Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0000685

Physical Location & Seq

Genomic Coordinates Forward (+)

2013486 .. 2054222

Gene Structure 40737 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG013200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGACAGTTGTTACACGTGTCTCCCAGAGAACCCATTCCGCCATTAGTCCCACCTCCGTTTTGGCTCTGGCTTGCCCTTTCTTGCTTCTGGAAATATTGAGAGATGAAGCTGTGGCAAGACTTCATCAGTTTGGAAAGGTAAGTGATGGTGATGGTTATCTTGAGAGGATATTCATGAGCCCAGCAGCTGTGAGGGCTGGAAATCTTATCCGCGAATGGATGGAGGATACTGGTTTGAGAACGTGGGTTGATTGCTTGGGAAATGTACATGGTCGAGTTGAGGGTACAAATGCTAGTGCTGAGGTTCTAATACTTGGTTCTCATTTGGATACTGTTTTGAGTATCGATGGAAAATTGGGAGAACTAAAGCGGCCGGTTGAGGTAATAGCATTTAGTGATGAAGAAGGAGTAAGGTTTCAGTCTACATTCATAGGAAGTGCTGCTATAGCTGGAATTTTACCAGTTTCAGCACTGCAAATAACTGATAAAAGTGGTGTGACAATTCAAGATGCTCTTAAGAAAAACTCCATTGAAGTTACAGAGGAGCACTTGCAGCAGCTCAGATATGATCCAAAGTCAGTTTGGGGTTATGTTGAGATTCACATTGAACAAGGGCCTGTACTGGAATGGGTTGGTTTTCCTCTAGGAGTTGTTAAAGGCATAGCTGGACAGACAAGACTAAAGGTTACAATGAGAGGTTCCCAGGGGCATGCTGGAACAGTTCCAATGTCCATGCGTCATGACCCTATGGCTGCTGCTGCAGAAGCCATTGTATTGTTAGAAAGCCTATGTAAGCATCCTCAAGATTTTCTGTCTTTTGATGGTCAATGCAAAAGTTACTCATTAGAATCACTTTCAACTTCACTCGTTTGTACCGTTGGTGAGATATCGACTTGGCCAAGTGCAAGTAATGTTATTCCAGGACAGGTAACATTCACAGTAGATTTACGTGCAATTGATGACATGGGACGTGAAGCTGTTGTATGTGAATTATCCAACCGATTGTATCAAATATGTGATAGGCGTTCAGTTTCGTGCACAATTGATCGTAAGCATGATGCAAATGCAGTCATTTGCGATTCTGAGCTGACTTCGAAGCTGAAGTCAGCAGCTTATCTTGGGCTCAAGAGAATGACAGGTTCTGTTCAGGATGAAGTACCTGTATTAATGAGTGGAGCAGGACATGATGCAATCGCTCTGTCTCATTTAACTAAGGTGGGTATGCTTTTTGTCCGCTGTCGAGGAGGCATAAGTCACTTCCCTGAAGAACATGTATTGGATGATATGATGTTTGGGCATCTGGTTTGGCAATCCTGGCATTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000255 GO:0000256 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006139 GO:0006144 GO:0006145 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009112 GO:0009987 GO:0010135 GO:0010136 GO:0012505 GO:0016787 GO:0016810 GO:0016813 GO:0017144 GO:0019439 GO:0034641 GO:0042737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043605 GO:0044237 GO:0044238 GO:0044248 GO:0044270 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046113 GO:0046483 GO:0046700 GO:0047652 GO:0055086 GO:0071704 GO:0072521 GO:0072523 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00230 ko01120 map00230 map01120

Pfam Domains

Protein Families

M20_dimer Peptidase_M20 Peptidase_M28

Protein Analysis

441

Amino Acids

48.11

Weight (kDa)

5.73

Isoelectric Point (pI)

