RNA binding
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 111 |
| AclWI | GGATC | 1 cut(s) | 380 |
| AcoI | YGGCCR | 1 cut(s) | 458 |
| AcsI | RAATTY | 3 cut(s) | 301, 335, 427 |
| AgsI | TTSAA | 5 cut(s) | 29, 233, 283, 308, 367 |
| AluBI | AGCT | 2 cut(s) | 286, 295 |
| AluI | AGCT | 2 cut(s) | 286, 295 |
| Alw26I | GTCTC | 1 cut(s) | 53 |
| AlwI | GGATC | 1 cut(s) | 380 |
| AoxI | GGCC | 1 cut(s) | 458 |
| ApeKI | GCWGC | 3 cut(s) | 40, 448, 451 |
| ApoI | RAATTY | 3 cut(s) | 301, 335, 427 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 152, 192 |
| AspLEI | GCGC | 1 cut(s) | 40 |
| AsuHPI | GGTGA | 1 cut(s) | 95 |
| BalI | TGGCCA | 1 cut(s) | 460 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 378, 410 |
| BbsI | GAAGAC | 2 cut(s) | 75, 355 |
| BbvI | GCAGC | 3 cut(s) | 27, 460, 463 |
| BccI | CCATC | 3 cut(s) | 52, 74, 316 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 372, 406 |
| BcoDI | GTCTC | 1 cut(s) | 53 |
| BisI | GCNGC | 3 cut(s) | 41, 449, 452 |
| BlsI | GCNGC | 3 cut(s) | 42, 450, 453 |
| BpiI | GAAGAC | 2 cut(s) | 75, 355 |
| BseMII | CTCAG | 1 cut(s) | 452 |
| BseXI | GCAGC | 3 cut(s) | 27, 460, 463 |
| BshFI | GGCC | 1 cut(s) | 460 |
| BsmAI | GTCTC | 1 cut(s) | 53 |
| BsnI | GGCC | 1 cut(s) | 460 |
| Bsp143I | GATC | 2 cut(s) | 87, 372 |
| BspACI | CCGC | 1 cut(s) | 111 |
| BspANI | GGCC | 1 cut(s) | 460 |
| BspCNI | CTCAG | 1 cut(s) | 451 |
| BspPI | GGATC | 1 cut(s) | 380 |
| BssMI | GATC | 2 cut(s) | 87, 372 |
| Bst4CI | ACNGT | 1 cut(s) | 7 |
| Bst6I | CTCTTC | 1 cut(s) | 143 |
| BstDEI | CTNAG | 1 cut(s) | 438 |
| BstHHI | GCGC | 1 cut(s) | 40 |
| BstKTI | GATC | 2 cut(s) | 90, 375 |
| BstMAI | GTCTC | 1 cut(s) | 53 |
| BstMBI | GATC | 2 cut(s) | 87, 372 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 292, 457 |
| BstV1I | GCAGC | 3 cut(s) | 27, 460, 463 |
| BstV2I | GAAGAC | 2 cut(s) | 75, 355 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 468 |
| BsuRI | GGCC | 1 cut(s) | 460 |
| BtgZI | GCGATG | 1 cut(s) | 90 |
| BtsI | GCAGTG | 1 cut(s) | 461 |
| BtsIMutI | CAGTG | 1 cut(s) | 461 |
| CfoI | GCGC | 1 cut(s) | 40 |
| CviJI | RGCY | 3 cut(s) | 286, 295, 460 |
| CviKI_1 | RGCY | 3 cut(s) | 286, 295, 460 |
| DdeI | CTNAG | 1 cut(s) | 438 |
| DpnI | GATC | 2 cut(s) | 89, 374 |
| DpnII | GATC | 2 cut(s) | 87, 372 |
| DraI | TTTAAA | 2 cut(s) | 51, 432 |
| EaeI | YGGCCR | 1 cut(s) | 458 |
| Eam1104I | CTCTTC | 1 cut(s) | 143 |
| EarI | CTCTTC | 1 cut(s) | 143 |
| FaiI | YATR | 4 cut(s) | 56, 177, 213, 276 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 300, 332 |
| Fnu4HI | GCNGC | 3 cut(s) | 41, 449, 452 |
| Fsp4HI | GCNGC | 3 cut(s) | 41, 449, 452 |
