Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001049

Physical Location & Seq

Genomic Coordinates Reverse (-)

37641059 .. 37645691

Gene Structure 4633 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0342000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGACGAAGAAGACAGAGAGGAAAGTGAACGTTTCCGGGAAGCCGAAGCACTCTCTGGACGCGAACCGCACGGATGGGAAGAACAAAGAGCAGCGTAGTGCGGCCACCGTGCGCCGCCTCAAGATGTACAAGGTCCGGCCCAAGCGTGACCGCAAGGGCAAGTTCATCAGCAACGAGTTCCAGTCCAAGGAGTTGCCCAACACTCGAATCCAACCCGATCGCCGCTGGTTCGGGAATACTAGGGTTGTGGGCCAGAAGGAGCTTGAAGTCTTTCGCGACGAGCTCGAGAATCACATGTCTAATAGATACAATGTGATTTTGAAGGAGAAGAAATTGCCCATGTCTCTTCTTAATGACCATAAGAAGCAATCAAGAGTTCATCTGCTTGAGAGAGAGCCGTTTTCCGATGCATTTGGACCTAAGACAAAGAGGAAGCGTCCAAAACTCTTGGCAGCTAATTACGAGTCCCTAGCTAAGAAAGCCGATGGTTCTCAGGATGTGTTTGAGCAGAAGCACGATGACATTGCTGCAGAAGCAGGCGAAGCTGATGGATTTAGGGACTTGGTTCGCCATACAATGTTTGAGAAGGGACAGAGTAAACGTATTTGGGGCGAGCTCTACAAAGTGGTCGACTCCTCAGATGTTGTTGTCCAGGTTTTGGATGCAAGGGATCCGCAAGGTACAAGATGTTACCACTTAGAGAAGCATTTGAAAGAGCATTGCAAGCATAAACACTTGATTCTCTTGTTAAACAAGTGTGATTTGGTTCCTGCTTGGGCAACAAAAGGTTGGCTAAAAGTATTGTCGGCGGAGTTTCCAACTCTTGCATTTCATGCTAGCATCAACAAGTCATTTGGCAAGGGTTCCCTTCTATCAGTGTTGAGGCAATTTTCCCGATTAAAAAGTGACAAGCAAGCAATTTCTGTGGGATTCGTTGGGTATCCCAATGTTGGAAAGTCATCTGTTATCAACACACTGCGAACGAAAAATGTTTGCAAGGTTGCTCCTATTCCAGGGGAAACGAAAGTGTGGCAATATATAACACTCACAAAGAGGATCTTCTTGATTGACTGCCCCGGAGTTGTCTATCAAACCAACGACTCTGAAACAGATATTGTACTGAAGGGCGTGGTACGTGTCACAAACTTGCAGGATGCTTCAGAACACATAGGAGAAGTTTTGAAACGAGTTAAGAAAGAGCACTTGCAAAGAGCATATAAGATAAAAGAGTGGGAGGATGATAATGACTTTCTAGTTCAGCTATGCAAATCATCCGGAAAGCTTTTGAAGGGTGGGGAACCTGACCTGATGACAGCGGCAAAGATGATCCTCCATGATTGGCAGAGGGGTAAGATACCATTTTTTGTGCCTCCTCCACAAAGAGAATTGCCATCAGAGGAGCATCCTGCCAATGAAGTAGAAAACGATACACTAATAGATAATAATCAAGCATCAGCATTTAGAGCCATTGCAAATGTTATTTCATCCCAGCAGCAAATGAATGTCCCGGTTCAAAGGGATCTTTATAACGAAAATGAGTTGAAGGAATCCAAGACGGATAACCTTCCTGAACATGATGTTGAGGCCGAGACATCTGAGAAGTCTAAGGATTCAGATAGTGAGACTTCTGAGAAGTCTGAGGACTTGGAGGATGAGGTGTCTGAACAGTCTTCTGATGCAGAGGATGAGACGTCCGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

566

Amino Acids

64.68

Weight (kDa)

8.76

Isoelectric Point (pI)