38.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M20	PF01546	91 - 428	2.6e-10	Peptidase family M20/M25/M40
M20_dimer	PF07687	223 - 335	1.7e-07	Peptidase dimerisation domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000685)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G20070 AT4G20070
fragaria_vesca	FvH4_3g12850 FvH4_3g12850 FvH4_3g12850
malus_domestica	MD10G1228200.v1.1
prunus_persica	Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1 Prupe.4G116700_v2.0.a1
pyrus_communis	pycom10g19170
rosa_chinensis	RchiOBHm_Chr1g0315031 RchiOBHm_Chr1g0315061 RchiOBHm_Chr1g0315091 RchiOBHm_Chr1g0315141 RchiOBHm_Chr1g0315151 RchiOBHm_Chr1g0315201 RchiOBHm_Chr1g0315231 RchiOBHm_Chr1g0315241 RchiOBHm_Chr1g0315311 RchiOBHm_Chr1g0315381 RchiOBHm_Chr1g0315441 RchiOBHm_Chr1g0315471 RchiOBHm_Chr1g0315531 RchiOBHm_Chr1g0315541 RchiOBHm_Chr1g0315581 RchiOBHm_Chr1g0315591 RchiOBHm_Chr1g0315611 RchiOBHm_Chr5g0020791 RchiOBHm_Chr5g0020891 RchiOBHm_Chr5g0021441 RchiOBHm_Chr5g0021511 RchiOBHm_Chr5g0021521 RchiOBHm_Chr5g0029451 RchiOBHm_Chr5g0029471
rosa_laevigata	RLG00000030744 RLG00000030748 RLG00000032563 RLG00000032611
rosa_multiflora	Rmu_sc0000576.1_g000021 Rmu_sc0002052.1_g000003 Rmu_sc0004180.1_g000017 Rmu_sc0004180.1_g000030 Rmu_sc0004180.1_g000035 Rmu_sc0023070.1_g000002 Rmu_ssc0000244.1_g000002
rosa_roxburghii	Rroxscaffold_1G00057130 Rroxscaffold_1G00057510 Rroxscaffold_4G00331580
rosa_rugosa	Rorug01G0004300 Rorug05G0063000 Rorug05G0067300
rosa_samantha	Rh1AG015000 Rh1AG015600 Rh1BG007400 Rh1BG007800 Rh1CG013200 Rh5AG152900 Rh5BG152700 Rh5BG155800 Rh5CG164200 Rh5CG164700 Rh5CG170000 Rh5CG227100
rosa_wichuraiana	Rw1G000740 Rw1G000780 Rw1G000810 Rw1G000840 Rw1G000870 Rw1G000900 Rw5G013560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	422
AccII	CGCG	1 cut(s)	213
AciI	CCGC	4 cut(s)	39, 211, 370, 1234
AclWI	GGATC	1 cut(s)	563
AcoI	YGGCCR	2 cut(s)	371, 896
AcsI	RAATTY	1 cut(s)	453
AcuI	CTGAAG	2 cut(s)	1121, 1284
AcvI	CACGTG	1 cut(s)	17
AfaI	GTAC	5 cut(s)	267, 286, 621, 874, 1158
AflII	CTTAAG	1 cut(s)	515
AflIII	ACRYGT	3 cut(s)	14, 16, 1270
AgsI	TTSAA	4 cut(s)	506, 533, 608, 858
AjiI	CACGTC	1 cut(s)	971
AjnI	CCWGG	3 cut(s)	702, 919, 1313
AluBI	AGCT	9 cut(s)	110, 188, 449, 559, 665, 977, 1087, 1099, 1112
AluI	AGCT	9 cut(s)	110, 188, 449, 559, 665, 977, 1087, 1099, 1112
Alw21I	GWGCWC	2 cut(s)	549, 1040
Alw26I	GTCTC	2 cut(s)	25, 1206
Alw44I	GTGCAC	1 cut(s)	1036
