Subtilisin-like serine endopeptidase family protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DNMT1-RFD | PF12047 | 113 - 243 | 6.3e-30 | Cytosine specific DNA methyltransferase replication foci domain |
| DNMT1-RFD | PF12047 | 414 - 570 | 2.8e-31 | Cytosine specific DNA methyltransferase replication foci domain |
| BAH | PF01426 | 767 - 898 | 6e-19 | BAH domain |
| BAH | PF01426 | 941 - 1079 | 1e-25 | BAH domain |
| DNA_methylase | PF00145 | 1124 - 1551 | 8.4e-48 | C-5 cytosine-specific DNA methylase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 431 |
| AatII | GACGTC | 1 cut(s) | 2387 |
| AccB1I | GGYRCC | 3 cut(s) | 1441, 1875, 4079 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2941, 3723 |
| AccBSI | CCGCTC | 1 cut(s) | 738 |
| AccI | GTMKAC | 3 cut(s) | 2805, 2987, 3069 |
| AccII | CGCG | 1 cut(s) | 646 |
| AciI | CCGC | 4 cut(s) | 9, 12, 738, 3960 |
| AclWI | GGATC | 7 cut(s) | 13, 264, 1739, 2342, 2437, 3200, 4454 |
| AcoI | YGGCCR | 3 cut(s) | 127, 3782, 3986 |
| AcuI | CTGAAG | 3 cut(s) | 945, 2191, 3058 |
| AcyI | GRCGYC | 1 cut(s) | 2384 |
| AflII | CTTAAG | 1 cut(s) | 3224 |
| AflIII | ACRYGT | 2 cut(s) | 1252, 2373 |
| AgeI | ACCGGT | 2 cut(s) | 998, 4076 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3846 |
| AjiI | CACGTC | 1 cut(s) | 1116 |
| AjnI | CCWGG | 8 cut(s) | 1553, 2059, 2991, 3684, 3798, 4126, 4291, 4503 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 46, 78, 502, 534, 2486, 2518 |
| AleI | CACNNNNGTG | 1 cut(s) | 1253 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 3306, 3338, 4596, 4628 |
| Alw21I | GWGCWC | 1 cut(s) | 4537 |
| AlwI | GGATC | 7 cut(s) | 13, 264, 1739, 2342, 2437, 3200, 4454 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1754 |
| Ama87I | CYCGRG | 2 cut(s) | 1288, 3497 |
| ApeKI | GCWGC | 9 cut(s) | 203, 206, 865, 1054, 1579, 1795, 2211, 3956, 4055 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 765, 797, 1081, 1113 |
| AseI | ATTAAT | 2 cut(s) | 1140, 3666 |
| AsiGI | ACCGGT | 2 cut(s) | 998, 4076 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2402, 3321, 3972 |
| AspLEI | GCGC | 1 cut(s) | 646 |
| AspS9I | GGNCC | 6 cut(s) | 328, 1955, 2107, 3674, 4309, 4408 |
| AsuC2I | CCSGG | 2 cut(s) | 3648, 4039 |
| AsuII | TTCGAA | 4 cut(s) | 1540, 3004, 4063, 4238 |
| AvaI | CYCGRG | 2 cut(s) | 1288, 3497 |
| AvaII | GGWCC | 4 cut(s) | 328, 1955, 2107, 4309 |
| AxyI | CCTNAGG | 1 cut(s) | 4317 |
