Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001049

Physical Location & Seq

Genomic Coordinates Reverse (-)

21755497 .. 21778707

Gene Structure 23211 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0212200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1185 bp

ATGAAAGTTATAGTAGTAACAAGTCCAGGTGGTCCGGATGTTCTCAAAGAAATCGAGGTGCCTGAACCAGAACTAAAGGACGATGGAGTCCTGATAAAGGTGGCGGCCACCGCCCTGAATGAGCCTGACCTTACTGCGAGGACGAGGTCTTTGCCGCCGATGCAAAGGGAGTACCTAGGTCTGGAATGTGCCGGAACGATCGTGAAAGTCGGGAAAGACGTCCAACGATGGAAAGTCGGCCAAGAGGTGTGTGCTGTTCTTAGTGGAGGAGGATACGCTGAGATGGTAGCTGTTCAAGAAGGATTAGTATTTCCTATCCCCAAAAGCATTTCTGTGGAGGAGGCTGCTAGTTTCCCTCAGGTGGCTTGTAGTGTTTGGGCCGCACTTTTTACTGAAGACAAGCTATCTTCTGAATATTGGTTACCTGCTGGTAGGAACAGTCGGCTAATTGCCGGTGAAACTATATTGGTTCATGGGGGATCCGGGGGAATTGGTTCATTTGCAATACAGTTAGCAAAAGCCCGGGGTGTAAAGGTGATTGTCACAGCAGGTAGTGACAAGTTAGAGTTTTGTAAGACAATTGGAGCTGATGCATGCATCAGTTTCAATTACAAGGACAAGGAAGATGACTTTATTGAAAGGGTAAATAGAGAAACAGGTGCCAACAAAGGTGTTGATGTCGTCTTGAGTAGCCTTCCGATTGAATATATGCCGCAGAACTATGCCTGTGTTAAGCAAGGTGGGACAGTTGTTAAGATCAATGGTTGTTGGATGCTACCAAAAGATACTCATGCTAGCACTCCACAGGCAAAAAAAGTGAATTCTGAGCTTCAGGCGAACTTCAACATAGGAGTGGCTGGCTTTCGGTTTAGAAATCTAGAAGAGAGAGCAAAAGTTGTCGAGGAGGTAAAGAAGCATGTGTGGCCATTAATAGAAGCTGGTAAGTGGGATGTGAAAAAGCTTTGCCTTGAGTATGACACCGAACCATATTACCAAGCTCTAGATGTTAAAGTCAGGGATTTTGCATCCGCGGTTGGGATTGAGGTTTTCAGTCCTGTAAGTCATACGCTGTTCAATCCAGGGGAGATTATACAGAAGGATCCTCTAATGGTATTGACAGTGAAATGGGCTTTCCAGCTTGCTTATGGCAAACTGCCCGGAGAGATTCGGTTGGTCAGTTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

394

Amino Acids

43.0

Weight (kDa)

5.8

Isoelectric Point (pI)

40.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ADH_N	PF08240	27 - 108	2.7e-14	Alcohol dehydrogenase GroES-like domain
ADH_zinc_N	PF00107	163 - 259	9.9e-19	Zinc-binding dehydrogenase
DNA_photolyase	PF00875	313 - 376	5.5e-07	DNA photolyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001049)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr6g0250991
rosa_rugosa	Rorug01G0009700 Rorug01G0012700 Rorug01G0053900 Rorug01G0068900 Rorug01G0087400 Rorug01G0087600 Rorug01G0093100 Rorug01G0098500 Rorug01G0140900.1 Rorug01G0147600.1 Rorug01G0148900.1 Rorug01G0186200 Rorug01G0245700 Rorug01G0262700 Rorug02G0006900 Rorug02G0154500 Rorug02G0186800 Rorug02G0203500 Rorug02G0219400 Rorug02G0252200 Rorug02G0351800 Rorug02G0525300 Rorug03G0349300 Rorug03G0353100 Rorug04G0333200 Rorug04G0379900 Rorug05G0212200 Rorug05G0217800 Rorug05G0223400 Rorug05G0287900 Rorug05G0342200 Rorug05G0373800 Rorug05G0386200 Rorug05G0396200 Rorug05G0398500 Rorug05G0398600 Rorug05G0398700 Rorug05G0398800 Rorug05G0451900 Rorug05G0485400 Rorug05G0541100 Rorug06G0124300 Rorug06G0371300 Rorug07G0094900 Rorug07G0098800 Rorug07G0098900 Rorug07G0172600 Rorug07G0253100 Rorug07G0253200 Rorug07G0267100 Rorug07G0268100 Rorug07G0270500 Rorug07G0271400 Rorug07G0311400 Rorug07G0311500 Rorug07G0311600 Rorug07G0311700 Rorug07G0311800 Rorug07G0337900 Rorug07G0342000

