Homeodomain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 881, 1722, 2882 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 127 |
| Acc16I | TGCGCA | 1 cut(s) | 1553 |
| Acc65I | GGTACC | 1 cut(s) | 2998 |
| AccB1I | GGYRCC | 1 cut(s) | 2998 |
| AccII | CGCG | 1 cut(s) | 2014 |
| AciI | CCGC | 5 cut(s) | 506, 1171, 1366, 3010, 3205 |
| AclI | AACGTT | 2 cut(s) | 1480, 1632 |
| AclWI | GGATC | 9 cut(s) | 563, 576, 704, 1382, 2259, 2538, 2543, 2773, 3221 |
| AcoI | YGGCCR | 3 cut(s) | 1064, 2417, 2903 |
| AcuI | CTGAAG | 3 cut(s) | 408, 2228, 2565 |
| AcyI | GRCGYC | 1 cut(s) | 242 |
| AdeI | CACNNNGTG | 1 cut(s) | 1463 |
| AfaI | GTAC | 8 cut(s) | 153, 974, 1061, 2438, 2498, 2813, 3000, 3183 |
| AfeI | AGCGCT | 2 cut(s) | 1151, 3320 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 931 |
| AflII | CTTAAG | 2 cut(s) | 680, 2938 |
| AflIII | ACRYGT | 1 cut(s) | 1682 |
| AhlI | ACTAGT | 1 cut(s) | 2912 |
| AjiI | CACGTC | 1 cut(s) | 1463 |
| AjnI | CCWGG | 3 cut(s) | 265, 2122, 3311 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2351, 2383 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2918, 2950 |
| Alw21I | GWGCWC | 2 cut(s) | 1546, 2754 |
| Alw26I | GTCTC | 2 cut(s) | 626, 2465 |
| AlwI | GGATC | 9 cut(s) | 563, 576, 704, 1382, 2259, 2538, 2543, 2773, 3221 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 449, 1589, 2876 |
| Ama87I | CYCGRG | 1 cut(s) | 1391 |
| Aor51HI | AGCGCT | 2 cut(s) | 1151, 3320 |
| AoxI | GGCC | 7 cut(s) | 67, 578, 1064, 1964, 2417, 2903, 3060 |
| ApeKI | GCWGC | 7 cut(s) | 508, 1152, 1496, 1607, 1784, 2712, 3335 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2327, 2445 |
| Asp718I | GGTACC | 1 cut(s) | 2998 |
| AspA2I | CCTAGG | 1 cut(s) | 2552 |
| AspLEI | GCGC | 4 cut(s) | 390, 1152, 1554, 3321 |
| AspS9I | GGNCC | 4 cut(s) | 1697, 1996, 2407, 3060 |
| AsuC2I | CCSGG | 1 cut(s) | 31 |
| AsuHPI | GGTGA | 4 cut(s) | 122, 618, 1063, 2326 |
| AsuII | TTCGAA | 2 cut(s) | 83, 101 |
| AvaI | CYCGRG | 1 cut(s) | 1391 |
| AvaII | GGWCC | 3 cut(s) | 1697, 1996, 2407 |
| AvrII | CCTAGG | 1 cut(s) | 2552 |
| BalI | TGGCCA | 1 cut(s) | 2419 |
| BamHI | GGATCC | 1 cut(s) | 568 |
| BanI | GGYRCC | 1 cut(s) | 2998 |
| BanII | GRGCYC | 3 cut(s) | 937, 1225, 2776 |
| BbsI | GAAGAC | 2 cut(s) | 30, 237 |
| Bbv12I | GWGCWC | 2 cut(s) | 1546, 2754 |
| BbvI | GCAGC | 7 cut(s) | 520, 1139, 1483, 1594, 1771, 2724, 3322 |
| BccI | CCATC | 8 cut(s) | 56, 527, 984, 1144, 1997, 2305, 2398, 2823 |
