Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000685

Physical Location & Seq

Genomic Coordinates Forward (+)

15940956 .. 15944592

Gene Structure 3637 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G013560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1263 bp

ATGCCCAACACAACTCCCAGTGGGCCCTTACATCATCCCCCACCTCCAGCCGTCACCATCCCCATCACCACAAACAATCCAGAGAGACCGAACCTTATGCCTTTTAAAGGATCAGAAAGCTTGCACCGAGTTGCAGCAGCCATGGCAGTTGCTACACGTGTCTCCCACAGAACCCATTCCGCCATTAGTCCCACCTCCGTTTTGGCTCTGGCTTGCCATTTCTTGCTTCTGGTCTCTTCAGCCATCACTCCCTGTTTTGGGTTTTCTGGTGTTGGAGGAGAAGATGAGGGAAACAGAGGAGGGGATTCGTATCCTGAAATTTTGAGGGATGAAGCTGTGTCAAGACTTCATCAGCTGGGAAAGGTCAGTGATGGTGATGGTTATCTTGAGAGGATATTCATGAGCCCAGCAGCTGTGAGGGCTGGAAATCTTATCCGCGAATGGATGGAGGATGCTGGTTTGCGAACGTGGGTTGATTGCTTGGGAAATGTACATGGTCGAGTTGAGGGTCGGAATGCTACTGCTCAGGCTCTAATACTTGGTTCTCATTTGGATACTGTTGTTGACGCGGGGATATTTGATGGGTCTTTAGGCATCATTTCTGTGGTATCTGCATTGAAGGTTTTGAGTATCAATGGAAAATTGGGAGAACTAAAGCGGCCGGTTGAGGTAATAGCATTTAGTGATGAAGAAGGAGTAAGGTTTCAGTCTACATTCATAGGAAGTGCTGCTATAGCTGGAATTTTACCAGTTTCAGCACTGCAAATAACTGATAAAAGTGGTGTGACAATTCAAGATGCTCTTAAGAGAAACTTCATAGAAGTTACAGAGGAGCACTTGCAGCAGCTCAGATATGACCCAAAGTCAGTTTGGGGTTATGTTGAGATTCACATTGAACAAGGGCCTGTACTGGAATGGGTTGGTTTTCCTCTAGGAGTTGTTAAAGGCATAGCTGGACAGACAAGACTAAAGGTTACAATGAGAGGTTCCCAGGGGCATGCTGGAACAGTTCCAATGTCCATGCGTCATGACCCTATGGCTGCTGCTGCGGAAGCCATTGTATTATTAGAAAGCCTATGTAAGCATCCTCAAGATTTTCTGTCTTTTGATGGTCAATGCAAAAGTTACTCATTAGAATCACTTTCAACTTCACTCGTTTGTACTGTTGGTGAGATATCGACTTGGCCAAGTGCAAGTAATGTTATTCCAGGACAGGCAAGAAGTTTATCTCCTGACATCGCTAAATTTGATATTAAATGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000255 GO:0000256 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009987 GO:0010135 GO:0010136 GO:0012505 GO:0016787 GO:0016810 GO:0016813 GO:0017144 GO:0019439 GO:0034641 GO:0042737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043605 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046113 GO:0046483 GO:0046700 GO:0047652 GO:0055086 GO:0071704 GO:0072521 GO:0072523 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko01120 map00230 map01120

Pfam Domains

Protein Families

M20_dimer Peptidase_M20 Peptidase_M28

Protein Analysis

420

Amino Acids

44.89

Weight (kDa)

5.96

Isoelectric Point (pI)

40.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M28	PF04389	163 - 246	1e-07	Peptidase family M28
Peptidase_M20	PF01546	180 - 353	9.5e-06	Peptidase family M20/M25/M40

