Homeodomain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 525 |
| AciI | CCGC | 1 cut(s) | 451 |
| AcoI | YGGCCR | 1 cut(s) | 94 |
| AcsI | RAATTY | 1 cut(s) | 62 |
| AcuI | CTGAAG | 1 cut(s) | 354 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 155 |
| AgsI | TTSAA | 6 cut(s) | 68, 155, 249, 292, 297, 416 |
| AluBI | AGCT | 5 cut(s) | 124, 270, 338, 359, 481 |
| AluI | AGCT | 5 cut(s) | 124, 270, 338, 359, 481 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 326 |
| AoxI | GGCC | 1 cut(s) | 94 |
| ApeKI | GCWGC | 1 cut(s) | 41 |
| ApoI | RAATTY | 1 cut(s) | 62 |
| AsuHPI | GGTGA | 1 cut(s) | 431 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 439, 472 |
| BbvI | GCAGC | 1 cut(s) | 53 |
| BciVI | GTATCC | 1 cut(s) | 467 |
| BfmI | CTRYAG | 1 cut(s) | 406 |
| BfuI | GTATCC | 1 cut(s) | 467 |
| BisI | GCNGC | 1 cut(s) | 42 |
| BlsI | GCNGC | 1 cut(s) | 43 |
| BmsI | GCATC | 3 cut(s) | 33, 96, 151 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 155 |
| BseGI | GGATG | 1 cut(s) | 166 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BseXI | GCAGC | 1 cut(s) | 53 |
| Bsh1285I | CGRYCG | 1 cut(s) | 451 |
| BshFI | GGCC | 1 cut(s) | 96 |
| BsiEI | CGRYCG | 1 cut(s) | 451 |
| BslFI | GGGAC | 1 cut(s) | 212 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BsmFI | GGGAC | 1 cut(s) | 212 |
| BsnI | GGCC | 1 cut(s) | 96 |
| Bsp143I | GATC | 1 cut(s) | 232 |
| BspACI | CCGC | 1 cut(s) | 451 |
| BspANI | GGCC | 1 cut(s) | 96 |
| BssMI | GATC | 1 cut(s) | 232 |
| Bst6I | CTCTTC | 1 cut(s) | 411 |
| BstC8I | GCNNGC | 1 cut(s) | 312 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 153 |
| BstF5I | GGATG | 1 cut(s) | 166 |
| BstKTI | GATC | 1 cut(s) | 235 |
| BstMBI | GATC | 1 cut(s) | 232 |
| BstMCI | CGRYCG | 1 cut(s) | 451 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 41, 93, 170, 365 |
| BstSFI | CTRYAG | 1 cut(s) | 406 |
| BstV1I | GCAGC | 1 cut(s) | 53 |
| BsuI | GTATCC | 1 cut(s) | 467 |
| BsuRI | GGCC | 1 cut(s) | 96 |
| BtsCI | GGATG | 1 cut(s) | 166 |
| Cac8I | GCNNGC | 1 cut(s) | 312 |
| CaiI | CAGNNNCTG | 1 cut(s) | 326 |
| CviAII | CATG | 5 cut(s) | 83, 178, 425, 434, 507 |
| CviJI | RGCY | 8 cut(s) | 96, 124, 140, 270, 338, 359, 476, 481 |
| CviKI_1 | RGCY | 8 cut(s) | 96, 124, 140, 270, 338, 359, 476, 481 |
| DpnI | GATC | 1 cut(s) | 234 |
| DpnII | GATC | 1 cut(s) | 232 |
| EaeI | YGGCCR | 1 cut(s) | 94 |
| Eam1104I | CTCTTC | 1 cut(s) | 411 |
| EarI | CTCTTC | 1 cut(s) | 411 |