| BceAI | ACGGC | 1 cut(s) | 2243 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1558, 1592 |
| BciT130I | CCWGG | 3 cut(s) | 267, 2124, 3313 |
| BclI | TGATCA | 5 cut(s) | 664, 1260, 1822, 1833, 2503 |
| BcnI | CCSGG | 1 cut(s) | 31 |
| BcoDI | GTCTC | 2 cut(s) | 626, 2465 |
| BcuI | ACTAGT | 1 cut(s) | 2912 |
| BfaI | CTAG | 9 cut(s) | 116, 123, 714, 860, 965, 1320, 2553, 2699, 2913 |
| BfmI | CTRYAG | 1 cut(s) | 2976 |
| BfoI | RGCGCY | 3 cut(s) | 391, 1153, 3322 |
| BfrI | CTTAAG | 2 cut(s) | 680, 2938 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2105 |
| BglII | AGATCT | 1 cut(s) | 2139 |
| BisI | GCNGC | 7 cut(s) | 509, 1153, 1497, 1608, 1785, 2713, 3336 |
| BlnI | CCTAGG | 1 cut(s) | 2552 |
| BlpI | GCTNAGC | 1 cut(s) | 1639 |
| BlsI | GCNGC | 7 cut(s) | 510, 1154, 1498, 1609, 1786, 2714, 3337 |
| BmcAI | AGTACT | 1 cut(s) | 1061 |
| Bme1390I | CCNGG | 4 cut(s) | 31, 267, 2124, 3313 |
| Bme18I | GGWCC | 3 cut(s) | 1697, 1996, 2407 |
| BmeT110I | CYCGRG | 1 cut(s) | 1391 |
| BmgBI | CACGTC | 1 cut(s) | 1463 |
| BmgT120I | GGNCC | 4 cut(s) | 1697, 1996, 2407, 3060 |
| BmiI | GGNNCC | 8 cut(s) | 558, 570, 1161, 1698, 1779, 2409, 3000, 3173 |
| BmrFI | CCNGG | 4 cut(s) | 31, 267, 2124, 3313 |
| BmrI | ACTGGG | 1 cut(s) | 2042 |
| BmuI | ACTGGG | 1 cut(s) | 2042 |
| BpiI | GAAGAC | 2 cut(s) | 30, 237 |
| BpmI | CTGGAG | 2 cut(s) | 1130, 3302 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3231 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1639 |
| Bpu14I | TTCGAA | 2 cut(s) | 83, 101 |
| BpuEI | CTTGAG | 3 cut(s) | 2261, 2504, 3049 |
| BpuMI | CCSGG | 1 cut(s) | 31 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1386, 3225 |
| BsaHI | GRCGYC | 1 cut(s) | 242 |
| BsaJI | CCNNGG | 3 cut(s) | 512, 1859, 2552 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2549, 2579 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 931 |
| Bse118I | RCCGGY | 2 cut(s) | 1066, 2104 |
| Bse1I | ACTGG | 5 cut(s) | 1067, 2048, 2268, 3173, 3285 |
| Bse3DI | GCAATG | 3 cut(s) | 260, 975, 2234 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1386, 3225 |
| BseBI | CCWGG | 3 cut(s) | 267, 2124, 3313 |
| BseDI | CCNNGG | 3 cut(s) | 512, 1859, 2552 |
| BseGI | GGATG | 6 cut(s) | 67, 643, 1450, 2122, 2395, 3201 |
| BseJI | GATNNNNATC | 2 cut(s) | 1386, 3225 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 931 |
| BseMI | GCAATG | 3 cut(s) | 260, 975, 2234 |
| BseNI | ACTGG | 5 cut(s) | 1067, 2048, 2268, 3173, 3285 |