| BaeGI | GKGCMC | 2 cut(s) | 1444, 4084 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4352, 4385 |
| BalI | TGGCCA | 1 cut(s) | 3988 |
| BamHI | GGATCC | 1 cut(s) | 5 |
| BanI | GGYRCC | 3 cut(s) | 1441, 1875, 4079 |
| BanII | GRGCYC | 1 cut(s) | 548 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 88, 120, 1405, 1437 |
| BauI | CACGAG | 1 cut(s) | 4183 |
| BbsI | GAAGAC | 7 cut(s) | 60, 361, 1038, 1413, 1844, 2166, 4671 |
| Bbv12I | GWGCWC | 1 cut(s) | 4537 |
| BbvCI | CCTCAGC | 2 cut(s) | 1020, 4464 |
| BbvI | GCAGC | 9 cut(s) | 190, 193, 852, 1041, 1591, 1807, 2223, 3968, 4042 |
| BceAI | ACGGC | 3 cut(s) | 114, 1688, 2267 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1774, 1808 |
| BciT130I | CCWGG | 8 cut(s) | 1555, 2061, 2993, 3686, 3800, 4128, 4293, 4505 |
| BciVI | GTATCC | 2 cut(s) | 1424, 2546 |
| BclI | TGATCA | 3 cut(s) | 847, 2004, 4228 |
| BcnI | CCSGG | 2 cut(s) | 3648, 4039 |
| BfaI | CTAG | 3 cut(s) | 1047, 3285, 3368 |
| BfmI | CTRYAG | 3 cut(s) | 694, 2178, 3585 |
| BfrI | CTTAAG | 1 cut(s) | 3224 |
| BfuI | GTATCC | 2 cut(s) | 1424, 2546 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2554 |
| BglII | AGATCT | 2 cut(s) | 525, 2301 |
| BmcAI | AGTACT | 2 cut(s) | 463, 4069 |
| Bme18I | GGWCC | 4 cut(s) | 328, 1955, 2107, 4309 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3846 |
| BmeT110I | CYCGRG | 2 cut(s) | 1288, 3497 |
| BmgBI | CACGTC | 1 cut(s) | 1116 |
| BmgT120I | GGNCC | 6 cut(s) | 328, 1955, 2107, 3674, 4309, 4408 |
| BmiI | GGNNCC | 8 cut(s) | 7, 330, 1443, 1877, 1956, 2238, 4081, 4190 |
| BmrI | ACTGGG | 2 cut(s) | 172, 4438 |
| BmuI | ACTGGG | 2 cut(s) | 172, 4438 |
| BpiI | GAAGAC | 7 cut(s) | 60, 361, 1038, 1413, 1844, 2166, 4671 |
| BpmI | CTGGAG | 5 cut(s) | 738, 2028, 2963, 3821, 3930 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1020, 4464 |
| Bpu14I | TTCGAA | 4 cut(s) | 1540, 3004, 4063, 4238 |
| BpuEI | CTTGAG | 5 cut(s) | 425, 1634, 3890, 4527, 4634 |
| BpuMI | CCSGG | 2 cut(s) | 3648, 4039 |
| BsaHI | GRCGYC | 1 cut(s) | 2384 |
| BsaI | GGTCTC | 1 cut(s) | 3225 |
| BsaWI | WCCGGW | 2 cut(s) | 998, 4076 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3306, 3336 |
| Bse118I | RCCGGY | 3 cut(s) | 998, 3466, 4076 |
| Bse21I | CCTNAGG | 1 cut(s) | 4317 |
| Bse3DI | GCAATG | 4 cut(s) | 1986, 3174, 3532, 4144 |
| BseBI | CCWGG | 8 cut(s) | 1555, 2061, 2993, 3686, 3800, 4128, 4293, 4505 |
| BseGI | GGATG | 9 cut(s) | 1004, 1213, 1467, 2515, 3398, 3493, 3574, 4263, 4495 |
| BseMI | GCAATG | 4 cut(s) | 1986, 3174, 3532, 4144 |
