Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0000685

Physical Location & Seq

Genomic Coordinates Forward (+)

2651416 .. 2675805

Gene Structure 24390 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG015600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGACAGTGGTTACACGTGTCTCCCAGAGAACCCATTCCGCCATTAGTCCCACCTCCGTTTTGGCTCTGGCTTGCCCTTTCTTGCTTCTGGTCTCTTCACCCATCACTCCCTGTTTTGGATTTTCTGGTGTTGGACAAGAAGATGAGAGAAACAGAGGAGGGGATTTGTATCAGGAAATATTGAGAGATGAGGCTGTGGCAAGACTTCATCAGCTTGGAAAGGTAAGTGATGGTGATGGTTATCTTGAGAGGATATTCATGAGCCCAGCAGCTGTGAGGGCTGGAAATCTTATCCGCGAATGGATGGAGGATGCTGGTTTGTGGGTTGATTGCTTGGGAAATGTACATGGTCGAGTTGAGGGTACAAATGCTAGTGCTGAGGTTCTAATACTTGGTTCTCATTTGGATACTGTTGTTGATGCCAGGATATTGGATGGGTCTTTAGGCATCATTTCTGTGGTATCTGCATTGAAGGTTTTGAGTATCGATGGAAAATTGGGAGACCTAAAGCGGCTGGTTGAGGTAATAGCATTTAGTGATGAAGAAGGAGAAAGGTTTCAGTCTACATTCATAGGAAGTGCTGCTATAGCTGGAATTTTACCAGTTTCAGCACTGCAAATAACTGATAAAAGTGGTGTGACAATTCAAGATGCTCTTAAGAAAAACTCCATTGAAGTTACAGAGGAGCACTTGCAGCAGCTCAGATATGACCCAAAGTCAGTTTGGGGTTATGTTGAGATTCACATTGAACAAGGGTCTGTACTGGAATGGGTTGGTTTTCCTCTTGGAGTTGTTAAAGGCATAGCTGGACAGACAAGACTAAAGGTTACAATGAGAGGTTCCCAGGGGCATGCTGGAACAGTTCCAATGTCCATGCATCATGACCCTATGGCTGCTGCTGCGGAAGCCATTGTATTGTTAGAAAGCCTATGTAAGCATCCGCAAGATTTTCTGTCTTTTGATGGTCAATGCAAAAGTTACTCATTAGAATCACTTTCAACTTCACTCGTTTGTACCATTGGTGAGATATCGACTTGGCCAAGTGCAAGTAATGTTATTCCAGGACAGGGAACATTCACAGTAGATTTACGTGCAATTGATGACATAGGACGTGAAGCTGTTGTATGTGAATTATCTAACCGATTGTATCAAATATGTGATAGGCGTACAGTTTTGTGCACAATTGATCGTAAGCATGATGCAAATGCAGTCATTTGCGATTCTGAGCTGACTTGGAAGCTGAAGTCAGCAGCTTATCTTGGGCTCAAGAGAATGACAGGTTCTGTTCAGGATGAAGTACCTGTATTAATGAGTGGAGCAGGACATGATGCAATGGCTCTGTCTCATTTAAATAAGGTGGGTATGCTTTTTGTCCGCTGTCGAGGAGGCATAAGTCACTTCCCTGAAGAACATGTATTGGATGATGATGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000255 GO:0000256 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009987 GO:0010135 GO:0010136 GO:0012505 GO:0016787 GO:0016810 GO:0016813 GO:0017144 GO:0019439 GO:0034641 GO:0042737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043605 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046113 GO:0046483 GO:0046700 GO:0047652 GO:0055086 GO:0071704 GO:0072521 GO:0072523 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko01120 map00230 map01120

Pfam Domains

Protein Families

M20_dimer Peptidase_M20 Peptidase_M28

Protein Analysis

477

Amino Acids

51.6

Weight (kDa)

5.28

Isoelectric Point (pI)

