Rroxscaffold_4G00330300

NmrA-like family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000709
Physical Location & Seq
Forward (+)
63894533 .. 63902986
8454 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00330300.1

Sequence Viewer

Length: 1890 bp
ATGAGTGGAGCAAGGAAAGTTGCTGTGTGTGTAACTGGAGCGTCTGGTTATATTGCATCATGGCTGGTCAAGCTTTTGTTAGGACGAGGTTATATTGTCAAAGCCACTGTTCGGGACCCAAACAATCTGAAGAAAACAGAACACTTGCTTTCACTCGATGGAGCAAAAGAAAGGCTTCATTTGTTCAAAGCAGATTTGCTAGATGAAGGATCTTTTGACCCTGTGGTTGATGGATGTGACAGTGTTTTCCATACAGCATCTCCAGTACTATTTTCATCGATCAGCAACCCACAGGCAGAACTAATTGACCCTGCTGTGAAGGGAACGCTAAATGTTCTGAAATCATGCAAAAAATTTCCAACTGTCAAGCGAGTGGTTTTGACATCTTCTATGGCTTCAGTAATGATGAATGGAAAACCTCTGACCCCTAATGTTGTGGTGGATGAAACATGGTATTCAGATCCACTTATTGCTGAGAAGCACAAGGTGAGTAGGTTCCTGGTTTCACCTTTTCTATGGTATCTTCTTTCAAAGACTTTAGCTGAGGAGGCTGCTTGGAAATTTGCTGAAGGAAATGGGATTGACTTGGTTTCAATAAATCTGGGGTTTGTGATAGGACCACTCTTACAGCCGACAATTAATTTGACTGTGGAGATGATTCAGAATCTCATAACTGGCAAGGAAGTGCCCGCTTCAAATTATAGATTGATTGATGTTAGAGATGTTGCCTTGGCTCATATTCAAGCATTTGAAGTTCCTTCAGCTACAGGAAGGTATTGTTTGGTCAGCCATGCTGCACACATTTCTGAGGTTCTAGAGATTATACAACAACTTTATCCCACTTTGCACATTCCTGAAAGATGTGAGGATGACAATCCTCTTTTGCTTCCTTCTGACCCACAGTTTCAAGTATCCAAGGAGAAGGCAAAAGGAGCATCTGGTTATATTGCATCATGGCTGGTCAAGCTTTTGCTACAACGTGGTTATATTGTTAAAGGCACTGTTCGGGACCCAAACGATCCCAAAAAAACAGAACACTTACTTTCACTTGAGGGGGCAAAAGAAAGGCTTCATTTGTTCAAAGCAGATTTGCTAGATGAAGGATCTTTTGACCCTGCAGTTGATGGATGTGACTGTGTTTTTCATACCGCATCTCCGGATCATAATTCTCGGCGTCTAGAATGCAATGAGCATTTGTCTCCATATCTTCAGGCAGAACTAATTGACCCTGCTGTGAAGGGAACATTAAATGTTCTGAAATCATGTGCAAAATTTCCAACCGTCAAGCGAGTGGTTTTGACATCTTCTTTGGCTTCAGTAATGATGAATGGAAAACCTCTGACCCCTGATGTTGTAGTGGATGAAACATGGTATTCAGATCCACTAATTGCTGAGAAGCACAAGCTGTGGTATATTCTTTCAAAAACTTTAGCTGAGGAGGCTGCTTGGAAATTTGCTGAAGGAAATAGGATTGACTTGGTTTCAATAAATCCGGGGTTTGTGATTGGACCACTCTTACAGCCGACAATTAATTTGACGGTGGAGATGATTCAGAACCTCATAACTGGCAAGGCAGTGCCCGCTTCAAATTACAGATTTATTGATGTTAGAGATGTTGCCGCTGCACATATTCAAGCATTTGAAATTCTTTCAGCTAGTGGAAGGTATTGTTTGGTCAGCCATGTTGCAAATATTTCCGAGACTCTAGAGATGATACGACAACTTTATCCCACCATGTACATTCCTGAAAGATGTGAGGATCCTTCTGGCCCACAGTTTCAAGTATCCAAGGAGAAAGCAAAAAGTCTGGGAATTAGTTTTCATCCATTGGAAGTAACTCTGAAGGACACTATTGAAAGCCTGAAGGAGAAGGGTTTCCTCAACATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Epimerase

Protein Analysis

629

Amino Acids

69.44

Weight (kDa)

6.21

Isoelectric Point (pI)