| BseRI | GAGGAG | 3 cut(s) | 2099, 2249, 3151 |
| BseSI | GKGCMC | 2 cut(s) | 1444, 4084 |
| BseXI | GCAGC | 9 cut(s) | 190, 193, 852, 1041, 1591, 1807, 2223, 3968, 4042 |
| BseYI | CCCAGC | 1 cut(s) | 2897 |
| BsgI | GTGCAG | 1 cut(s) | 4317 |
| Bsh1236I | CGCG | 1 cut(s) | 646 |
| BshNI | GGYRCC | 3 cut(s) | 1441, 1875, 4079 |
| BshTI | ACCGGT | 2 cut(s) | 998, 4076 |
| BsiHKAI | GWGCWC | 1 cut(s) | 4537 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1288, 3497 |
| BsiSI | CCGG | 6 cut(s) | 999, 3467, 3647, 3781, 4038, 4077 |
| BslFI | GGGAC | 3 cut(s) | 1968, 2036, 2893 |
| BsmBI | CGTCTC | 2 cut(s) | 1196, 2375 |
| BsmFI | GGGAC | 3 cut(s) | 1968, 2036, 2893 |
| BsmI | GAATGC | 3 cut(s) | 1073, 2581, 3755 |
| Bso31I | GGTCTC | 1 cut(s) | 3225 |
| BsoBI | CYCGRG | 2 cut(s) | 1288, 3497 |
| Bsp119I | TTCGAA | 4 cut(s) | 1540, 3004, 4063, 4238 |
| Bsp1286I | GDGCHC | 4 cut(s) | 548, 1444, 4084, 4537 |
| Bsp1407I | TGTACA | 2 cut(s) | 1275, 1774 |
| Bsp19I | CCATGG | 5 cut(s) | 904, 1723, 2407, 2549, 4364 |
| BspACI | CCGC | 4 cut(s) | 9, 12, 738, 3960 |
| BspFNI | CGCG | 1 cut(s) | 646 |
| BspHI | TCATGA | 1 cut(s) | 2830 |
| BspLI | GGNNCC | 8 cut(s) | 7, 330, 1443, 1877, 1956, 2238, 4081, 4190 |
| BspMAI | CTGCAG | 1 cut(s) | 2182 |
| BspPI | GGATC | 7 cut(s) | 13, 264, 1739, 2342, 2437, 3200, 4454 |
| BspQI | GCTCTTC | 2 cut(s) | 162, 3456 |
| BspT104I | TTCGAA | 4 cut(s) | 1540, 3004, 4063, 4238 |
| BspT107I | GGYRCC | 3 cut(s) | 1441, 1875, 4079 |
| BspTI | CTTAAG | 1 cut(s) | 3224 |
| BspTNI | GGTCTC | 1 cut(s) | 3225 |
| BsrBI | CCGCTC | 1 cut(s) | 738 |
| BsrDI | GCAATG | 4 cut(s) | 1986, 3174, 3532, 4144 |
| BsrFI | RCCGGY | 3 cut(s) | 998, 3466, 4076 |
| BsrGI | TGTACA | 2 cut(s) | 1275, 1774 |
| BssAI | RCCGGY | 3 cut(s) | 998, 3466, 4076 |
| BssNAI | GTATAC | 1 cut(s) | 2806 |
| BssNI | GRCGYC | 1 cut(s) | 2384 |
| BssSI | CACGAG | 1 cut(s) | 4183 |
| BssT1I | CCWWGG | 7 cut(s) | 904, 1723, 2407, 2549, 2763, 3504, 4364 |
| Bst1107I | GTATAC | 1 cut(s) | 2806 |
| Bst2BI | CACGAG | 1 cut(s) | 4183 |
| Bst2UI | CCWGG | 8 cut(s) | 1555, 2061, 2993, 3686, 3800, 4128, 4293, 4505 |
| BstACI | GRCGYC | 1 cut(s) | 2384 |
| BstAFI | CTTAAG | 1 cut(s) | 3224 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1457, 4079 |
| BstAUI | TGTACA | 2 cut(s) | 1275, 1774 |
| BstBI | TTCGAA | 4 cut(s) | 1540, 3004, 4063, 4238 |
| BstDSI | CCRYGG | 6 cut(s) | 904, 1723, 1940, 2407, 2549, 4364 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 2673, 3213, 4316 |