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000685)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20070 AT4G20070
fragaria_vesca	FvH4_3g12850 FvH4_3g12850 FvH4_3g12850
malus_domestica	MD10G1228200.v1.1
prunus_persica	Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1
pyrus_communis	pycom10g19170
rosa_chinensis	RchiOBHm_Chr1g0315031 RchiOBHm_Chr1g0315061 RchiOBHm_Chr1g0315091 RchiOBHm_Chr1g0315141 RchiOBHm_Chr1g0315151 RchiOBHm_Chr1g0315201 RchiOBHm_Chr1g0315231 RchiOBHm_Chr1g0315241 RchiOBHm_Chr1g0315311 RchiOBHm_Chr1g0315381 RchiOBHm_Chr1g0315441 RchiOBHm_Chr1g0315471 RchiOBHm_Chr1g0315531 RchiOBHm_Chr1g0315541 RchiOBHm_Chr1g0315581 RchiOBHm_Chr1g0315591 RchiOBHm_Chr1g0315611 RchiOBHm_Chr5g0020791 RchiOBHm_Chr5g0020891 RchiOBHm_Chr5g0021441 RchiOBHm_Chr5g0021511 RchiOBHm_Chr5g0021521 RchiOBHm_Chr5g0029451 RchiOBHm_Chr5g0029471
rosa_laevigata	RLG00000030744 RLG00000030748 RLG00000032563 RLG00000032611
rosa_multiflora	Rmu_sc0000576.1_g000021 Rmu_sc0002052.1_g000003 Rmu_sc0004180.1_g000017 Rmu_sc0004180.1_g000030 Rmu_sc0004180.1_g000035 Rmu_sc0023070.1_g000002 Rmu_ssc0000244.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057130 Rroxscaffold_1G00057510 Rroxscaffold_4G00331580
rosa_rugosa	Rorug01G0004300 Rorug05G0063000 Rorug05G0067300
rosa_samantha	Rh1AG015000 Rh1AG015600 Rh1BG007400 Rh1BG007800 Rh1CG013200 Rh5AG152900 Rh5BG152700 Rh5BG155800 Rh5CG164200 Rh5CG164700 Rh5CG170000 Rh5CG227100
rosa_wichuraiana	Rw1G000740 Rw1G000780 Rw1G000810 Rw1G000840 Rw1G000870 Rw1G000900 Rw5G013560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	710
AccII	CGCG	2 cut(s)	438, 569
AciI	CCGC	5 cut(s)	180, 436, 569, 658, 1049
AclWI	GGATC	1 cut(s)	118
AcoI	YGGCCR	2 cut(s)	659, 1184
AcsI	RAATTY	3 cut(s)	318, 741, 1244
AcuI	CTGAAG	1 cut(s)	222
AcvI	CACGTG	1 cut(s)	158
AfaI	GTAC	3 cut(s)	492, 909, 1162
AfiI	CCNNNNNNNGG	3 cut(s)	107, 257, 258
AflII	CTTAAG	1 cut(s)	803
AflIII	ACRYGT	2 cut(s)	155, 157
AgsI	TTSAA	4 cut(s)	619, 794, 896, 1146
AhdI	GACNNNNNGTC	1 cut(s)	862
AjnI	CCWGG	2 cut(s)	990, 1207
AluBI	AGCT	7 cut(s)	120, 335, 355, 413, 737, 847, 953
AluI	AGCT	7 cut(s)	120, 335, 355, 413, 737, 847, 953
Alw21I	GWGCWC	1 cut(s)	837
Alw26I	GTCTC	3 cut(s)	79, 166, 238
AlwI	GGATC	1 cut(s)	118
AlwNI	CAGNNNCTG	1 cut(s)	413
AoxI	GGCC	4 cut(s)	23, 659, 902, 1184
ApaI	GGGCCC	1 cut(s)	27