30.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NmrA PF05368 8 - 106 9.4e-08 NmrA-like family
Epimerase PF01370 9 - 255 9.8e-20 NAD dependent epimerase/dehydratase family
3Beta_HSD PF01073 11 - 155 1.7e-12 3-beta hydroxysteroid dehydrogenase/isomerase family
GDP_Man_Dehyd PF16363 11 - 130 4.1e-12 GDP-mannose 4,6 dehydratase
NAD_binding_4 PF07993 11 - 210 2.4e-09 Male sterility protein
NAD_binding_10 PF13460 13 - 134 3.9e-10 NAD(P)H-binding
Epimerase PF01370 311 - 548 3e-18 NAD dependent epimerase/dehydratase family
3Beta_HSD PF01073 311 - 552 3e-14 3-beta hydroxysteroid dehydrogenase/isomerase family
NAD_binding_10 PF13460 311 - 439 9.5e-10 NAD(P)H-binding
GDP_Man_Dehyd PF16363 311 - 435 1e-07 GDP-mannose 4,6 dehydratase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000709)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g01511 FvH4_7g01511 FvH4_7g01511 FvH4_7g01520 FvH4_7g01520 FvH4_7g01520 FvH4_7g01520 FvH4_7g01560 FvH4_7g01560
malus_domestica MD02G1303400.v1.1 MD02G1303800.v1.1 MD02G1303900.v1.1 MD02G1304200.v1.1 MD02G1304400.v1.1 MD02G1304900.v1.1 MD02G1305300.v1.1 MD02G1305400.v1.1 MD04G1006100.v1.1 MD07G1020300.v1.1 MD07G1020900.v1.1 MD07G1021200.v1.1 MD07G1021500.v1.1
prunus_persica Prupe.2G020700_v2.0.a1 Prupe.2G021000_v2.0.a1 Prupe.2G021100_v2.0.a1 Prupe.2G021300_v2.0.a1 Prupe.2G021300_v2.0.a1 Prupe.2G021500_v2.0.a1 Prupe.2G021500_v2.0.a1 Prupe.2G021500_v2.0.a1
pyrus_communis pycom02g25550 pycom02g25560 pycom02g25570 pycom02g25590 pycom07g01560 pycom07g01570 pycom07g01630
rosa_chinensis RchiOBHm_Chr1g0317371 RchiOBHm_Chr1g0317421 RchiOBHm_Chr1g0317441 RchiOBHm_Chr1g0317501 RchiOBHm_Chr1g0317581 RchiOBHm_Chr1g0317591
rosa_laevigata RLG00000030523 RLG00000030595 RLG00000030598
rosa_multiflora Rmu_sc0001403.1_g000012 Rmu_sc0001403.1_g000037 Rmu_sc0003374.1_g000001 Rmu_sc0003374.1_g000006 Rmu_sc0009583.1_g000010
rosa_roxburghii Rroxscaffold_4G00330280 Rroxscaffold_4G00330300 Rroxscaffold_4G00330420 Rroxscaffold_4G00330450
rosa_rugosa Rorug01G0016100 Rorug01G0016200 Rorug01G0016200 Rorug01G0016300 Rorug01G0016400
rosa_samantha Rh1BG023400 Rh1BG023800 Rh1BG024400 Rh1DG044600 Rh1DG044900 Rh1DG045100 Rh1DG045200 Rh1DG045400 Rh1DG045600
rosa_wichuraiana Rw0G002050 Rw1G001940 Rw1G001950 Rw1G002000 Rw1G002030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 1156
AciI CCGC 4 cut(s) 690, 1149, 1581, 1620
AclWI GGATC 8 cut(s) 217, 455, 1013, 1111, 1167, 1373, 1754, 1767
