, 430, 851, 1068, 1460
MunI	CAATTG	2 cut(s)	1101, 1188
Mva1269I	GAATGC	2 cut(s)	379, 1463
MvaI	CCWGG	3 cut(s)	851, 1068, 1460
MvnI	CGCG	1 cut(s)	297
MwoI	GCNNNNNNNGC	6 cut(s)	278, 593, 700, 905, 911, 1460
NciI	CCSGG	3 cut(s)	266, 267, 430
NdeII	GATC	2 cut(s)	1165, 1192
NlaIV	GGNNCC	3 cut(s)	403, 847, 1305
NmuCI	GTSAC	2 cut(s)	643, 1400
NspI	RCATGY	1 cut(s)	1421
PagI	TCATGA	2 cut(s)	258, 886
PasI	CCCWGGG	1 cut(s)	850
PciI	ACATGT	1 cut(s)	1417
PctI	GAATGC	2 cut(s)	379, 1463
PdmI	GAANNNNTTC	1 cut(s)	34
PfeI	GAWTC	3 cut(s)	745, 995, 1226
PfoI	TCCNGGA	1 cut(s)	1066
PkrI	GCNGC	8 cut(s)	519, 589, 702, 705, 901, 904, 907, 1258
PleI	GAGTC	1 cut(s)	1468
PmaCI	CACGTG	1 cut(s)	17
PmlI	CACGTG	1 cut(s)	17
PpsI	GAGTC	1 cut(s)	1468
Ppu21I	YACGTR	2 cut(s)	17, 1097
PscI	ACATGT	1 cut(s)	1417
Psp6I	CCWGG	3 cut(s)	849, 1066, 1458
PspCI	CACGTG	1 cut(s)	17
PspFI	CCCAGC	1 cut(s)	214
PspGI	CCWGG	3 cut(s)	849, 1066, 1458
PspN4I	GGNNCC	3 cut(s)	403, 847, 1305
PspPI	GGNCC	2 cut(s)	761, 853
PstI	CTGCAG	1 cut(s)	1258
PstNI	CAGNNNCTG	1 cut(s)	1289
PvuII	CAGCTG	1 cut(s)	214
RsaI	GTAC	3 cut(s)	768, 1021, 1305
RsaNI	GTAC	3 cut(s)	767, 1020, 1304
SaqAI	TTAA	5 cut(s)	395, 663, 801, 1313, 1355
SatI	GCNGC	8 cut(s)	518, 588, 701, 704, 900, 903, 906, 1257
Sau3AI	GATC	2 cut(s)	1165, 1192
Sau96I	GGNCC	2 cut(s)	761, 853
SchI	GAGTC	1 cut(s)	1468
ScrFI	CCNGG	6 cut(s)	266, 267, 430, 851, 1068, 1460
SduI	GDGCHC	3 cut(s)	266, 696, 1272
SfaNI	GCATC	7 cut(s)	301, 415, 646, 952, 1195, 1324, 1451
SfcI	CTRYAG	2 cut(s)	1125, 1254
SmaI	CCCGGG	1 cut(s)	267
SmlI	CTYRAG	4 cut(s)	245, 662, 948, 1271
SmoI	CTYRAG	4 cut(s)	245, 662, 948, 1271
Sse9I	AATT	8 cut(s)	177, 396, 456, 600, 648, 1101, 1136, 1188
SsiI	CCGC	5 cut(s)	39, 295, 517, 908, 1381
SspMI	CTAG	3 cut(s)	378, 791, 1483
StyD4I	CCNGG	6 cut(s)	264, 265, 428, 849, 1066, 1458
TaaI	ACNGT	4 cut(s)	418, 868, 1024, 1087
TaiI	ACGT	4 cut(s)	19, 329, 1099, 1120
TaqI	TCGA	4 cut(s)	358, 1037, 1241, 1387
TasI	AATT	8 cut(s)	177, 396, 456, 600, 648, 1101, 1136, 1188
TatI	WGTACW	2 cut(s)	766, 1019
TauI	GCSGC	1 cut(s)	520
TfiI	GAWTC	3 cut(s)	745, 995, 1226
Tru1I	TTAA	5 cut(s)	395, 663, 801, 1313, 1355
Tru9I	TTAA	5 cut(s)	395, 663, 801, 1313, 1355
TscAI	CASTG	1 cut(s)	624
TseFI	GTSAC	2 cut(s)	643, 1400
TseI	GCWGC	7 cut(s)	587, 700, 703, 899, 902, 905, 1256
Tsp45I	GTSAC	2 cut(s)	643, 1400
TspDTI	ATGAA	8 cut(s)	197, 204, 247, 561, 565, 1149, 1170, 1456
TspGWI	ACGGA	2 cut(s)	46, 664
TspMI	CCCGGG	1 cut(s)	265
TspRI	CASTG	1 cut(s)	624
Vha464I	CTTAAG	1 cut(s)	662
XapI	RAATTY	2 cut(s)	177, 600
XceI	RCATGY	1 cut(s)	1421
XcmI	CCANNNNNNNNNTGG	3 cut(s)	58, 726, 857
XmaI	CCCGGG	1 cut(s)	265
XmnI	GAANNNNTTC	1 cut(s)	34
XspI	CTAG	3 cut(s)	378, 791, 1483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.