| BstF5I | GGATG | 9 cut(s) | 1004, 1213, 1467, 2515, 3398, 3493, 3574, 4263, 4495 |
| BstFNI | CGCG | 1 cut(s) | 646 |
| BstHHI | GCGC | 1 cut(s) | 646 |
| BstNI | CCWGG | 8 cut(s) | 1555, 2061, 2993, 3686, 3800, 4128, 4293, 4505 |
| BstNSI | RCATGY | 6 cut(s) | 213, 1256, 2205, 2282, 2377, 4004 |
| BstSFI | CTRYAG | 3 cut(s) | 694, 2178, 3585 |
| BstSLI | GKGCMC | 2 cut(s) | 1444, 4084 |
| BstUI | CGCG | 1 cut(s) | 646 |
| BstV1I | GCAGC | 9 cut(s) | 190, 193, 852, 1041, 1591, 1807, 2223, 3968, 4042 |
| BstV2I | GAAGAC | 7 cut(s) | 60, 361, 1038, 1413, 1844, 2166, 4671 |
| BstX2I | RGATCY | 7 cut(s) | 5, 256, 525, 2301, 2347, 2429, 4459 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 558, 4571 |
| BstYI | RGATCY | 7 cut(s) | 5, 256, 525, 2301, 2347, 2429, 4459 |
| BstZ17I | GTATAC | 1 cut(s) | 2806 |
| Bsu36I | CCTNAGG | 1 cut(s) | 4317 |
| BsuI | GTATCC | 2 cut(s) | 1424, 2546 |
| BtgI | CCRYGG | 6 cut(s) | 904, 1723, 1940, 2407, 2549, 4364 |
| BtgZI | GCGATG | 2 cut(s) | 247, 1560 |
| BtrI | CACGTC | 1 cut(s) | 1116 |
| BtsCI | GGATG | 9 cut(s) | 1004, 1213, 1467, 2515, 3398, 3493, 3574, 4263, 4495 |
| BtsI | GCAGTG | 5 cut(s) | 766, 876, 2221, 2451, 4665 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1754 |
| CciI | TCATGA | 1 cut(s) | 2830 |
| CfoI | GCGC | 1 cut(s) | 646 |
| Cfr10I | RCCGGY | 3 cut(s) | 998, 3466, 4076 |
| Cfr13I | GGNCC | 6 cut(s) | 328, 1955, 2107, 3674, 4309, 4408 |
| CseI | GACGC | 2 cut(s) | 1043, 4339 |
| CspAI | ACCGGT | 2 cut(s) | 998, 4076 |
| DraI | TTTAAA | 1 cut(s) | 2776 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3846 |
| EaeI | YGGCCR | 3 cut(s) | 127, 3782, 3986 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3846 |
| Eco130I | CCWWGG | 7 cut(s) | 904, 1723, 2407, 2549, 2763, 3504, 4364 |
| Eco24I | GRGCYC | 1 cut(s) | 548 |
| Eco31I | GGTCTC | 1 cut(s) | 3225 |
| Eco32I | GATATC | 1 cut(s) | 967 |
| Eco47I | GGWCC | 4 cut(s) | 328, 1955, 2107, 4309 |
| Eco57I | CTGAAG | 3 cut(s) | 945, 2191, 3058 |
| Eco81I | CCTNAGG | 1 cut(s) | 4317 |
| Eco88I | CYCGRG | 2 cut(s) | 1288, 3497 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 2673, 3213, 4316 |
| EcoO109I | RGGNCCY | 5 cut(s) | 328, 1955, 3674, 4309, 4408 |
| EcoRI | GAATTC | 3 cut(s) | 2143, 2782, 4512 |
| EcoRII | CCWGG | 8 cut(s) | 1553, 2059, 2991, 3684, 3798, 4126, 4291, 4503 |
| EcoRV | GATATC | 1 cut(s) | 967 |