36.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M28	PF04389	114 - 197	9.6e-06	Peptidase family M28
Peptidase_M20	PF01546	131 - 476	1.1e-09	Peptidase family M20/M25/M40
M20_dimer	PF07687	270 - 382	9e-06	Peptidase dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000685)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20070 AT4G20070
fragaria_vesca	FvH4_3g12850 FvH4_3g12850 FvH4_3g12850
malus_domestica	MD10G1228200.v1.1
prunus_persica	Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1
pyrus_communis	pycom10g19170
rosa_chinensis	RchiOBHm_Chr1g0315031 RchiOBHm_Chr1g0315061 RchiOBHm_Chr1g0315091 RchiOBHm_Chr1g0315141 RchiOBHm_Chr1g0315151 RchiOBHm_Chr1g0315201 RchiOBHm_Chr1g0315231 RchiOBHm_Chr1g0315241 RchiOBHm_Chr1g0315311 RchiOBHm_Chr1g0315381 RchiOBHm_Chr1g0315441 RchiOBHm_Chr1g0315471 RchiOBHm_Chr1g0315531 RchiOBHm_Chr1g0315541 RchiOBHm_Chr1g0315581 RchiOBHm_Chr1g0315591 RchiOBHm_Chr1g0315611 RchiOBHm_Chr5g0020791 RchiOBHm_Chr5g0020891 RchiOBHm_Chr5g0021441 RchiOBHm_Chr5g0021511 RchiOBHm_Chr5g0021521 RchiOBHm_Chr5g0029451 RchiOBHm_Chr5g0029471
rosa_laevigata	RLG00000030744 RLG00000030748 RLG00000032563 RLG00000032611
rosa_multiflora	Rmu_sc0000576.1_g000021 Rmu_sc0002052.1_g000003 Rmu_sc0004180.1_g000017 Rmu_sc0004180.1_g000030 Rmu_sc0004180.1_g000035 Rmu_sc0023070.1_g000002 Rmu_ssc0000244.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057130 Rroxscaffold_1G00057510 Rroxscaffold_4G00331580
rosa_rugosa	Rorug01G0004300 Rorug05G0063000 Rorug05G0067300
rosa_samantha	Rh1AG015000 Rh1AG015600 Rh1BG007400 Rh1BG007800 Rh1CG013200 Rh5AG152900 Rh5BG152700 Rh5BG155800 Rh5CG164200 Rh5CG164700 Rh5CG170000 Rh5CG227100
rosa_wichuraiana	Rw1G000740 Rw1G000780 Rw1G000810 Rw1G000840 Rw1G000870 Rw1G000900 Rw5G013560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	563
AccII	CGCG	1 cut(s)	297
AciI	CCGC	6 cut(s)	39, 295, 511, 902, 941, 1375
AcoI	YGGCCR	1 cut(s)	1037
AcsI	RAATTY	1 cut(s)	594
AcuI	CTGAAG	2 cut(s)	1262, 1425
AcvI	CACGTG	1 cut(s)	17
AfaI	GTAC	6 cut(s)	345, 364, 762, 1015, 1168, 1299
AfiI	CCNNNNNNNGG	2 cut(s)	116, 1067
AflII	CTTAAG	1 cut(s)	656
AflIII	ACRYGT	3 cut(s)	14, 16, 1411
AgsI	TTSAA	5 cut(s)	472, 647, 674, 749, 999
AhdI	GACNNNNNGTC	1 cut(s)	715
AjiI	CACGTC	1 cut(s)	1112
AjnI	CCWGG	3 cut(s)	422, 843, 1060
AluBI	AGCT	9 cut(s)	214, 272, 590, 700, 806, 1118, 1228, 1240, 1253