| BseRI | GAGGAG | 6 cut(s) | 566, 569, 1127, 1430, 3257, 3299 |
| BseXI | GCAGC | 7 cut(s) | 520, 1139, 1483, 1594, 1771, 2724, 3322 |
| BseYI | CCCAGC | 2 cut(s) | 2194, 2970 |
| BsgI | GTGCAG | 1 cut(s) | 728 |
| Bsh1236I | CGCG | 1 cut(s) | 2014 |
| BshFI | GGCC | 7 cut(s) | 69, 580, 1066, 1966, 2419, 2905, 3062 |
| BshNI | GGYRCC | 1 cut(s) | 2998 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1546, 2754 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1391 |
| BsiSI | CCGG | 3 cut(s) | 31, 1067, 2105 |
| BslFI | GGGAC | 2 cut(s) | 133, 1710 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 931 |
| BsmAI | GTCTC | 2 cut(s) | 626, 2465 |
| BsmBI | CGTCTC | 1 cut(s) | 626 |
| BsmFI | GGGAC | 2 cut(s) | 133, 1710 |
| BsmI | GAATGC | 4 cut(s) | 46, 91, 208, 1412 |
| BsnI | GGCC | 7 cut(s) | 69, 580, 1066, 1966, 2419, 2905, 3062 |
| BsoBI | CYCGRG | 1 cut(s) | 1391 |
| Bsp119I | TTCGAA | 2 cut(s) | 83, 101 |
| Bsp1286I | GDGCHC | 5 cut(s) | 937, 1225, 1546, 2754, 2776 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1639 |
| BspACI | CCGC | 5 cut(s) | 506, 1171, 1366, 3010, 3205 |
| BspANI | GGCC | 7 cut(s) | 69, 580, 1066, 1966, 2419, 2905, 3062 |
| BspFNI | CGCG | 1 cut(s) | 2014 |
| BspHI | TCATGA | 1 cut(s) | 1830 |
| BspLI | GGNNCC | 8 cut(s) | 558, 570, 1161, 1698, 1779, 2409, 3000, 3173 |
| BspMAI | CTGCAG | 1 cut(s) | 2980 |
| BspPI | GGATC | 9 cut(s) | 563, 576, 704, 1382, 2259, 2538, 2543, 2773, 3221 |
| BspQI | GCTCTTC | 3 cut(s) | 1631, 2739, 2742 |
| BspT104I | TTCGAA | 2 cut(s) | 83, 101 |
| BspT107I | GGYRCC | 1 cut(s) | 2998 |
| BspTI | CTTAAG | 2 cut(s) | 680, 2938 |
| BsrDI | GCAATG | 3 cut(s) | 260, 975, 2234 |
| BsrFI | RCCGGY | 2 cut(s) | 1066, 2104 |
| BsrI | ACTGG | 5 cut(s) | 1067, 2048, 2268, 3173, 3285 |
| BssAI | RCCGGY | 2 cut(s) | 1066, 2104 |
| BssECI | CCNNGG | 3 cut(s) | 512, 1859, 2552 |
| BssNI | GRCGYC | 1 cut(s) | 242 |
| BssT1I | CCWWGG | 2 cut(s) | 1859, 2552 |
| Bst2UI | CCWGG | 3 cut(s) | 267, 2124, 3313 |
| Bst4CI | ACNGT | 9 cut(s) | 399, 451, 1039, 1079, 1196, 2176, 2878, 3113, 3188 |
| Bst6I | CTCTTC | 6 cut(s) | 543, 1631, 2739, 2742, 3011, 3321 |
| BstACI | GRCGYC | 1 cut(s) | 242 |
| BstAFI | CTTAAG | 2 cut(s) | 680, 2938 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2236 |
| BstBI | TTCGAA | 2 cut(s) | 83, 101 |
| BstC8I | GCNNGC | 7 cut(s) | 1025, 1029, 1106, 1782, 2039, 2106, 2976 |
| BstDSI | CCRYGG | 1 cut(s) | 512 |
| BstEII | GGTNACC | 1 cut(s) | 1069 |