AcsI RAATTY 5 cut(s) 353, 560, 1271, 1451, 1644
AcuI CTGAAG 9 cut(s) 149, 381, 588, 744, 1193, 1299, 1479, 1862, 1883
AcyI GRCGYC 1 cut(s) 1174
AdeI CACNNNGTG 1 cut(s) 487
AfaI GTAC 2 cut(s) 267, 1739
AfiI CCNNNNNNNGG 1 cut(s) 111
AjnI CCWGG 1 cut(s) 498
AluBI AGCT 7 cut(s) 73, 542, 764, 967, 1405, 1433, 1655
AluI AGCT 7 cut(s) 73, 542, 764, 967, 1405, 1433, 1655
Alw26I GTCTC 2 cut(s) 1203, 1694
AlwI GGATC 8 cut(s) 217, 455, 1013, 1111, 1167, 1373, 1754, 1767
Aor13HI TCCGGA 1 cut(s) 1156
AoxI GGCC 1 cut(s) 1768
ApeKI GCWGC 4 cut(s) 551, 794, 1442, 1622
ApoI RAATTY 5 cut(s) 353, 560, 1271, 1451, 1644
ArsI GACNNNNNNTTYG 6 cut(s) 625, 657, 1291, 1323, 1516, 1548
AseI ATTAAT 2 cut(s) 639, 1530
Asp700I GAANNNNTTC 3 cut(s) 174, 1068, 1874
AspS9I GGNCC 5 cut(s) 115, 617, 1009, 1508, 1769
AsuC2I CCSGG 1 cut(s) 1494
AsuHPI GGTGA 2 cut(s) 498, 499
AvaII GGWCC 4 cut(s) 115, 617, 1009, 1508
BaeGI GKGCMC 2 cut(s) 690, 1581
BamHI GGATCC 1 cut(s) 1759
BbvCI CCTCAGC 2 cut(s) 543, 1434
BbvI GCAGC 4 cut(s) 538, 781, 1429, 1609
BccI CCATC 3 cut(s) 152, 224, 1118
BciT130I CCWGG 1 cut(s) 500
BciVI GTATCC 2 cut(s) 922, 1795
BcnI CCSGG 1 cut(s) 1494
BcoDI GTCTC 2 cut(s) 1203, 1694
BfaI CTAG 6 cut(s) 200, 815, 1094, 1178, 1656, 1706
BfmI CTRYAG 2 cut(s) 765, 1116
BfuI GTATCC 2 cut(s) 922, 1795
BisI GCNGC 5 cut(s) 552, 795, 1443, 1620, 1623
BlsI GCNGC 5 cut(s) 553, 796, 1444, 1621, 1624
BmcAI AGTACT 1 cut(s) 267
Bme1390I CCNGG 2 cut(s) 500, 1494
Bme18I GGWCC 4 cut(s) 115, 617, 1009, 1508
BmgT120I GGNCC 5 cut(s) 115, 617, 1009, 1508, 1769
BmiI GGNNCC 6 cut(s) 116, 117, 497, 1010, 1011, 1761
BmrFI CCNGG 2 cut(s) 500, 1494
BmsI GCATC 5 cut(s) 65, 266, 944, 959, 1160
BpmI CTGGAG 2 cut(s) 57, 246
Bpu10I CCTNAGC 2 cut(s) 543, 1434
BpuEI CTTGAG 1 cut(s) 1070
BpuMI CCSGG 1 cut(s) 1494
Bsa29I ATCGAT 1 cut(s) 278
BsaBI GATNNNNATC 1 cut(s) 873
BsaHI GRCGYC 1 cut(s) 1174
BsaJI CCNNGG 4 cut(s) 729, 915, 1493, 1788
BsaWI WCCGGW 1 cut(s) 1156
BsaXI ACNNNNNCTCC 4 cut(s) 244, 274, 1138, 1168
Bsc4I CCNNNNNNNGG 1 cut(s) 111
Bse1I ACTGG 4 cut(s) 40, 263, 679, 1570
Bse3DI GCAATG 1 cut(s) 1192
Bse8I GATNNNNATC 1 cut(s) 873
BseAI TCCGGA 1 cut(s) 1156
BseBI CCWGG 1 cut(s) 500
BseCI ATCGAT 1 cut(s) 278
BseDI CCNNGG 4 cut(s) 729, 915, 1493, 1788
BseGI GGATG 6 cut(s) 239, 448, 874, 1133, 1366, 1822
BseJI GATNNNNATC 1 cut(s) 873
BseLI CCNNNNNNNGG 1 cut(s) 111
BseMI GCAATG 1 cut(s) 1192
BseMII CTCAG 5 cut(s) 465, 534, 798, 1383, 1425
BseNI ACTGG 4 cut(s) 40, 263, 679, 1570