ApeKI	GCWGC	9 cut(s)	134, 137, 410, 728, 841, 844, 1040, 1043, 1046
ApoI	RAATTY	3 cut(s)	318, 741, 1244
Asp700I	GAANNNNTTC	1 cut(s)	175
AspS9I	GGNCC	3 cut(s)	23, 24, 902
AsuHPI	GGTGA	4 cut(s)	46, 58, 386, 1181
BaeGI	GKGCMC	1 cut(s)	27
BaeI	ACNNNNGTAYC	2 cut(s)	546, 579
BalI	TGGCCA	1 cut(s)	1186
BanII	GRGCYC	2 cut(s)	27, 407
BbrPI	CACGTG	1 cut(s)	158
Bbv12I	GWGCWC	1 cut(s)	837
BbvI	GCAGC	9 cut(s)	146, 149, 422, 715, 853, 856, 1027, 1030, 1033
BccI	CCATC	8 cut(s)	65, 71, 251, 365, 371, 439, 575, 1103
BceAI	ACGGC	1 cut(s)	35
BcgI	CGANNNNNNTGC	2 cut(s)	79, 113
BciT130I	CCWGG	2 cut(s)	992, 1209
BciVI	GTATCC	2 cut(s)	321, 547
BcoDI	GTCTC	3 cut(s)	79, 166, 238
BfaI	CTAG	1 cut(s)	932
BfmI	CTRYAG	1 cut(s)	732
BfrI	CTTAAG	1 cut(s)	803
BfuI	GTATCC	2 cut(s)	321, 547
Bme1390I	CCNGG	2 cut(s)	992, 1209
BmeRI	GACNNNNNGTC	1 cut(s)	862
BmgT120I	GGNCC	3 cut(s)	23, 24, 902
BmiI	GGNNCC	2 cut(s)	25, 988
BmrFI	CCNGG	2 cut(s)	992, 1209
BmrI	ACTGGG	1 cut(s)	12
BmsI	GCATC	4 cut(s)	442, 603, 787, 1093
BmuI	ACTGGG	1 cut(s)	12
BpmI	CTGGAG	1 cut(s)	30
Bpu10I	CCTNAGC	1 cut(s)	525
BpuEI	CTTGAG	2 cut(s)	407, 1074
BsaAI	YACGTR	1 cut(s)	158
BsaBI	GATNNNNATC	2 cut(s)	309, 381
BsaI	GGTCTC	2 cut(s)	79, 238
BsaJI	CCNNGG	3 cut(s)	141, 990, 991
Bsc4I	CCNNNNNNNGG	3 cut(s)	107, 257, 258
Bse118I	RCCGGY	1 cut(s)	661
Bse1I	ACTGG	3 cut(s)	18, 749, 915
Bse8I	GATNNNNATC	2 cut(s)	309, 381
BseBI	CCWGG	2 cut(s)	992, 1209
BseDI	CCNNGG	3 cut(s)	141, 990, 991
BseGI	GGATG	6 cut(s)	34, 57, 334, 450, 457, 1084
BseJI	GATNNNNATC	2 cut(s)	309, 381
BseLI	CCNNNNNNNGG	3 cut(s)	107, 257, 258
BseMII	CTCAG	2 cut(s)	539, 862
BseNI	ACTGG	3 cut(s)	18, 749, 915
BseRI	GAGGAG	3 cut(s)	291, 312, 845
BseSI	GKGCMC	1 cut(s)	27
BseX3I	CGGCCG	1 cut(s)	659
BseXI	GCAGC	9 cut(s)	146, 149, 422, 715, 853, 856, 1027, 1030, 1033
BseYI	CCCAGC	2 cut(s)	355, 406
Bsh1236I	CGCG	2 cut(s)	438, 569
Bsh1285I	CGRYCG	1 cut(s)	662
BshFI	GGCC	4 cut(s)	25, 661, 904, 1186
BsiEI	CGRYCG	1 cut(s)	662
BsiHKAI	GWGCWC	1 cut(s)	837
BsiSI	CCGG	1 cut(s)	662
BslFI	GGGAC	1 cut(s)	174
BslI	CCNNNNNNNGG	3 cut(s)	107, 257, 258
BsmAI	GTCTC	3 cut(s)	79, 166, 238
BsmFI	GGGAC	1 cut(s)	174
BsmI	GAATGC	1 cut(s)	520
BsnI	GGCC	4 cut(s)	25, 661, 904, 1186
Bso31I	GGTCTC	2 cut(s)	79, 238
Bsp120I	GGGCCC	1 cut(s)	23
Bsp1286I	GDGCHC	3 cut(s)	27, 407, 837
Bsp1407I	TGTACA	1 cut(s)	490
Bsp143I	GATC	1 cut(s)	110
Bsp19I	CCATGG	1 cut(s)	141