| BstF5I | GGATG | 6 cut(s) | 67, 643, 1450, 2122, 2395, 3201 |
| BstFNI | CGCG | 1 cut(s) | 2014 |
| BstH2I | RGCGCY | 3 cut(s) | 391, 1153, 3322 |
| BstHHI | GCGC | 4 cut(s) | 390, 1152, 1554, 3321 |
| BstMAI | GTCTC | 2 cut(s) | 626, 2465 |
| BstNI | CCWGG | 3 cut(s) | 267, 2124, 3313 |
| BstNSI | RCATGY | 1 cut(s) | 1686 |
| BstPI | GGTNACC | 1 cut(s) | 1069 |
| BstSCI | CCNGG | 4 cut(s) | 29, 265, 2122, 3311 |
| BstSFI | CTRYAG | 1 cut(s) | 2976 |
| BstUI | CGCG | 1 cut(s) | 2014 |
| BstV1I | GCAGC | 7 cut(s) | 520, 1139, 1483, 1594, 1771, 2724, 3322 |
| BstV2I | GAAGAC | 2 cut(s) | 30, 237 |
| BstX2I | RGATCY | 5 cut(s) | 568, 709, 2139, 2530, 2548 |
| BstYI | RGATCY | 5 cut(s) | 568, 709, 2139, 2530, 2548 |
| BsuRI | GGCC | 7 cut(s) | 69, 580, 1066, 1966, 2419, 2905, 3062 |
| BtgI | CCRYGG | 1 cut(s) | 512 |
| BtgZI | GCGATG | 3 cut(s) | 758, 1550, 2597 |
| BtrI | CACGTC | 1 cut(s) | 1463 |
| BtsCI | GGATG | 6 cut(s) | 67, 643, 1450, 2122, 2395, 3201 |
| BtsI | GCAGTG | 1 cut(s) | 1554 |
| BtsIMutI | CAGTG | 9 cut(s) | 395, 899, 1554, 1587, 2172, 2187, 2275, 3166, 3358 |
| Cac8I | GCNNGC | 7 cut(s) | 1025, 1029, 1106, 1782, 2039, 2106, 2976 |
| CaiI | CAGNNNCTG | 3 cut(s) | 449, 1589, 2876 |
| CciI | TCATGA | 1 cut(s) | 1830 |
| CfoI | GCGC | 4 cut(s) | 390, 1152, 1554, 3321 |
| Cfr10I | RCCGGY | 2 cut(s) | 1066, 2104 |
| Cfr13I | GGNCC | 4 cut(s) | 1697, 1996, 2407, 3060 |
| CseI | GACGC | 2 cut(s) | 231, 3168 |
| Csp6I | GTAC | 8 cut(s) | 152, 973, 1060, 2437, 2497, 2812, 2999, 3182 |
| CviAII | CATG | 7 cut(s) | 1156, 1473, 1683, 1831, 2255, 2415, 2932 |
| CviQI | GTAC | 8 cut(s) | 152, 973, 1060, 2437, 2497, 2812, 2999, 3182 |
| DraI | TTTAAA | 1 cut(s) | 1920 |
| DraIII | CACNNNGTG | 1 cut(s) | 1463 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 127 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 127 |
| EaeI | YGGCCR | 3 cut(s) | 1064, 2417, 2903 |
| Eam1104I | CTCTTC | 6 cut(s) | 543, 1631, 2739, 2742, 3011, 3321 |
| EarI | CTCTTC | 6 cut(s) | 543, 1631, 2739, 2742, 3011, 3321 |
| EciI | GGCGGA | 2 cut(s) | 1160, 2999 |
| Eco130I | CCWWGG | 2 cut(s) | 1859, 2552 |
| Eco24I | GRGCYC | 3 cut(s) | 937, 1225, 2776 |
| Eco47I | GGWCC | 3 cut(s) | 1697, 1996, 2407 |
| Eco47III | AGCGCT | 2 cut(s) | 1151, 3320 |
| Eco57I | CTGAAG | 3 cut(s) | 408, 2228, 2565 |
| Eco88I | CYCGRG | 1 cut(s) | 1391 |
| Eco91I | GGTNACC | 1 cut(s) | 1069 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1697, 3060 |
| EcoO65I | GGTNACC | 1 cut(s) | 1069 |