40.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NGP1NT	PF08153	42 - 166	9.1e-47	NGP1NT (NUC091) domain
MMR_HSR1	PF01926	309 - 376	5.7e-16	50S ribosome-binding GTPase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001049)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr6g0250991
rosa_rugosa	Rorug01G0009700 Rorug01G0012700 Rorug01G0053900 Rorug01G0068900 Rorug01G0087400 Rorug01G0087600 Rorug01G0093100 Rorug01G0098500 Rorug01G0140900.1 Rorug01G0147600.1 Rorug01G0148900.1 Rorug01G0186200 Rorug01G0245700 Rorug01G0262700 Rorug02G0006900 Rorug02G0154500 Rorug02G0186800 Rorug02G0203500 Rorug02G0219400 Rorug02G0252200 Rorug02G0351800 Rorug02G0525300 Rorug03G0349300 Rorug03G0353100 Rorug04G0333200 Rorug04G0379900 Rorug05G0212200 Rorug05G0217800 Rorug05G0223400 Rorug05G0287900 Rorug05G0342200 Rorug05G0373800 Rorug05G0386200 Rorug05G0396200 Rorug05G0398500 Rorug05G0398600 Rorug05G0398700 Rorug05G0398800 Rorug05G0451900 Rorug05G0485400 Rorug05G0541100 Rorug06G0124300 Rorug06G0371300 Rorug07G0094900 Rorug07G0098800 Rorug07G0098900 Rorug07G0172600 Rorug07G0253100 Rorug07G0253200 Rorug07G0267100 Rorug07G0268100 Rorug07G0270500 Rorug07G0271400 Rorug07G0311400 Rorug07G0311500 Rorug07G0311600 Rorug07G0311700 Rorug07G0311800 Rorug07G0337900 Rorug07G0342000