Species

Orthologous Gene IDs

rosa_chinensis

RchiOBHm_Chr6g0250991

rosa_rugosa

Rorug01G0009700 Rorug01G0012700 Rorug01G0053900 Rorug01G0068900 Rorug01G0087400 Rorug01G0087600 Rorug01G0093100 Rorug01G0098500 Rorug01G0140900.1 Rorug01G0147600.1 Rorug01G0148900.1 Rorug01G0186200 Rorug01G0245700 Rorug01G0262700 Rorug02G0006900 Rorug02G0154500 Rorug02G0186800 Rorug02G0203500 Rorug02G0219400 Rorug02G0252200 Rorug02G0351800 Rorug02G0525300 Rorug03G0349300 Rorug03G0353100 Rorug04G0333200 Rorug04G0379900 Rorug05G0212200 Rorug05G0217800 Rorug05G0223400 Rorug05G0287900 Rorug05G0342200 Rorug05G0373800 Rorug05G0386200 Rorug05G0396200 Rorug05G0398500 Rorug05G0398600 Rorug05G0398700 Rorug05G0398800 Rorug05G0451900 Rorug05G0485400 Rorug05G0541100 Rorug06G0124300 Rorug06G0371300 Rorug07G0094900 Rorug07G0098800 Rorug07G0098900 Rorug07G0172600 Rorug07G0253100 Rorug07G0253200 Rorug07G0267100 Rorug07G0268100 Rorug07G0270500 Rorug07G0271400 Rorug07G0311400 Rorug07G0311500 Rorug07G0311600 Rorug07G0311700 Rorug07G0311800 Rorug07G0337900 Rorug07G0342000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	86
AatII	GACGTC	1 cut(s)	222
Acc36I	ACCTGC	2 cut(s)	433, 539
AccB1I	GGYRCC	2 cut(s)	58, 659
AccII	CGCG	1 cut(s)	1031
AccIII	TCCGGA	1 cut(s)	34
AciI	CCGC	7 cut(s)	104, 111, 155, 381, 713, 1029, 1031
AclWI	GGATC	4 cut(s)	474, 487, 1094, 1107
AcoI	YGGCCR	3 cut(s)	105, 238, 923
AcsI	RAATTY	1 cut(s)	820
AcuI	CTGAAG	2 cut(s)	414, 815
AcyI	GRCGYC	1 cut(s)	219
AfaI	GTAC	1 cut(s)	173
AfiI	CCNNNNNNNGG	4 cut(s)	97, 181, 361, 1035
AgsI	TTSAA	6 cut(s)	296, 607, 638, 704, 844, 1075
AjnI	CCWGG	2 cut(s)	25, 1078
AluBI	AGCT	8 cut(s)	290, 403, 587, 829, 938, 961, 998, 1138
AluI	AGCT	8 cut(s)	290, 403, 587, 829, 938, 961, 998, 1138
AlwI	GGATC	4 cut(s)	474, 487, 1094, 1107
Ama87I	CYCGRG	1 cut(s)	522
Aor13HI	TCCGGA	1 cut(s)	34
AoxI	GGCC	4 cut(s)	105, 238, 378, 923
ApeKI	GCWGC	1 cut(s)	344
ApoI	RAATTY	1 cut(s)	820
ArsI	GACNNNNNNTTYG	2 cut(s)	133, 165
AseI	ATTAAT	1 cut(s)	929
Asp700I	GAANNNNTTC	1 cut(s)	493
AspA2I	CCTAGG	1 cut(s)	175
AspS9I	GGNCC	2 cut(s)	32, 378
AsuC2I	CCSGG	4 cut(s)	484, 523, 524, 1158
AsuHPI	GGTGA	2 cut(s)	467, 547
AsuNHI	GCTAGC	1 cut(s)	794
AvaI	CYCGRG	1 cut(s)	522
AvaII	GGWCC	1 cut(s)	32
AvrII	CCTAGG	1 cut(s)	175
AxyI	CCTNAGG	1 cut(s)	357
BalI	TGGCCA	1 cut(s)	925