AluI	AGCT	9 cut(s)	214, 272, 590, 700, 806, 1118, 1228, 1240, 1253
Alw21I	GWGCWC	2 cut(s)	690, 1181
Alw26I	GTCTC	4 cut(s)	25, 97, 495, 1347
Alw44I	GTGCAC	1 cut(s)	1177
AlwNI	CAGNNNCTG	2 cut(s)	272, 1283
AoxI	GGCC	1 cut(s)	1037
ApaLI	GTGCAC	1 cut(s)	1177
ApeKI	GCWGC	8 cut(s)	269, 581, 694, 697, 893, 896, 899, 1250
ApoI	RAATTY	1 cut(s)	594
AseI	ATTAAT	1 cut(s)	1307
Asp700I	GAANNNNTTC	2 cut(s)	34, 555
AsuHPI	GGTGA	3 cut(s)	90, 245, 1034
BaeGI	GKGCMC	1 cut(s)	1181
BaeI	ACNNNNGTAYC	2 cut(s)	399, 432
BalI	TGGCCA	1 cut(s)	1039
BanII	GRGCYC	2 cut(s)	266, 1266
BbrPI	CACGTG	1 cut(s)	17
Bbv12I	GWGCWC	2 cut(s)	690, 1181
BbvCI	CCTCAGC	1 cut(s)	378
BbvI	GCAGC	8 cut(s)	281, 568, 706, 709, 880, 883, 886, 1262
BccI	CCATC	7 cut(s)	110, 224, 230, 298, 428, 482, 956
BciT130I	CCWGG	3 cut(s)	424, 845, 1062
BciVI	GTATCC	1 cut(s)	400
BcoDI	GTCTC	4 cut(s)	25, 97, 495, 1347
BfaI	CTAG	1 cut(s)	372
BfmI	CTRYAG	1 cut(s)	585
BfrI	CTTAAG	1 cut(s)	656
BfuI	GTATCC	1 cut(s)	400
BisI	GCNGC	9 cut(s)	270, 512, 582, 695, 698, 894, 897, 900, 1251
BlsI	GCNGC	9 cut(s)	271, 513, 583, 696, 699, 895, 898, 901, 1252
Bme1390I	CCNGG	3 cut(s)	424, 845, 1062
BmeRI	GACNNNNNGTC	1 cut(s)	715
BmgBI	CACGTC	1 cut(s)	1112
BmiI	GGNNCC	1 cut(s)	841
BmrFI	CCNGG	3 cut(s)	424, 845, 1062
BmsI	GCATC	8 cut(s)	301, 409, 456, 640, 886, 946, 1189, 1318
Bpu10I	CCTNAGC	1 cut(s)	378
BpuEI	CTTGAG	2 cut(s)	266, 1250
Bsa29I	ATCGAT	1 cut(s)	486
BsaAI	YACGTR	2 cut(s)	17, 1091
BsaBI	GATNNNNATC	2 cut(s)	168, 240
BsaI	GGTCTC	2 cut(s)	97, 495
BsaJI	CCNNGG	2 cut(s)	843, 844
Bsc4I	CCNNNNNNNGG	2 cut(s)	116, 1067
Bse1I	ACTGG	2 cut(s)	602, 768
Bse3DI	GCAATG	1 cut(s)	1338
Bse8I	GATNNNNATC	2 cut(s)	168, 240
BseBI	CCWGG	3 cut(s)	424, 845, 1062
BseCI	ATCGAT	1 cut(s)	486
BseDI	CCNNGG	2 cut(s)	843, 844
BseGI	GGATG	6 cut(s)	309, 316, 439, 937, 1297, 1426
BseJI	GATNNNNATC	2 cut(s)	168, 240
BseLI	CCNNNNNNNGG	2 cut(s)	116, 1067
BseMI	GCAATG	1 cut(s)	1338
BseMII	CTCAG	3 cut(s)	369, 715, 1215
BseNI	ACTGG	2 cut(s)	602, 768
BseRI	GAGGAG	3 cut(s)	171, 698, 1398
BseSI	GKGCMC	1 cut(s)	1181
BseXI	GCAGC	8 cut(s)	281, 568, 706, 709, 880, 883, 886, 1262
BseYI	CCCAGC	1 cut(s)	265
Bsh1236I	CGCG	1 cut(s)	297
BshFI	GGCC	1 cut(s)	1039
BshVI	ATCGAT	1 cut(s)	486
BsiHKAI	GWGCWC	2 cut(s)	690, 1181
BslFI	GGGAC	1 cut(s)	33
BslI	CCNNNNNNNGG	2 cut(s)	116, 1067
BsmAI	GTCTC	4 cut(s)	25, 97, 495, 1347
BsmFI	GGGAC	1 cut(s)	33
BsnI	GGCC	1 cut(s)	1039
Bso31I	GGTCTC	2 cut(s)	97, 495