Species

Orthologous Gene IDs

rosa_chinensis

RchiOBHm_Chr6g0250991

rosa_rugosa

Rorug01G0009700 Rorug01G0012700 Rorug01G0053900 Rorug01G0068900 Rorug01G0087400 Rorug01G0087600 Rorug01G0093100 Rorug01G0098500 Rorug01G0140900.1 Rorug01G0147600.1 Rorug01G0148900.1 Rorug01G0186200 Rorug01G0245700 Rorug01G0262700 Rorug02G0006900 Rorug02G0154500 Rorug02G0186800 Rorug02G0203500 Rorug02G0219400 Rorug02G0252200 Rorug02G0351800 Rorug02G0525300 Rorug03G0349300 Rorug03G0353100 Rorug04G0333200 Rorug04G0379900 Rorug05G0212200 Rorug05G0217800 Rorug05G0223400 Rorug05G0287900 Rorug05G0342200 Rorug05G0373800 Rorug05G0386200 Rorug05G0396200 Rorug05G0398500 Rorug05G0398600 Rorug05G0398700 Rorug05G0398800 Rorug05G0451900 Rorug05G0485400 Rorug05G0541100 Rorug06G0124300 Rorug06G0371300 Rorug07G0094900 Rorug07G0098800 Rorug07G0098900 Rorug07G0172600 Rorug07G0253100 Rorug07G0253200 Rorug07G0267100 Rorug07G0268100 Rorug07G0270500 Rorug07G0271400 Rorug07G0311400 Rorug07G0311500 Rorug07G0311600 Rorug07G0311700 Rorug07G0311800 Rorug07G0337900 Rorug07G0342000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1527
AatII	GACGTC	1 cut(s)	1694
AccB7I	CCANNNNNTGG	1 cut(s)	658
AccI	GTMKAC	1 cut(s)	630
AccII	CGCG	2 cut(s)	62, 276
AccIII	TCCGGA	1 cut(s)	1274
AciI	CCGC	8 cut(s)	67, 101, 115, 151, 223, 674, 809, 1316
AclI	AACGTT	1 cut(s)	30
AclWI	GGATC	5 cut(s)	665, 678, 1064, 1321, 1527
AcoI	YGGCCR	1 cut(s)	102
AcuI	CTGAAG	2 cut(s)	1142, 1143
AcyI	GRCGYC	1 cut(s)	1691
AfaI	GTAC	4 cut(s)	128, 682, 1119, 1134
AfiI	CCNNNNNNNGG	4 cut(s)	187, 658, 950, 1013
AflIII	ACRYGT	2 cut(s)	294, 1135
AgsI	TTSAA	7 cut(s)	266, 322, 712, 1183, 1288, 1514, 1543
AjnI	CCWGG	2 cut(s)	651, 1012
AluBI	AGCT	8 cut(s)	262, 283, 455, 473, 545, 616, 1261, 1282
AluI	AGCT	8 cut(s)	262, 283, 455, 473, 545, 616, 1261, 1282
Alw21I	GWGCWC	3 cut(s)	285, 618, 1203
Alw26I	GTCTC	4 cut(s)	348, 1583, 1616, 1682
AlwI	GGATC	5 cut(s)	665, 678, 1064, 1321, 1527
Ama87I	CYCGRG	1 cut(s)	284
Aor13HI	TCCGGA	1 cut(s)	1274
AoxI	GGCC	4 cut(s)	102, 137, 250, 1584
ApeKI	GCWGC	4 cut(s)	91, 452, 527, 1492
Asp700I	GAANNNNTTC	1 cut(s)	270
AspLEI	GCGC	1 cut(s)	114
AspS9I	GGNCC	4 cut(s)	133, 138, 250, 416
AsuC2I	CCSGG	3 cut(s)	37, 1077, 1508
AsuNHI	GCTAGC	1 cut(s)	836
AvaI	CYCGRG	1 cut(s)	284
AvaII	GGWCC	2 cut(s)	133, 416
BamHI	GGATCC	1 cut(s)	670
BanII	GRGCYC	2 cut(s)	285, 618
BbsI	GAAGAC	2 cut(s)	17, 1662
Bbv12I	GWGCWC	3 cut(s)	285, 618, 1203
BbvI	GCAGC	4 cut(s)	103, 464, 514, 1504
BccI	CCATC	4 cut(s)	68, 479, 542, 1399
BceAI	ACGGC	1 cut(s)	382
BcgI	CGANNNNNNTGC	2 cut(s)	506, 540
BciT130I	CCWGG	2 cut(s)	653, 1014