BamHI	GGATCC	2 cut(s)	479, 1099
BanI	GGYRCC	2 cut(s)	58, 659
BbsI	GAAGAC	1 cut(s)	402
BbvI	GCAGC	1 cut(s)	331
BccI	CCATC	3 cut(s)	77, 222, 277
BcgI	CGANNNNNNTGC	2 cut(s)	133, 167
BciT130I	CCWGG	2 cut(s)	27, 1080
BciVI	GTATCC	1 cut(s)	266
BcnI	CCSGG	4 cut(s)	484, 523, 524, 1158
BfaI	CTAG	5 cut(s)	176, 348, 795, 878, 1001
BfuAI	ACCTGC	2 cut(s)	433, 539
BfuI	GTATCC	1 cut(s)	266
BisI	GCNGC	5 cut(s)	105, 155, 345, 381, 713
BlnI	CCTAGG	1 cut(s)	175
BlsI	GCNGC	5 cut(s)	106, 156, 346, 382, 714
Bme1390I	CCNGG	6 cut(s)	27, 484, 523, 524, 1080, 1158
Bme18I	GGWCC	1 cut(s)	32
BmeT110I	CYCGRG	1 cut(s)	522
BmgT120I	GGNCC	2 cut(s)	32, 378
BmiI	GGNNCC	4 cut(s)	60, 481, 661, 1101
BmrFI	CCNGG	6 cut(s)	27, 484, 523, 524, 1080, 1158
BmsI	GCATC	5 cut(s)	150, 580, 606, 762, 1034
BmtI	GCTAGC	1 cut(s)	798
BpiI	GAAGAC	1 cut(s)	402
BpuEI	CTTGAG	2 cut(s)	706, 989
BpuMI	CCSGG	4 cut(s)	484, 523, 524, 1158
BsaHI	GRCGYC	1 cut(s)	219
BsaJI	CCNNGG	6 cut(s)	175, 483, 522, 523, 1029, 1079
BsaWI	WCCGGW	1 cut(s)	34
Bsc4I	CCNNNNNNNGG	4 cut(s)	97, 181, 361, 1035
Bse118I	RCCGGY	1 cut(s)	452
Bse21I	CCTNAGG	1 cut(s)	357
BseAI	TCCGGA	1 cut(s)	34
BseBI	CCWGG	2 cut(s)	27, 1080
BseDI	CCNNGG	6 cut(s)	175, 483, 522, 523, 1029, 1079
BseGI	GGATG	4 cut(s)	43, 777, 955, 1025
BseLI	CCNNNNNNNGG	4 cut(s)	97, 181, 361, 1035
BseMII	CTCAG	3 cut(s)	270, 371, 816
BseRI	GAGGAG	3 cut(s)	282, 353, 917
BseXI	GCAGC	1 cut(s)	331
Bsh1236I	CGCG	1 cut(s)	1031
Bsh1285I	CGRYCG	1 cut(s)	201
BshFI	GGCC	4 cut(s)	107, 240, 380, 925
BshNI	GGYRCC	2 cut(s)	58, 659
BsiEI	CGRYCG	1 cut(s)	201
BsiHKCI	CYCGRG	1 cut(s)	522
BsiSI	CCGG	6 cut(s)	35, 192, 453, 483, 523, 1158
BslFI	GGGAC	1 cut(s)	757
BslI	CCNNNNNNNGG	4 cut(s)	97, 181, 361, 1035
BsmFI	GGGAC	1 cut(s)	757
BsnI	GGCC	4 cut(s)	107, 240, 380, 925
BsoBI	CYCGRG	1 cut(s)	522
Bsp13I	TCCGGA	1 cut(s)	34
Bsp143I	GATC	4 cut(s)	198, 479, 756, 1099
BspACI	CCGC	7 cut(s)	104, 111, 155, 381, 713, 1029, 1031
BspANI	GGCC	4 cut(s)	107, 240, 380, 925
BspCNI	CTCAG	3 cut(s)	271, 370, 817
BspEI	TCCGGA	1 cut(s)	34
BspFNI	CGCG	1 cut(s)	1031
BspLI	GGNNCC	4 cut(s)	60, 481, 661, 1101
BspMI	ACCTGC	2 cut(s)	433, 539
BspOI	GCTAGC	1 cut(s)	798
BspPI	GGATC	4 cut(s)	474, 487, 1094, 1107
BspT107I	GGYRCC	2 cut(s)	58, 659
BsrFI	RCCGGY	1 cut(s)	452
BssAI	RCCGGY	1 cut(s)	452