BspACI	CCGC	5 cut(s)	180, 436, 569, 658, 1049
BspANI	GGCC	4 cut(s)	25, 661, 904, 1186
BspCNI	CTCAG	2 cut(s)	538, 861
BspFNI	CGCG	2 cut(s)	438, 569
BspHI	TCATGA	2 cut(s)	399, 1027
BspLI	GGNNCC	2 cut(s)	25, 988
BspPI	GGATC	1 cut(s)	118
BspTI	CTTAAG	1 cut(s)	803
BspTNI	GGTCTC	2 cut(s)	79, 238
BsrFI	RCCGGY	1 cut(s)	661
BsrGI	TGTACA	1 cut(s)	490
BsrI	ACTGG	3 cut(s)	18, 749, 915
BssAI	RCCGGY	1 cut(s)	661
BssECI	CCNNGG	3 cut(s)	141, 990, 991
BssMI	GATC	1 cut(s)	110
BssT1I	CCWWGG	1 cut(s)	141
Bst2UI	CCWGG	2 cut(s)	992, 1209
Bst4CI	ACNGT	3 cut(s)	559, 1009, 1165
Bst6I	CTCTTC	1 cut(s)	241
BstAFI	CTTAAG	1 cut(s)	803
BstAUI	TGTACA	1 cut(s)	490
BstBAI	YACGTR	1 cut(s)	158
BstC8I	GCNNGC	3 cut(s)	122, 214, 999
BstDEI	CTNAG	2 cut(s)	525, 848
BstDSI	CCRYGG	1 cut(s)	141
BstENI	CCTNNNNNAGG	1 cut(s)	105
BstF5I	GGATG	6 cut(s)	34, 57, 334, 450, 457, 1084
BstFNI	CGCG	2 cut(s)	438, 569
BstKTI	GATC	1 cut(s)	113
BstMAI	GTCTC	3 cut(s)	79, 166, 238
BstMBI	GATC	1 cut(s)	110
BstMCI	CGRYCG	1 cut(s)	662
BstMWI	GCNNNNNNNGC	6 cut(s)	143, 419, 734, 841, 1046, 1052
BstNI	CCWGG	2 cut(s)	992, 1209
BstNSI	RCATGY	1 cut(s)	1001
BstSCI	CCNGG	2 cut(s)	990, 1207
BstSFI	CTRYAG	1 cut(s)	732
BstSLI	GKGCMC	1 cut(s)	27
BstUI	CGCG	2 cut(s)	438, 569
BstV1I	GCAGC	9 cut(s)	146, 149, 422, 715, 853, 856, 1027, 1030, 1033
BstZI	CGGCCG	1 cut(s)	659
BsuI	GTATCC	2 cut(s)	321, 547
BsuRI	GGCC	4 cut(s)	25, 661, 904, 1186
BtgI	CCRYGG	1 cut(s)	141
BtgZI	GCGATG	1 cut(s)	1222
BtsCI	GGATG	6 cut(s)	34, 57, 334, 450, 457, 1084
BtsI	GCAGTG	1 cut(s)	758
BtsIMutI	CAGTG	3 cut(s)	25, 373, 758
Cac8I	GCNNGC	3 cut(s)	122, 214, 999
CaiI	CAGNNNCTG	1 cut(s)	413
CciI	TCATGA	2 cut(s)	399, 1027
Cfr10I	RCCGGY	1 cut(s)	661
Cfr13I	GGNCC	3 cut(s)	23, 24, 902
CseI	GACGC	2 cut(s)	575, 1013
Csp6I	GTAC	3 cut(s)	491, 908, 1161
CviAII	CATG	6 cut(s)	142, 400, 494, 998, 1021, 1028
CviQI	GTAC	3 cut(s)	491, 908, 1161
DdeI	CTNAG	2 cut(s)	525, 848
DpnI	GATC	1 cut(s)	112
DpnII	GATC	1 cut(s)	110
DraI	TTTAAA	1 cut(s)	106
DriI	GACNNNNNGTC	1 cut(s)	862
EaeI	YGGCCR	2 cut(s)	659, 1184
EagI	CGGCCG	1 cut(s)	659
Eam1104I	CTCTTC	1 cut(s)	241
Eam1105I	GACNNNNNGTC	1 cut(s)	862
EarI	CTCTTC	1 cut(s)	241
EciI	GGCGGA	1 cut(s)	169
EclXI	CGGCCG	1 cut(s)	659
Eco130I	CCWWGG	1 cut(s)	141
Eco24I	GRGCYC	2 cut(s)	27, 407
Eco31I	GGTCTC	2 cut(s)	79, 238
Eco32I	GATATC	1 cut(s)	1176
Eco52I	CGGCCG	1 cut(s)	659
