Rorug01G0016200

NmrA-like family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000709
Physical Location & Seq
Reverse (-)
2836792 .. 2846016
9225 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0016200.1

Sequence Viewer

Length: 1170 bp
ATGGTGACCGTCGAGGAAGTCCGCAAGGCTCAACGTGCTGAGGGTCCGGCCACCGTCTTGGCCATCGGGACAGCCACTCCTCCGAACTGTATTGACCAGAGCACATACCCCGACTACTACTTTCGTATCACCAACAGTGAGCACAAGGCTGAGCTCAAGGAGAAATTCCAGCGCATGTGTGACAAATCTATGATCAAGAAGCGTTATATGTATTTGACTGAAGAAATTCTCAAAGAGAATCCCAGCATGTGTGAGTACATGGCACCTTCACTTGATGCAAGACAAGACATGGTGGTGGTTGAAATTCCAAAGCTTGGGAAAGAGGCAGCTACCAAGGCCATTAAGGAATGGGGTCAGCCCAAGTCCAAAATCACCCACTTGGTCTTTTGTACTACTAGTGGTGTCGACATGCCCGGGGCTGATTACCAGCTCACTAAGCTCTTGGGCCTCCGCCCGTCCGTCAAGCGTCTCATGATGTACCAGCAAGGGTGTTTTGCCGGAGGCACGGTGCTCCGGTTGGCTAAGGACTTGGCCGAGAACAACAAGGGTGCACGTGTTCTTGTTGTTTGCTCAGAGATCACTGCCGTGACTTTCCGTGGGCCTAGCGACACTCATCTCGATAGTCTTGTGGGCCAAGCCTTGTTCGGTGATGGTGCTGCGGCCATTATTGTTGGGTCCGACCCATTGCCCGAGGTTGAGAAGCCTTTGTTCGAGTTGGTCTCAGCAGCCCAAACTATCCTTCCTGACAGTGATGGAGCCATCGACGGGCATCTTCGTGAAGTTGGGCTCACATTTCACCTCCTCAAGGATGTTCCCGGGCTGATTTCGAAGAATGTCGAGAAGAGCCTCAACGAGGCCTTCAAACCTTTGAATATCACGGACTGGAACTCACTATTCTGGATTGCACACCCGGGTGGCCCTGCAATTTTGGACCAAGTAGAGGCTAAATTGGGCCTGAAACCCGAAAAGTTAGAAGCCACAAGGCATATATTATCCGAGTATGGCAACATGTCTAGTGCTTGTGTGTTGTTTATTTTGGACGAGGTGAGGAGGAAGTCTGCAGCTAATGGGCACAAAACCACTGGAGAAGGGCTAGAGTGGGGTGTTCTATTTGGGTTTGGGCCTGGGCTTACCGTCGAGACCGTCGTGCTTCACAGTGTGGCAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Epimerase

Protein Analysis

389

Amino Acids

42.51

Weight (kDa)

6.04

Isoelectric Point (pI)

36.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Chal_sti_synt_N PF00195 5 - 228 8.9e-125 Chalcone and stilbene synthases, N-terminal domain
Chal_sti_synt_C PF02797 238 - 387 1.1e-70 Chalcone and stilbene synthases, C-terminal domain
ACP_syn_III_C PF08541 301 - 384 3.1e-06 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000709)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g01511 FvH4_7g01511 FvH4_7g01511 FvH4_7g01520 FvH4_7g01520 FvH4_7g01520 FvH4_7g01520 FvH4_7g01560 FvH4_7g01560