BssECI	CCNNGG	6 cut(s)	175, 483, 522, 523, 1029, 1079
BssMI	GATC	4 cut(s)	198, 479, 756, 1099
BssNI	GRCGYC	1 cut(s)	219
BssT1I	CCWWGG	1 cut(s)	175
Bst2UI	CCWGG	2 cut(s)	27, 1080
Bst4CI	ACNGT	4 cut(s)	440, 510, 748, 1120
Bst6I	CTCTTC	1 cut(s)	876
BstACI	GRCGYC	1 cut(s)	219
BstC8I	GCNNGC	4 cut(s)	595, 796, 859, 1140
BstDEI	CTNAG	4 cut(s)	260, 279, 357, 825
BstDSI	CCRYGG	1 cut(s)	1029
BstEII	GGTNACC	1 cut(s)	420
BstENI	CCTNNNNNAGG	1 cut(s)	95
BstF5I	GGATG	4 cut(s)	43, 777, 955, 1025
BstFNI	CGCG	1 cut(s)	1031
BstKTI	GATC	4 cut(s)	201, 482, 759, 1102
BstMBI	GATC	4 cut(s)	198, 479, 756, 1099
BstMCI	CGRYCG	1 cut(s)	201
BstMWI	GCNNNNNNNGC	3 cut(s)	110, 160, 922
BstNI	CCWGG	2 cut(s)	27, 1080
BstNSI	RCATGY	2 cut(s)	597, 920
BstPI	GGTNACC	1 cut(s)	420
BstSCI	CCNGG	6 cut(s)	25, 482, 521, 522, 1078, 1156
BstUI	CGCG	1 cut(s)	1031
BstV1I	GCAGC	1 cut(s)	331
BstV2I	GAAGAC	1 cut(s)	402
BstX2I	RGATCY	2 cut(s)	479, 1099
BstYI	RGATCY	2 cut(s)	479, 1099
Bsu36I	CCTNAGG	1 cut(s)	357
BsuI	GTATCC	1 cut(s)	266
BsuRI	GGCC	4 cut(s)	107, 240, 380, 925
BtgI	CCRYGG	1 cut(s)	1029
BtsCI	GGATG	4 cut(s)	43, 777, 955, 1025
BtsIMutI	CAGTG	1 cut(s)	1125
BveI	ACCTGC	2 cut(s)	433, 539
Cac8I	GCNNGC	4 cut(s)	595, 796, 859, 1140
Cfr10I	RCCGGY	1 cut(s)	452
Cfr13I	GGNCC	2 cut(s)	32, 378
Cfr42I	CCGCGG	1 cut(s)	1032
Cfr9I	CCCGGG	1 cut(s)	522
Csp6I	GTAC	1 cut(s)	172
CviAII	CATG	4 cut(s)	473, 594, 791, 917
CviQI	GTAC	1 cut(s)	172
DdeI	CTNAG	4 cut(s)	260, 279, 357, 825
DpnI	GATC	4 cut(s)	200, 481, 758, 1101
DpnII	GATC	4 cut(s)	198, 479, 756, 1099
DrdI	GACNNNNNNGTC	1 cut(s)	86
DseDI	GACNNNNNNGTC	1 cut(s)	86
EaeI	YGGCCR	3 cut(s)	105, 238, 923
Eam1104I	CTCTTC	1 cut(s)	876
EarI	CTCTTC	1 cut(s)	876
Eco130I	CCWWGG	1 cut(s)	175
Eco47I	GGWCC	1 cut(s)	32
Eco57I	CTGAAG	2 cut(s)	414, 815
Eco81I	CCTNAGG	1 cut(s)	357
Eco88I	CYCGRG	1 cut(s)	522
Eco91I	GGTNACC	1 cut(s)	420
EcoNI	CCTNNNNNAGG	1 cut(s)	95
EcoO65I	GGTNACC	1 cut(s)	420
EcoRI	GAATTC	1 cut(s)	820
EcoRII	CCWGG	2 cut(s)	25, 1078
EcoT14I	CCWWGG	1 cut(s)	175
EcoT22I	ATGCAT	2 cut(s)	595, 599
ErhI	CCWWGG	1 cut(s)	175
FaeI	CATG	4 cut(s)	476, 597, 794, 920
FaqI	GGGAC	1 cut(s)	757
FatI	CATG	4 cut(s)	472, 593, 790, 916
Fnu4HI	GCNGC	5 cut(s)	105, 155, 345, 381, 713
FokI	GGATG	4 cut(s)	50, 784, 962, 1012
Fsp4HI	GCNGC	5 cut(s)	105, 155, 345, 381, 713