BciVI	GTATCC	1 cut(s)	951
BcnI	CCSGG	3 cut(s)	37, 1077, 1508
BcoDI	GTCTC	4 cut(s)	348, 1583, 1616, 1682
BfaI	CTAG	4 cut(s)	240, 470, 837, 1253
BfmI	CTRYAG	1 cut(s)	528
BfuI	GTATCC	1 cut(s)	951
BisI	GCNGC	8 cut(s)	92, 102, 115, 223, 453, 528, 1317, 1493
BlsI	GCNGC	8 cut(s)	93, 103, 116, 224, 454, 529, 1318, 1494
Bme1390I	CCNGG	5 cut(s)	37, 653, 1014, 1077, 1508
Bme18I	GGWCC	2 cut(s)	133, 416
BmeT110I	CYCGRG	1 cut(s)	284
BmgT120I	GGNCC	4 cut(s)	133, 138, 250, 416
BmiI	GGNNCC	4 cut(s)	672, 768, 865, 1299
BmrFI	CCNGG	5 cut(s)	37, 653, 1014, 1077, 1508
BmsI	GCATC	7 cut(s)	397, 652, 849, 1144, 1411, 1460, 1666
BmtI	GCTAGC	1 cut(s)	840
BpiI	GAAGAC	2 cut(s)	17, 1662
BpuEI	CTTGAG	2 cut(s)	104, 407
BpuMI	CCSGG	3 cut(s)	37, 1077, 1508
BsaAI	YACGTR	1 cut(s)	1136
BsaBI	GATNNNNATC	1 cut(s)	1443
BsaHI	GRCGYC	1 cut(s)	1691
BsaJI	CCNNGG	3 cut(s)	186, 1013, 1075
BsaWI	WCCGGW	1 cut(s)	1274
Bsc4I	CCNNNNNNNGG	4 cut(s)	187, 658, 950, 1013
Bse1I	ACTGG	1 cut(s)	181
Bse3DI	GCAATG	3 cut(s)	522, 718, 1467
Bse8I	GATNNNNATC	1 cut(s)	1443
BseAI	TCCGGA	1 cut(s)	1274
BseBI	CCWGG	2 cut(s)	653, 1014
BseDI	CCNNGG	3 cut(s)	186, 1013, 1075
BseJI	GATNNNNATC	1 cut(s)	1443
BseLI	CCNNNNNNNGG	4 cut(s)	187, 658, 950, 1013
BseMI	GCAATG	3 cut(s)	522, 718, 1467
BseMII	CTCAG	5 cut(s)	506, 651, 1587, 1620, 1629
BseNI	ACTGG	1 cut(s)	181
BseRI	GAGGAG	3 cut(s)	625, 1362, 1412
BseXI	GCAGC	4 cut(s)	103, 464, 514, 1504
BseYI	CCCAGC	1 cut(s)	1488
Bsh1236I	CGCG	2 cut(s)	62, 276
Bsh1285I	CGRYCG	1 cut(s)	220
BshFI	GGCC	4 cut(s)	104, 139, 252, 1586
BsiEI	CGRYCG	1 cut(s)	220
BsiHKAI	GWGCWC	3 cut(s)	285, 618, 1203
BsiHKCI	CYCGRG	1 cut(s)	284
BsiSI	CCGG	5 cut(s)	36, 136, 1077, 1275, 1508
BslFI	GGGAC	4 cut(s)	451, 572, 603, 1490
BslI	CCNNNNNNNGG	4 cut(s)	187, 658, 950, 1013
BsmAI	GTCTC	4 cut(s)	348, 1583, 1616, 1682
BsmBI	CGTCTC	1 cut(s)	1682
BsmFI	GGGAC	4 cut(s)	451, 572, 603, 1490
BsnI	GGCC	4 cut(s)	104, 139, 252, 1586
BsoBI	CYCGRG	1 cut(s)	284
Bsp1286I	GDGCHC	3 cut(s)	285, 618, 1203
Bsp13I	TCCGGA	1 cut(s)	1274
Bsp1407I	TGTACA	1 cut(s)	126
Bsp143I	GATC	5 cut(s)	217, 670, 1056, 1326, 1519
Bsp68I	TCGCGA	1 cut(s)	276
BspACI	CCGC	8 cut(s)	67, 101, 115, 151, 223, 674, 809, 1316
BspANI	GGCC	4 cut(s)	104, 139, 252, 1586
BspCNI	CTCAG	5 cut(s)	505, 650, 1588, 1621, 1630
BspEI	TCCGGA	1 cut(s)	1274
BspFNI	CGCG	2 cut(s)	62, 276
BspLI	GGNNCC	4 cut(s)	672, 768, 865, 1299
BspMAI	CTGCAG	1 cut(s)	532
BspOI	GCTAGC	1 cut(s)	840
BspPI	GGATC	5 cut(s)	665, 678, 1064, 1321, 1527
BsrDI	GCAATG	3 cut(s)	522, 718, 1467
BsrGI	TGTACA	1 cut(s)	126
BsrI	ACTGG	1 cut(s)	181
BssECI	CCNNGG	3 cut(s)	186, 1013, 1075