Eco57I	CTGAAG	1 cut(s)	222
Eco72I	CACGTG	1 cut(s)	158
EcoNI	CCTNNNNNAGG	1 cut(s)	105
EcoO109I	RGGNCCY	2 cut(s)	24, 902
EcoRII	CCWGG	2 cut(s)	990, 1207
EcoRV	GATATC	1 cut(s)	1176
EcoT14I	CCWWGG	1 cut(s)	141
EcoT38I	GRGCYC	2 cut(s)	27, 407
ErhI	CCWWGG	1 cut(s)	141
FaeI	CATG	6 cut(s)	145, 403, 497, 1001, 1024, 1031
FalI	AAGNNNNNCTT	4 cut(s)	786, 818, 797, 829
FaqI	GGGAC	1 cut(s)	174
FatI	CATG	6 cut(s)	141, 399, 493, 997, 1020, 1027
FauI	CCCGC	1 cut(s)	562
FblI	GTMKAC	1 cut(s)	710
FokI	GGATG	6 cut(s)	21, 44, 341, 457, 464, 1071
FriOI	GRGCYC	2 cut(s)	27, 407
FspBI	CTAG	1 cut(s)	932
GsaI	CCCAGC	2 cut(s)	359, 410
GsuI	CTGGAG	1 cut(s)	30
HaeIII	GGCC	4 cut(s)	25, 661, 904, 1186
HapII	CCGG	1 cut(s)	662
HgaI	GACGC	2 cut(s)	575, 1013
Hin1II	CATG	6 cut(s)	145, 403, 497, 1001, 1024, 1031
HincII	GTYRAC	1 cut(s)	565
HindII	GTYRAC	1 cut(s)	565
HindIII	AAGCTT	1 cut(s)	118
HinfI	GANTC	3 cut(s)	305, 886, 1136
HpaII	CCGG	1 cut(s)	662
HphI	GGTGA	4 cut(s)	46, 58, 386, 1181
Hpy166II	GTNNAC	2 cut(s)	565, 711
Hpy188I	TCNGA	3 cut(s)	115, 513, 851
Hpy188III	TCNNGA	9 cut(s)	80, 314, 342, 386, 400, 794, 1028, 1091, 1232
Hpy8I	GTNNAC	2 cut(s)	565, 711
HpyAV	CCTTC	2 cut(s)	613, 686
HpyCH4III	ACNGT	3 cut(s)	559, 1009, 1165
HpyCH4IV	ACGT	2 cut(s)	157, 467
HpyCH4V	TGCA	7 cut(s)	124, 134, 614, 763, 841, 1119, 1193
HpyF10VI	GCNNNNNNNGC	6 cut(s)	143, 419, 734, 841, 1046, 1052
HpyF3I	CTNAG	2 cut(s)	525, 848
HpySE526I	ACGT	2 cut(s)	157, 467
Hsp92II	CATG	6 cut(s)	145, 403, 497, 1001, 1024, 1031
Kzo9I	GATC	1 cut(s)	110
LmnI	GCTCC	1 cut(s)	832
Lsp1109I	GCAGC	9 cut(s)	146, 149, 422, 715, 853, 856, 1027, 1030, 1033
LweI	GCATC	4 cut(s)	442, 603, 787, 1093
MaeI	CTAG	1 cut(s)	932
MaeII	ACGT	2 cut(s)	157, 467
MaeIII	GTNAC	5 cut(s)	52, 784, 823, 973, 1124
MalI	GATC	1 cut(s)	112
MboI	GATC	1 cut(s)	110
MboII	GAAGA	3 cut(s)	228, 293, 701
MhlI	GDGCHC	3 cut(s)	27, 407, 837
MlsI	TGGCCA	1 cut(s)	1186
MluCI	AATT	5 cut(s)	318, 641, 741, 789, 1244
MluNI	TGGCCA	1 cut(s)	1186
MmeI	TCCRAC	2 cut(s)	253, 491
Mox20I	TGGCCA	1 cut(s)	1186
MroXI	GAANNNNTTC	1 cut(s)	175
MscI	TGGCCA	1 cut(s)	1186
MseI	TTAA	4 cut(s)	105, 804, 942, 1254
MslI	CAYNNNNRTG	1 cut(s)	602
Msp20I	TGGCCA	1 cut(s)	1186
MspA1I	CMGCKG	2 cut(s)	355, 413
MspCI	CTTAAG	1 cut(s)	803
MspI	CCGG	1 cut(s)	662
MspR9I	CCNGG	2 cut(s)	992, 1209
Mva1269I	GAATGC	1 cut(s)	520
MvaI	CCWGG	2 cut(s)	992, 1209
MvnI	CGCG	2 cut(s)	438, 569