malus_domestica MD02G1303400.v1.1 MD02G1303800.v1.1 MD02G1303900.v1.1 MD02G1304200.v1.1 MD02G1304400.v1.1 MD02G1304900.v1.1 MD02G1305300.v1.1 MD02G1305400.v1.1 MD04G1006100.v1.1 MD07G1020300.v1.1 MD07G1020900.v1.1 MD07G1021200.v1.1 MD07G1021500.v1.1
prunus_persica Prupe.2G020700_v2.0.a1 Prupe.2G021000_v2.0.a1 Prupe.2G021100_v2.0.a1 Prupe.2G021300_v2.0.a1 Prupe.2G021300_v2.0.a1 Prupe.2G021500_v2.0.a1 Prupe.2G021500_v2.0.a1 Prupe.2G021500_v2.0.a1
pyrus_communis pycom02g25550 pycom02g25560 pycom02g25570 pycom02g25590 pycom07g01560 pycom07g01570 pycom07g01630
rosa_chinensis RchiOBHm_Chr1g0317371 RchiOBHm_Chr1g0317421 RchiOBHm_Chr1g0317441 RchiOBHm_Chr1g0317501 RchiOBHm_Chr1g0317581 RchiOBHm_Chr1g0317591
rosa_laevigata RLG00000030523 RLG00000030595 RLG00000030598
rosa_multiflora Rmu_sc0001403.1_g000012 Rmu_sc0001403.1_g000037 Rmu_sc0003374.1_g000001 Rmu_sc0003374.1_g000006 Rmu_sc0009583.1_g000010
rosa_roxburghii Rroxscaffold_4G00330280 Rroxscaffold_4G00330300 Rroxscaffold_4G00330420 Rroxscaffold_4G00330450
rosa_rugosa Rorug01G0016100 Rorug01G0016200 Rorug01G0016200 Rorug01G0016300 Rorug01G0016400
rosa_samantha Rh1BG023400 Rh1BG023800 Rh1BG024400 Rh1DG044600 Rh1DG044900 Rh1DG045100 Rh1DG045200 Rh1DG045400 Rh1DG045600
rosa_wichuraiana Rw0G002050 Rw1G001940 Rw1G001950 Rw1G002000 Rw1G002030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 262
AccB7I CCANNNNNTGG 1 cut(s) 314
AccI GTMKAC 1 cut(s) 405
AciI CCGC 3 cut(s) 22, 451, 659
AcoI YGGCCR 4 cut(s) 48, 60, 531, 660
AcsI RAATTY 3 cut(s) 164, 225, 303
AcuI CTGAAG 1 cut(s) 240
AcvI CACGTG 1 cut(s) 554
AdeI CACNNNGTG 1 cut(s) 1159
AfaI GTAC 3 cut(s) 257, 391, 479
AfiI CCNNNNNNNGG 5 cut(s) 314, 765, 805, 853, 940
AflIII ACRYGT 2 cut(s) 553, 1008
AgsI TTSAA 3 cut(s) 302, 862, 871
AhlI ACTAGT 1 cut(s) 395
AjnI CCWGG 1 cut(s) 1123
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
AleI CACNNNNGTG 2 cut(s) 584, 912
AluBI AGCT 7 cut(s) 154, 313, 329, 430, 439, 1064, 1166
AluI AGCT 7 cut(s) 154, 313, 329, 430, 439, 1064, 1166
Alw21I GWGCWC 5 cut(s) 104, 144, 156, 513, 553
Alw26I GTCTC 3 cut(s) 473, 724, 1133
Alw44I GTGCAC 1 cut(s) 549
Ama87I CYCGRG 4 cut(s) 413, 689, 815, 910
ApaLI GTGCAC 1 cut(s) 549
ApeKI GCWGC 5 cut(s) 326, 656, 725, 1061, 1163
ApoI RAATTY 3 cut(s) 164, 225, 303