BssMI	GATC	5 cut(s)	217, 670, 1056, 1326, 1519
BssNI	GRCGYC	1 cut(s)	1691
BssT1I	CCWWGG	1 cut(s)	186
Bst2UI	CCWGG	2 cut(s)	653, 1014
Bst4CI	ACNGT	2 cut(s)	109, 1668
Bst6I	CTCTTC	1 cut(s)	351
BstACI	GRCGYC	1 cut(s)	1691
BstAPI	GCANNNNNTGC	1 cut(s)	833
BstAUI	TGTACA	1 cut(s)	126
BstBAI	YACGTR	1 cut(s)	1136
BstC8I	GCNNGC	5 cut(s)	538, 614, 725, 838, 915
BstDEI	CTNAG	9 cut(s)	420, 474, 492, 637, 697, 1596, 1605, 1629, 1638
BstENI	CCTNNNNNAGG	1 cut(s)	1011
BstFNI	CGCG	2 cut(s)	62, 276
BstHHI	GCGC	1 cut(s)	114
BstKTI	GATC	5 cut(s)	220, 673, 1059, 1329, 1522
BstMAI	GTCTC	4 cut(s)	348, 1583, 1616, 1682
BstMBI	GATC	5 cut(s)	217, 670, 1056, 1326, 1519
BstMCI	CGRYCG	1 cut(s)	220
BstMWI	GCNNNNNNNGC	6 cut(s)	479, 533, 542, 724, 833, 1463
BstNI	CCWGG	2 cut(s)	653, 1014
BstNSI	RCATGY	1 cut(s)	298
BstSCI	CCNGG	5 cut(s)	35, 651, 1012, 1075, 1506
BstSFI	CTRYAG	1 cut(s)	528
BstUI	CGCG	2 cut(s)	62, 276
BstV1I	GCAGC	4 cut(s)	103, 464, 514, 1504
BstV2I	GAAGAC	2 cut(s)	17, 1662
BstX2I	RGATCY	3 cut(s)	670, 1056, 1519
BstYI	RGATCY	3 cut(s)	670, 1056, 1519
BsuI	GTATCC	1 cut(s)	951
BsuRI	GGCC	4 cut(s)	104, 139, 252, 1586
BtsI	GCAGTG	1 cut(s)	974
BtsIMutI	CAGTG	2 cut(s)	882, 974
BtuMI	TCGCGA	1 cut(s)	276
Cac8I	GCNNGC	5 cut(s)	538, 614, 725, 838, 915
CfoI	GCGC	1 cut(s)	114
Cfr13I	GGNCC	4 cut(s)	133, 138, 250, 416
CseI	GACGC	2 cut(s)	68, 425
Csp6I	GTAC	4 cut(s)	127, 681, 1118, 1133
CspCI	CAANNNNNGTGG	2 cut(s)	906, 941
CviAII	CATG	5 cut(s)	295, 340, 833, 1334, 1574
CviQI	GTAC	4 cut(s)	127, 681, 1118, 1133
DdeI	CTNAG	9 cut(s)	420, 474, 492, 637, 697, 1596, 1605, 1629, 1638
DpnI	GATC	5 cut(s)	219, 672, 1058, 1328, 1521
DpnII	GATC	5 cut(s)	217, 670, 1056, 1326, 1519
EaeI	YGGCCR	1 cut(s)	102
Eam1104I	CTCTTC	1 cut(s)	351
EarI	CTCTTC	1 cut(s)	351
EciI	GGCGGA	1 cut(s)	824
Ecl136II	GAGCTC	2 cut(s)	283, 616
Eco130I	CCWWGG	1 cut(s)	186
Eco24I	GRGCYC	2 cut(s)	285, 618
Eco47I	GGWCC	2 cut(s)	133, 416
Eco53kI	GAGCTC	2 cut(s)	283, 616
Eco57I	CTGAAG	2 cut(s)	1142, 1143
Eco88I	CYCGRG	1 cut(s)	284
EcoICRI	GAGCTC	2 cut(s)	283, 616
EcoNI	CCTNNNNNAGG	1 cut(s)	1011
EcoRII	CCWGG	2 cut(s)	651, 1012
EcoT14I	CCWWGG	1 cut(s)	186
EcoT22I	ATGCAT	1 cut(s)	412
EcoT38I	GRGCYC	2 cut(s)	285, 618
ErhI	CCWWGG	1 cut(s)	186
Esp3I	CGTCTC	1 cut(s)	1682
FaeI	CATG	5 cut(s)	298, 343, 836, 1337, 1577
FalI	AAGNNNNNCTT	2 cut(s)	1043, 1075
FaqI	GGGAC	4 cut(s)	451, 572, 603, 1490
FatI	CATG	5 cut(s)	294, 339, 832, 1333, 1573
FblI	GTMKAC	1 cut(s)	630
Fnu4HI	GCNGC	8 cut(s)	92, 102, 115, 223, 453, 528, 1317, 1493
FriOI	GRGCYC	2 cut(s)	285, 618
Fsp4HI	GCNGC	8 cut(s)	92, 102, 115, 223, 453, 528, 1317, 1493