Bsp1286I	GDGCHC	4 cut(s)	266, 690, 1181, 1266
Bsp1407I	TGTACA	1 cut(s)	343
Bsp143I	GATC	1 cut(s)	1186
BspACI	CCGC	6 cut(s)	39, 295, 511, 902, 941, 1375
BspANI	GGCC	1 cut(s)	1039
BspCNI	CTCAG	3 cut(s)	370, 714, 1216
BspDI	ATCGAT	1 cut(s)	486
BspFNI	CGCG	1 cut(s)	297
BspHI	TCATGA	2 cut(s)	258, 880
BspLI	GGNNCC	1 cut(s)	841
BspTI	CTTAAG	1 cut(s)	656
BspTNI	GGTCTC	2 cut(s)	97, 495
BsrDI	GCAATG	1 cut(s)	1338
BsrGI	TGTACA	1 cut(s)	343
BsrI	ACTGG	2 cut(s)	602, 768
BssECI	CCNNGG	2 cut(s)	843, 844
BssMI	GATC	1 cut(s)	1186
Bst2UI	CCWGG	3 cut(s)	424, 845, 1062
Bst4CI	ACNGT	5 cut(s)	7, 412, 862, 1081, 1171
Bst6I	CTCTTC	1 cut(s)	100
BstAFI	CTTAAG	1 cut(s)	656
BstAUI	TGTACA	1 cut(s)	343
BstBAI	YACGTR	2 cut(s)	17, 1091
BstC8I	GCNNGC	2 cut(s)	73, 852
BstDEI	CTNAG	3 cut(s)	378, 701, 1224
BstF5I	GGATG	6 cut(s)	309, 316, 439, 937, 1297, 1426
BstFNI	CGCG	1 cut(s)	297
BstKTI	GATC	1 cut(s)	1189
BstMAI	GTCTC	4 cut(s)	25, 97, 495, 1347
BstMBI	GATC	1 cut(s)	1186
BstMWI	GCNNNNNNNGC	5 cut(s)	278, 587, 694, 899, 905
BstNI	CCWGG	3 cut(s)	424, 845, 1062
BstNSI	RCATGY	2 cut(s)	854, 1415
BstSCI	CCNGG	3 cut(s)	422, 843, 1060
BstSFI	CTRYAG	1 cut(s)	585
BstSLI	GKGCMC	1 cut(s)	1181
BstUI	CGCG	1 cut(s)	297
BstV1I	GCAGC	8 cut(s)	281, 568, 706, 709, 880, 883, 886, 1262
BstXI	CCANNNNNNTGG	1 cut(s)	430
Bsu15I	ATCGAT	1 cut(s)	486
BsuI	GTATCC	1 cut(s)	400
BsuRI	GGCC	1 cut(s)	1039
BsuTUI	ATCGAT	1 cut(s)	486
BtrI	CACGTC	1 cut(s)	1112
BtsCI	GGATG	6 cut(s)	309, 316, 439, 937, 1297, 1426
BtsI	GCAGTG	1 cut(s)	611
BtsIMutI	CAGTG	2 cut(s)	12, 611
Cac8I	GCNNGC	2 cut(s)	73, 852
CaiI	CAGNNNCTG	2 cut(s)	272, 1283
CciI	TCATGA	2 cut(s)	258, 880
ClaI	ATCGAT	1 cut(s)	486
Csp6I	GTAC	6 cut(s)	344, 363, 761, 1014, 1167, 1298
CviAII	CATG	8 cut(s)	259, 347, 851, 874, 881, 1196, 1325, 1412
CviQI	GTAC	6 cut(s)	344, 363, 761, 1014, 1167, 1298
DdeI	CTNAG	3 cut(s)	378, 701, 1224
DpnI	GATC	1 cut(s)	1188
DpnII	GATC	1 cut(s)	1186
DraI	TTTAAA	1 cut(s)	1350
DriI	GACNNNNNGTC	1 cut(s)	715
EaeI	YGGCCR	1 cut(s)	1037
Eam1104I	CTCTTC	1 cut(s)	100
Eam1105I	GACNNNNNGTC	1 cut(s)	715
EarI	CTCTTC	1 cut(s)	100
EciI	GGCGGA	1 cut(s)	28
Eco24I	GRGCYC	2 cut(s)	266, 1266
Eco31I	GGTCTC	2 cut(s)	97, 495
Eco32I	GATATC	1 cut(s)	1029
Eco57I	CTGAAG	2 cut(s)	1262, 1425
Eco72I	CACGTG	1 cut(s)	17
EcoRII	CCWGG	3 cut(s)	422, 843, 1060
EcoRV	GATATC	1 cut(s)	1029
EcoT22I	ATGCAT	1 cut(s)	879
EcoT38I	GRGCYC	2 cut(s)	266, 1266