Asp700I GAANNNNTTC 1 cut(s) 225
AspLEI GCGC 1 cut(s) 174
AspS9I GGNCC 9 cut(s) 44, 445, 599, 631, 675, 917, 931, 952, 1121
AsuC2I CCSGG 6 cut(s) 414, 415, 816, 817, 911, 912
AsuHPI GGTGA 6 cut(s) 16, 121, 364, 659, 788, 1057
AsuII TTCGAA 1 cut(s) 827
AvaI CYCGRG 4 cut(s) 413, 689, 815, 910
AvaII GGWCC 3 cut(s) 44, 675, 931
BaeGI GKGCMC 2 cut(s) 553, 1074
BaeI ACNNNNGTAYC 2 cut(s) 109, 142
BalI TGGCCA 1 cut(s) 62
BanI GGYRCC 1 cut(s) 262
BanII GRGCYC 2 cut(s) 156, 789
BbrPI CACGTG 1 cut(s) 554
Bbv12I GWGCWC 5 cut(s) 104, 144, 156, 513, 553
BbvCI CCTCAGC 1 cut(s) 39
BbvI GCAGC 4 cut(s) 338, 643, 737, 1073
BccI CCATC 4 cut(s) 71, 644, 746, 767
BceAI ACGGC 1 cut(s) 569
BciT130I CCWGG 1 cut(s) 1125
BclI TGATCA 1 cut(s) 192
BcnI CCSGG 6 cut(s) 414, 415, 816, 817, 911, 912
BcoDI GTCTC 3 cut(s) 473, 724, 1133
BcuI ACTAGT 1 cut(s) 395
BfaI CTAG 4 cut(s) 396, 603, 1014, 1094
BfmI CTRYAG 1 cut(s) 1059
BisI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
BlpI GCTNAGC 1 cut(s) 150
BlsI GCNGC 6 cut(s) 328, 658, 661, 727, 1063, 1165
Bme1390I CCNGG 7 cut(s) 414, 415, 816, 817, 911, 912, 1125
Bme18I GGWCC 3 cut(s) 44, 675, 931
BmeT110I CYCGRG 4 cut(s) 413, 689, 815, 910
BmgT120I GGNCC 9 cut(s) 44, 445, 599, 631, 675, 917, 931, 952, 1121
BmiI GGNNCC 4 cut(s) 45, 264, 676, 757
BmrFI CCNGG 7 cut(s) 414, 415, 816, 817, 911, 912, 1125
BmsI GCATC 2 cut(s) 265, 778
BplI GAGNNNNNCTC 2 cut(s) 704, 736
BpmI CTGGAG 1 cut(s) 1104
Bpu10I CCTNAGC 2 cut(s) 39, 522
Bpu1102I GCTNAGC 1 cut(s) 150
Bpu14I TTCGAA 1 cut(s) 827
BpuEI CTTGAG 2 cut(s) 140, 788
BpuMI CCSGG 6 cut(s) 414, 415, 816, 817, 911, 912
BsaAI YACGTR 1 cut(s) 554
BsaI GGTCTC 2 cut(s) 724, 1133
BsaJI CCNNGG 8 cut(s) 333, 413, 414, 595, 690, 815, 910, 1124
BsaWI WCCGGW 1 cut(s) 513
BsaXI ACNNNNNCTCC 4 cut(s) 61, 91, 492, 522
Bsc4I CCNNNNNNNGG 5 cut(s) 314, 765, 805, 853, 940
Bse1I ACTGG 2 cut(s) 887, 1087
Bse3DI GCAATG 1 cut(s) 683
BseBI CCWGG 1 cut(s) 1125
BseDI CCNNGG 8 cut(s) 333, 413, 414, 595, 690, 815, 910, 1124
BseGI GGATG 1 cut(s) 814
BseLI CCNNNNNNNGG 5 cut(s) 314, 765, 805, 853, 940
BseMI GCAATG 1 cut(s) 683
BseMII CTCAG 4 cut(s) 30, 141, 585, 735
BseNI ACTGG 2 cut(s) 887, 1087