MwoI	GCNNNNNNNGC	6 cut(s)	143, 419, 734, 841, 1046, 1052
NcoI	CCATGG	1 cut(s)	141
NdeII	GATC	1 cut(s)	110
NlaIII	CATG	6 cut(s)	145, 403, 497, 1001, 1024, 1031
NlaIV	GGNNCC	2 cut(s)	25, 988
NmuCI	GTSAC	2 cut(s)	52, 784
NspI	RCATGY	1 cut(s)	1001
PaeI	GCATGC	1 cut(s)	1001
PagI	TCATGA	2 cut(s)	399, 1027
PasI	CCCWGGG	1 cut(s)	991
PctI	GAATGC	1 cut(s)	520
PdmI	GAANNNNTTC	1 cut(s)	175
PfeI	GAWTC	3 cut(s)	305, 886, 1136
PfoI	TCCNGGA	1 cut(s)	1207
PmaCI	CACGTG	1 cut(s)	158
PmlI	CACGTG	1 cut(s)	158
Ppu21I	YACGTR	1 cut(s)	158
Psp6I	CCWGG	2 cut(s)	990, 1207
PspCI	CACGTG	1 cut(s)	158
PspFI	CCCAGC	2 cut(s)	355, 406
PspGI	CCWGG	2 cut(s)	990, 1207
PspN4I	GGNNCC	2 cut(s)	25, 988
PspOMI	GGGCCC	1 cut(s)	23
PspPI	GGNCC	3 cut(s)	23, 24, 902
PstNI	CAGNNNCTG	1 cut(s)	413
PvuII	CAGCTG	2 cut(s)	355, 413
RsaI	GTAC	3 cut(s)	492, 909, 1162
RsaNI	GTAC	3 cut(s)	491, 908, 1161
RseI	CAYNNNNRTG	1 cut(s)	602
SaqAI	TTAA	4 cut(s)	105, 804, 942, 1254
Sau3AI	GATC	1 cut(s)	110
Sau96I	GGNCC	3 cut(s)	23, 24, 902
ScrFI	CCNGG	2 cut(s)	992, 1209
SduI	GDGCHC	3 cut(s)	27, 407, 837
SfaNI	GCATC	4 cut(s)	442, 603, 787, 1093
SfcI	CTRYAG	1 cut(s)	732
SmiMI	CAYNNNNRTG	1 cut(s)	602
SmlI	CTYRAG	3 cut(s)	386, 803, 1089
SmoI	CTYRAG	3 cut(s)	386, 803, 1089
SphI	GCATGC	1 cut(s)	1001
Sse9I	AATT	5 cut(s)	318, 641, 741, 789, 1244
SsiI	CCGC	5 cut(s)	180, 436, 569, 658, 1049
SspMI	CTAG	1 cut(s)	932
StyD4I	CCNGG	2 cut(s)	990, 1207
StyI	CCWWGG	1 cut(s)	141
TaaI	ACNGT	3 cut(s)	559, 1009, 1165
TaiI	ACGT	2 cut(s)	160, 470
TaqI	TCGA	2 cut(s)	499, 1178
TaqII	GACCGA	1 cut(s)	103
TasI	AATT	5 cut(s)	318, 641, 741, 789, 1244
TatI	WGTACW	3 cut(s)	490, 907, 1160
TauI	GCSGC	1 cut(s)	661
TfiI	GAWTC	3 cut(s)	305, 886, 1136
Tru1I	TTAA	4 cut(s)	105, 804, 942, 1254
Tru9I	TTAA	4 cut(s)	105, 804, 942, 1254
TscAI	CASTG	3 cut(s)	25, 373, 765
TseFI	GTSAC	2 cut(s)	52, 784
TseI	GCWGC	9 cut(s)	134, 137, 410, 728, 841, 844, 1040, 1043, 1046
Tsp45I	GTSAC	2 cut(s)	52, 784
TspDTI	ATGAA	6 cut(s)	338, 345, 388, 702, 706, 805
TspGWI	ACGGA	1 cut(s)	187
TspRI	CASTG	3 cut(s)	25, 373, 765
Vha464I	CTTAAG	1 cut(s)	803
XagI	CCTNNNNNAGG	1 cut(s)	105
XapI	RAATTY	3 cut(s)	318, 741, 1244
XceI	RCATGY	1 cut(s)	1001
XcmI	CCANNNNNNNNNTGG	3 cut(s)	199, 867, 998
XmiI	GTMKAC	1 cut(s)	710
XmnI	GAANNNNTTC	1 cut(s)	175
XspI	CTAG	1 cut(s)	932

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.