FspBI	CTAG	5 cut(s)	176, 348, 795, 878, 1001
GluI	GCNGC	5 cut(s)	105, 155, 345, 381, 713
HaeIII	GGCC	4 cut(s)	107, 240, 380, 925
HapII	CCGG	6 cut(s)	35, 192, 453, 483, 523, 1158
Hin1I	GRCGYC	1 cut(s)	219
Hin1II	CATG	4 cut(s)	476, 597, 794, 920
HindIII	AAGCTT	1 cut(s)	959
HinfI	GANTC	2 cut(s)	87, 1165
HpaII	CCGG	6 cut(s)	35, 192, 453, 483, 523, 1158
HphI	GGTGA	2 cut(s)	467, 547
Hpy188I	TCNGA	3 cut(s)	412, 699, 826
Hpy188III	TCNNGA	9 cut(s)	35, 91, 182, 202, 211, 296, 685, 878, 1001
HpyAV	CCTTC	3 cut(s)	293, 704, 1090
HpyCH4III	ACNGT	4 cut(s)	440, 510, 748, 1120
HpyCH4IV	ACGT	1 cut(s)	219
HpyCH4V	TGCA	5 cut(s)	163, 503, 593, 597, 1025
HpyF10VI	GCNNNNNNNGC	3 cut(s)	110, 160, 922
HpyF3I	CTNAG	4 cut(s)	260, 279, 357, 825
HpySE526I	ACGT	1 cut(s)	219
Hsp92I	GRCGYC	1 cut(s)	219
Hsp92II	CATG	4 cut(s)	476, 597, 794, 920
Kpn2I	TCCGGA	1 cut(s)	34
KspI	CCGCGG	1 cut(s)	1032
Kzo9I	GATC	4 cut(s)	198, 479, 756, 1099
LmnI	GCTCC	1 cut(s)	584
Lsp1109I	GCAGC	1 cut(s)	331
LweI	GCATC	5 cut(s)	150, 580, 606, 762, 1034
MaeI	CTAG	5 cut(s)	176, 348, 795, 878, 1001
MaeII	ACGT	1 cut(s)	219
MaeIII	GTNAC	4 cut(s)	16, 420, 541, 554
MalI	GATC	4 cut(s)	200, 481, 758, 1101
MboI	GATC	4 cut(s)	198, 479, 756, 1099
MboII	GAAGA	4 cut(s)	399, 407, 635, 893
MfeI	CAATTG	1 cut(s)	579
MflI	RGATCY	2 cut(s)	479, 1099
MlsI	TGGCCA	1 cut(s)	925
MluCI	AATT	5 cut(s)	447, 489, 579, 607, 820
MluNI	TGGCCA	1 cut(s)	925
MlyI	GAGTC	1 cut(s)	96
MmeI	TCCRAC	2 cut(s)	247, 749
Mox20I	TGGCCA	1 cut(s)	925
Mph1103I	ATGCAT	2 cut(s)	595, 599
MroI	TCCGGA	1 cut(s)	34
MroXI	GAANNNNTTC	1 cut(s)	493
MscI	TGGCCA	1 cut(s)	925
MseI	TTAA	4 cut(s)	732, 753, 929, 1008
MslI	CAYNNNNRTG	2 cut(s)	332, 851
Msp20I	TGGCCA	1 cut(s)	925
MspA1I	CMGCKG	1 cut(s)	1031
MspI	CCGG	6 cut(s)	35, 192, 453, 483, 523, 1158
MspR9I	CCNGG	6 cut(s)	27, 484, 523, 524, 1080, 1158
MunI	CAATTG	1 cut(s)	579
MvaI	CCWGG	2 cut(s)	27, 1080
MvnI	CGCG	1 cut(s)	1031
MwoI	GCNNNNNNNGC	3 cut(s)	110, 160, 922
NciI	CCSGG	4 cut(s)	484, 523, 524, 1158
NdeII	GATC	4 cut(s)	198, 479, 756, 1099
NheI	GCTAGC	1 cut(s)	794
NlaIII	CATG	4 cut(s)	476, 597, 794, 920
NlaIV	GGNNCC	4 cut(s)	60, 481, 661, 1101
NmuCI	GTSAC	2 cut(s)	541, 554
NsiI	ATGCAT	2 cut(s)	595, 599
NspI	RCATGY	2 cut(s)	597, 920
PaeI	GCATGC	1 cut(s)	597
PcsI	WCGNNNNNNNCGW	1 cut(s)	216
PdmI	GAANNNNTTC	1 cut(s)	493