BseRI GAGGAG 3 cut(s) 69, 791, 1063
BseSI GKGCMC 2 cut(s) 553, 1074
BseXI GCAGC 4 cut(s) 338, 643, 737, 1073
BseYI CCCAGC 1 cut(s) 242
BshNI GGYRCC 1 cut(s) 262
BsiHKAI GWGCWC 5 cut(s) 104, 144, 156, 513, 553
BsiHKCI CYCGRG 4 cut(s) 413, 689, 815, 910
BsiSI CCGG 6 cut(s) 47, 414, 498, 514, 816, 911
BslFI GGGAC 1 cut(s) 82
BslI CCNNNNNNNGG 5 cut(s) 314, 765, 805, 853, 940
BsmAI GTCTC 3 cut(s) 473, 724, 1133
BsmBI CGTCTC 1 cut(s) 473
BsmFI GGGAC 1 cut(s) 82
Bso31I GGTCTC 2 cut(s) 724, 1133
BsoBI CYCGRG 4 cut(s) 413, 689, 815, 910
Bsp119I TTCGAA 1 cut(s) 827
Bsp1286I GDGCHC 7 cut(s) 104, 144, 156, 513, 553, 789, 1074
Bsp143I GATC 2 cut(s) 192, 576
Bsp1720I GCTNAGC 1 cut(s) 150
BspACI CCGC 3 cut(s) 22, 451, 659
BspCNI CTCAG 4 cut(s) 31, 142, 584, 734
BspHI TCATGA 1 cut(s) 471
BspLI GGNNCC 4 cut(s) 45, 264, 676, 757
BspMAI CTGCAG 1 cut(s) 1063
BspQI GCTCTTC 1 cut(s) 836
BspT104I TTCGAA 1 cut(s) 827
BspT107I GGYRCC 1 cut(s) 262
BspTNI GGTCTC 2 cut(s) 724, 1133
BsrDI GCAATG 1 cut(s) 683
BsrI ACTGG 2 cut(s) 887, 1087
BssECI CCNNGG 8 cut(s) 333, 413, 414, 595, 690, 815, 910, 1124
BssMI GATC 2 cut(s) 192, 576
BssT1I CCWWGG 1 cut(s) 333
Bst2UI CCWGG 1 cut(s) 1125
Bst4CI ACNGT 9 cut(s) 10, 55, 89, 137, 508, 749, 1135, 1144, 1157
Bst6I CTCTTC 1 cut(s) 836
BstBAI YACGTR 1 cut(s) 554
BstBI TTCGAA 1 cut(s) 827
BstDEI CTNAG 6 cut(s) 39, 150, 435, 522, 571, 721
BstDSI CCRYGG 1 cut(s) 595
BstEII GGTNACC 1 cut(s) 4
BstENI CCTNNNNNAGG 2 cut(s) 803, 851
BstF5I GGATG 1 cut(s) 814
BstHHI GCGC 1 cut(s) 174
BstKTI GATC 2 cut(s) 195, 579
BstMAI GTCTC 3 cut(s) 473, 724, 1133
BstMBI GATC 2 cut(s) 192, 576
BstMWI GCNNNNNNNGC 3 cut(s) 35, 335, 436
BstNI CCWGG 1 cut(s) 1125
BstNSI RCATGY 4 cut(s) 178, 250, 412, 1012
BstPI GGTNACC 1 cut(s) 4
BstSCI CCNGG 7 cut(s) 412, 413, 814, 815, 909, 910, 1123
BstSFI CTRYAG 1 cut(s) 1059
BstSLI GKGCMC 2 cut(s) 553, 1074
BstV1I GCAGC 4 cut(s) 338, 643, 737, 1073
BstXI CCANNNNNNTGG 1 cut(s) 58
BtgI CCRYGG 1 cut(s) 595
BtsCI GGATG 1 cut(s) 814
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 5 cut(s) 142, 579, 754, 1080, 1162
CciI TCATGA 1 cut(s) 471
CfoI GCGC 1 cut(s) 174
Cfr13I GGNCC 9 cut(s) 44, 445, 599, 631, 675, 917, 931, 952, 1121