| EcoT14I | CCWWGG | 7 cut(s) | 904, 1723, 2407, 2549, 2763, 3504, 4364 |
| EcoT22I | ATGCAT | 1 cut(s) | 4002 |
| EcoT38I | GRGCYC | 1 cut(s) | 548 |
| ErhI | CCWWGG | 7 cut(s) | 904, 1723, 2407, 2549, 2763, 3504, 4364 |
| Esp3I | CGTCTC | 2 cut(s) | 1196, 2375 |
| FaqI | GGGAC | 3 cut(s) | 1968, 2036, 2893 |
| FbaI | TGATCA | 3 cut(s) | 847, 2004, 4228 |
| FblI | GTMKAC | 3 cut(s) | 2805, 2987, 3069 |
| FokI | GGATG | 9 cut(s) | 991, 1220, 1454, 2522, 3405, 3480, 3581, 4250, 4482 |
| FriOI | GRGCYC | 1 cut(s) | 548 |
| FspBI | CTAG | 3 cut(s) | 1047, 3285, 3368 |
| GlaI | GCGC | 1 cut(s) | 645 |
| GsaI | CCCAGC | 1 cut(s) | 2901 |
| GsuI | CTGGAG | 5 cut(s) | 738, 2028, 2963, 3821, 3930 |
| HapII | CCGG | 6 cut(s) | 999, 3467, 3647, 3781, 4038, 4077 |
| HgaI | GACGC | 2 cut(s) | 1043, 4339 |
| HhaI | GCGC | 1 cut(s) | 646 |
| Hin1I | GRCGYC | 1 cut(s) | 2384 |
| Hin6I | GCGC | 1 cut(s) | 644 |
| HinP1I | GCGC | 1 cut(s) | 644 |
| HincII | GTYRAC | 1 cut(s) | 1225 |
| HindII | GTYRAC | 1 cut(s) | 1225 |
| HindIII | AAGCTT | 2 cut(s) | 102, 2919 |
| HpaII | CCGG | 6 cut(s) | 999, 3467, 3647, 3781, 4038, 4077 |
| Hpy166II | GTNNAC | 9 cut(s) | 664, 1225, 2494, 2806, 2988, 3070, 3241, 3658, 4354 |
| Hpy8I | GTNNAC | 9 cut(s) | 664, 1225, 2494, 2806, 2988, 3070, 3241, 3658, 4354 |
| Hpy99I | CGWCG | 1 cut(s) | 1120 |
| HpyCH4IV | ACGT | 3 cut(s) | 1096, 1115, 2384 |
| HpySE526I | ACGT | 3 cut(s) | 1096, 1115, 2384 |
| Hsp92I | GRCGYC | 1 cut(s) | 2384 |
| HspAI | GCGC | 1 cut(s) | 644 |
| KroI | GCCGGC | 1 cut(s) | 3466 |
| KroNI | GCCGGC | 1 cut(s) | 3468 |
| Ksp22I | TGATCA | 3 cut(s) | 847, 2004, 4228 |
| LguI | GCTCTTC | 2 cut(s) | 162, 3456 |
| LmnI | GCTCC | 9 cut(s) | 1306, 1514, 1781, 2063, 2236, 2813, 3166, 3911, 4142 |
| Lsp1109I | GCAGC | 9 cut(s) | 190, 193, 852, 1041, 1591, 1807, 2223, 3968, 4042 |
| MaeI | CTAG | 3 cut(s) | 1047, 3285, 3368 |
| MaeII | ACGT | 3 cut(s) | 1096, 1115, 2384 |
| MaeIII | GTNAC | 7 cut(s) | 533, 1342, 1730, 3231, 3436, 4172, 4327 |
| MbiI | CCGCTC | 1 cut(s) | 738 |
| MfeI | CAATTG | 2 cut(s) | 603, 4113 |
| MflI | RGATCY | 7 cut(s) | 5, 256, 525, 2301, 2347, 2429, 4459 |
| MhlI | GDGCHC | 4 cut(s) | 548, 1444, 4084, 4537 |
| MlsI | TGGCCA | 1 cut(s) | 3988 |
| MluNI | TGGCCA | 1 cut(s) | 3988 |
| MlyI | GAGTC | 7 cut(s) | 260, 355, 902, 1280, 3509, 3847, 4615 |
| MmeI | TCCRAC | 6 cut(s) | 234, 955, 1284, 3508, 4404, 4643 |
| Mox20I | TGGCCA | 1 cut(s) | 3988 |
| Mph1103I | ATGCAT | 1 cut(s) | 4002 |