FaeI	CATG	8 cut(s)	262, 350, 854, 877, 884, 1199, 1328, 1415
FalI	AAGNNNNNCTT	2 cut(s)	639, 671
FaqI	GGGAC	1 cut(s)	33
FatI	CATG	8 cut(s)	258, 346, 850, 873, 880, 1195, 1324, 1411
FblI	GTMKAC	1 cut(s)	563
Fnu4HI	GCNGC	9 cut(s)	270, 512, 582, 695, 698, 894, 897, 900, 1251
FokI	GGATG	5 cut(s)	316, 323, 446, 924, 1304
FriOI	GRGCYC	2 cut(s)	266, 1266
Fsp4HI	GCNGC	9 cut(s)	270, 512, 582, 695, 698, 894, 897, 900, 1251
FspBI	CTAG	1 cut(s)	372
GluI	GCNGC	9 cut(s)	270, 512, 582, 695, 698, 894, 897, 900, 1251
GsaI	CCCAGC	1 cut(s)	269
HaeIII	GGCC	1 cut(s)	1039
Hin1II	CATG	8 cut(s)	262, 350, 854, 877, 884, 1199, 1328, 1415
HinfI	GANTC	3 cut(s)	739, 989, 1220
HphI	GGTGA	3 cut(s)	90, 245, 1034
Hpy166II	GTNNAC	2 cut(s)	564, 1179
Hpy188I	TCNGA	2 cut(s)	704, 1225
Hpy188III	TCNNGA	7 cut(s)	173, 245, 259, 647, 881, 1267, 1289
Hpy8I	GTNNAC	2 cut(s)	564, 1179
HpyAV	CCTTC	2 cut(s)	466, 539
HpyCH4III	ACNGT	5 cut(s)	7, 412, 862, 1081, 1171
HpyCH4IV	ACGT	3 cut(s)	16, 1090, 1111
HpyF10VI	GCNNNNNNNGC	5 cut(s)	278, 587, 694, 899, 905
HpyF3I	CTNAG	3 cut(s)	378, 701, 1224
HpySE526I	ACGT	3 cut(s)	16, 1090, 1111
Hsp92II	CATG	8 cut(s)	262, 350, 854, 877, 884, 1199, 1328, 1415
Kzo9I	GATC	1 cut(s)	1186
LmnI	GCTCC	2 cut(s)	685, 1316
Lsp1109I	GCAGC	8 cut(s)	281, 568, 706, 709, 880, 883, 886, 1262
LweI	GCATC	8 cut(s)	301, 409, 456, 640, 886, 946, 1189, 1318
MaeI	CTAG	1 cut(s)	372
MaeII	ACGT	3 cut(s)	16, 1090, 1111
MaeIII	GTNAC	6 cut(s)	10, 637, 676, 826, 977, 1394
MalI	GATC	1 cut(s)	1188
MboI	GATC	1 cut(s)	1186
MboII	GAAGA	4 cut(s)	87, 152, 554, 1418
MfeI	CAATTG	2 cut(s)	1095, 1182
MhlI	GDGCHC	4 cut(s)	266, 690, 1181, 1266
MlsI	TGGCCA	1 cut(s)	1039
MluCI	AATT	6 cut(s)	494, 594, 642, 1095, 1130, 1182
MluNI	TGGCCA	1 cut(s)	1039
MmeI	TCCRAC	1 cut(s)	112
Mox20I	TGGCCA	1 cut(s)	1039
Mph1103I	ATGCAT	1 cut(s)	879
MroXI	GAANNNNTTC	2 cut(s)	34, 555
MscI	TGGCCA	1 cut(s)	1039
MseI	TTAA	4 cut(s)	657, 795, 1307, 1349
MslI	CAYNNNNRTG	1 cut(s)	455
Msp20I	TGGCCA	1 cut(s)	1039
MspA1I	CMGCKG	2 cut(s)	272, 1377
MspCI	CTTAAG	1 cut(s)	656
MspR9I	CCNGG	3 cut(s)	424, 845, 1062
MunI	CAATTG	2 cut(s)	1095, 1182
MvaI	CCWGG	3 cut(s)	424, 845, 1062
MvnI	CGCG	1 cut(s)	297
MwoI	GCNNNNNNNGC	5 cut(s)	278, 587, 694, 899, 905
NdeII	GATC	1 cut(s)	1186
NlaIII	CATG	8 cut(s)	262, 350, 854, 877, 884, 1199, 1328, 1415
NlaIV	GGNNCC	1 cut(s)	841
NmuCI	GTSAC	2 cut(s)	637, 1394
NsiI	ATGCAT	1 cut(s)	879