Cfr9I CCCGGG 3 cut(s) 413, 815, 910
CseI GACGC 1 cut(s) 455
Csp6I GTAC 3 cut(s) 256, 390, 478
CviAII CATG 7 cut(s) 175, 247, 259, 289, 409, 472, 1009
CviQI GTAC 3 cut(s) 256, 390, 478
DdeI CTNAG 6 cut(s) 39, 150, 435, 522, 571, 721
DpnI GATC 2 cut(s) 194, 578
DpnII GATC 2 cut(s) 192, 576
DraIII CACNNNGTG 1 cut(s) 1159
EaeI YGGCCR 4 cut(s) 48, 60, 531, 660
Eam1104I CTCTTC 1 cut(s) 836
EarI CTCTTC 1 cut(s) 836
EciI GGCGGA 1 cut(s) 440
Ecl136II GAGCTC 1 cut(s) 154
Eco130I CCWWGG 1 cut(s) 333
Eco147I AGGCCT 1 cut(s) 857
Eco24I GRGCYC 2 cut(s) 156, 789
Eco31I GGTCTC 2 cut(s) 724, 1133
Eco47I GGWCC 3 cut(s) 44, 675, 931
Eco53kI GAGCTC 1 cut(s) 154
Eco57I CTGAAG 1 cut(s) 240
Eco72I CACGTG 1 cut(s) 554
Eco88I CYCGRG 4 cut(s) 413, 689, 815, 910
Eco91I GGTNACC 1 cut(s) 4
EcoICRI GAGCTC 1 cut(s) 154
EcoNI CCTNNNNNAGG 2 cut(s) 803, 851
EcoO65I GGTNACC 1 cut(s) 4
EcoRII CCWGG 1 cut(s) 1123
EcoT14I CCWWGG 1 cut(s) 333
EcoT38I GRGCYC 2 cut(s) 156, 789
ErhI CCWWGG 1 cut(s) 333
Esp3I CGTCTC 1 cut(s) 473
FaeI CATG 7 cut(s) 178, 250, 262, 292, 412, 475, 1012
FaqI GGGAC 1 cut(s) 82
FatI CATG 7 cut(s) 174, 246, 258, 288, 408, 471, 1008
FbaI TGATCA 1 cut(s) 192
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
FokI GGATG 1 cut(s) 821
FriOI GRGCYC 2 cut(s) 156, 789
Fsp4HI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
FspBI CTAG 4 cut(s) 396, 603, 1014, 1094
GlaI GCGC 1 cut(s) 173
GluI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
GsaI CCCAGC 1 cut(s) 246
GsuI CTGGAG 1 cut(s) 1104
HapII CCGG 6 cut(s) 47, 414, 498, 514, 816, 911
HgaI GACGC 1 cut(s) 455
HhaI GCGC 1 cut(s) 174
Hin1II CATG 7 cut(s) 178, 250, 262, 292, 412, 475, 1012
Hin6I GCGC 1 cut(s) 172
HinP1I GCGC 1 cut(s) 172
HincII GTYRAC 1 cut(s) 406
HindII GTYRAC 1 cut(s) 406
HindIII AAGCTT 1 cut(s) 311
HinfI GANTC 1 cut(s) 238
HpaII CCGG 6 cut(s) 47, 414, 498, 514, 816, 911
HphI GGTGA 6 cut(s) 16, 121, 364, 659, 788, 1057
Hpy166II GTNNAC 2 cut(s) 406, 551
Hpy188I TCNGA 4 cut(s) 84, 574, 679, 997
Hpy188III TCNNGA 9 cut(s) 67, 196, 472, 617, 743, 776, 838, 898, 1138
Hpy8I GTNNAC 2 cut(s) 406, 551
Hpy99I CGWCG 4 cut(s) 14, 767, 1139, 1148