FspBI	CTAG	4 cut(s)	240, 470, 837, 1253
GlaI	GCGC	1 cut(s)	113
GluI	GCNGC	8 cut(s)	92, 102, 115, 223, 453, 528, 1317, 1493
GsaI	CCCAGC	1 cut(s)	1492
HaeIII	GGCC	4 cut(s)	104, 139, 252, 1586
HapII	CCGG	5 cut(s)	36, 136, 1077, 1275, 1508
HgaI	GACGC	2 cut(s)	68, 425
HhaI	GCGC	1 cut(s)	114
Hin1I	GRCGYC	1 cut(s)	1691
Hin1II	CATG	5 cut(s)	298, 343, 836, 1337, 1577
Hin6I	GCGC	1 cut(s)	112
HinP1I	GCGC	1 cut(s)	112
HincII	GTYRAC	1 cut(s)	631
HindII	GTYRAC	1 cut(s)	631
HindIII	AAGCTT	1 cut(s)	1280
HinfI	GANTC	9 cut(s)	207, 289, 464, 632, 739, 930, 1100, 1547, 1610
HpaII	CCGG	5 cut(s)	36, 136, 1077, 1275, 1508
Hpy166II	GTNNAC	3 cut(s)	28, 599, 631
Hpy8I	GTNNAC	3 cut(s)	28, 599, 631
Hpy99I	CGWCG	1 cut(s)	281
HpyAV	CCTTC	8 cut(s)	250, 316, 580, 878, 1117, 1282, 1537, 1574
HpyCH4III	ACNGT	2 cut(s)	109, 1668
HpyCH4IV	ACGT	4 cut(s)	30, 601, 1135, 1691
HpyF10VI	GCNNNNNNNGC	6 cut(s)	479, 533, 542, 724, 833, 1463
HpyF3I	CTNAG	9 cut(s)	420, 474, 492, 637, 697, 1596, 1605, 1629, 1638
HpySE526I	ACGT	4 cut(s)	30, 601, 1135, 1691
Hsp92I	GRCGYC	1 cut(s)	1691
Hsp92II	CATG	5 cut(s)	298, 343, 836, 1337, 1577
HspAI	GCGC	1 cut(s)	112
Kpn2I	TCCGGA	1 cut(s)	1274
Kzo9I	GATC	5 cut(s)	217, 670, 1056, 1326, 1519
LmnI	GCTCC	3 cut(s)	259, 1009, 1399
Lsp1109I	GCAGC	4 cut(s)	103, 464, 514, 1504
LweI	GCATC	7 cut(s)	397, 652, 849, 1144, 1411, 1460, 1666
MaeI	CTAG	4 cut(s)	240, 470, 837, 1253
MaeII	ACGT	4 cut(s)	30, 601, 1135, 1691
MaeIII	GTNAC	4 cut(s)	146, 689, 905, 1138
MalI	GATC	5 cut(s)	219, 672, 1058, 1328, 1521
MboI	GATC	5 cut(s)	217, 670, 1056, 1326, 1519
MboII	GAAGA	7 cut(s)	19, 22, 91, 338, 340, 1051, 1662
MflI	RGATCY	3 cut(s)	670, 1056, 1519
MhlI	GDGCHC	3 cut(s)	285, 618, 1203
MluCI	AATT	5 cut(s)	332, 457, 887, 918, 1385
MlyI	GAGTC	3 cut(s)	473, 626, 1094
MmeI	TCCRAC	3 cut(s)	235, 842, 931
Mph1103I	ATGCAT	1 cut(s)	412
MroI	TCCGGA	1 cut(s)	1274
MroXI	GAANNNNTTC	1 cut(s)	270
MseI	TTAA	4 cut(s)	351, 749, 899, 1191
MspA1I	CMGCKG	2 cut(s)	225, 1316
MspI	CCGG	5 cut(s)	36, 136, 1077, 1275, 1508
MspR9I	CCNGG	5 cut(s)	37, 653, 1014, 1077, 1508
MvaI	CCWGG	2 cut(s)	653, 1014
MvnI	CGCG	2 cut(s)	62, 276
MwoI	GCNNNNNNNGC	6 cut(s)	479, 533, 542, 724, 833, 1463
NciI	CCSGG	3 cut(s)	37, 1077, 1508
NdeII	GATC	5 cut(s)	217, 670, 1056, 1326, 1519
NheI	GCTAGC	1 cut(s)	836
NlaIII	CATG	5 cut(s)	298, 343, 836, 1337, 1577
NlaIV	GGNNCC	4 cut(s)	672, 768, 865, 1299
NmeAIII	GCCGAG	1 cut(s)	1612
NmuCI	GTSAC	3 cut(s)	146, 905, 1138
NruI	TCGCGA	1 cut(s)	276
NsiI	ATGCAT	1 cut(s)	412
NspI	RCATGY	1 cut(s)	298
PaeR7I	CTCGAG	1 cut(s)	284
PciI	ACATGT	1 cut(s)	294
PdmI	GAANNNNTTC	1 cut(s)	270