AlwI	GGATC	1 cut(s)	563
AlwNI	CAGNNNCTG	2 cut(s)	188, 1142
AoxI	GGCC	3 cut(s)	371, 614, 896
ApaLI	GTGCAC	1 cut(s)	1036
ApeKI	GCWGC	8 cut(s)	185, 440, 553, 556, 752, 755, 758, 1109
ApoI	RAATTY	1 cut(s)	453
ArsI	GACNNNNNNTTYG	2 cut(s)	1088, 1120
AseI	ATTAAT	1 cut(s)	1166
Asp700I	GAANNNNTTC	1 cut(s)	34
AspS9I	GGNCC	1 cut(s)	614
AsuHPI	GGTGA	2 cut(s)	161, 893
AsuII	TTCGAA	1 cut(s)	1094
BaeGI	GKGCMC	1 cut(s)	1040
BalI	TGGCCA	1 cut(s)	898
BanII	GRGCYC	2 cut(s)	182, 1125
BbrPI	CACGTG	1 cut(s)	17
Bbv12I	GWGCWC	2 cut(s)	549, 1040
BbvCI	CCTCAGC	1 cut(s)	300
BbvI	GCAGC	8 cut(s)	197, 427, 565, 568, 739, 742, 745, 1121
BccI	CCATC	5 cut(s)	140, 146, 214, 341, 815
BciT130I	CCWGG	3 cut(s)	704, 921, 1315
BciVI	GTATCC	2 cut(s)	220, 322
BcoDI	GTCTC	2 cut(s)	25, 1206
BfaI	CTAG	2 cut(s)	294, 644
BfmI	CTRYAG	2 cut(s)	444, 759
BfrI	CTTAAG	1 cut(s)	515
BfuI	GTATCC	2 cut(s)	220, 322
BisI	GCNGC	9 cut(s)	186, 371, 441, 554, 557, 753, 756, 759, 1110
BlsI	GCNGC	9 cut(s)	187, 372, 442, 555, 558, 754, 757, 760, 1111
Bme1390I	CCNGG	3 cut(s)	704, 921, 1315
BmgBI	CACGTC	1 cut(s)	971
BmgT120I	GGNCC	1 cut(s)	614
BmiI	GGNNCC	1 cut(s)	700
BmrFI	CCNGG	3 cut(s)	704, 921, 1315
BmsI	GCATC	5 cut(s)	499, 805, 1048, 1177, 1306
Bpu10I	CCTNAGC	1 cut(s)	300
Bpu14I	TTCGAA	1 cut(s)	1094
BpuEI	CTTGAG	3 cut(s)	182, 786, 1109
Bsa29I	ATCGAT	1 cut(s)	345
BsaAI	YACGTR	2 cut(s)	17, 950
BsaBI	GATNNNNATC	1 cut(s)	156
BsaJI	CCNNGG	2 cut(s)	702, 703
Bse118I	RCCGGY	1 cut(s)	373
Bse1I	ACTGG	3 cut(s)	235, 461, 627
Bse8I	GATNNNNATC	1 cut(s)	156
BseBI	CCWGG	3 cut(s)	704, 921, 1315
BseCI	ATCGAT	1 cut(s)	345
BseDI	CCNNGG	2 cut(s)	702, 703
BseGI	GGATG	4 cut(s)	225, 796, 1156, 1285
BseJI	GATNNNNATC	1 cut(s)	156
BseMII	CTCAG	3 cut(s)	291, 574, 1074
BseNI	ACTGG	3 cut(s)	235, 461, 627
BseRI	GAGGAG	2 cut(s)	557, 1257
BseSI	GKGCMC	1 cut(s)	1040
BseX3I	CGGCCG	1 cut(s)	371
BseXI	GCAGC	8 cut(s)	197, 427, 565, 568, 739, 742, 745, 1121
BseYI	CCCAGC	1 cut(s)	181
Bsh1236I	CGCG	1 cut(s)	213
Bsh1285I	CGRYCG	1 cut(s)	374
BshFI	GGCC	3 cut(s)	373, 616, 898
BshVI	ATCGAT	1 cut(s)	345
BsiEI	CGRYCG	1 cut(s)	374
BsiHKAI	GWGCWC	2 cut(s)	549, 1040
BsiSI	CCGG	1 cut(s)	374
BslFI	GGGAC	2 cut(s)	33, 981
BsmAI	GTCTC	2 cut(s)	25, 1206
BsmFI	GGGAC	2 cut(s)	33, 981
BsmI	GAATGC	1 cut(s)	1318
BsnI	GGCC	3 cut(s)	373, 616, 898
Bsp119I	TTCGAA	1 cut(s)	1094
Bsp1286I	GDGCHC	4 cut(s)	182, 549, 1040, 1125
Bsp1407I	TGTACA	1 cut(s)	265
Bsp143I	GATC	2 cut(s)	568, 1045