HpyAV CCTTC 4 cut(s) 276, 749, 868, 1082
HpyCH4III ACNGT 9 cut(s) 10, 55, 89, 137, 508, 749, 1135, 1144, 1157
HpyCH4IV ACGT 2 cut(s) 34, 553
HpyCH4V TGCA 5 cut(s) 278, 551, 905, 923, 1061
HpyF10VI GCNNNNNNNGC 3 cut(s) 35, 335, 436
HpyF3I CTNAG 6 cut(s) 39, 150, 435, 522, 571, 721
HpySE526I ACGT 2 cut(s) 34, 553
Hsp92II CATG 7 cut(s) 178, 250, 262, 292, 412, 475, 1012
HspAI GCGC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 192
Kzo9I GATC 2 cut(s) 192, 576
LguI GCTCTTC 1 cut(s) 836
LmnI GCTCC 2 cut(s) 516, 755
Lsp1109I GCAGC 4 cut(s) 338, 643, 737, 1073
LweI GCATC 2 cut(s) 265, 778
MaeI CTAG 4 cut(s) 396, 603, 1014, 1094
MaeII ACGT 2 cut(s) 34, 553
MaeIII GTNAC 3 cut(s) 4, 179, 586
MalI GATC 2 cut(s) 194, 578
MboI GATC 2 cut(s) 192, 576
MboII GAAGA 4 cut(s) 233, 764, 841, 853
MhlI GDGCHC 7 cut(s) 104, 144, 156, 513, 553, 789, 1074
MlsI TGGCCA 1 cut(s) 62
MluCI AATT 5 cut(s) 164, 225, 303, 924, 947
MluNI TGGCCA 1 cut(s) 62
MmeI TCCRAC 1 cut(s) 702
Mox20I TGGCCA 1 cut(s) 62
MroXI GAANNNNTTC 1 cut(s) 225
MscI TGGCCA 1 cut(s) 62
MseI TTAA 2 cut(s) 342, 1168
MslI CAYNNNNRTG 4 cut(s) 293, 584, 774, 912
Msp20I TGGCCA 1 cut(s) 62
MspI CCGG 6 cut(s) 47, 414, 498, 514, 816, 911
MspR9I CCNGG 7 cut(s) 414, 415, 816, 817, 911, 912, 1125
MvaI CCWGG 1 cut(s) 1125
MwoI GCNNNNNNNGC 3 cut(s) 35, 335, 436
NciI CCSGG 6 cut(s) 414, 415, 816, 817, 911, 912
NdeII GATC 2 cut(s) 192, 576
NlaIII CATG 7 cut(s) 178, 250, 262, 292, 412, 475, 1012
NlaIV GGNNCC 4 cut(s) 45, 264, 676, 757
NmeAIII GCCGAG 1 cut(s) 559
NmuCI GTSAC 3 cut(s) 4, 179, 586
NspI RCATGY 4 cut(s) 178, 250, 412, 1012
NspV TTCGAA 1 cut(s) 827
OliI CACNNNNGTG 2 cut(s) 584, 912
PagI TCATGA 1 cut(s) 471
PceI AGGCCT 1 cut(s) 857
PciI ACATGT 1 cut(s) 1008
PciSI GCTCTTC 1 cut(s) 836
PcsI WCGNNNNNNNCGW 1 cut(s) 1143
PdmI GAANNNNTTC 1 cut(s) 225
PfeI GAWTC 1 cut(s) 238
PflMI CCANNNNNTGG 1 cut(s) 314
PkrI GCNGC 6 cut(s) 328, 658, 661, 727, 1063, 1165
PmaCI CACGTG 1 cut(s) 554
PmlI CACGTG 1 cut(s) 554
Ppu21I YACGTR 1 cut(s) 554
PscI ACATGT 1 cut(s) 1008
Psp124BI GAGCTC 1 cut(s) 156
Psp6I CCWGG 1 cut(s) 1123
PspCI CACGTG 1 cut(s) 554
PspEI GGTNACC 1 cut(s) 4
PspFI CCCAGC 1 cut(s) 242
PspGI CCWGG 1 cut(s) 1123