| Eco57I | CTGAAG | 1 cut(s) | 354 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 153 |
| FaeI | CATG | 5 cut(s) | 86, 181, 428, 437, 510 |
| FaqI | GGGAC | 1 cut(s) | 212 |
| FatI | CATG | 5 cut(s) | 82, 177, 424, 433, 506 |
| Fnu4HI | GCNGC | 1 cut(s) | 42 |
| FokI | GGATG | 1 cut(s) | 173 |
| Fsp4HI | GCNGC | 1 cut(s) | 42 |
| GluI | GCNGC | 1 cut(s) | 42 |
| HaeIII | GGCC | 1 cut(s) | 96 |
| Hin1II | CATG | 5 cut(s) | 86, 181, 428, 437, 510 |
| HindIII | AAGCTT | 1 cut(s) | 268 |
| HinfI | GANTC | 2 cut(s) | 99, 323 |
| HphI | GGTGA | 1 cut(s) | 431 |
| Hpy188I | TCNGA | 5 cut(s) | 130, 328, 373, 448, 461 |
| Hpy188III | TCNNGA | 3 cut(s) | 236, 397, 413 |
| HpyAV | CCTTC | 1 cut(s) | 149 |
| HpyCH4V | TGCA | 7 cut(s) | 35, 173, 256, 286, 303, 314, 353 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 41, 93, 170, 365 |
| Hsp92II | CATG | 5 cut(s) | 86, 181, 428, 437, 510 |
| Kzo9I | GATC | 1 cut(s) | 232 |
| LmnI | GCTCC | 2 cut(s) | 181, 486 |
| LpnPI | CCDG | 6 cut(s) | 78, 150, 162, 221, 302, 455 |
| Lsp1109I | GCAGC | 1 cut(s) | 53 |
| LweI | GCATC | 3 cut(s) | 33, 96, 151 |
| MalI | GATC | 1 cut(s) | 234 |
| MboI | GATC | 1 cut(s) | 232 |
| MboII | GAAGA | 1 cut(s) | 428 |
| MluCI | AATT | 4 cut(s) | 62, 251, 292, 297 |
| MmeI | TCCRAC | 1 cut(s) | 471 |
| MnlI | CCTC | 1 cut(s) | 412 |
| MseI | TTAA | 5 cut(s) | 56, 212, 222, 534, 547 |
| MslI | CAYNNNNRTG | 1 cut(s) | 81 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 41, 93, 170, 365 |
| NdeII | GATC | 1 cut(s) | 232 |
| NlaIII | CATG | 5 cut(s) | 86, 181, 428, 437, 510 |
| PfeI | GAWTC | 2 cut(s) | 99, 323 |
| PkrI | GCNGC | 1 cut(s) | 43 |
| PsiI | TTATAA | 1 cut(s) | 525 |
| PstNI | CAGNNNCTG | 1 cut(s) | 326 |
| RseI | CAYNNNNRTG | 1 cut(s) | 81 |
| SaqAI | TTAA | 5 cut(s) | 56, 212, 222, 534, 547 |
| SatI | GCNGC | 1 cut(s) | 42 |
| Sau3AI | GATC | 1 cut(s) | 232 |
| SetI | ASST | 6 cut(s) | 117, 126, 272, 340, 361, 483 |
| SfaNI | GCATC | 3 cut(s) | 33, 96, 151 |
| SfcI | CTRYAG | 1 cut(s) | 406 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 81 |
| Sse9I | AATT | 4 cut(s) | 62, 251, 292, 297 |
| SsiI | CCGC | 1 cut(s) | 451 |
| TasI | AATT | 4 cut(s) | 62, 251, 292, 297 |
| TfiI | GAWTC | 2 cut(s) | 99, 323 |
| Tru1I | TTAA | 5 cut(s) | 56, 212, 222, 534, 547 |
| Tru9I | TTAA | 5 cut(s) | 56, 212, 222, 534, 547 |
| TseI | GCWGC | 1 cut(s) | 41 |
| TspDTI | ATGAA | 4 cut(s) | 39, 91, 150, 441 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 153 |
| XapI | RAATTY | 1 cut(s) | 62 |