| MroNI | GCCGGC | 1 cut(s) | 3466 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2402, 3321, 3972 |
| MscI | TGGCCA | 1 cut(s) | 3988 |
| MslI | CAYNNNNRTG | 5 cut(s) | 659, 1253, 2835, 3201, 3248 |
| Msp20I | TGGCCA | 1 cut(s) | 3988 |
| MspA1I | CMGCKG | 2 cut(s) | 865, 1798 |
| MspCI | CTTAAG | 1 cut(s) | 3224 |
| MspI | CCGG | 6 cut(s) | 999, 3467, 3647, 3781, 4038, 4077 |
| MunI | CAATTG | 2 cut(s) | 603, 4113 |
| Mva1269I | GAATGC | 3 cut(s) | 1073, 2581, 3755 |
| MvaI | CCWGG | 8 cut(s) | 1555, 2061, 2993, 3686, 3800, 4128, 4293, 4505 |
| MvnI | CGCG | 1 cut(s) | 646 |
| NaeI | GCCGGC | 1 cut(s) | 3468 |
| NciI | CCSGG | 2 cut(s) | 3648, 4039 |
| NcoI | CCATGG | 5 cut(s) | 904, 1723, 2407, 2549, 4364 |
| NgoMIV | GCCGGC | 1 cut(s) | 3466 |
| NlaIV | GGNNCC | 8 cut(s) | 7, 330, 1443, 1877, 1956, 2238, 4081, 4190 |
| NmuCI | GTSAC | 2 cut(s) | 4172, 4327 |
| NsiI | ATGCAT | 1 cut(s) | 4002 |
| NspI | RCATGY | 6 cut(s) | 213, 1256, 2205, 2282, 2377, 4004 |
| NspV | TTCGAA | 4 cut(s) | 1540, 3004, 4063, 4238 |
| OliI | CACNNNNGTG | 1 cut(s) | 1253 |
| PaeI | GCATGC | 2 cut(s) | 2205, 2282 |
| PaeR7I | CTCGAG | 1 cut(s) | 1288 |
| PagI | TCATGA | 1 cut(s) | 2830 |
| PciI | ACATGT | 2 cut(s) | 1252, 2373 |
| PciSI | GCTCTTC | 2 cut(s) | 162, 3456 |
| PctI | GAATGC | 3 cut(s) | 1073, 2581, 3755 |
| PdiI | GCCGGC | 1 cut(s) | 3468 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2402, 3321, 3972 |
| PfeI | GAWTC | 7 cut(s) | 1925, 2051, 2905, 3281, 3350, 4200, 4279 |
| PflFI | GACNNNGTC | 1 cut(s) | 4178 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2941, 3723 |
| PfoI | TCCNGGA | 2 cut(s) | 3798, 4037 |
| PinAI | ACCGGT | 2 cut(s) | 998, 4076 |
| PleI | GAGTC | 7 cut(s) | 259, 355, 901, 1280, 3508, 3847, 4615 |
| PpsI | GAGTC | 7 cut(s) | 259, 355, 901, 1280, 3508, 3847, 4615 |
| PpuMI | RGGWCCY | 3 cut(s) | 328, 1955, 4309 |
| PscI | ACATGT | 2 cut(s) | 1252, 2373 |
| PshBI | ATTAAT | 2 cut(s) | 1140, 3666 |
| PsiI | TTATAA | 1 cut(s) | 431 |
| Psp5II | RGGWCCY | 3 cut(s) | 328, 1955, 4309 |
| Psp6I | CCWGG | 8 cut(s) | 1553, 2059, 2991, 3684, 3798, 4126, 4291, 4503 |
| PspFI | CCCAGC | 1 cut(s) | 2897 |
| PspGI | CCWGG | 8 cut(s) | 1553, 2059, 2991, 3684, 3798, 4126, 4291, 4503 |
| PspN4I | GGNNCC | 8 cut(s) | 7, 330, 1443, 1877, 1956, 2238, 4081, 4190 |
| PspPI | GGNCC | 6 cut(s) | 328, 1955, 2107, 3674, 4309, 4408 |
| PspPPI | RGGWCCY | 3 cut(s) | 328, 1955, 4309 |
| PstI | CTGCAG | 1 cut(s) | 2182 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1754 |