| GlaI | GCGC | 1 cut(s) | 39 |
| GluI | GCNGC | 3 cut(s) | 41, 449, 452 |
| HaeIII | GGCC | 1 cut(s) | 460 |
| HhaI | GCGC | 1 cut(s) | 40 |
| Hin6I | GCGC | 1 cut(s) | 38 |
| HinP1I | GCGC | 1 cut(s) | 38 |
| HinfI | GANTC | 4 cut(s) | 153, 218, 279, 479 |
| HphI | GGTGA | 1 cut(s) | 95 |
| Hpy166II | GTNNAC | 1 cut(s) | 172 |
| Hpy188I | TCNGA | 2 cut(s) | 342, 441 |
| Hpy188III | TCNNGA | 2 cut(s) | 298, 410 |
| Hpy8I | GTNNAC | 1 cut(s) | 172 |
| HpyAV | CCTTC | 3 cut(s) | 35, 122, 404 |
| HpyCH4III | ACNGT | 1 cut(s) | 7 |
| HpyCH4V | TGCA | 3 cut(s) | 200, 215, 448 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 292, 457 |
| HpyF3I | CTNAG | 1 cut(s) | 438 |
| HspAI | GCGC | 1 cut(s) | 38 |
| Kzo9I | GATC | 2 cut(s) | 87, 372 |
| LmnI | GCTCC | 2 cut(s) | 105, 300 |
| LpnPI | CCDG | 3 cut(s) | 210, 311, 395 |
| Lsp1109I | GCAGC | 3 cut(s) | 27, 460, 463 |
| MalI | GATC | 2 cut(s) | 89, 374 |
| MboI | GATC | 2 cut(s) | 87, 372 |
| MboII | GAAGA | 5 cut(s) | 80, 154, 157, 160, 355 |
| MfeI | CAATTG | 2 cut(s) | 228, 367 |
| MlsI | TGGCCA | 1 cut(s) | 460 |
| MluCI | AATT | 7 cut(s) | 228, 301, 335, 367, 376, 413, 427 |
| MluNI | TGGCCA | 1 cut(s) | 460 |
| Mox20I | TGGCCA | 1 cut(s) | 460 |
| MroXI | GAANNNNTTC | 2 cut(s) | 152, 192 |
| MscI | TGGCCA | 1 cut(s) | 460 |
| MseI | TTAA | 3 cut(s) | 50, 290, 431 |
| MslI | CAYNNNNRTG | 2 cut(s) | 402, 466 |
| Msp20I | TGGCCA | 1 cut(s) | 460 |
| MunI | CAATTG | 2 cut(s) | 228, 367 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 292, 457 |
| NdeII | GATC | 2 cut(s) | 87, 372 |
| NmeAIII | GCCGAG | 1 cut(s) | 330 |
| PdmI | GAANNNNTTC | 2 cut(s) | 152, 192 |
| PfeI | GAWTC | 4 cut(s) | 153, 218, 279, 479 |
| PkrI | GCNGC | 3 cut(s) | 42, 450, 453 |
| RseI | CAYNNNNRTG | 2 cut(s) | 402, 466 |
| SaqAI | TTAA | 3 cut(s) | 50, 290, 431 |
| SatI | GCNGC | 3 cut(s) | 41, 449, 452 |
| Sau3AI | GATC | 2 cut(s) | 87, 372 |
| SetI | ASST | 4 cut(s) | 242, 288, 297, 446 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 402, 466 |
| Sse9I | AATT | 7 cut(s) | 228, 301, 335, 367, 376, 413, 427 |
| SsiI | CCGC | 1 cut(s) | 111 |
| TaaI | ACNGT | 1 cut(s) | 7 |
| TaqI | TCGA | 3 cut(s) | 90, 243, 249 |
| TasI | AATT | 7 cut(s) | 228, 301, 335, 367, 376, 413, 427 |
| TfiI | GAWTC | 4 cut(s) | 153, 218, 279, 479 |
| Tru1I | TTAA | 3 cut(s) | 50, 290, 431 |
| Tru9I | TTAA | 3 cut(s) | 50, 290, 431 |
| TscAI | CASTG | 1 cut(s) | 461 |
| TseI | GCWGC | 3 cut(s) | 40, 448, 451 |
| TspDTI | ATGAA | 2 cut(s) | 348, 386 |
| TspRI | CASTG | 1 cut(s) | 461 |
| XapI | RAATTY | 3 cut(s) | 301, 335, 427 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 468 |
| XmnI | GAANNNNTTC | 2 cut(s) | 152, 192 |