| EcoRI | GAATTC | 1 cut(s) | 1142 |
| EcoRII | CCWGG | 3 cut(s) | 265, 2122, 3311 |
| EcoT14I | CCWWGG | 2 cut(s) | 1859, 2552 |
| EcoT38I | GRGCYC | 3 cut(s) | 937, 1225, 2776 |
| ErhI | CCWWGG | 2 cut(s) | 1859, 2552 |
| Esp3I | CGTCTC | 1 cut(s) | 626 |
| FaeI | CATG | 7 cut(s) | 1159, 1476, 1686, 1834, 2258, 2418, 2935 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 287, 319, 1934, 1966, 2126, 2158 |
| FaqI | GGGAC | 2 cut(s) | 133, 1710 |
| FatI | CATG | 7 cut(s) | 1155, 1472, 1682, 1830, 2254, 2414, 2931 |
| FbaI | TGATCA | 5 cut(s) | 664, 1260, 1822, 1833, 2503 |
| Fnu4HI | GCNGC | 7 cut(s) | 509, 1153, 1497, 1608, 1785, 2713, 3336 |
| FokI | GGATG | 6 cut(s) | 74, 650, 1457, 2129, 2402, 3188 |
| FriOI | GRGCYC | 3 cut(s) | 937, 1225, 2776 |
| Fsp4HI | GCNGC | 7 cut(s) | 509, 1153, 1497, 1608, 1785, 2713, 3336 |
| FspBI | CTAG | 9 cut(s) | 116, 123, 714, 860, 965, 1320, 2553, 2699, 2913 |
| FspI | TGCGCA | 1 cut(s) | 1553 |
| GlaI | GCGC | 4 cut(s) | 389, 1151, 1553, 3320 |
| GluI | GCNGC | 7 cut(s) | 509, 1153, 1497, 1608, 1785, 2713, 3336 |
| GsaI | CCCAGC | 2 cut(s) | 2198, 2974 |
| GsuI | CTGGAG | 2 cut(s) | 1130, 3302 |
| HaeII | RGCGCY | 3 cut(s) | 391, 1153, 3322 |
| HaeIII | GGCC | 7 cut(s) | 69, 580, 1066, 1966, 2419, 2905, 3062 |
| HapII | CCGG | 3 cut(s) | 31, 1067, 2105 |
| HgaI | GACGC | 2 cut(s) | 231, 3168 |
| HhaI | GCGC | 4 cut(s) | 390, 1152, 1554, 3321 |
| Hin1I | GRCGYC | 1 cut(s) | 242 |
| Hin1II | CATG | 7 cut(s) | 1159, 1476, 1686, 1834, 2258, 2418, 2935 |
| Hin6I | GCGC | 4 cut(s) | 388, 1150, 1552, 3319 |
| HinP1I | GCGC | 4 cut(s) | 388, 1150, 1552, 3319 |
| HindIII | AAGCTT | 2 cut(s) | 1025, 2039 |
| HpaII | CCGG | 3 cut(s) | 31, 1067, 2105 |
| HphI | GGTGA | 4 cut(s) | 122, 618, 1063, 2326 |
| Hpy166II | GTNNAC | 4 cut(s) | 598, 1680, 2437, 3184 |
| Hpy8I | GTNNAC | 4 cut(s) | 598, 1680, 2437, 3184 |
| Hpy99I | CGWCG | 1 cut(s) | 1464 |
| HpyAV | CCTTC | 7 cut(s) | 570, 784, 1432, 1498, 1768, 2203, 2795 |
| HpyCH4III | ACNGT | 9 cut(s) | 399, 451, 1039, 1079, 1196, 2176, 2878, 3113, 3188 |
| HpyCH4IV | ACGT | 3 cut(s) | 1462, 1480, 1632 |
| HpySE526I | ACGT | 3 cut(s) | 1462, 1480, 1632 |
| Hsp92I | GRCGYC | 1 cut(s) | 242 |
| Hsp92II | CATG | 7 cut(s) | 1159, 1476, 1686, 1834, 2258, 2418, 2935 |
| HspAI | GCGC | 4 cut(s) | 388, 1150, 1552, 3319 |
| KpnI | GGTACC | 1 cut(s) | 3002 |
| KroI | GCCGGC | 1 cut(s) | 2104 |
| KroNI | GCCGGC | 1 cut(s) | 2106 |