BseRI GAGGAG 2 cut(s) 560, 1451
BseSI GKGCMC 2 cut(s) 690, 1581
BseXI GCAGC 4 cut(s) 538, 781, 1429, 1609
BsgI GTGCAG 2 cut(s) 780, 1608
BshFI GGCC 1 cut(s) 1770
BshVI ATCGAT 1 cut(s) 278
BsiSI CCGG 2 cut(s) 1157, 1493
BslFI GGGAC 2 cut(s) 128, 1022
BslI CCNNNNNNNGG 1 cut(s) 111
BsmAI GTCTC 2 cut(s) 1203, 1694
BsmFI GGGAC 2 cut(s) 128, 1022
BsmI GAATGC 1 cut(s) 1187
BsnI GGCC 1 cut(s) 1770
Bsp1286I GDGCHC 2 cut(s) 690, 1581
Bsp13I TCCGGA 1 cut(s) 1156
Bsp1407I TGTACA 1 cut(s) 1737
Bsp143I GATC 8 cut(s) 209, 279, 460, 1018, 1103, 1159, 1378, 1759
BspACI CCGC 4 cut(s) 690, 1149, 1581, 1620
BspANI GGCC 1 cut(s) 1770
BspCNI CTCAG 5 cut(s) 466, 535, 799, 1384, 1426
BspDI ATCGAT 1 cut(s) 278
BspEI TCCGGA 1 cut(s) 1156
BspLI GGNNCC 6 cut(s) 116, 117, 497, 1010, 1011, 1761
BspMAI CTGCAG 1 cut(s) 1120
BspPI GGATC 8 cut(s) 217, 455, 1013, 1111, 1167, 1373, 1754, 1767
BsrDI GCAATG 1 cut(s) 1192
BsrGI TGTACA 1 cut(s) 1737
BsrI ACTGG 4 cut(s) 40, 263, 679, 1570
BssECI CCNNGG 4 cut(s) 729, 915, 1493, 1788
BssMI GATC 8 cut(s) 209, 279, 460, 1018, 1103, 1159, 1378, 1759
BssNI GRCGYC 1 cut(s) 1174
BssT1I CCWWGG 3 cut(s) 729, 915, 1788
Bst2UI CCWGG 1 cut(s) 500
BstACI GRCGYC 1 cut(s) 1174
BstAUI TGTACA 1 cut(s) 1737
BstC8I GCNNGC 2 cut(s) 690, 1581
BstDEI CTNAG 5 cut(s) 474, 543, 807, 1392, 1434
BstF5I GGATG 6 cut(s) 239, 448, 874, 1133, 1366, 1822
BstKTI GATC 8 cut(s) 212, 282, 463, 1021, 1106, 1162, 1381, 1762
BstMAI GTCTC 2 cut(s) 1203, 1694
BstMBI GATC 8 cut(s) 209, 279, 460, 1018, 1103, 1159, 1378, 1759
BstMWI GCNNNNNNNGC 6 cut(s) 70, 548, 932, 964, 1439, 1580
BstNI CCWGG 1 cut(s) 500
BstSCI CCNGG 2 cut(s) 498, 1492
BstSFI CTRYAG 2 cut(s) 765, 1116
BstSLI GKGCMC 2 cut(s) 690, 1581
BstV1I GCAGC 4 cut(s) 538, 781, 1429, 1609
BstX2I RGATCY 5 cut(s) 209, 460, 1103, 1378, 1759
BstYI RGATCY 5 cut(s) 209, 460, 1103, 1378, 1759
Bsu15I ATCGAT 1 cut(s) 278
BsuI GTATCC 2 cut(s) 922, 1795
BsuRI GGCC 1 cut(s) 1770
BsuTUI ATCGAT 1 cut(s) 278
BtsCI GGATG 6 cut(s) 239, 448, 874, 1133, 1366, 1822
BtsI GCAGTG 1 cut(s) 1581
BtsIMutI CAGTG 4 cut(s) 105, 247, 999, 1581
Cac8I GCNNGC 2 cut(s) 690, 1581
Cfr13I GGNCC 5 cut(s) 115, 617, 1009, 1508, 1769
ClaI ATCGAT 1 cut(s) 278
CseI GACGC 2 cut(s) 30, 1163
Csp6I GTAC 2 cut(s) 266, 1738
CviAII CATG 9 cut(s) 60, 345, 450, 791, 954, 1263, 1368, 1682, 1735
CviQI GTAC 2 cut(s) 266, 1738
DdeI CTNAG 5 cut(s) 474, 543, 807, 1392, 1434
DpnI GATC 8 cut(s) 211, 281, 462, 1020, 1105, 1161, 1380, 1761