BspACI	CCGC	4 cut(s)	39, 211, 370, 1234
BspANI	GGCC	3 cut(s)	373, 616, 898
BspCNI	CTCAG	3 cut(s)	292, 573, 1075
BspDI	ATCGAT	1 cut(s)	345
BspFNI	CGCG	1 cut(s)	213
BspHI	TCATGA	2 cut(s)	174, 739
BspLI	GGNNCC	1 cut(s)	700
BspMAI	CTGCAG	1 cut(s)	763
BspPI	GGATC	1 cut(s)	563
BspT104I	TTCGAA	1 cut(s)	1094
BspTI	CTTAAG	1 cut(s)	515
BsrFI	RCCGGY	1 cut(s)	373
BsrGI	TGTACA	1 cut(s)	265
BsrI	ACTGG	3 cut(s)	235, 461, 627
BssAI	RCCGGY	1 cut(s)	373
BssECI	CCNNGG	2 cut(s)	702, 703
BssMI	GATC	2 cut(s)	568, 1045
Bst2UI	CCWGG	3 cut(s)	704, 921, 1315
Bst4CI	ACNGT	5 cut(s)	7, 334, 721, 877, 940
BstAFI	CTTAAG	1 cut(s)	515
BstAUI	TGTACA	1 cut(s)	265
BstBAI	YACGTR	2 cut(s)	17, 950
BstBI	TTCGAA	1 cut(s)	1094
BstC8I	GCNNGC	2 cut(s)	73, 711
BstDEI	CTNAG	4 cut(s)	300, 560, 1083, 1212
BstF5I	GGATG	4 cut(s)	225, 796, 1156, 1285
BstFNI	CGCG	1 cut(s)	213
BstKTI	GATC	2 cut(s)	571, 1048
BstMAI	GTCTC	2 cut(s)	25, 1206
BstMBI	GATC	2 cut(s)	568, 1045
BstMCI	CGRYCG	1 cut(s)	374
BstMWI	GCNNNNNNNGC	6 cut(s)	194, 446, 553, 758, 764, 1315
BstNI	CCWGG	3 cut(s)	704, 921, 1315
BstNSI	RCATGY	2 cut(s)	713, 1274
BstSCI	CCNGG	3 cut(s)	702, 919, 1313
BstSFI	CTRYAG	2 cut(s)	444, 759
BstSLI	GKGCMC	1 cut(s)	1040
BstUI	CGCG	1 cut(s)	213
BstV1I	GCAGC	8 cut(s)	197, 427, 565, 568, 739, 742, 745, 1121
BstZI	CGGCCG	1 cut(s)	371
Bsu15I	ATCGAT	1 cut(s)	345
BsuI	GTATCC	2 cut(s)	220, 322
BsuRI	GGCC	3 cut(s)	373, 616, 898
BsuTUI	ATCGAT	1 cut(s)	345
BtrI	CACGTC	1 cut(s)	971
BtsCI	GGATG	4 cut(s)	225, 796, 1156, 1285
BtsI	GCAGTG	1 cut(s)	470
BtsIMutI	CAGTG	1 cut(s)	470
Cac8I	GCNNGC	2 cut(s)	73, 711
CaiI	CAGNNNCTG	2 cut(s)	188, 1142
CciI	TCATGA	2 cut(s)	174, 739
Cfr10I	RCCGGY	1 cut(s)	373
Cfr13I	GGNCC	1 cut(s)	614
ClaI	ATCGAT	1 cut(s)	345
CseI	GACGC	1 cut(s)	725
Csp6I	GTAC	5 cut(s)	266, 285, 620, 873, 1157
CviAII	CATG	9 cut(s)	175, 269, 710, 733, 740, 964, 1055, 1184, 1271
CviQI	GTAC	5 cut(s)	266, 285, 620, 873, 1157
DdeI	CTNAG	4 cut(s)	300, 560, 1083, 1212
DpnI	GATC	2 cut(s)	570, 1047
DpnII	GATC	2 cut(s)	568, 1045
EaeI	YGGCCR	2 cut(s)	371, 896
EagI	CGGCCG	1 cut(s)	371
EciI	GGCGGA	1 cut(s)	28
EclXI	CGGCCG	1 cut(s)	371
Eco24I	GRGCYC	2 cut(s)	182, 1125
Eco32I	GATATC	1 cut(s)	888
Eco52I	CGGCCG	1 cut(s)	371
Eco57I	CTGAAG	2 cut(s)	1121, 1284
Eco72I	CACGTG	1 cut(s)	17
EcoO109I	RGGNCCY	1 cut(s)	614
EcoRII	CCWGG	3 cut(s)	702, 919, 1313
EcoRV	GATATC	1 cut(s)	888
EcoT38I	GRGCYC	2 cut(s)	182, 1125
FaeI	CATG	9 cut(s)	178, 272, 713, 736, 743, 967, 1058, 1187, 1274