PfeI	GAWTC	6 cut(s)	207, 289, 739, 930, 1547, 1610
PflMI	CCANNNNNTGG	1 cut(s)	658
PfoI	TCCNGGA	1 cut(s)	35
PkrI	GCNGC	8 cut(s)	93, 103, 116, 224, 454, 529, 1318, 1494
Ple19I	CGATCG	1 cut(s)	220
PleI	GAGTC	3 cut(s)	472, 626, 1094
PpsI	GAGTC	3 cut(s)	472, 626, 1094
Ppu21I	YACGTR	1 cut(s)	1136
PscI	ACATGT	1 cut(s)	294
PsiI	TTATAA	1 cut(s)	1527
Psp124BI	GAGCTC	2 cut(s)	285, 618
Psp1406I	AACGTT	1 cut(s)	30
Psp6I	CCWGG	2 cut(s)	651, 1012
PspFI	CCCAGC	1 cut(s)	1488
PspGI	CCWGG	2 cut(s)	651, 1012
PspN4I	GGNNCC	4 cut(s)	672, 768, 865, 1299
PspPI	GGNCC	4 cut(s)	133, 138, 250, 416
PstI	CTGCAG	1 cut(s)	532
PsuI	RGATCY	3 cut(s)	670, 1056, 1519
PvuI	CGATCG	1 cut(s)	220
RruI	TCGCGA	1 cut(s)	276
RsaI	GTAC	4 cut(s)	128, 682, 1119, 1134
RsaNI	GTAC	4 cut(s)	127, 681, 1118, 1133
SacI	GAGCTC	2 cut(s)	285, 618
SalI	GTCGAC	1 cut(s)	629
SaqAI	TTAA	4 cut(s)	351, 749, 899, 1191
SatI	GCNGC	8 cut(s)	92, 102, 115, 223, 453, 528, 1317, 1493
Sau3AI	GATC	5 cut(s)	217, 670, 1056, 1326, 1519
Sau96I	GGNCC	4 cut(s)	133, 138, 250, 416
SchI	GAGTC	3 cut(s)	473, 626, 1094
ScrFI	CCNGG	5 cut(s)	37, 653, 1014, 1077, 1508
SduI	GDGCHC	3 cut(s)	285, 618, 1203
SfaNI	GCATC	7 cut(s)	397, 652, 849, 1144, 1411, 1460, 1666
SfcI	CTRYAG	1 cut(s)	528
Sfr274I	CTCGAG	1 cut(s)	284
SinI	GGWCC	2 cut(s)	133, 416
SlaI	CTCGAG	1 cut(s)	284
SmlI	CTYRAG	3 cut(s)	119, 284, 386
SmoI	CTYRAG	3 cut(s)	119, 284, 386
Sse9I	AATT	5 cut(s)	332, 457, 887, 918, 1385
SsiI	CCGC	8 cut(s)	67, 101, 115, 151, 223, 674, 809, 1316
SspMI	CTAG	4 cut(s)	240, 470, 837, 1253
SstI	GAGCTC	2 cut(s)	285, 618
StyD4I	CCNGG	5 cut(s)	35, 651, 1012, 1075, 1506
StyI	CCWWGG	1 cut(s)	186
TaaI	ACNGT	2 cut(s)	109, 1668
TaiI	ACGT	4 cut(s)	33, 604, 1138, 1694
TaqI	TCGA	3 cut(s)	205, 285, 630
TasI	AATT	5 cut(s)	332, 457, 887, 918, 1385
TatI	WGTACW	2 cut(s)	126, 1117
TauI	GCSGC	4 cut(s)	104, 117, 225, 1319
TfiI	GAWTC	6 cut(s)	207, 289, 739, 930, 1547, 1610
Tru1I	TTAA	4 cut(s)	351, 749, 899, 1191
Tru9I	TTAA	4 cut(s)	351, 749, 899, 1191
TscAI	CASTG	2 cut(s)	882, 981
TseFI	GTSAC	3 cut(s)	146, 905, 1138
TseI	GCWGC	4 cut(s)	91, 452, 527, 1492
Tsp45I	GTSAC	3 cut(s)	146, 905, 1138
TspDTI	ATGAA	6 cut(s)	154, 368, 821, 1428, 1473, 1514
TspGWI	ACGGA	2 cut(s)	86, 1571
TspRI	CASTG	2 cut(s)	882, 981
Van91I	CCANNNNNTGG	1 cut(s)	658
VpaK11BI	GGWCC	2 cut(s)	133, 416
XagI	CCTNNNNNAGG	1 cut(s)	1011
XceI	RCATGY	1 cut(s)	298
XhoI	CTCGAG	1 cut(s)	284
XmiI	GTMKAC	1 cut(s)	630
XmnI	GAANNNNTTC	1 cut(s)	270
XspI	CTAG	4 cut(s)	240, 470, 837, 1253
ZraI	GACGTC	1 cut(s)	1692
Zsp2I	ATGCAT	1 cut(s)	412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.