PspN4I GGNNCC 4 cut(s) 45, 264, 676, 757
PspPI GGNCC 9 cut(s) 44, 445, 599, 631, 675, 917, 931, 952, 1121
PstI CTGCAG 1 cut(s) 1063
RsaI GTAC 3 cut(s) 257, 391, 479
RsaNI GTAC 3 cut(s) 256, 390, 478
RseI CAYNNNNRTG 4 cut(s) 293, 584, 774, 912
SacI GAGCTC 1 cut(s) 156
SalI GTCGAC 1 cut(s) 404
SapI GCTCTTC 1 cut(s) 836
SaqAI TTAA 2 cut(s) 342, 1168
SatI GCNGC 6 cut(s) 327, 657, 660, 726, 1062, 1164
Sau3AI GATC 2 cut(s) 192, 576
Sau96I GGNCC 9 cut(s) 44, 445, 599, 631, 675, 917, 931, 952, 1121
ScrFI CCNGG 7 cut(s) 414, 415, 816, 817, 911, 912, 1125
SduI GDGCHC 7 cut(s) 104, 144, 156, 513, 553, 789, 1074
SfaNI GCATC 2 cut(s) 265, 778
SfcI CTRYAG 1 cut(s) 1059
SfuI TTCGAA 1 cut(s) 827
SinI GGWCC 3 cut(s) 44, 675, 931
SmaI CCCGGG 3 cut(s) 415, 817, 912
SmiMI CAYNNNNRTG 4 cut(s) 293, 584, 774, 912
SmlI CTYRAG 2 cut(s) 155, 803
SmoI CTYRAG 2 cut(s) 155, 803
SpeI ACTAGT 1 cut(s) 395
Sse9I AATT 5 cut(s) 164, 225, 303, 924, 947
SseBI AGGCCT 1 cut(s) 857
SsiI CCGC 3 cut(s) 22, 451, 659
SspMI CTAG 4 cut(s) 396, 603, 1014, 1094
SstI GAGCTC 1 cut(s) 156
StuI AGGCCT 1 cut(s) 857
StyD4I CCNGG 7 cut(s) 412, 413, 814, 815, 909, 910, 1123
StyI CCWWGG 1 cut(s) 333
TaaI ACNGT 9 cut(s) 10, 55, 89, 137, 508, 749, 1135, 1144, 1157
TaiI ACGT 2 cut(s) 37, 556
TaqI TCGA 8 cut(s) 12, 405, 618, 711, 762, 827, 837, 1137
TasI AATT 5 cut(s) 164, 225, 303, 924, 947
TatI WGTACW 2 cut(s) 255, 389
TauI GCSGC 1 cut(s) 662
TfiI GAWTC 1 cut(s) 238
Tru1I TTAA 2 cut(s) 342, 1168
Tru9I TTAA 2 cut(s) 342, 1168
TscAI CASTG 5 cut(s) 142, 586, 754, 1087, 1162
TseFI GTSAC 3 cut(s) 4, 179, 586
TseI GCWGC 5 cut(s) 326, 656, 725, 1061, 1163
Tsp45I GTSAC 3 cut(s) 4, 179, 586
TspGWI ACGGA 3 cut(s) 448, 584, 893
TspMI CCCGGG 3 cut(s) 413, 815, 910
TspRI CASTG 5 cut(s) 142, 586, 754, 1087, 1162
Van91I CCANNNNNTGG 1 cut(s) 314
VneI GTGCAC 1 cut(s) 549
VpaK11BI GGWCC 3 cut(s) 44, 675, 931
XagI CCTNNNNNAGG 2 cut(s) 803, 851
XapI RAATTY 3 cut(s) 164, 225, 303
XceI RCATGY 4 cut(s) 178, 250, 412, 1012
XmaI CCCGGG 3 cut(s) 413, 815, 910
XmiI GTMKAC 1 cut(s) 405
XmnI GAANNNNTTC 1 cut(s) 225
XspI CTAG 4 cut(s) 396, 603, 1014, 1094
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.