NspI	RCATGY	2 cut(s)	854, 1415
PaeI	GCATGC	1 cut(s)	854
PagI	TCATGA	2 cut(s)	258, 880
PasI	CCCWGGG	1 cut(s)	844
PciI	ACATGT	1 cut(s)	1411
PdmI	GAANNNNTTC	2 cut(s)	34, 555
PfeI	GAWTC	3 cut(s)	739, 989, 1220
PfoI	TCCNGGA	1 cut(s)	1060
PkrI	GCNGC	9 cut(s)	271, 513, 583, 696, 699, 895, 898, 901, 1252
PmaCI	CACGTG	1 cut(s)	17
PmlI	CACGTG	1 cut(s)	17
Ppu21I	YACGTR	2 cut(s)	17, 1091
PscI	ACATGT	1 cut(s)	1411
PshBI	ATTAAT	1 cut(s)	1307
Psp6I	CCWGG	3 cut(s)	422, 843, 1060
PspCI	CACGTG	1 cut(s)	17
PspFI	CCCAGC	1 cut(s)	265
PspGI	CCWGG	3 cut(s)	422, 843, 1060
PspN4I	GGNNCC	1 cut(s)	841
PstNI	CAGNNNCTG	2 cut(s)	272, 1283
PvuII	CAGCTG	1 cut(s)	272
RsaI	GTAC	6 cut(s)	345, 364, 762, 1015, 1168, 1299
RsaNI	GTAC	6 cut(s)	344, 363, 761, 1014, 1167, 1298
RseI	CAYNNNNRTG	1 cut(s)	455
SaqAI	TTAA	4 cut(s)	657, 795, 1307, 1349
SatI	GCNGC	9 cut(s)	270, 512, 582, 695, 698, 894, 897, 900, 1251
Sau3AI	GATC	1 cut(s)	1186
ScrFI	CCNGG	3 cut(s)	424, 845, 1062
SduI	GDGCHC	4 cut(s)	266, 690, 1181, 1266
SfaNI	GCATC	8 cut(s)	301, 409, 456, 640, 886, 946, 1189, 1318
SfcI	CTRYAG	1 cut(s)	585
SmiI	ATTTAAAT	1 cut(s)	1350
SmiMI	CAYNNNNRTG	1 cut(s)	455
SmlI	CTYRAG	3 cut(s)	245, 656, 1265
SmoI	CTYRAG	3 cut(s)	245, 656, 1265
SphI	GCATGC	1 cut(s)	854
Sse9I	AATT	6 cut(s)	494, 594, 642, 1095, 1130, 1182
SsiI	CCGC	6 cut(s)	39, 295, 511, 902, 941, 1375
SspI	AATATT	1 cut(s)	180
SspMI	CTAG	1 cut(s)	372
StyD4I	CCNGG	3 cut(s)	422, 843, 1060
SwaI	ATTTAAAT	1 cut(s)	1350
TaaI	ACNGT	5 cut(s)	7, 412, 862, 1081, 1171
TaiI	ACGT	3 cut(s)	19, 1093, 1114
TaqI	TCGA	4 cut(s)	352, 486, 1031, 1381
TasI	AATT	6 cut(s)	494, 594, 642, 1095, 1130, 1182
TatI	WGTACW	2 cut(s)	343, 760
TauI	GCSGC	1 cut(s)	514
TfiI	GAWTC	3 cut(s)	739, 989, 1220
Tru1I	TTAA	4 cut(s)	657, 795, 1307, 1349
Tru9I	TTAA	4 cut(s)	657, 795, 1307, 1349
TscAI	CASTG	2 cut(s)	12, 618
TseFI	GTSAC	2 cut(s)	637, 1394
TseI	GCWGC	8 cut(s)	269, 581, 694, 697, 893, 896, 899, 1250
Tsp45I	GTSAC	2 cut(s)	637, 1394
TspDTI	ATGAA	5 cut(s)	197, 247, 555, 559, 1308
TspGWI	ACGGA	1 cut(s)	46
TspRI	CASTG	2 cut(s)	12, 618
Vha464I	CTTAAG	1 cut(s)	656
VneI	GTGCAC	1 cut(s)	1177
VspI	ATTAAT	1 cut(s)	1307
XapI	RAATTY	1 cut(s)	594
XceI	RCATGY	2 cut(s)	854, 1415
XcmI	CCANNNNNNNNNTGG	3 cut(s)	58, 720, 851
XmiI	GTMKAC	1 cut(s)	563
XmnI	GAANNNNTTC	2 cut(s)	34, 555
XspI	CTAG	1 cut(s)	372
Zsp2I	ATGCAT	1 cut(s)	879

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.