DpnII GATC 8 cut(s) 209, 279, 460, 1018, 1103, 1159, 1378, 1759
DraIII CACNNNGTG 1 cut(s) 487
Eco130I CCWWGG 3 cut(s) 729, 915, 1788
Eco47I GGWCC 4 cut(s) 115, 617, 1009, 1508
Eco57I CTGAAG 9 cut(s) 149, 381, 588, 744, 1193, 1299, 1479, 1862, 1883
EcoO109I RGGNCCY 2 cut(s) 115, 1009
EcoRII CCWGG 1 cut(s) 498
EcoT14I CCWWGG 3 cut(s) 729, 915, 1788
ErhI CCWWGG 3 cut(s) 729, 915, 1788
FaeI CATG 9 cut(s) 63, 348, 453, 794, 957, 1266, 1371, 1685, 1738
FalI AAGNNNNNCTT 4 cut(s) 159, 191, 1053, 1085
FaqI GGGAC 2 cut(s) 128, 1022
FatI CATG 9 cut(s) 59, 344, 449, 790, 953, 1262, 1367, 1681, 1734
FauI CCCGC 2 cut(s) 697, 1588
FauNDI CATATG 1 cut(s) 1886
Fnu4HI GCNGC 5 cut(s) 552, 795, 1443, 1620, 1623
FokI GGATG 6 cut(s) 246, 455, 881, 1140, 1373, 1809
Fsp4HI GCNGC 5 cut(s) 552, 795, 1443, 1620, 1623
FspBI CTAG 6 cut(s) 200, 815, 1094, 1178, 1656, 1706
GluI GCNGC 5 cut(s) 552, 795, 1443, 1620, 1623
GsuI CTGGAG 2 cut(s) 57, 246
HaeIII GGCC 1 cut(s) 1770
HapII CCGG 2 cut(s) 1157, 1493
HgaI GACGC 2 cut(s) 30, 1163
Hin1I GRCGYC 1 cut(s) 1174
Hin1II CATG 9 cut(s) 63, 348, 453, 794, 957, 1266, 1371, 1685, 1738
HindIII AAGCTT 2 cut(s) 71, 965
HinfI GANTC 4 cut(s) 658, 664, 1549, 1702
HpaII CCGG 2 cut(s) 1157, 1493
HphI GGTGA 2 cut(s) 498, 499
Hpy188III TCNNGA 8 cut(s) 113, 815, 854, 1007, 1157, 1178, 1706, 1745
HpyCH4IV ACGT 1 cut(s) 979
HpyF10VI GCNNNNNNNGC 6 cut(s) 70, 548, 932, 964, 1439, 1580
HpyF3I CTNAG 5 cut(s) 474, 543, 807, 1392, 1434
HpySE526I ACGT 1 cut(s) 979
Hsp92I GRCGYC 1 cut(s) 1174
Hsp92II CATG 9 cut(s) 63, 348, 453, 794, 957, 1266, 1371, 1685, 1738
KflI GGGWCCC 2 cut(s) 115, 1009
Kpn2I TCCGGA 1 cut(s) 1156
Kzo9I GATC 8 cut(s) 209, 279, 460, 1018, 1103, 1159, 1378, 1759
LmnI GCTCC 4 cut(s) 8, 38, 161, 932
Lsp1109I GCAGC 4 cut(s) 538, 781, 1429, 1609
LweI GCATC 5 cut(s) 65, 266, 944, 959, 1160
MaeI CTAG 6 cut(s) 200, 815, 1094, 1178, 1656, 1706
MaeII ACGT 1 cut(s) 979
MaeIII GTNAC 4 cut(s) 31, 236, 1130, 1834
MalI GATC 8 cut(s) 211, 281, 462, 1020, 1105, 1161, 1380, 1761
MboI GATC 8 cut(s) 209, 279, 460, 1018, 1103, 1159, 1378, 1759
MboII GAAGA 5 cut(s) 142, 378, 515, 1199, 1296
MflI RGATCY 5 cut(s) 209, 460, 1103, 1378, 1759
MhlI GDGCHC 2 cut(s) 690, 1581
MlyI GAGTC 1 cut(s) 1696
MmeI TCCRAC 2 cut(s) 383, 1301
MroI TCCGGA 1 cut(s) 1156
MroXI GAANNNNTTC 3 cut(s) 174, 1068, 1874
MseI TTAA 4 cut(s) 639, 993, 1247, 1530
MspA1I CMGCKG 1 cut(s) 1622
MspI CCGG 2 cut(s) 1157, 1493
MspR9I CCNGG 2 cut(s) 500, 1494