PfeI	GAWTC	1 cut(s)	1165
PflFI	GACNNNGTC	1 cut(s)	145
PkrI	GCNGC	5 cut(s)	106, 156, 346, 382, 714
Ple19I	CGATCG	1 cut(s)	201
PleI	GAGTC	1 cut(s)	95
PpsI	GAGTC	1 cut(s)	95
PshBI	ATTAAT	1 cut(s)	929
Psp6I	CCWGG	2 cut(s)	25, 1078
PspEI	GGTNACC	1 cut(s)	420
PspGI	CCWGG	2 cut(s)	25, 1078
PspN4I	GGNNCC	4 cut(s)	60, 481, 661, 1101
PspPI	GGNCC	2 cut(s)	32, 378
PsuI	RGATCY	2 cut(s)	479, 1099
PsyI	GACNNNGTC	1 cut(s)	145
PvuI	CGATCG	1 cut(s)	201
RsaI	GTAC	1 cut(s)	173
RsaNI	GTAC	1 cut(s)	172
RseI	CAYNNNNRTG	2 cut(s)	332, 851
SacII	CCGCGG	1 cut(s)	1032
SaqAI	TTAA	4 cut(s)	732, 753, 929, 1008
SatI	GCNGC	5 cut(s)	105, 155, 345, 381, 713
Sau3AI	GATC	4 cut(s)	198, 479, 756, 1099
Sau96I	GGNCC	2 cut(s)	32, 378
SchI	GAGTC	1 cut(s)	96
ScrFI	CCNGG	6 cut(s)	27, 484, 523, 524, 1080, 1158
SfaNI	GCATC	5 cut(s)	150, 580, 606, 762, 1034
Sfr303I	CCGCGG	1 cut(s)	1032
SgrBI	CCGCGG	1 cut(s)	1032
SinI	GGWCC	1 cut(s)	32
SmaI	CCCGGG	1 cut(s)	524
SmiMI	CAYNNNNRTG	2 cut(s)	332, 851
SmlI	CTYRAG	2 cut(s)	685, 968
SmoI	CTYRAG	2 cut(s)	685, 968
SphI	GCATGC	1 cut(s)	597
Sse9I	AATT	5 cut(s)	447, 489, 579, 607, 820
SsiI	CCGC	7 cut(s)	104, 111, 155, 381, 713, 1029, 1031
SspI	AATATT	1 cut(s)	416
SspMI	CTAG	5 cut(s)	176, 348, 795, 878, 1001
StyD4I	CCNGG	6 cut(s)	25, 482, 521, 522, 1078, 1156
StyI	CCWWGG	1 cut(s)	175
TaaI	ACNGT	4 cut(s)	440, 510, 748, 1120
TaiI	ACGT	1 cut(s)	222
TaqI	TCGA	2 cut(s)	54, 900
TasI	AATT	5 cut(s)	447, 489, 579, 607, 820
TauI	GCSGC	4 cut(s)	107, 157, 383, 715
TfiI	GAWTC	1 cut(s)	1165
Tru1I	TTAA	4 cut(s)	732, 753, 929, 1008
Tru9I	TTAA	4 cut(s)	732, 753, 929, 1008
TscAI	CASTG	1 cut(s)	1125
TseFI	GTSAC	2 cut(s)	541, 554
TseI	GCWGC	1 cut(s)	344
Tsp45I	GTSAC	2 cut(s)	541, 554
TspDTI	ATGAA	3 cut(s)	17, 461, 486
TspMI	CCCGGG	1 cut(s)	522
TspRI	CASTG	1 cut(s)	1125
Tth111I	GACNNNGTC	1 cut(s)	145
VpaK11BI	GGWCC	1 cut(s)	32
VspI	ATTAAT	1 cut(s)	929
XagI	CCTNNNNNAGG	1 cut(s)	95
XapI	RAATTY	1 cut(s)	820
XbaI	TCTAGA	2 cut(s)	877, 1000
XceI	RCATGY	2 cut(s)	597, 920
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1142
XmaI	CCCGGG	1 cut(s)	522
XmaJI	CCTAGG	1 cut(s)	175
XmnI	GAANNNNTTC	1 cut(s)	493
XspI	CTAG	5 cut(s)	176, 348, 795, 878, 1001
ZraI	GACGTC	1 cut(s)	220
Zsp2I	ATGCAT	2 cut(s)	595, 599

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.