FalI	AAGNNNNNCTT	2 cut(s)	498, 530
FaqI	GGGAC	2 cut(s)	33, 981
FatI	CATG	9 cut(s)	174, 268, 709, 732, 739, 963, 1054, 1183, 1270
FblI	GTMKAC	1 cut(s)	422
Fnu4HI	GCNGC	9 cut(s)	186, 371, 441, 554, 557, 753, 756, 759, 1110
FokI	GGATG	4 cut(s)	232, 783, 1163, 1292
FriOI	GRGCYC	2 cut(s)	182, 1125
Fsp4HI	GCNGC	9 cut(s)	186, 371, 441, 554, 557, 753, 756, 759, 1110
FspBI	CTAG	2 cut(s)	294, 644
GluI	GCNGC	9 cut(s)	186, 371, 441, 554, 557, 753, 756, 759, 1110
GsaI	CCCAGC	1 cut(s)	185
HaeIII	GGCC	3 cut(s)	373, 616, 898
HapII	CCGG	1 cut(s)	374
HgaI	GACGC	1 cut(s)	725
Hin1II	CATG	9 cut(s)	178, 272, 713, 736, 743, 967, 1058, 1187, 1274
HinfI	GANTC	3 cut(s)	598, 848, 1079
HpaII	CCGG	1 cut(s)	374
HphI	GGTGA	2 cut(s)	161, 893
Hpy166II	GTNNAC	2 cut(s)	423, 1038
Hpy188I	TCNGA	2 cut(s)	563, 1084
Hpy188III	TCNNGA	8 cut(s)	89, 161, 175, 506, 740, 803, 1126, 1148
Hpy8I	GTNNAC	2 cut(s)	423, 1038
HpyAV	CCTTC	1 cut(s)	398
HpyCH4III	ACNGT	5 cut(s)	7, 334, 721, 877, 940
HpyCH4IV	ACGT	4 cut(s)	16, 242, 949, 970
HpyF10VI	GCNNNNNNNGC	6 cut(s)	194, 446, 553, 758, 764, 1315
HpyF3I	CTNAG	4 cut(s)	300, 560, 1083, 1212
HpySE526I	ACGT	4 cut(s)	16, 242, 949, 970
Hsp92II	CATG	9 cut(s)	178, 272, 713, 736, 743, 967, 1058, 1187, 1274
Kzo9I	GATC	2 cut(s)	568, 1045
LmnI	GCTCC	2 cut(s)	544, 1175
Lsp1109I	GCAGC	8 cut(s)	197, 427, 565, 568, 739, 742, 745, 1121
LweI	GCATC	5 cut(s)	499, 805, 1048, 1177, 1306
MaeI	CTAG	2 cut(s)	294, 644
MaeII	ACGT	4 cut(s)	16, 242, 949, 970
MaeIII	GTNAC	7 cut(s)	10, 496, 535, 685, 836, 928, 1253
MalI	GATC	2 cut(s)	570, 1047
MboI	GATC	2 cut(s)	568, 1045
MboII	GAAGA	2 cut(s)	413, 1277
MfeI	CAATTG	2 cut(s)	954, 1041
MhlI	GDGCHC	4 cut(s)	182, 549, 1040, 1125
MlsI	TGGCCA	1 cut(s)	898
MluCI	AATT	6 cut(s)	353, 453, 501, 954, 989, 1041
MluNI	TGGCCA	1 cut(s)	898
MmeI	TCCRAC	1 cut(s)	1020
Mox20I	TGGCCA	1 cut(s)	898
MroXI	GAANNNNTTC	1 cut(s)	34
MscI	TGGCCA	1 cut(s)	898
MseI	TTAA	4 cut(s)	516, 654, 1166, 1208
Msp20I	TGGCCA	1 cut(s)	898
MspA1I	CMGCKG	2 cut(s)	188, 1236
MspCI	CTTAAG	1 cut(s)	515
MspI	CCGG	1 cut(s)	374
MspR9I	CCNGG	3 cut(s)	704, 921, 1315
MunI	CAATTG	2 cut(s)	954, 1041
Mva1269I	GAATGC	1 cut(s)	1318
MvaI	CCWGG	3 cut(s)	704, 921, 1315
MvnI	CGCG	1 cut(s)	213
MwoI	GCNNNNNNNGC	6 cut(s)	194, 446, 553, 758, 764, 1315
NdeII	GATC	2 cut(s)	568, 1045
NlaIII	CATG	9 cut(s)	178, 272, 713, 736, 743, 967, 1058, 1187, 1274
NlaIV	GGNNCC	1 cut(s)	700
NmuCI	GTSAC	2 cut(s)	496, 1253