| Ksp22I | TGATCA | 5 cut(s) | 664, 1260, 1822, 1833, 2503 |
| LguI | GCTCTTC | 3 cut(s) | 1631, 2739, 2742 |
| LmnI | GCTCC | 3 cut(s) | 94, 556, 1777 |
| Lsp1109I | GCAGC | 7 cut(s) | 520, 1139, 1483, 1594, 1771, 2724, 3322 |
| MaeI | CTAG | 9 cut(s) | 116, 123, 714, 860, 965, 1320, 2553, 2699, 2913 |
| MaeII | ACGT | 3 cut(s) | 1462, 1480, 1632 |
| MaeIII | GTNAC | 4 cut(s) | 418, 1069, 1946, 2334 |
| MflI | RGATCY | 5 cut(s) | 568, 709, 2139, 2530, 2548 |
| MhlI | GDGCHC | 5 cut(s) | 937, 1225, 1546, 2754, 2776 |
| MlsI | TGGCCA | 1 cut(s) | 2419 |
| MluNI | TGGCCA | 1 cut(s) | 2419 |
| MlyI | GAGTC | 4 cut(s) | 695, 1442, 1741, 3126 |
| MmeI | TCCRAC | 3 cut(s) | 381, 2508, 2928 |
| Mox20I | TGGCCA | 1 cut(s) | 2419 |
| MroNI | GCCGGC | 1 cut(s) | 2104 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2327, 2445 |
| MscI | TGGCCA | 1 cut(s) | 2419 |
| Msp20I | TGGCCA | 1 cut(s) | 2419 |
| MspA1I | CMGCKG | 2 cut(s) | 158, 1643 |
| MspCI | CTTAAG | 2 cut(s) | 680, 2938 |
| MspI | CCGG | 3 cut(s) | 31, 1067, 2105 |
| MspR9I | CCNGG | 4 cut(s) | 31, 267, 2124, 3313 |
| Mva1269I | GAATGC | 4 cut(s) | 46, 91, 208, 1412 |
| MvaI | CCWGG | 3 cut(s) | 267, 2124, 3313 |
| MvnI | CGCG | 1 cut(s) | 2014 |
| NaeI | GCCGGC | 1 cut(s) | 2106 |
| NciI | CCSGG | 1 cut(s) | 31 |
| NgoMIV | GCCGGC | 1 cut(s) | 2104 |
| NlaIII | CATG | 7 cut(s) | 1159, 1476, 1686, 1834, 2258, 2418, 2935 |
| NlaIV | GGNNCC | 8 cut(s) | 558, 570, 1161, 1698, 1779, 2409, 3000, 3173 |
| NmuCI | GTSAC | 4 cut(s) | 418, 1069, 1946, 2334 |
| NsbI | TGCGCA | 1 cut(s) | 1553 |
| NspI | RCATGY | 1 cut(s) | 1686 |
| NspV | TTCGAA | 2 cut(s) | 83, 101 |
| PagI | TCATGA | 1 cut(s) | 1830 |
| PciI | ACATGT | 1 cut(s) | 1682 |
| PciSI | GCTCTTC | 3 cut(s) | 1631, 2739, 2742 |
| PctI | GAATGC | 4 cut(s) | 46, 91, 208, 1412 |
| PdiI | GCCGGC | 1 cut(s) | 2106 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2327, 2445 |
| PfeI | GAWTC | 6 cut(s) | 1270, 1333, 2323, 2372, 2540, 2589 |
| PfoI | TCCNGGA | 1 cut(s) | 29 |
| PkrI | GCNGC | 7 cut(s) | 510, 1154, 1498, 1609, 1786, 2714, 3337 |
| PleI | GAGTC | 4 cut(s) | 695, 1441, 1741, 3125 |
| PpsI | GAGTC | 4 cut(s) | 695, 1441, 1741, 3125 |
| PpuMI | RGGWCCY | 1 cut(s) | 1697 |
| PscI | ACATGT | 1 cut(s) | 1682 |
| PsiI | TTATAA | 3 cut(s) | 881, 1722, 2882 |
| Psp1406I | AACGTT | 2 cut(s) | 1480, 1632 |
| Psp5II | RGGWCCY | 1 cut(s) | 1697 |
| Psp6I | CCWGG | 3 cut(s) | 265, 2122, 3311 |
| PspEI | GGTNACC | 1 cut(s) | 1069 |
| PspFI | CCCAGC | 2 cut(s) | 2194, 2970 |