Mva1269I GAATGC 1 cut(s) 1187
MvaI CCWGG 1 cut(s) 500
MwoI GCNNNNNNNGC 6 cut(s) 70, 548, 932, 964, 1439, 1580
NciI CCSGG 1 cut(s) 1494
NdeI CATATG 1 cut(s) 1886
NdeII GATC 8 cut(s) 209, 279, 460, 1018, 1103, 1159, 1378, 1759
NlaIII CATG 9 cut(s) 63, 348, 453, 794, 957, 1266, 1371, 1685, 1738
NlaIV GGNNCC 6 cut(s) 116, 117, 497, 1010, 1011, 1761
NmeAIII GCCGAG 1 cut(s) 1150
NmuCI GTSAC 2 cut(s) 236, 1130
PctI GAATGC 1 cut(s) 1187
PdmI GAANNNNTTC 3 cut(s) 174, 1068, 1874
PfeI GAWTC 3 cut(s) 658, 664, 1549
PkrI GCNGC 5 cut(s) 553, 796, 1444, 1621, 1624
PleI GAGTC 1 cut(s) 1696
PpsI GAGTC 1 cut(s) 1696
PpuMI RGGWCCY 2 cut(s) 115, 1009
PshBI ATTAAT 2 cut(s) 639, 1530
Psp5II RGGWCCY 2 cut(s) 115, 1009
Psp6I CCWGG 1 cut(s) 498
PspGI CCWGG 1 cut(s) 498
PspN4I GGNNCC 6 cut(s) 116, 117, 497, 1010, 1011, 1761
PspPI GGNCC 5 cut(s) 115, 617, 1009, 1508, 1769
PspPPI RGGWCCY 2 cut(s) 115, 1009
PstI CTGCAG 1 cut(s) 1120
PsuI RGATCY 5 cut(s) 209, 460, 1103, 1378, 1759
RsaI GTAC 2 cut(s) 267, 1739
RsaNI GTAC 2 cut(s) 266, 1738
SaqAI TTAA 4 cut(s) 639, 993, 1247, 1530
SatI GCNGC 5 cut(s) 552, 795, 1443, 1620, 1623
Sau3AI GATC 8 cut(s) 209, 279, 460, 1018, 1103, 1159, 1378, 1759
Sau96I GGNCC 5 cut(s) 115, 617, 1009, 1508, 1769
ScaI AGTACT 1 cut(s) 267
SchI GAGTC 1 cut(s) 1696
ScrFI CCNGG 2 cut(s) 500, 1494
SduI GDGCHC 2 cut(s) 690, 1581
SfaNI GCATC 5 cut(s) 65, 266, 944, 959, 1160
SfcI CTRYAG 2 cut(s) 765, 1116
SinI GGWCC 4 cut(s) 115, 617, 1009, 1508
SmlI CTYRAG 1 cut(s) 1049
SmoI CTYRAG 1 cut(s) 1049
SsiI CCGC 4 cut(s) 690, 1149, 1581, 1620
SspI AATATT 1 cut(s) 1693
SspMI CTAG 6 cut(s) 200, 815, 1094, 1178, 1656, 1706
StyD4I CCNGG 2 cut(s) 498, 1492
StyI CCWWGG 3 cut(s) 729, 915, 1788
TaiI ACGT 1 cut(s) 982
TaqI TCGA 2 cut(s) 156, 278
TatI WGTACW 2 cut(s) 265, 1737
TauI GCSGC 1 cut(s) 1622
TfiI GAWTC 3 cut(s) 658, 664, 1549
Tru1I TTAA 4 cut(s) 639, 993, 1247, 1530
Tru9I TTAA 4 cut(s) 639, 993, 1247, 1530
TscAI CASTG 4 cut(s) 112, 247, 1006, 1581
TseFI GTSAC 2 cut(s) 236, 1130
TseI GCWGC 4 cut(s) 551, 794, 1442, 1622
Tsp45I GTSAC 2 cut(s) 236, 1130
TspRI CASTG 4 cut(s) 112, 247, 1006, 1581
VpaK11BI GGWCC 4 cut(s) 115, 617, 1009, 1508
VspI ATTAAT 2 cut(s) 639, 1530
XapI RAATTY 5 cut(s) 353, 560, 1271, 1451, 1644
XbaI TCTAGA 3 cut(s) 814, 1177, 1705
XmnI GAANNNNTTC 3 cut(s) 174, 1068, 1874
XspI CTAG 6 cut(s) 200, 815, 1094, 1178, 1656, 1706
ZrmI AGTACT 1 cut(s) 267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.