NspI	RCATGY	2 cut(s)	713, 1274
NspV	TTCGAA	1 cut(s)	1094
PaeI	GCATGC	1 cut(s)	713
PagI	TCATGA	2 cut(s)	174, 739
PasI	CCCWGGG	1 cut(s)	703
PciI	ACATGT	1 cut(s)	1270
PcsI	WCGNNNNNNNCGW	1 cut(s)	873
PctI	GAATGC	1 cut(s)	1318
PdmI	GAANNNNTTC	1 cut(s)	34
PfeI	GAWTC	3 cut(s)	598, 848, 1079
PfoI	TCCNGGA	1 cut(s)	919
PkrI	GCNGC	9 cut(s)	187, 372, 442, 555, 558, 754, 757, 760, 1111
PmaCI	CACGTG	1 cut(s)	17
PmlI	CACGTG	1 cut(s)	17
Ppu21I	YACGTR	2 cut(s)	17, 950
PscI	ACATGT	1 cut(s)	1270
PshBI	ATTAAT	1 cut(s)	1166
Psp6I	CCWGG	3 cut(s)	702, 919, 1313
PspCI	CACGTG	1 cut(s)	17
PspFI	CCCAGC	1 cut(s)	181
PspGI	CCWGG	3 cut(s)	702, 919, 1313
PspN4I	GGNNCC	1 cut(s)	700
PspPI	GGNCC	1 cut(s)	614
PstI	CTGCAG	1 cut(s)	763
PstNI	CAGNNNCTG	2 cut(s)	188, 1142
PvuII	CAGCTG	1 cut(s)	188
RsaI	GTAC	5 cut(s)	267, 286, 621, 874, 1158
RsaNI	GTAC	5 cut(s)	266, 285, 620, 873, 1157
SaqAI	TTAA	4 cut(s)	516, 654, 1166, 1208
SatI	GCNGC	9 cut(s)	186, 371, 441, 554, 557, 753, 756, 759, 1110
Sau3AI	GATC	2 cut(s)	568, 1045
Sau96I	GGNCC	1 cut(s)	614
ScrFI	CCNGG	3 cut(s)	704, 921, 1315
SduI	GDGCHC	4 cut(s)	182, 549, 1040, 1125
SfaNI	GCATC	5 cut(s)	499, 805, 1048, 1177, 1306
SfcI	CTRYAG	2 cut(s)	444, 759
SfuI	TTCGAA	1 cut(s)	1094
SmlI	CTYRAG	4 cut(s)	161, 515, 801, 1124
SmoI	CTYRAG	4 cut(s)	161, 515, 801, 1124
SphI	GCATGC	1 cut(s)	713
Sse9I	AATT	6 cut(s)	353, 453, 501, 954, 989, 1041
SsiI	CCGC	4 cut(s)	39, 211, 370, 1234
SspI	AATATT	1 cut(s)	96
SspMI	CTAG	2 cut(s)	294, 644
StyD4I	CCNGG	3 cut(s)	702, 919, 1313
TaaI	ACNGT	5 cut(s)	7, 334, 721, 877, 940
TaiI	ACGT	4 cut(s)	19, 245, 952, 973
TaqI	TCGA	5 cut(s)	274, 345, 890, 1094, 1240
TasI	AATT	6 cut(s)	353, 453, 501, 954, 989, 1041
TatI	WGTACW	2 cut(s)	265, 619
TauI	GCSGC	1 cut(s)	373
TfiI	GAWTC	3 cut(s)	598, 848, 1079
Tru1I	TTAA	4 cut(s)	516, 654, 1166, 1208
Tru9I	TTAA	4 cut(s)	516, 654, 1166, 1208
TscAI	CASTG	1 cut(s)	477
TseFI	GTSAC	2 cut(s)	496, 1253
TseI	GCWGC	8 cut(s)	185, 440, 553, 556, 752, 755, 758, 1109
Tsp45I	GTSAC	2 cut(s)	496, 1253
TspDTI	ATGAA	7 cut(s)	113, 120, 163, 414, 418, 1167, 1311
TspGWI	ACGGA	1 cut(s)	46
TspRI	CASTG	1 cut(s)	477
Vha464I	CTTAAG	1 cut(s)	515
VneI	GTGCAC	1 cut(s)	1036
VspI	ATTAAT	1 cut(s)	1166
XapI	RAATTY	1 cut(s)	453
XceI	RCATGY	2 cut(s)	713, 1274
XcmI	CCANNNNNNNNNTGG	3 cut(s)	58, 579, 710
XmiI	GTMKAC	1 cut(s)	422
XmnI	GAANNNNTTC	1 cut(s)	34
XspI	CTAG	2 cut(s)	294, 644

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.