| PspGI | CCWGG | 3 cut(s) | 265, 2122, 3311 |
| PspN4I | GGNNCC | 8 cut(s) | 558, 570, 1161, 1698, 1779, 2409, 3000, 3173 |
| PspPI | GGNCC | 4 cut(s) | 1697, 1996, 2407, 3060 |
| PspPPI | RGGWCCY | 1 cut(s) | 1697 |
| PstI | CTGCAG | 1 cut(s) | 2980 |
| PstNI | CAGNNNCTG | 3 cut(s) | 449, 1589, 2876 |
| PsuI | RGATCY | 5 cut(s) | 568, 709, 2139, 2530, 2548 |
| PvuII | CAGCTG | 2 cut(s) | 158, 1643 |
| RsaI | GTAC | 8 cut(s) | 153, 974, 1061, 2438, 2498, 2813, 3000, 3183 |
| RsaNI | GTAC | 8 cut(s) | 152, 973, 1060, 2437, 2497, 2812, 2999, 3182 |
| SapI | GCTCTTC | 3 cut(s) | 1631, 2739, 2742 |
| SatI | GCNGC | 7 cut(s) | 509, 1153, 1497, 1608, 1785, 2713, 3336 |
| Sau96I | GGNCC | 4 cut(s) | 1697, 1996, 2407, 3060 |
| ScaI | AGTACT | 1 cut(s) | 1061 |
| SchI | GAGTC | 4 cut(s) | 695, 1442, 1741, 3126 |
| ScrFI | CCNGG | 4 cut(s) | 31, 267, 2124, 3313 |
| SduI | GDGCHC | 5 cut(s) | 937, 1225, 1546, 2754, 2776 |
| SfcI | CTRYAG | 1 cut(s) | 2976 |
| SfuI | TTCGAA | 2 cut(s) | 83, 101 |
| SinI | GGWCC | 3 cut(s) | 1697, 1996, 2407 |
| SmlI | CTYRAG | 5 cut(s) | 680, 2240, 2519, 2938, 3028 |
| SmoI | CTYRAG | 5 cut(s) | 680, 2240, 2519, 2938, 3028 |
| SpeI | ACTAGT | 1 cut(s) | 2912 |
| SsiI | CCGC | 5 cut(s) | 506, 1171, 1366, 3010, 3205 |
| SspMI | CTAG | 9 cut(s) | 116, 123, 714, 860, 965, 1320, 2553, 2699, 2913 |
| StyD4I | CCNGG | 4 cut(s) | 29, 265, 2122, 3311 |
| StyI | CCWWGG | 2 cut(s) | 1859, 2552 |
| TaaI | ACNGT | 9 cut(s) | 399, 451, 1039, 1079, 1196, 2176, 2878, 3113, 3188 |
| TaiI | ACGT | 3 cut(s) | 1465, 1483, 1635 |
| TaqI | TCGA | 7 cut(s) | 83, 101, 1436, 1511, 1871, 2001, 2587 |
| TatI | WGTACW | 2 cut(s) | 1059, 3181 |
| TfiI | GAWTC | 6 cut(s) | 1270, 1333, 2323, 2372, 2540, 2589 |
| TscAI | CASTG | 9 cut(s) | 402, 906, 1561, 1594, 2179, 2194, 2275, 3173, 3358 |
| TseFI | GTSAC | 4 cut(s) | 418, 1069, 1946, 2334 |
| TseI | GCWGC | 7 cut(s) | 508, 1152, 1496, 1607, 1784, 2712, 3335 |
| Tsp45I | GTSAC | 4 cut(s) | 418, 1069, 1946, 2334 |
| TspGWI | ACGGA | 2 cut(s) | 650, 2642 |
| TspRI | CASTG | 9 cut(s) | 402, 906, 1561, 1594, 2179, 2194, 2275, 3173, 3358 |
| Vha464I | CTTAAG | 2 cut(s) | 680, 2938 |
| VpaK11BI | GGWCC | 3 cut(s) | 1697, 1996, 2407 |
| XceI | RCATGY | 1 cut(s) | 1686 |
| XmaJI | CCTAGG | 1 cut(s) | 2552 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2327, 2445 |
| XspI | CTAG | 9 cut(s) | 116, 123, 714, 860, 965, 1320, 2553, 2699, 2913 |
| ZrmI | AGTACT | 1 cut(s) | 1061 |