| PsuI | RGATCY | 7 cut(s) | 5, 256, 525, 2301, 2347, 2429, 4459 |
| PsyI | GACNNNGTC | 1 cut(s) | 4178 |
| PvuII | CAGCTG | 2 cut(s) | 865, 1798 |
| RseI | CAYNNNNRTG | 5 cut(s) | 659, 1253, 2835, 3201, 3248 |
| SapI | GCTCTTC | 2 cut(s) | 162, 3456 |
| Sau96I | GGNCC | 6 cut(s) | 328, 1955, 2107, 3674, 4309, 4408 |
| ScaI | AGTACT | 2 cut(s) | 463, 4069 |
| SchI | GAGTC | 7 cut(s) | 260, 355, 902, 1280, 3509, 3847, 4615 |
| SduI | GDGCHC | 4 cut(s) | 548, 1444, 4084, 4537 |
| SfcI | CTRYAG | 3 cut(s) | 694, 2178, 3585 |
| Sfr274I | CTCGAG | 1 cut(s) | 1288 |
| SfuI | TTCGAA | 4 cut(s) | 1540, 3004, 4063, 4238 |
| SinI | GGWCC | 4 cut(s) | 328, 1955, 2107, 4309 |
| SlaI | CTCGAG | 1 cut(s) | 1288 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 659, 1253, 2835, 3201, 3248 |
| SmlI | CTYRAG | 7 cut(s) | 404, 1288, 1649, 3224, 3869, 4542, 4649 |
| SmoI | CTYRAG | 7 cut(s) | 404, 1288, 1649, 3224, 3869, 4542, 4649 |
| SphI | GCATGC | 2 cut(s) | 2205, 2282 |
| SsiI | CCGC | 4 cut(s) | 9, 12, 738, 3960 |
| SspI | AATATT | 3 cut(s) | 1181, 1791, 2645 |
| SspMI | CTAG | 3 cut(s) | 1047, 3285, 3368 |
| StyI | CCWWGG | 7 cut(s) | 904, 1723, 2407, 2549, 2763, 3504, 4364 |
| TaiI | ACGT | 3 cut(s) | 1099, 1118, 2387 |
| TaqII | GACCGA | 1 cut(s) | 2699 |
| TatI | WGTACW | 5 cut(s) | 461, 1275, 1774, 2370, 4067 |
| TauI | GCSGC | 2 cut(s) | 14, 3962 |
| TfiI | GAWTC | 7 cut(s) | 1925, 2051, 2905, 3281, 3350, 4200, 4279 |
| TseFI | GTSAC | 2 cut(s) | 4172, 4327 |
| TseI | GCWGC | 9 cut(s) | 203, 206, 865, 1054, 1579, 1795, 2211, 3956, 4055 |
| Tsp45I | GTSAC | 2 cut(s) | 4172, 4327 |
| TspGWI | ACGGA | 3 cut(s) | 1220, 3836, 4079 |
| Tth111I | GACNNNGTC | 1 cut(s) | 4178 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2941, 3723 |
| Vha464I | CTTAAG | 1 cut(s) | 3224 |
| VpaK11BI | GGWCC | 4 cut(s) | 328, 1955, 2107, 4309 |
| VspI | ATTAAT | 2 cut(s) | 1140, 3666 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 2673, 3213, 4316 |
| XbaI | TCTAGA | 1 cut(s) | 3284 |
| XceI | RCATGY | 6 cut(s) | 213, 1256, 2205, 2282, 2377, 4004 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 3692, 4156, 4299 |
| XhoI | CTCGAG | 1 cut(s) | 1288 |
| XmiI | GTMKAC | 3 cut(s) | 2805, 2987, 3069 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2402, 3321, 3972 |
| XspI | CTAG | 3 cut(s) | 1047, 3285, 3368 |
| ZraI | GACGTC | 1 cut(s) | 2385 |
| ZrmI | AGTACT | 2 cut(s) | 463, 4069 |
| Zsp2I | ATGCAT | 1 cut(s) | 4002 |